View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15231_low_49 (Length: 214)

Name: NF15231_low_49
Description: NF15231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15231_low_49
NF15231_low_49
[»] scaffold0440 (1 HSPs)
scaffold0440 (23-171)||(1121-1269)
[»] chr8 (19 HSPs)
chr8 (23-113)||(42992989-42993079)
chr8 (27-116)||(9935367-9935455)
chr8 (23-116)||(1882734-1882827)
chr8 (23-116)||(32890973-32891065)
chr8 (23-116)||(32897097-32897189)
chr8 (23-116)||(39727300-39727395)
chr8 (23-116)||(7771316-7771408)
chr8 (23-116)||(14799399-14799491)
chr8 (23-116)||(10705927-10706020)
chr8 (23-117)||(14418025-14418115)
chr8 (23-116)||(5542143-5542235)
chr8 (27-117)||(36819059-36819148)
chr8 (30-111)||(1171414-1171493)
chr8 (24-116)||(24250188-24250278)
chr8 (23-116)||(39735531-39735627)
chr8 (62-116)||(10700132-10700186)
chr8 (52-109)||(22219706-22219762)
chr8 (59-116)||(39689782-39689838)
chr8 (23-90)||(31379430-31379497)
[»] chr7 (15 HSPs)
chr7 (23-116)||(42767277-42767370)
chr7 (23-116)||(351870-351962)
chr7 (23-116)||(3817294-3817386)
chr7 (23-116)||(12804084-12804176)
chr7 (23-116)||(339455-339547)
chr7 (23-116)||(3811152-3811244)
chr7 (23-116)||(28420942-28421034)
chr7 (23-116)||(35147986-35148079)
chr7 (23-116)||(20239035-20239127)
chr7 (23-116)||(5979156-5979249)
chr7 (24-116)||(5849610-5849702)
chr7 (55-116)||(22741901-22741961)
chr7 (23-111)||(26381153-26381239)
chr7 (23-118)||(26383710-26383808)
chr7 (23-94)||(43540069-43540140)
[»] chr6 (15 HSPs)
chr6 (23-122)||(32035263-32035361)
chr6 (23-116)||(21190849-21190941)
chr6 (23-116)||(31756196-31756290)
chr6 (23-116)||(4580304-4580396)
chr6 (23-116)||(8650786-8650878)
chr6 (23-116)||(8662764-8662856)
chr6 (24-116)||(21197004-21197095)
chr6 (23-116)||(21782736-21782828)
chr6 (23-116)||(25354295-25354388)
chr6 (24-116)||(18778668-18778760)
chr6 (23-111)||(17581710-17581797)
chr6 (23-116)||(6098061-6098158)
chr6 (24-110)||(21770546-21770632)
chr6 (24-115)||(6102708-6102803)
chr6 (23-116)||(25343708-25343805)
[»] chr1 (13 HSPs)
chr1 (23-117)||(50306273-50306366)
chr1 (24-116)||(44410095-44410186)
chr1 (23-116)||(1078308-1078400)
chr1 (23-112)||(34740070-34740158)
chr1 (23-117)||(25381517-25381610)
chr1 (23-116)||(24963685-24963777)
chr1 (23-116)||(25387487-25387579)
chr1 (24-116)||(24926738-24926828)
chr1 (23-116)||(27955245-27955336)
chr1 (23-116)||(31058128-31058220)
chr1 (23-92)||(38151981-38152050)
chr1 (24-116)||(12183562-12183658)
chr1 (23-82)||(31051628-31051687)
[»] chr4 (17 HSPs)
chr4 (23-116)||(4632871-4632963)
chr4 (24-116)||(26956812-26956903)
chr4 (24-116)||(26963324-26963415)
chr4 (23-116)||(24288071-24288161)
chr4 (23-116)||(50168677-50168769)
chr4 (23-117)||(33458248-33458342)
chr4 (23-116)||(6257188-6257280)
chr4 (23-116)||(10733229-10733321)
chr4 (23-116)||(10739322-10739414)
chr4 (23-116)||(10946998-10947090)
chr4 (23-116)||(10953091-10953183)
chr4 (24-116)||(48161044-48161132)
chr4 (24-116)||(48167263-48167351)
chr4 (25-111)||(34308060-34308144)
chr4 (27-116)||(49976675-49976763)
chr4 (23-116)||(33461380-33461468)
chr4 (37-94)||(50156043-50156100)
[»] chr2 (14 HSPs)
chr2 (23-116)||(28682928-28683020)
chr2 (23-116)||(36750499-36750591)
chr2 (23-111)||(35090637-35090724)
chr2 (23-116)||(30965412-30965505)
chr2 (23-116)||(31002461-31002554)
chr2 (23-116)||(31008439-31008532)
chr2 (27-110)||(35084665-35084747)
chr2 (23-116)||(11048536-11048628)
chr2 (23-116)||(35438693-35438784)
chr2 (26-116)||(13456187-13456276)
chr2 (26-116)||(13462128-13462217)
chr2 (23-111)||(13149674-13149761)
chr2 (23-117)||(23343645-23343738)
chr2 (23-116)||(44716787-44716880)
[»] chr3 (22 HSPs)
chr3 (23-116)||(28964952-28965042)
chr3 (23-116)||(10238195-10238287)
chr3 (23-116)||(10244317-10244409)
chr3 (23-116)||(17055775-17055868)
chr3 (23-116)||(30051085-30051177)
chr3 (23-116)||(49151696-49151788)
chr3 (23-116)||(49157763-49157855)
chr3 (23-118)||(48128028-48128122)
chr3 (23-113)||(55003398-55003487)
chr3 (23-116)||(10760633-10760725)
chr3 (23-116)||(10766854-10766946)
chr3 (23-116)||(11839708-11839800)
chr3 (23-116)||(11846046-11846138)
chr3 (23-110)||(53069043-53069129)
chr3 (23-116)||(8331871-8331963)
chr3 (26-116)||(42191203-42191292)
chr3 (26-116)||(42197145-42197234)
chr3 (23-112)||(17593268-17593357)
chr3 (23-116)||(38449048-38449138)
chr3 (23-116)||(38455535-38455625)
chr3 (23-116)||(24643534-24643627)
chr3 (30-116)||(13445142-13445227)
[»] chr5 (17 HSPs)
chr5 (23-116)||(28525369-28525461)
chr5 (23-116)||(28531465-28531557)
chr5 (23-116)||(32096943-32097036)
chr5 (25-116)||(30384359-30384451)
chr5 (23-118)||(32094140-32094235)
chr5 (23-116)||(7389531-7389623)
chr5 (23-116)||(12686162-12686254)
chr5 (23-116)||(12692264-12692356)
chr5 (23-107)||(24054419-24054502)
chr5 (23-116)||(16215157-16215249)
chr5 (24-116)||(41297362-41297453)
chr5 (23-110)||(14610233-14610321)
chr5 (23-116)||(19059747-19059839)
chr5 (30-115)||(19066091-19066175)
chr5 (34-116)||(30772379-30772460)
chr5 (55-110)||(8706454-8706508)
chr5 (24-94)||(26316796-26316866)
[»] scaffold0236 (1 HSPs)
scaffold0236 (23-116)||(5619-5711)
[»] scaffold0363 (1 HSPs)
scaffold0363 (23-117)||(604-694)
[»] scaffold0012 (1 HSPs)
scaffold0012 (27-116)||(172873-172961)
[»] scaffold0208 (2 HSPs)
scaffold0208 (23-116)||(6607-6699)
scaffold0208 (24-116)||(12481-12572)
[»] scaffold1114 (1 HSPs)
scaffold1114 (52-116)||(1198-1261)
[»] scaffold0085 (1 HSPs)
scaffold0085 (24-112)||(38513-38600)


