View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15232_high_1 (Length: 611)

Name: NF15232_high_1
Description: NF15232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15232_high_1
NF15232_high_1
[»] chr6 (59 HSPs)
chr6 (52-555)||(2286769-2287289)
chr6 (221-557)||(19471335-19471669)
chr6 (221-557)||(25396895-25397228)
chr6 (72-199)||(1650518-1650645)
chr6 (72-199)||(14626543-14626670)
chr6 (196-286)||(10986448-10986538)
chr6 (196-290)||(25598339-25598433)
chr6 (196-286)||(4477555-4477645)
chr6 (196-286)||(23838896-23838986)
chr6 (440-560)||(24512841-24512959)
chr6 (454-555)||(25598596-25598697)
chr6 (526-596)||(1639979-1640049)
chr6 (221-298)||(9187217-9187294)
chr6 (530-594)||(16132388-16132452)
chr6 (526-579)||(1254852-1254905)
chr6 (221-298)||(24513100-24513177)
chr6 (537-594)||(31021685-31021741)
chr6 (491-594)||(19443000-19443104)
chr6 (526-571)||(1588763-1588808)
chr6 (537-594)||(13765378-13765434)
chr6 (537-594)||(23225822-23225878)
chr6 (527-583)||(1589755-1589811)
chr6 (526-575)||(34296175-34296224)
chr6 (539-579)||(9621528-9621568)
chr6 (196-232)||(14626496-14626532)
chr6 (222-306)||(31252146-31252230)
chr6 (501-559)||(34639985-34640043)
chr6 (501-559)||(34646659-34646717)
chr6 (508-558)||(15816660-15816712)
chr6 (542-579)||(16884590-16884627)
chr6 (537-594)||(21119769-21119826)
chr6 (501-558)||(29614146-29614203)
chr6 (196-232)||(1658125-1658161)
chr6 (501-557)||(4477856-4477912)
chr6 (501-557)||(23839197-23839253)
chr6 (546-594)||(23956903-23956950)
chr6 (539-579)||(25739355-25739395)
chr6 (503-559)||(31252423-31252479)
chr6 (196-232)||(35009818-35009854)
chr6 (201-232)||(1650471-1650502)
chr6 (124-199)||(31628057-31628131)
chr6 (527-585)||(9184970-9185028)
chr6 (240-302)||(11288922-11288984)
chr6 (505-559)||(15458492-15458546)
chr6 (505-559)||(15465087-15465141)
chr6 (501-558)||(930095-930152)
chr6 (501-558)||(18800436-18800493)
chr6 (500-557)||(25348485-25348542)
chr6 (530-593)||(5109678-5109742)
chr6 (505-557)||(9187498-9187550)
chr6 (506-558)||(12168366-12168418)
chr6 (196-232)||(14152153-14152189)
chr6 (506-558)||(19287275-19287327)
chr6 (506-558)||(19785869-19785921)
chr6 (506-558)||(19878459-19878511)
chr6 (530-590)||(23620194-23620253)
chr6 (527-559)||(28288508-28288540)
chr6 (124-192)||(33324465-33324532)
chr6 (124-192)||(35136419-35136486)
[»] chr3 (53 HSPs)
chr3 (72-555)||(16800584-16801081)
chr3 (72-199)||(15614545-15614672)
chr3 (196-300)||(20248034-20248139)
chr3 (196-300)||(38311053-38311158)
chr3 (196-288)||(14763024-14763116)
chr3 (196-286)||(9534026-9534116)
chr3 (196-286)||(23370773-23370863)
chr3 (196-298)||(51301291-51301392)
chr3 (72-165)||(15575526-15575619)
chr3 (508-579)||(2247628-2247701)
chr3 (530-594)||(52212396-52212459)
chr3 (220-291)||(13302502-13302573)
chr3 (220-291)||(13324050-13324121)
chr3 (537-594)||(42559-42615)
chr3 (526-579)||(13837159-13837212)
chr3 (537-594)||(16324505-16324561)
chr3 (221-298)||(17240768-17240845)
chr3 (530-594)||(23392782-23392847)
chr3 (526-579)||(51602503-51602556)
chr3 (526-577)||(11913816-11913867)
chr3 (220-291)||(13313158-13313229)
chr3 (527-594)||(55291567-55291634)
chr3 (221-298)||(18928965-18929042)
chr3 (492-594)||(178444-178548)
chr3 (478-557)||(17240513-17240591)
chr3 (532-579)||(17513854-17513901)
chr3 (537-579)||(13437270-13437312)
chr3 (537-594)||(10551354-10551411)
chr3 (529-582)||(11325023-11325076)
chr3 (526-579)||(30123352-30123405)
chr3 (530-594)||(13025534-13025598)
chr3 (527-576)||(15239079-15239128)
chr3 (537-594)||(17547435-17547492)
chr3 (500-557)||(18929243-18929300)
chr3 (501-557)||(9534326-9534382)
chr3 (530-594)||(13029126-13029190)
chr3 (539-579)||(16828259-16828299)
chr3 (201-232)||(15614688-15614719)
chr3 (221-291)||(16801728-16801799)
chr3 (501-555)||(20247791-20247845)
chr3 (501-559)||(23370504-23370562)
chr3 (501-555)||(24192955-24193009)
chr3 (501-558)||(16801467-16801523)
chr3 (116-149)||(22144722-22144755)
chr3 (506-559)||(24933827-24933880)
chr3 (501-557)||(14762758-14762814)
chr3 (530-594)||(30205576-30205639)
chr3 (506-558)||(41455097-41455149)
chr3 (196-232)||(47984499-47984535)
chr3 (196-232)||(47993786-47993822)
chr3 (196-232)||(48003073-48003109)
chr3 (196-232)||(48012359-48012395)
chr3 (124-192)||(55441257-55441324)
[»] scaffold0124 (4 HSPs)
scaffold0124 (196-597)||(35399-35800)
scaffold0124 (224-306)||(34525-34607)
scaffold0124 (456-557)||(34276-34377)
scaffold0124 (116-194)||(35816-35894)
[»] chr4 (46 HSPs)
chr4 (204-597)||(14911784-14912177)
chr4 (221-557)||(8834617-8834951)
chr4 (221-557)||(15307842-15308176)
chr4 (221-557)||(15244937-15245271)
chr4 (223-557)||(13888366-13888697)
chr4 (196-557)||(18213463-18213823)
