View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15230_high_7 (Length: 291)
Name: NF15230_high_7
Description: NF15230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15230_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 4468849 - 4468586
Alignment:
| Q |
13 |
gagatgaattggtcgagattgacgttaggtcagtacctgcagtcactctgacgttcaagtcaatgattgagcaaagagtatgagatagaaagtggatata |
112 |
Q |
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| T |
4468849 |
gagatgaattggtcgagattgacgttaggtcagtacctgcagtcactctgacgttcaagtcaatgattgagcaaagagtatgagatagaaagtggatata |
4468750 |
T |
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| Q |
113 |
aattgacaaattgtgtaccttgcatttgtggtgaaagaagcatgtattttataggcactgacaaggagttgttagagactgacaaagggttcgttacata |
212 |
Q |
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| T |
4468749 |
aattgacaaattgtgtaccttgcatttgtggtgaaagaagcatgtattttataggcactgacaaggagttgttagagattgacaaagggttcgttacata |
4468650 |
T |
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| Q |
213 |
cgacgtttatcagtgttcagctccaacgactattacta-ctgttgggggtgttacacatgatca |
275 |
Q |
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| T |
4468649 |
ctacgtttatcagtgttcagctccaacgactattactagccgttgggggtgttacacatgatca |
4468586 |
T |
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