Alignment Details
Target: scaffold0440 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 1269 - 1121
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacacactat 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1269 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacatgttttatgaaatctgtttttaattaagacctaaatttccaacacactat 1170  T
Q  123 tctcctcttccattggatataaattctcaacacccaaacatgggcagga 171  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1169 tctcctcttccattgaatataaattctcaacacccaaacatgggcagga 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 42993079 - 42992989
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttcca 113  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  42993079 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttcca 42992989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 9935367 - 9935455
Alignment:
Q  27 ttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  9935367 ttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 9935455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 1882827 - 1882734
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||    
T  1882827 catgttcaatgttttgtttgcttccgctattgattcttaattgttgaacatgttctatgaaatctgttttatattaagacctaaatttccaaca 1882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 32890973 - 32891065
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  32890973 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 32891065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 32897097 - 32897189
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  32897097 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 32897189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 39727395 - 39727300
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgttttta--attaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||    
T  39727395 catgttcaatgttttgtttgcttccgttattgattcataattgttgaacatgttttatgaaatctatttttattattaagacctaaatttccaaca 39727300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 7771316 - 7771408
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  7771316 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 7771408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 14799491 - 14799399
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||| ||||| | ||||||||||||||||||||||    
T  14799491 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttat-attaagacctaaatttccaaca 14799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 10705927 - 10706020
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||| |||  |||||| |  |||||| |||| || ||||||||||||||||||||||||||||||||||||||||    
T  10705927 catgttcaatgttttgtttgcttacgctattgatttacgattgttaaacatgtattatgaaatctgtttttaattaagacctaaatttccaaca 10706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 14418025 - 14418115
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    |||||||||||||||||||||||||||  ||||||||||   ||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  14418025 catgttcaatgttttgtttgcttccgctattgattcata---gttaaacatgttttatgaaatctgttttt-attaagacctaaatttccaacac 14418115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 5542235 - 5542143
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || |||| |||||| ||| | ||||| ||||||||||||||||    
T  5542235 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattataaaatctatttat-attaaaacctaaatttccaaca 5542143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 36819059 - 36819148
Alignment:
Q  27 ttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||| || |||||| || ||||| | |||||||||||||||||||||||    
T  36819059 ttcaatgttttgtttgcttccactattgattcataattgttgaacatgtattatgagatttgtttat-attaagacctaaatttccaacac 36819148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 1171414 - 1171493
Alignment:
Q  30 aatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttc 111  Q
    ||||||||||||||||||||  |||| |||||||||||||| | |||| ||||||||||||||  |||||||||||||||||    
T  1171414 aatgttttgtttgcttccgcggttgaatcataattgttgaatatgtttcatgaaatctgtttt--attaagacctaaatttc 1171493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 24250188 - 24250278
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||| ||||||||| ||||||  |||||||||| ||||| |||| |||||||||||| |||||||  ||||||||||||||| |||||    
T  24250188 atgttcaatattttgtttgtttccgctattgattcatatttgttcaacatgttttatgaaatatgttttt--ttaagacctaaattttcaaca 24250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 39735627 - 39735531
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgttttta--att-aagacctaaatttccaaca 116  Q
    |||||||||| |||| ||| |||||||  ||||||||||||||||||||| |||||||||||||| ||||||  ||| || ||||||||||||||||    
T  39735627 catgttcaatattttatttacttccgctattgattcataattgttgaacatgttttatgaaatctatttttattattaaaaacctaaatttccaaca 39735531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 10700132 - 10700186
Alignment:
Q  62 attgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||| |||| || ||||||||| ||||||||||||||||||||||||||||||    
T  10700132 attgttaaacatgtattatgaaatatgtttttaattaagacctaaatttccaaca 10700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 22219762 - 22219706
Alignment:
Q  52 ttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatt 109  Q
    ||||||||||| | ||||||| |||||||||||||| ||||| |||||||||||||||    
T  22219762 ttgattcataactattgaacatgttttatgaaatctcttttt-attaagacctaaatt 22219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 39689782 - 39689838
Alignment:
Q  59 ataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||| | |||||||    
T  39689782 ataattgttgaacatgttttatgaaatctgttttt-attaaaacctaagtctccaaca 39689838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 31379497 - 31379430
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtt 90  Q
    ||||||||||||||| ||||| |||| | ||||||||||||| || |||| || ||||||||| ||||    
T  31379497 catgttcaatgttttatttgcctccgtcattgattcataattattaaacatgtgttatgaaatttgtt 31379430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 42767370 - 42767277
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  42767370 catgttcaatattttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaaca 42767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 351870 - 351962
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  351870 catgttcaatgttttgtttgcttccgctgttgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttccaaca 351962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 3817386 - 3817294
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  3817386 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 3817294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 12804084 - 12804176
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||| ||||||||||  |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  12804084 catgttcaatgttttgcttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 12804176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 339455 - 339547