chr4 (456-561)||(15408093-15408198)
chr4 (508-594)||(14035744-14035831)
chr4 (527-594)||(16370686-16370753)
chr4 (526-594)||(21188927-21188994)
chr4 (221-336)||(14486382-14486496)
chr4 (527-594)||(15415844-15415911)
chr4 (537-594)||(15712659-15712715)
chr4 (526-594)||(18230760-18230829)
chr4 (537-594)||(28386275-28386331)
chr4 (223-336)||(13887509-13887621)
chr4 (221-306)||(15407860-15407945)
chr4 (508-596)||(14049605-14049696)
chr4 (491-594)||(15991248-15991353)
chr4 (530-594)||(20898714-20898778)
chr4 (526-582)||(56114737-56114793)
chr4 (530-579)||(15447354-15447403)
chr4 (543-594)||(12729809-12729860)
chr4 (526-592)||(16277246-16277312)
chr4 (221-300)||(11847828-11847909)
chr4 (529-582)||(33661568-33661621)
chr4 (530-594)||(13878804-13878867)
chr4 (530-594)||(13882409-13882472)
chr4 (530-594)||(15076384-15076448)
chr4 (539-579)||(15239794-15239834)
chr4 (222-306)||(27905988-27906072)
chr4 (508-596)||(30147942-30148033)
chr4 (116-194)||(14911682-14911760)
chr4 (526-588)||(4171907-4171969)
chr4 (526-588)||(31116226-31116288)
chr4 (530-576)||(32490766-32490812)
chr4 (501-558)||(11848112-11848169)
chr4 (512-558)||(15747556-15747604)
chr4 (530-594)||(9333501-9333564)
chr4 (530-594)||(9387284-9387347)
chr4 (503-555)||(14486661-14486713)
chr4 (530-582)||(15069784-15069836)
chr4 (512-557)||(17143243-17143290)
chr4 (123-191)||(23270343-23270411)
chr4 (526-581)||(38979930-38979986)
chr4 (123-199)||(40885960-40886035)
[»] scaffold0012 (1 HSPs)
scaffold0012 (72-582)||(222180-222707)
[»] chr7 (58 HSPs)
chr7 (221-557)||(46625682-46626017)
chr7 (196-559)||(14566899-14567260)
chr7 (196-558)||(148315-148675)
chr7 (72-199)||(16479376-16479503)
chr7 (196-300)||(15167872-15167977)
chr7 (196-300)||(18873057-18873162)
chr7 (196-300)||(10896044-10896149)
chr7 (196-286)||(14422682-14422772)
chr7 (196-286)||(16009275-16009365)
chr7 (220-325)||(13664652-13664757)
chr7 (221-325)||(13679216-13679320)
chr7 (456-560)||(21230957-21231060)
chr7 (527-594)||(7530152-7530219)
chr7 (530-594)||(48744553-48744617)
chr7 (526-594)||(13256712-13256781)
chr7 (529-594)||(16574266-16574330)
chr7 (529-594)||(16591332-16591396)
chr7 (481-557)||(11382871-11382947)
chr7 (530-594)||(13898495-13898559)
chr7 (526-594)||(15214573-15214641)
chr7 (539-594)||(41285064-41285118)
chr7 (491-594)||(23556330-23556433)
chr7 (491-594)||(23557519-23557622)
chr7 (526-571)||(15727353-15727398)
chr7 (530-594)||(8249213-8249277)
chr7 (481-557)||(11389348-11389424)
chr7 (527-583)||(15726350-15726406)
chr7 (481-560)||(20311049-20311128)
chr7 (526-593)||(42042186-42042252)
chr7 (536-578)||(16250201-16250243)
chr7 (229-298)||(16677024-16677093)
chr7 (229-298)||(17651260-17651329)
chr7 (221-298)||(21231216-21231293)
chr7 (222-306)||(14230504-14230588)
chr7 (527-594)||(39994818-39994886)
chr7 (116-199)||(47481456-47481539)
chr7 (537-592)||(14188260-14188314)
chr7 (537-592)||(14190858-14190912)
chr7 (532-579)||(29005095-29005142)
chr7 (508-559)||(37726839-37726892)
chr7 (527-576)||(12207673-12207722)
chr7 (501-558)||(14422983-14423040)
chr7 (508-558)||(34958562-34958614)
chr7 (493-558)||(831633-831699)
chr7 (493-558)||(1196813-1196879)
chr7 (501-557)||(16009575-16009631)
chr7 (537-596)||(16107819-16107879)
chr7 (529-576)||(12201068-12201115)
chr7 (116-199)||(13320770-13320852)
chr7 (505-559)||(31155396-31155450)
chr7 (500-557)||(13679491-13679548)
chr7 (536-588)||(8777243-8777295)
chr7 (506-558)||(12590643-12590695)
chr7 (506-558)||(13007435-13007487)
chr7 (539-579)||(13893480-13893520)
chr7 (503-559)||(14319628-14319684)
chr7 (222-306)||(14319878-14319962)
chr7 (501-557)||(15168174-15168230)
[»] chr2 (35 HSPs)
chr2 (221-557)||(24661298-24661632)
chr2 (196-558)||(6260171-6260533)
chr2 (196-557)||(9242657-9243016)
chr2 (196-286)||(19661720-19661810)
chr2 (196-286)||(6483416-6483506)
chr2 (196-286)||(6486883-6486973)
chr2 (120-199)||(7508270-7508349)
chr2 (526-594)||(10039024-10039092)
chr2 (221-308)||(23063407-23063494)
chr2 (527-594)||(24161299-24161366)
chr2 (530-596)||(24272995-24273061)
chr2 (530-594)||(21245705-21245769)
chr2 (528-579)||(23375940-23375991)
chr2 (539-594)||(37380539-37380593)
chr2 (508-596)||(19802354-19802445)
chr2 (478-557)||(23265119-23265197)
chr2 (478-557)||(23280187-23280265)
chr2 (537-594)||(6477200-6477257)
chr2 (116-199)||(25265815-25265899)
chr2 (527-594)||(25652244-25652312)
chr2 (530-594)||(26904425-26904489)
chr2 (18-53)||(43093911-43093946)
chr2 (500-557)||(21908357-21908414)
chr2 (526-579)||(23086421-23086474)
chr2 (501-557)||(6483716-6483772)
chr2 (501-557)||(6487183-6487239)
chr2 (196-232)||(7508223-7508259)
chr2 (221-300)||(26583551-26583630)
chr2 (116-191)||(36982875-36982949)
