View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15230_low_9 (Length: 282)
Name: NF15230_low_9
Description: NF15230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15230_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 15 - 248
Target Start/End: Complemental strand, 48031995 - 48031762
Alignment:
| Q |
15 |
gaaacttggatcacccttttcaatccctttcgagtgtcaccactcaatcacttgaacgatgccttgggaacatatgtaatgaataacagaataaatgaat |
114 |
Q |
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| T |
48031995 |
gaaacttggatcacccttttcaatccctttcgagtgtcaccactcaatcacttgaacgatgccttgggaacatacgtaatgaataacagaataaatgaat |
48031896 |
T |
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| Q |
115 |
gagatctgatgaagcttttacatatttacattgataaggagggacattacgcatccatctctatataggaatgctttctccttgaatgatgataataaat |
214 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
48031895 |
gagatctgatgaagattttacatatttacattgataaggagggacattacgcatccatttctatataggaatgctttctccttgaatgatgataataaat |
48031796 |
T |
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| Q |
215 |
tggattaataaactcaataactgatcctacaaaa |
248 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
48031795 |
tggattaataaactcaataactgatcctacaaaa |
48031762 |
T |
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