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||| | ||||||| ||||||||||||||    
T  339455 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctctttat-attaagagctaaatttccaaca 339547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 3811244 - 3811152
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||| ||||||||||    
T  3811244 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctacatttccaaca 3811152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28421034 - 28420942
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||| | || |||| ||||||||||||||    
T  28421034 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaaca 28420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 35148079 - 35147986
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacct-aaatttccaaca 116  Q
    |||||||||||||||||||||||||||  | |||| |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||    
T  35148079 catgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttatgaaatctgttttt-attaagacataaaatttccaaca 35147986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 20239035 - 20239127
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||  || ||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||    
T  20239035 catgttcaatgttttgtttgcttccgctattgatgtatgattgttgaacatgttttatgaaatttgtttat-attaagacctaaatttccaaca 20239127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 5979249 - 5979156
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||  ||||||||||| |||  |||||| |  |||||| |||| || |||||||||||||||||||||||||||||||||| |||||    
T  5979249 catgttcaatagtttgtttgctttcgctattgatttacgattgttcaacatgtattatgaaatctgtttttaattaagacctaaattttcaaca 5979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 5849610 - 5849702
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaaca-cgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| ||||||||||  ||||||||||||  |||||||   |||||| |||| ||||||| |||||||||||||||| |||||    
T  5849610 atgttcaatgttttggttgcttccgctattgattcataatcattgaacataattttataaaatttgttttt-attaagacctaaatttgcaaca 5849702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 22741961 - 22741901
Alignment:
Q  55 attcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||| ||||||||||| ||||| || ||| ||||||||||||||||||    
T  22741961 attcataattgttgaacatgttttatgaaacctgttctt-attgagacctaaatttccaaca 22741901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 26381153 - 26381239
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttc 111  Q
    |||||||||| || |||||| || | || ||||||||||||||||||||| || ||||||||||| ||||  ||| |||||||||||||    
T  26381153 catgttcaatattgtgtttgttttcccccttgattcataattgttgaacatgtcttatgaaatctatttt--atttagacctaaatttc 26381239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 26383710 - 26383808
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtt---tttaattaagacctaaatttccaacaca 118  Q
    |||||||||| ||||||||| ||| |   ||||||||||||||||||||| || ||||||||||| ||   ||| ||| |||| |||||||||||||||    
T  26383710 catgttcaatattttgtttgtttctgttgttgattcataattgttgaacatgtcttatgaaatctattctgttttatttagacttaaatttccaacaca 26383808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 43540069 - 43540140
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgttttta 94  Q
    |||||||||| |||| |||  ||||||  ||||||||||||| ||||||| ||| |||||||||||||||||    
T  43540069 catgttcaatattttatttaattccgctattgattcataattattgaacatgttctatgaaatctgttttta 43540140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 6e-33; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 32035361 - 32035263
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacacactat 122  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||    
T  32035361 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttccaacagactat 32035263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 21190941 - 21190849
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||    
T  21190941 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaatctgtttataa-taagacctaaatttccaaca 21190849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 31756290 - 31756196
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgt-ttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  31756290 catgttcaatgttttatttgcttccgttgttgattcataattgttgaacatgttttatgaaatctgtttttttattaagacctaaatttccaaca 31756196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 4580396 - 4580304
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  4580396 catgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 4580304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 8650878 - 8650786
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||| |||||    
T  8650878 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttacaaca 8650786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 8662856 - 8662764
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||| |||||    
T  8662856 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttacaaca 8662764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 21197095 - 21197004
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||| | || |||||||||||||||||    
T  21197095 atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-actatgacctaaatttccaaca 21197004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 21782828 - 21782736
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || ||||||||||||||| | ||||||||||||||||| ||||    
T  21782828 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttctaaca 21782736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 25354295 - 25354388
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||| |||||||||||||||  |||||| |  ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  25354295 catgttcaatgctttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagatctaaatttccaaca 25354388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 18778668 - 18778760
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacg-ttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||| |||||||||||||||||  ||||||||||||| ||||||| | ||||||||||| || |||||||||||||||||||||||||||    
T  18778668 atgttcaacgttttgtttgcttccgctattgattcataattattgaacatgtttttatgaaatttg-ttttaattaagacctaaatttccaaca 18778760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 17581710 - 17581797
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttc 111  Q
    |||||||||||||||||||||||||||  | |||||||||| |||||||| |||||||||| | ||||||| ||| ||| |||||||||    
T  17581710 catgttcaatgttttgtttgcttccgctatcgattcataatagttgaacatgttttatgaattatgttttt-atttagatctaaatttc 17581797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 6098061 - 6098158
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcc-tttgattcataattgttg---aacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||| | |||||||  ||||||||||||||||||   |||| |||||||||||| ||||||| |||||||||||| ||| |||||    