chr2 (221-298)||(21908079-21908156)
chr2 (526-593)||(23338358-23338424)
chr2 (530-594)||(22110559-22110622)
chr2 (196-232)||(25265768-25265804)
chr2 (506-558)||(26583830-26583882)
chr2 (503-559)||(27207718-27207774)
[»] scaffold0138 (3 HSPs)
scaffold0138 (286-557)||(12082-12352)
scaffold0138 (221-283)||(1539-1601)
scaffold0138 (127-192)||(22824-22888)
[»] chr8 (53 HSPs)
chr8 (212-593)||(21931411-21931788)
chr8 (212-466)||(21840115-21840366)
chr8 (211-557)||(19750263-19750605)
chr8 (72-199)||(6774671-6774798)
chr8 (196-300)||(8727986-8728091)
chr8 (196-286)||(44477321-44477411)
chr8 (196-286)||(44492479-44492569)
chr8 (72-199)||(24548705-24548820)
chr8 (456-560)||(14056561-14056664)
chr8 (456-560)||(25111931-25112034)
chr8 (221-306)||(14056811-14056896)
chr8 (221-306)||(25111699-25111784)
chr8 (508-596)||(21860494-21860585)
chr8 (220-291)||(29643649-29643720)
chr8 (537-594)||(8413713-8413769)
chr8 (537-594)||(11775745-11775801)
chr8 (537-594)||(18023441-18023497)
chr8 (221-325)||(18613995-18614099)
chr8 (530-594)||(20387509-20387572)
chr8 (526-594)||(22433579-22433646)
chr8 (526-578)||(42559434-42559486)
chr8 (508-583)||(15635069-15635146)
chr8 (526-592)||(20494315-20494381)
chr8 (527-594)||(22617655-22617722)
chr8 (478-557)||(23482053-23482131)
chr8 (537-594)||(19882979-19883035)
chr8 (196-232)||(6774624-6774660)
chr8 (532-596)||(22815558-22815622)
chr8 (539-579)||(34951458-34951498)
chr8 (479-557)||(18614250-18614327)
chr8 (536-594)||(25657478-25657535)
chr8 (501-559)||(44477621-44477679)
chr8 (501-559)||(44492779-44492837)
chr8 (456-558)||(27940851-27940953)
chr8 (530-594)||(15003066-15003129)
chr8 (196-232)||(17345419-17345455)
chr8 (539-579)||(22005055-22005095)
chr8 (530-593)||(24980136-24980200)
chr8 (550-594)||(36601395-36601438)
chr8 (508-557)||(38184696-38184747)
chr8 (539-579)||(44522157-44522197)
chr8 (201-232)||(24548836-24548867)
chr8 (526-588)||(9404867-9404929)
chr8 (545-579)||(11250761-11250795)
chr8 (526-555)||(364884-364913)
chr8 (527-560)||(21325764-21325797)
chr8 (526-593)||(28854836-28854902)
chr8 (500-557)||(39364918-39364975)
chr8 (539-579)||(21330858-21330898)
chr8 (539-579)||(21966679-21966719)
chr8 (539-579)||(21979445-21979485)
chr8 (539-579)||(21999416-21999456)
chr8 (536-588)||(45134078-45134130)
[»] scaffold0004 (3 HSPs)
scaffold0004 (221-447)||(128766-128991)
scaffold0004 (478-557)||(116873-116951)
scaffold0004 (530-594)||(60448-60511)
[»] scaffold0031 (2 HSPs)
scaffold0031 (221-557)||(132501-132834)
scaffold0031 (212-557)||(121615-121958)
[»] scaffold0169 (1 HSPs)
scaffold0169 (212-581)||(6685-7055)
[»] scaffold0335 (2 HSPs)
scaffold0335 (212-593)||(2592-2969)
scaffold0335 (508-596)||(1791-1882)
[»] scaffold0600 (1 HSPs)
scaffold0600 (212-593)||(447-824)
[»] scaffold0232 (1 HSPs)
scaffold0232 (221-408)||(18578-18764)
[»] scaffold0037 (1 HSPs)
scaffold0037 (196-557)||(71343-71703)
[»] chr1 (29 HSPs)
chr1 (196-557)||(16372648-16373009)
chr1 (72-199)||(41393932-41394059)
chr1 (196-298)||(32651269-32651371)
chr1 (221-557)||(11157814-11158148)
chr1 (196-286)||(20437291-20437381)
chr1 (79-199)||(45051172-45051280)
chr1 (475-557)||(20805294-20805376)
chr1 (526-594)||(21180244-21180311)
chr1 (530-597)||(18271345-18271412)
chr1 (530-597)||(18275999-18276066)
chr1 (456-557)||(19663517-19663618)
chr1 (221-298)||(18712521-18712598)
chr1 (508-596)||(13227890-13227981)
chr1 (530-594)||(20902157-20902221)
chr1 (539-594)||(634968-635022)
chr1 (532-579)||(7791537-7791584)
chr1 (529-594)||(8686049-8686114)
chr1 (529-582)||(28203731-28203784)
chr1 (477-557)||(18712775-18712854)
chr1 (530-582)||(21660394-21660446)
chr1 (527-594)||(21526747-21526814)
chr1 (478-557)||(32651549-32651627)
chr1 (537-594)||(13527678-13527735)
chr1 (501-557)||(20437024-20437080)
chr1 (201-232)||(45051296-45051327)
chr1 (526-593)||(297383-297449)
chr1 (530-582)||(24476353-24476405)
chr1 (506-558)||(41112038-41112090)
chr1 (196-232)||(41394070-41394106)
[»] chr5 (36 HSPs)
chr5 (196-558)||(42961263-42961622)
chr5 (196-557)||(22337217-22337578)
chr5 (196-557)||(22340755-22341116)
chr5 (77-291)||(23111463-23111679)
chr5 (196-286)||(28370321-28370411)
chr5 (196-300)||(22750838-22750943)
chr5 (196-286)||(38144803-38144893)
chr5 (196-286)||(19512084-19512174)
chr5 (72-199)||(29190688-29190803)
chr5 (481-560)||(22438745-22438824)
chr5 (508-593)||(17813483-17813571)
chr5 (537-594)||(33472528-33472584)
chr5 (526-579)||(36461064-36461117)
chr5 (478-557)||(18407944-18408022)
chr5 (229-298)||(18408200-18408269)
chr5 (526-579)||(21980045-21980098)
chr5 (530-579)||(22356882-22356931)
chr5 (478-557)||(23111200-23111278)
chr5 (530-592)||(21663109-21663170)
chr5 (529-594)||(26707396-26707462)
