View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15231_low_32 (Length: 284)
Name: NF15231_low_32
Description: NF15231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15231_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 41547293 - 41547029
Alignment:
| Q |
1 |
atggaattgagttcaatatgtgtgatcaaataaatgtttggttagattgctaggtaggtagcttggcctggaacgtgattttcctgttttattgaagcat |
100 |
Q |
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| T |
41547293 |
atggaattgagttcaatatgtgtgatcaaataaatgtttggttagattgctaggtaggtagcttggcctggaacgtgattttcctgttttattgaagcat |
41547194 |
T |
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| Q |
101 |
gtagtaggcagtattttataatttctttgaacttgtgaggctactagtaatggaacaagacctcattgatgaaatcatatatactccaaggttaaattag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41547193 |
gtagtaggcagtattttataatttctttgaacttgtgaggctactagtaatggaacaagacctcattgatgaaatcatatatactccaaggttaaattag |
41547094 |
T |
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| Q |
201 |
taagtggtccctataatttctttacactatattgatattgtatgtatactttaagcacaccttat |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41547093 |
taagtggtccctataatttctttacactatattgatattgtatgtatactttaagcacaccttat |
41547029 |
T |
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