T  6098061 catgttcaatgttttgtctacttccgctatttgattcataattgttgttgaacatgttttatgaaatttgttttttattaagacctaagttttcaaca 6098158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 21770632 - 21770546
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaattt 110  Q
    |||||||||||||||||| ||||| |  || ||| |  |||||||| || || ||||||||||||||||||||||||||||||||||    
T  21770632 atgttcaatgttttgtttacttcctctattaatttacgattgttgatcatgtattatgaaatctgtttttaattaagacctaaattt 21770546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 6102708 - 6102803
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcc-tttgattcataattgttg---aacacgttttatgaaatctgtttttaattaagacctaaatttccaac 115  Q
    |||||||||||||||| |||||||||  |||||||||| |||||||   ||||  ||||||||||| ||||||| || ||||||||||||||||||    
T  6102708 atgttcaatgttttgtctgcttccgctatttgattcatgattgttgttgaacatattttatgaaatatgttttttatgaagacctaaatttccaac 6102803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 25343708 - 25343805
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacg----ttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||| ||  |||||| |  ||||||||||| |    | ||||||||| |||||||||||||||  |||||||||||||    
T  25343708 catgttcaatgttttgtttgcttctgctattgatttacgattgttgaacatgcatgtattatgaaatttgtttttaattaagatataaatttccaaca 25343805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 2e-32; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 50306273 - 50306366
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  50306273 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttccaacac 50306366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 44410095 - 44410186
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  44410095 atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-agtaagacctaaatttccaaca 44410186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 1078308 - 1078400
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  1078308 catgttcaatgttttgtttgcttccgctattgattaataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 1078400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 34740070 - 34740158
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttcc 112  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||||| | ||||||||||||||||||    
T  34740070 catgttcaatgttttgtttgcttccgctattgattcataattgatgaacatgttttatgaaatctgtttat-attaagacctaaatttcc 34740158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 25381610 - 25381517
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||| || ||||||||||||||| | ||||||||||| |||||||||||    
T  25381610 catgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttat-attaagacctatatttccaacac 25381517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 24963777 - 24963685
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||||||| | |||||||| |||||||||||||||||||| ||||||| |||||||| |||||    
T  24963777 catgttcaatgttttgtttgcttccgctattgattcatattcgttgaacatgttttatgaaatctgttttt-attaagatctaaattttcaaca 24963685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 25387579 - 25387487
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||| | ||||||| ||| ||||||||||    
T  25387579 catgttcaatgttttgtttgcttccgctattgattcatatttgttgaacatgttttatgaaatctgtttat-attaagatctatatttccaaca 25387487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 24926828 - 24926738
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| ||||||||||  |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| |||||    
T  24926828 atgttcaatgttttggttgcttccgctattgattcataatcgttgaacatgttttatg-aatctgttttt-attaagacctaaattttcaaca 24926738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 27955245 - 27955336
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| || ||| || |||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  27955245 catgttcaatgttttgtttgcttccgctattgatt-atgattattaaacatgttttatgaaatctgttttt-attaagacctaaatttctaaca 27955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 31058128 - 31058220
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |  ||||||||||| || ||||||||||||||| | ||||||||||||||||| ||||    
T  31058128 catgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttctaaca 31058220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 38152050 - 38151981
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttt 92  Q
    |||||||||| ||||||||||||||||  |||||| |||||||||||||| |||||||||||||| ||||    
T  38152050 catgttcaatattttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctatttt 38151981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 12183658 - 12183562
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcata-----attgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||| |||||||||||||| |  ||||||||||     |||||||||||  ||||||||||||| ||||| ||||||| ||||||||||||||    
T  12183658 atgttcaatattttgtttgcttccactattgattcataattatattgttgaacatattttatgaaatctattttt-attaagaactaaatttccaaca 12183562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 31051628 - 31051687
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatga 82  Q
    |||||||||||||||||||||||||||  |||||| |  ||||||||||| || ||||||    
T  31051628 catgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatga 31051687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 4632871 - 4632963
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  4632871 catgttcaatgttttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 4632963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 26956903 - 26956812
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||| |||||||||||  |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26956903 atgttcaatgttttatttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttt-attaagacctaaatttccaaca 26956812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 26963415 - 26963324
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  26963415 atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatttgttttt-attaagacctaaatttccaaca 26963324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 24288071 - 24288161
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||||||||    
T  24288071 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctattt---attaagacctaaatttccaaca 24288161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 50168677 - 50168769
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||  |||||||| |||||| |||| ||||||||||||||||||||||    
T  50168677 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacgtgttttatgtaatctggtttt-attaagacctaaatttccaaca 50168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 33458342 - 33458248
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    |||||||||| ||||||||||||||||  |||||| |  |||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  33458342 catgttcaatattttgtttgcttccgctattgatttacgattgttgaacatatattatgaaatctgtttttaattaagacctaaatttccaacac 33458248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 6257280 - 6257188