chr5 (529-594)||(26977130-26977196)
chr5 (529-594)||(21553354-21553418)
chr5 (526-593)||(24276462-24276530)
chr5 (526-593)||(24385683-24385751)
chr5 (501-558)||(38144536-38144593)
chr5 (527-594)||(7786200-7786268)
chr5 (501-557)||(19512385-19512441)
chr5 (501-557)||(28370055-28370111)
chr5 (526-557)||(6766779-6766810)
chr5 (52-82)||(23111685-23111715)
chr5 (526-588)||(43122047-43122109)
chr5 (526-588)||(43125580-43125642)
chr5 (123-199)||(34939040-34939116)
chr5 (530-593)||(17021877-17021941)
chr5 (506-558)||(23528634-23528686)
chr5 (204-232)||(29190641-29190669)
[»] scaffold0019 (3 HSPs)
scaffold0019 (196-557)||(34135-34495)
scaffold0019 (456-560)||(135427-135531)
scaffold0019 (254-306)||(135227-135279)
[»] scaffold0053 (1 HSPs)
scaffold0053 (221-522)||(81246-81547)
[»] scaffold0094 (1 HSPs)
scaffold0094 (221-557)||(51968-52304)
[»] scaffold0337 (1 HSPs)
scaffold0337 (196-557)||(8770-9131)
[»] scaffold0096 (1 HSPs)
scaffold0096 (315-556)||(39508-39746)
[»] scaffold0215 (3 HSPs)
scaffold0215 (72-199)||(16660-16787)
scaffold0215 (196-232)||(16613-16649)
scaffold0215 (52-82)||(16788-16818)
[»] scaffold0075 (1 HSPs)
scaffold0075 (72-190)||(34834-34952)
[»] scaffold0028 (3 HSPs)
scaffold0028 (211-557)||(1780-2115)
scaffold0028 (255-557)||(69500-69801)
scaffold0028 (124-192)||(79311-79378)
[»] scaffold0127 (1 HSPs)
scaffold0127 (196-291)||(9937-10033)
[»] scaffold0026 (4 HSPs)
scaffold0026 (196-286)||(111384-111474)
scaffold0026 (221-300)||(12104-12184)
scaffold0026 (501-559)||(111684-111742)
scaffold0026 (501-558)||(11850-11907)
[»] scaffold0553 (2 HSPs)
scaffold0553 (196-286)||(10463-10553)
scaffold0553 (501-559)||(10194-10252)
[»] scaffold0544 (2 HSPs)
scaffold0544 (196-286)||(1793-1883)
scaffold0544 (501-559)||(1524-1582)
[»] scaffold0139 (2 HSPs)
scaffold0139 (454-557)||(14997-15099)
scaffold0139 (221-325)||(15227-15331)
[»] scaffold0107 (1 HSPs)
scaffold0107 (456-560)||(40529-40633)
[»] scaffold0317 (2 HSPs)
scaffold0317 (221-325)||(1109-1213)
scaffold0317 (500-557)||(1384-1441)
[»] scaffold0162 (2 HSPs)
scaffold0162 (76-199)||(8602-8728)
scaffold0162 (196-232)||(8555-8591)
[»] scaffold0461 (2 HSPs)
scaffold0461 (221-298)||(264-341)
scaffold0461 (478-557)||(8-86)
[»] scaffold0195 (2 HSPs)
scaffold0195 (77-191)||(18918-19035)
scaffold0195 (77-191)||(21002-21119)
[»] scaffold0020 (2 HSPs)
scaffold0020 (221-296)||(102186-102261)
scaffold0020 (478-557)||(101928-102006)
[»] scaffold0815 (1 HSPs)
scaffold0815 (480-557)||(1428-1504)
[»] scaffold0235 (3 HSPs)
scaffold0235 (221-298)||(22849-22926)
scaffold0235 (456-556)||(22594-22693)
scaffold0235 (221-291)||(15198-15268)
[»] scaffold0222 (2 HSPs)
scaffold0222 (221-298)||(16542-16619)
scaffold0222 (478-557)||(16797-16875)
[»] scaffold1276 (1 HSPs)
scaffold1276 (526-594)||(1159-1226)
[»] scaffold0635 (1 HSPs)
scaffold0635 (526-594)||(7978-8046)
[»] scaffold0607 (1 HSPs)
scaffold0607 (508-596)||(3793-3884)
[»] scaffold0388 (2 HSPs)
scaffold0388 (526-596)||(14946-15015)
scaffold0388 (530-596)||(15067-15132)
[»] scaffold0034 (2 HSPs)
scaffold0034 (529-594)||(33893-33958)
scaffold0034 (222-306)||(73007-73091)
[»] scaffold0001 (2 HSPs)
scaffold0001 (537-594)||(176824-176880)
scaffold0001 (539-579)||(152089-152129)
[»] scaffold0064 (1 HSPs)
scaffold0064 (508-596)||(68988-69079)
[»] scaffold0016 (2 HSPs)
scaffold0016 (527-594)||(182010-182078)
scaffold0016 (539-579)||(172087-172127)
[»] scaffold0599 (1 HSPs)
scaffold0599 (526-577)||(1092-1143)
[»] scaffold0481 (1 HSPs)
scaffold0481 (527-597)||(634-705)
[»] scaffold0483 (1 HSPs)
scaffold0483 (220-305)||(11258-11343)
[»] scaffold0008 (1 HSPs)
scaffold0008 (508-593)||(11372-11460)
[»] scaffold0634 (1 HSPs)
scaffold0634 (221-300)||(3384-3464)
[»] scaffold0447 (2 HSPs)
scaffold0447 (530-594)||(7873-7937)
scaffold0447 (530-594)||(12487-12551)
[»] scaffold0383 (1 HSPs)
scaffold0383 (530-594)||(10482-10546)
[»] scaffold0334 (1 HSPs)
scaffold0334 (528-592)||(2140-2203)
[»] scaffold0310 (1 HSPs)
scaffold0310 (484-560)||(17625-17701)
[»] scaffold0117 (2 HSPs)
scaffold0117 (508-596)||(21848-21939)
scaffold0117 (526-596)||(34521-34592)
[»] scaffold0672 (1 HSPs)
scaffold0672 (530-596)||(7430-7497)
[»] scaffold0154 (2 HSPs)
scaffold0154 (221-300)||(30577-30656)
scaffold0154 (501-558)||(30856-30913)
[»] scaffold0146 (1 HSPs)
scaffold0146 (478-557)||(13609-13687)
[»] scaffold0125 (2 HSPs)
scaffold0125 (116-194)||(35265-35343)
scaffold0125 (196-232)||(35359-35395)
[»] scaffold0090 (3 HSPs)
scaffold0090 (527-594)||(31411-31478)
scaffold0090 (501-558)||(18168-18225)
scaffold0090 (221-288)||(17890-17958)
[»] scaffold0071 (1 HSPs)
scaffold0071 (491-567)||(51985-52062)
[»] scaffold0962 (1 HSPs)