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| || ||||||||||| || ||||||||||| ||| | ||||||||||||||||||||||    
T  6257280 catgttcaatgttttgtttgcttccgctgttgatttatgattgttgaacatgtattatgaaatctatttat-attaagacctaaatttccaaca 6257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10733321 - 10733229
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||| |||||||||||||||||| |  |||||| |||||| |||||||    
T  10733321 catgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-gttaagagctaaatgtccaaca 10733229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10739414 - 10739322
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||| |  |||||| |||||| |||||||    
T  10739414 catgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttat-gttaagagctaaatgtccaaca 10739322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10947090 - 10946998
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||| |||||||||||||||||| |  |||||| |||||| |||||||    
T  10947090 catgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-gttaagagctaaatgtccaaca 10946998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10953183 - 10953091
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||| |  |||||| |||||| |||||||    
T  10953183 catgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttat-gttaagagctaaatgtccaaca 10953091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 48161044 - 48161132
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||||  ||||||||||   ||||||||  ||||||||||||| ||||| ||||||||||||||||| ||||    
T  48161044 atgttcaatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctattttt-attaagacctaaatttctaaca 48161132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 48167263 - 48167351
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||||  ||||||||||   ||||||||  ||||||||||||| ||||| ||||||||||||||||| ||||    
T  48167263 atgttcaatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctattttt-attaagacctaaatttctaaca 48167351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 34308144 - 34308060
Alignment:
Q  25 tgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttc 111  Q
    |||||||| |||||| |||||||||  ||||||||||||| ||||||| ||||||| |||||||||||  |||||||| ||||||||    
T  34308144 tgttcaatattttgtatgcttccgctattgattcataattattgaacatgttttataaaatctgtttt--attaagacgtaaatttc 34308060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 49976675 - 49976763
Alignment:
Q  27 ttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||| |||  | ||||||||||||||||| | |||||||||||| ||||||| ||||| | ||||||||| ||||    
T  49976675 ttcaatgttttgtttgctttcgctatcgattcataattgttgaatatgttttatgaaatttgttttt-attaaaatctaaatttctaaca 49976763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 33461468 - 33461380
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||| |  |||||| |  |||||||||||     ||| |||| |||||||||||||||  |||||||| ||||    
T  33461468 catgttcaatgttttgtttgcttccactattgatttacgattgttgaaca-----tataaaatatgtttttaattaagatttaaatttctaaca 33461380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 50156043 - 50156100
Alignment:
Q  37 tgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgttttta 94  Q
    ||||| |||||||  ||||||||||||||||||||| |||||||  |||||| |||||    
T  50156043 tgtttacttccgctattgattcataattgttgaacatgttttatataatctggtttta 50156100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28683020 - 28682928
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  28683020 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttccaaca 28682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 36750499 - 36750591
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  36750499 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacttaaatttccaaca 36750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 35090724 - 35090637
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttc 111  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  35090724 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaatttc 35090637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 30965412 - 30965505
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||| ||||||||||||||||  |||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  30965412 catgttcaatattttgtttgcttccgctattgatttatgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttctaaca 30965505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 31002461 - 31002554
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||| ||||||||||||||||  |||||| |  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  31002461 catgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaaca 31002554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 31008439 - 31008532
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||| ||||||||||||||||  |||||| |  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  31008439 catgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaaca 31008532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 35084747 - 35084665
Alignment:
Q  27 ttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaattt 110  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  35084747 ttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagacctaaattt 35084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 11048628 - 11048536
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||||||    
T  11048628 catgttcaatgttttgtttgcttcagctattgattcataattgttggacatgttttatgaaatttatttttaa-taagacctaaatttccaaca 11048536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 35438784 - 35438693
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| |||||||||||  ||||||||||| ||||||||| |||||||||||| ||||||  |||||| |||||||||||||||    
T  35438784 catgttcaatgttttatttgcttccgctattgattcataactgttgaacatgttttatgaaatttgtttt--attaaggcctaaatttccaaca 35438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 13456187 - 13456276
Alignment:
Q  26 gttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| || ||||||||||| ||| | ||||||||||| ||||||||||    
T  13456187 gttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaaca 13456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 13462128 - 13462217
Alignment:
Q  26 gttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| || ||||||||||| ||| | ||||||||||| ||||||||||    
T  13462128 gttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaaca 13462217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 13149761 - 13149674
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttc 111  Q
    |||||||||||||||||||||||||||  |||||| |  ||||||||||| || ||||||||||||||| | |||||||||||||||||    
T  13149761 catgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttc 13149674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 23343645 - 23343738
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    |||||||||||||||||||||||||||  ||||||| |||| |||||||| |||||||||||||| || || || |||| ||||||||| |||||    