scaffold0962 (530-592)||(582-643)
[»] scaffold0413 (1 HSPs)
scaffold0413 (508-567)||(11659-11720)
[»] scaffold0181 (1 HSPs)
scaffold0181 (530-592)||(25487-25548)
[»] scaffold0132 (2 HSPs)
scaffold0132 (540-594)||(3641-3694)
scaffold0132 (540-592)||(11603-11654)
[»] scaffold0025 (2 HSPs)
scaffold0025 (221-286)||(14664-14730)
scaffold0025 (501-555)||(14398-14452)
[»] scaffold0696 (1 HSPs)
scaffold0696 (529-594)||(3354-3419)
[»] scaffold0029 (2 HSPs)
scaffold0029 (236-300)||(111638-111703)
scaffold0029 (505-558)||(111885-111938)
[»] scaffold0042 (2 HSPs)
scaffold0042 (530-594)||(52228-52292)
scaffold0042 (508-596)||(67704-67790)
[»] scaffold0080 (2 HSPs)
scaffold0080 (532-579)||(30007-30054)
scaffold0080 (532-579)||(35472-35519)
[»] scaffold0298 (1 HSPs)
scaffold0298 (508-582)||(602-678)
[»] scaffold0924 (1 HSPs)
scaffold0924 (501-558)||(750-807)
[»] scaffold0453 (1 HSPs)
scaffold0453 (245-306)||(10798-10859)
[»] scaffold0247 (2 HSPs)
scaffold0247 (501-558)||(11340-11397)
scaffold0247 (221-300)||(11065-11144)
[»] scaffold0175 (1 HSPs)
scaffold0175 (530-579)||(18873-18922)
[»] scaffold1555 (1 HSPs)
scaffold1555 (550-594)||(208-251)
[»] scaffold0609 (1 HSPs)
scaffold0609 (503-559)||(5856-5912)
[»] scaffold0500 (1 HSPs)
scaffold0500 (530-594)||(10675-10738)
[»] scaffold0480 (1 HSPs)
scaffold0480 (527-583)||(1490-1545)
[»] scaffold0457 (1 HSPs)
scaffold0457 (539-579)||(10876-10916)
[»] scaffold0338 (1 HSPs)
scaffold0338 (508-557)||(2845-2896)
[»] scaffold0327 (1 HSPs)
scaffold0327 (124-192)||(5729-5796)
[»] scaffold0301 (2 HSPs)
scaffold0301 (539-579)||(11300-11340)
scaffold0301 (539-579)||(15700-15740)
[»] scaffold0058 (1 HSPs)
scaffold0058 (124-192)||(70714-70781)
[»] scaffold0023 (1 HSPs)
scaffold0023 (526-558)||(106021-106053)
[»] scaffold0014 (1 HSPs)
scaffold0014 (527-582)||(189750-189805)
[»] scaffold0970 (1 HSPs)
scaffold0970 (52-98)||(2193-2239)
[»] scaffold0371 (1 HSPs)
scaffold0371 (526-560)||(8544-8578)
[»] scaffold0249 (1 HSPs)
scaffold0249 (505-559)||(13893-13947)
[»] scaffold0141 (1 HSPs)
scaffold0141 (526-588)||(34031-34093)
[»] scaffold0098 (2 HSPs)
scaffold0098 (545-579)||(25185-25219)
scaffold0098 (545-579)||(36055-36089)
[»] scaffold0049 (1 HSPs)
scaffold0049 (526-588)||(80719-80781)
[»] scaffold0485 (1 HSPs)
scaffold0485 (527-560)||(3768-3801)
[»] scaffold0456 (2 HSPs)
scaffold0456 (501-558)||(930-987)
scaffold0456 (501-558)||(8075-8132)
[»] scaffold0720 (1 HSPs)
scaffold0720 (503-559)||(3401-3457)
[»] scaffold0601 (1 HSPs)
scaffold0601 (196-236)||(1233-1273)
[»] scaffold0180 (1 HSPs)
scaffold0180 (508-557)||(11630-11681)
[»] scaffold0015 (1 HSPs)
scaffold0015 (539-579)||(209894-209934)
[»] scaffold0011 (1 HSPs)
scaffold0011 (527-579)||(20779-20831)


Alignment Details
Target: chr6 (Bit Score: 419; Significance: 0; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 52 - 555
Target Start/End: Complemental strand, 2287289 - 2286769
Alignment:
Q  52 tactgtgactgcacgcttaccagctcgctta-agcg--tgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattc 148  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2287289 tactgtgactgcacgcttaccagctcgcttacagcgcatgcattcatcagacagcaactagcgtcgcttgcagcgtcgcttaagcgaccattcaaaattc 2287190  T
Q  149 tggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat--------------gcccaaacatgtttccaaagaatgtttataggttc 234  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||              |||||||||||||||||||||||||||||||||||    
T  2287189 tgcagaacaaaagttacggttttcacccatttttcacccaaaactcccaattttgatctccaaatgcccaaacatgtttccaaagaatgtttataggttc 2287090  T
Q  235 aatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctcaaattctctccaac 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  2287089 aatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagctcattccaacaatcttgcataatctctcaaattctctctaac 2286990  T
Q  335 aactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttt 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  2286989 aactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaatgatctaaacatgattctaagcataattaacatgtctcctacacttt 2286890  T
Q  435 tcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattga 534  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2286889 tcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattga 2286790  T
Q  535 gagttagtctcacccttacct 555  Q
    |||||||||||||||||||||    
T  2286789 gagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 221 - 557
Target Start/End: Complemental strand, 19471669 - 19471335
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| || |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19471669 atgtttacagattcaatatacaactaggcatctataggaacataaaacatacatcaacaacaacaattcagctcattccaacaatcttgcataatctctc 19471570  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  19471569 aaattctctccaacaa-tcccaacctttcccaattctgattacagcaatgttacagaatcctaaaaacgatctgaacatgattctaagcataattaacat 19471471  T
Q  421 gtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatat 520  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  19471470 gtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcttatttcaagaac-attcatgttaaatcaatttccagaaattatat 19471372  T
Q  521 attacaatcattgagagttagtctcacccttacctta 557  Q
    ||||  ||||| ||||| ||| |||||||||||||||    
T  19471371 attatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 25396895 - 25397228
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||| | ||||||    
T  25396895 atgtttacaggttcagtacacaactaggcatctaaaggaacataaaacaggcatcaacaacaacaattcagctcattctaacaatgttgcaaattctctc 25396994  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||  |||||| ||||||| |||||||| |||||||||||||||||| |    
T  25396995 aaattctctccaacaa-tcccaatctttcccaattatgattacaacaatgttacagaatcctaaaaacgacctgaacattattctaagcataattaactt 25397093  T
Q  421 gtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatat 520  Q
    |||||||| |||||||   |||||||||||| ||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  25397094 gtctcctacacttttcctttcaaaatcagtaatagaaccctaatt-cacaattcctatctcaagaacaatt-atgttaaatcaattttcagaaattatat 25397191  T
Q  521 attacaatcattgagagttagtctcacccttacctta 557  Q
    ||||  ||||| ||||||||| |||||||||||||||    
T  25397192 attatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 1650645 - 1650518
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| | |||    
T  1650645 cagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagcgtcgcttaagcgaccattcaaaattatgcagaacaaaagttacgggttt 1650546  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  1650545 cacccatttttcacccaaaactcccaat 1650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 14626670 - 14626543
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| | |||||||||||| | |||    
T  14626670 cagcacgcttaaacgtgcattcatcagacagcaactagcgtcgcttgcatcgtcgcttaagcgaccatgcaaaattctgcataacaaaagttacgggttt 14626571  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    || |||||||||||||||||||| ||||    
T  14626570 caaccatttttcacccaaaactcccaat 14626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 10986538 - 10986448
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10986538 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaagaacaacaa 10986448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 25598339 - 25598433
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattca 290  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  25598339 caatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagacatctaaataaacataaaacatgcatcaacaacaacaattca 25598433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 4477555 - 4477645
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  4477555 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattagacatctaaaggaacataaaacacgcatcaacaacaacaa 4477645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 23838896 - 23838986
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  23838896 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggtatctaaaggaacataaaacatgcatcaacgacaacaa 23838986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 440 - 560
Target Start/End: Complemental strand, 24512959 - 24512841
Alignment:
Q  440 tcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagtt 539  Q
    ||||||||||||| ||||||||||||||| ||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |    
T  24512959 tcaaaatcagtat-agaaccctaattccc-aatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagat 24512862  T
Q  540 agtctcacccttaccttagat 560  Q
    ||||||||||| |||||||||    
T  24512861 agtctcaccctcaccttagat 24512841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 454 - 555
Target Start/End: Original strand, 25598596 - 25598697
Alignment:
Q  454 agaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcaccctta 552  Q
    ||||||||||||||| |||  |||||| ||||||||| |||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||    
T  25598596 agaaccctaattccc-aatctctattttcaagaacaactcatgttaaatcaattttcagaaaatatatattatgatcattgagagttagtctcaccctta 25598694  T
Q  553 cct 555  Q
    |||    
T  25598695 cct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 526 - 596
Target Start/End: Original strand, 1639979 - 1640049
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 596  Q
    |||||||||||||||| |||||||||||||||||||||||||  || |||||| |||||||||||||||||    
T  1639979 aatcattgagagttagcctcacccttaccttagatcgatgaatcaaactctaccaaaatctgattctcctc 1640049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 9187217 - 9187294