T  23343645 catgttcaatgttttgtttgcttccgctgttgattcgtaatcgttgaacatgttttatgaaatctcttctt-atcaagatctaaatttcaaacac 23343738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 44716880 - 44716787
Alignment:
Q  23 catgttcaatgttttgttt-gcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| ||| ||||||||  |||||| ||||  |||||||| ||||||||| |||||||||| ||||||||||||||||| ||||    
T  44716880 catgttcaatgttttcttttgcttccgctattgattgataaccgttgaacatgttttatgatatctgttttt-attaagacctaaatttctaaca 44716787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 28964952 - 28965042
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28964952 catgttcaatgttttgtttgcttccgctattgattcat---tgttgaacatgttttatgaaatctgtttttaattaagacctaaatttccaaca 28965042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10238287 - 10238195
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  10238287 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttccaaca 10238195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10244409 - 10244317
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  10244409 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-attaagagctaaatttccaaca 10244317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 17055868 - 17055775
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||| ||||    
T  17055868 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaaactgttttttattaagacctaaatttcgaaca 17055775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 30051177 - 30051085
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  30051177 catgttcaatattttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacctaaattttcaaca 30051085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 49151696 - 49151788
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  49151696 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 49151788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 49157763 - 49157855
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  49157763 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 49157855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 48128122 - 48128028
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacaca 118  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||    
T  48128122 catgttcaatgttttgtttgtttccgctattgattcataattgttgaacatgtttcatgaaatctgttttt-attgagacctaaatttccaacaca 48128028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 55003487 - 55003398
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttcca 113  Q
    ||||||||||||||| |||||||| ||  ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  55003487 catgttcaatgttttatttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttttt-attaagacctaaatttcca 55003398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10760725 - 10760633
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| |||||||||||  |||||| |||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  10760725 catgttcaatgttttatttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttttaa-taagacctaaatttccaaca 10760633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10766946 - 10766854
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || ||||||||| ||||||||| ||||||||||||||||||||    
T  10766946 catgttcaatgttttgtttgcttccgctgttgatttataattgttgaacatgtattatgaaatttgtttttaa-taagacctaaatttccaaca 10766854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 11839800 - 11839708
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || | ||||||||||||| | ||||||||||||||||||||||    
T  11839800 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtatcatgaaatctgtttat-attaagacctaaatttccaaca 11839708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 11846138 - 11846046
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || |||| ||||||| |||||||||||||||||||||||||||    
T  11846138 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattataaaatctg-ttttaattaagacctaaatttccaaca 11846046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 53069129 - 53069043
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaattt 110  Q
    |||||||||||||||||||||||||||  | |||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  53069129 catgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttataaaatctgttttt-attaagacctaaattt 53069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 8331871 - 8331963
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||| |||||| ||| | ||||||| ||||||||||||||    
T  8331871 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttataaaatctatttat-attaagagctaaatttccaaca 8331963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 42191292 - 42191203
Alignment:
Q  26 gttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| || ||||||||||| ||| | ||||||||||| ||||||||||    
T  42191292 gttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaaca 42191203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 42197234 - 42197145
Alignment:
Q  26 gttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| || ||||||||||| ||| | ||||||||||| ||||||||||    
T  42197234 gttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttat-attaagacctatatttccaaca 42197145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 17593357 - 17593268
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttcc 112  Q
    |||||||||||||||||||||||||||  |||||| |  |||||||||||  | ||||||||| | ||||||||||||||||||||||||    
T  17593357 catgttcaatgttttgtttgcttccgcgattgatttacgattgttgaacatctattatgaaatatatttttaattaagacctaaatttcc 17593268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 38449138 - 38449048
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || ||||||||||   |||  ||||||||| ||||||||||||    
T  38449138 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatc---tttatattaagaccgaaatttccaaca 38449048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 38455625 - 38455535
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| || ||||||||||   |||  ||||||||| ||||||||||||    
T  38455625 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatc---tttatattaagaccgaaatttccaaca 38455535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 24643627 - 24643534
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttt--tatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||| ||| |||||||  ||||||||||| ||||||||| ||||  |||||| | ||||||  ||||||||||||||||||||||    
T  24643627 catgttcaatgttttatttacttccgctattgattcataaatgttgaacatgttttatatgaagtttgtttt--attaagacctaaatttccaaca 24643534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 13445142 - 13445227
Alignment:
Q  30 aatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||| |||||||||||  |||||| |||||||||||||| ||| ||| |||||| ||||| ||| ||||||||||||| ||||    
T  13445142 aatgttttatttgcttccgctattgatttataattgttgaacatgttctatcaaatctattttt-atttagacctaaatttctaaca 13445227  T

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Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28525461 - 28525369
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  28525461 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 28525369  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28531557 - 28531465
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||    
T  28531557 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttat-attaagacctaaatttccaaca 28531465  T

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Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 32097036 - 32096943
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  32097036 catgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaaca 32096943  T

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Target: chr5; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 30384451 - 30384359
Alignment:
Q  25 tgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgt-ttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||||    
T  30384451 tgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttttattaaaacctaaatttccaaca 30384359  T

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Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 32094235 - 32094140
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacaca 118  Q
    |||||||||||||||||||||||||||  |||||| |  ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||    
T  32094235 catgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattataaaatctgtttttaattaagacctaaatttccaacaca 32094140  T

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Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 7389623 - 7389531
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||| ||||| | ||||||||||||||||||||||    
T  7389623 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttat-attaagacctaaatttccaaca 7389531  T

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Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 12686254 - 12686162
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||| | || |||| ||||||||||||||    
T  12686254 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaaca 12686162  T

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Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 12692356 - 12692264
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||| | || |||| ||||||||||||||    
T  12692356 catgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaaca 12692264  T

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Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 24054419 - 24054502
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaa 107  Q
    |||||||||||||||||||||||||||  | |||| |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  24054419 catgttcaatgttttgtttgcttccgctatagatttataattgttgaacatgttttatgaaatctgttttt-attaagacctaaa 24054502  T