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||||| ||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  9187217 atgtttacaggttctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattc 9187294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 16132452 - 16132388
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  16132452 attgagagttagcctcacccttaccttaaattgatgaacaaagctctacaaaaatcagattctcc 16132388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 1254852 - 1254905
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1254852 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctaca 1254905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 24513177 - 24513100
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| ||||||| || |||| ||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  24513177 atgtttacaggttcattacacaactagacatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattc 24513100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 31021741 - 31021685
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  31021741 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 31021685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 19443104 - 19443000
Alignment:
Q  491 tcatgttaaatcaattttcagaagttatatat--tacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||||||||||| ||||| ||| |||   || ||| ||||| |||||||||||||||||||||  || |||||| ||||||||||||||||| ||    
T  19443104 tcatgttaaatcaattt-cagaatttacatacactataattattgaaagttagtctcacccttaccttgaattgatgaaaaaagctctacaaaaatcaga 19443006  T
Q  589 ttctcc 594  Q
    ||||||    
T  19443005 ttctcc 19443000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 571
Target Start/End: Original strand, 1588763 - 1588808
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaa 571  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  1588763 aatcattgagagttagtctcacccttaccttagattgatgaacaaa 1588808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 13765378 - 13765434
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  13765378 gttagtctcactcttaccttagatcgatgaacaaagctctac-ataatctgattctcc 13765434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 23225878 - 23225822
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  23225878 gttagtctcacccttaccttagatcgatgaacaaaactctac-agaatctgattctcc 23225822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 583
Target Start/End: Complemental strand, 1589811 - 1589755
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 583  Q
    ||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||    
T  1589811 atcattgagagttagcctcacccttaccttagattgaagaacaaaactctacaaaaa 1589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 34296224 - 34296175
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctc 575  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  34296224 aatcattgagagttaacctcacccttaccttagattgatgaacaaagctc 34296175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 9621568 - 9621528
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  9621568 tagtctcacccttaccttagattgatgaacaaagctctaca 9621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 14626532 - 14626496
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  14626532 caatgcccaaacatgtttccaaagaatgtttataggt 14626496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 31252146 - 31252230
Alignment:
Q  222 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||||| |||||| ||| |||| ||| |||| |||||||||  |||||||||| ||||||| |||||||  ||||||||||||||    
T  31252146 tgtttacaggttctatacacaactagtcatcgaaaggaacacgaaacatgcattaacaacatcaattcaactcattccaacaatc 31252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 559
Target Start/End: Complemental strand, 34640043 - 34639985
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  34640043 tcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttaga 34639985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 559
Target Start/End: Complemental strand, 34646717 - 34646659
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  34646717 tcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttaga 34646659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 558
Target Start/End: Complemental strand, 15816712 - 15816660
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  15816712 tcagaagttatataatcgaaaatcattgagagttagtctcacccttaccttag 15816660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 579
Target Start/End: Complemental strand, 16884627 - 16884590
Alignment:
Q  542 tctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  16884627 tctcacccttaccttagattgatgaacaaagctctaca 16884590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 21119826 - 21119769