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Target: chr5; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 16215249 - 16215157
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||| | || ||||||||||||||||| || |||||||||||||| ||||    
T  16215249 catgttaaatgttttgtttgcttccgctattgattcataattgttgaatatgtgttatgaaatctgttttt-ataaagacctaaatttctaaca 16215157  T

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Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 41297362 - 41297453
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||| || ||||||||||| ||| | ||||||||| ||||||||||||    
T  41297362 atgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgtattatgaaatctctttat-attaagacccaaatttccaaca 41297453  T

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Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 14610233 - 14610321
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctg-tttttaattaagacctaaattt 110  Q
    ||||||||||| ||| |||||||||||  || |||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||    
T  14610233 catgttcaatggtttatttgcttccgctattaattcataattgttgaacatgttttatgaaatctgtttttttgttaagacctaaattt 14610321  T

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Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 19059839 - 19059747
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||| ||| |||||||||||||| |   ||||| ||||| |||||| |||||||||||||| ||||||| ||||||||||||||||||||||    
T  19059839 catgtttaatattttgtttgcttcccctaatgatttataatcgttgaatacgttttatgaaatatgttttt-attaagacctaaatttccaaca 19059747  T

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Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 19066175 - 19066091
Alignment:
Q  30 aatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaac 115  Q
    ||||||||||||||||||||   ||||| ||||| |||||||| | |||||||||| ||||||| |||||||| ||||||||||||    
T  19066175 aatgttttgtttgcttccgctaatgatttataatcgttgaacatggtttatgaaatatgttttt-attaagacttaaatttccaac 19066091  T

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Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 30772379 - 30772460
Alignment:
Q  34 ttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||| |  || |||||||||| ||||||| |||||||||||| | ||||| ||||||| ||||||||||||||    
T  30772379 ttttgtttgcttccactgtttattcataattattgaacatgttttatgaaatttattttt-attaagaactaaatttccaaca 30772460  T

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Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 8706508 - 8706454
Alignment:
Q  55 attcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaattt 110  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  8706508 attcataattgttgaacatattttatgaaatctattttt-attaagacctaaattt 8706454  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 26316866 - 26316796
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgttttta 94  Q
    |||||||||||||| ||||||||| |  || ||| | |||| ||||||| |||||||||||| ||||||||    
T  26316866 atgttcaatgttttttttgcttccactattaatttaaaattattgaacatgttttatgaaatatgttttta 26316796  T

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Target: scaffold0236 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 5619 - 5711
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| | || |||| ||||||||||||||    
T  5619 catgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttat-atcaagagctaaatttccaaca 5711  T

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Target: scaffold0363 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 694 - 604
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaacac 117  Q
    |||||||||||||||||||||||||||  ||||||||||   ||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  694 catgttcaatgttttgtttgcttccgctattgattcata---gttaaacatgttttatgaaatctgttttt-attaagacctaaatttccaacac 604  T

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Target: scaffold0012 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 172961 - 172873
Alignment:
Q  27 ttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||| |||||| | |||||||||||||||| |||||    
T  172961 ttcaatgttttgtttgcttccgctattgattcataattgtagaacatgttttatgaaacctgtttat-attaagacctaaattttcaaca 172873  T

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Target: scaffold0208 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 6607 - 6699
Alignment:
Q  23 catgttcaatgttttgtttgcttccgcctttgattcat-aattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||| | |||||||||| ||||| | ||||||| ||||||||||||||    
T  6607 catgttcaatgttttgtttgcttccgctattgattcataaattgttgaacatggtttatgaaat-tgtttat-attaagagctaaatttccaaca 6699  T

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Target: scaffold0208; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 12481 - 12572
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcat-aattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||||| |||||||||||  ||||||||| |||||||||| | | |||||||||| ||||| | ||||||| ||||||||||||||    
T  12481 atgttcaatgttttatttgcttccgctattgattcataaattgttgaatatggtttatgaaat-tgtttat-attaagagctaaatttccaaca 12572  T

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Target: scaffold1114 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 1198 - 1261
Alignment:
Q  52 ttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttccaaca 116  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||| || |||||||||||    
T  1198 ttgattcataatggttgaacatgttttatgaaatctgttttt-attaagatctgaatttccaaca 1261  T

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Target: scaffold0085 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 38513 - 38600
Alignment:
Q  24 atgttcaatgttttgtttgcttccgcctttgattcataattgttgaacacgttttatgaaatctgtttttaattaagacctaaatttcc 112  Q
    |||||||||||||||||||||||| |  ||||||  ||||  ||||||| || |||||||||||| ||||| ||||  |||||||||||    
T  38513 atgttcaatgttttgtttgcttccactgttgatttctaatgattgaacatgtcttatgaaatctggttttatttaa-tcctaaatttcc 38600  T

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