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||||||  |||||||    
T  21119826 gttagtctcacccttaccttgaattgatgaacaaagctttacaaaaatcaaattctcc 21119769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 29614203 - 29614146
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  29614203 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 1658161 - 1658125
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1658161 caatgcccaaacatgtttccaaagattgtttataggt 1658125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 4477856 - 4477912
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  4477856 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 23839197 - 23839253
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  23839197 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 594
Target Start/End: Original strand, 23956903 - 23956950
Alignment:
Q  546 acccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||    
T  23956903 acccctaccttagatcgatgaacaaagctctac-agaatctgattctcc 23956950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 25739355 - 25739395
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  25739355 tagtcccacccttaccttagattgatgaacaaagctctaca 25739395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 31252423 - 31252479
Alignment:
Q  503 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||| |||||||||| ||||||| | || || ||||||||||||||||||    
T  31252423 aattttcagaaattatatattataatcattaaaagataatctcacccttaccttaga 31252479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 35009854 - 35009818
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35009854 caatgcccaaacatgtttccaaagattgtttataggt 35009818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 1650502 - 1650471
Alignment:
Q  201 cccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||||||||||    
T  1650502 cccaaacatgtttccaaagaatgtttataggt 1650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 31628057 - 31628131
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||| || |||| |||| ||| ||||| | || ||||| ||||||||||||||||| ||||    
T  31628057 tcgcttaagcgaccattcataaatctgcagaa-aaatgttacgggttccacccctttttcacccaaaactcccaat 31628131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 585
Target Start/End: Complemental strand, 9185028 - 9184970
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatc 585  Q
    ||||||||||| ||||||||||||||||||   | |||||||||| |||| ||||||||    
T  9185028 atcattgagagatagtctcacccttaccttgatttgatgaacaaaactctccaaaaatc 9184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 11288984 - 11288922
Alignment:
Q  240 acaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaac 302  Q
    |||| |||||||| |||||||||||| | |||||| ||||||| |||||||  ||||||||||    
T  11288984 acaactaggcatcaaaaggaacataacatatgcattaacaacatcaattcaactcattccaac 11288922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 559
Target Start/End: Original strand, 15458492 - 15458546
Alignment:
Q  505 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 15458546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 559
Target Start/End: Original strand, 15465087 - 15465141
Alignment:
Q  505 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 15465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 930152 - 930095
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||||||||  |||| ||||  || |||||||| ||||||||||||||||||||    
T  930152 tcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 18800436 - 18800493
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||| ||||    
T  18800436 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 25348485 - 25348542
Alignment:
Q  500 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||| || |||| ||  || |||||||| |||||||||||||||||||    
T  25348485 atcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 593
Target Start/End: Complemental strand, 5109742 - 5109678
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 593  Q
    |||||||||||| ||||||||||||||  || || ||||||| ||||||| |||||||| |||||    
T  5109742 attgagagttagcctcacccttaccttgaattgaagaacaaaactctacagaaaatctggttctc 5109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  505 ttttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 14152153 - 14152189
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||||| |||||||||||||||||| |||||||||||    
T  14152153 caatgctcaaacatgtttccaaagattgtttataggt 14152189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 590
Target Start/End: Complemental strand, 23620253 - 23620194
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgatt 590  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||    
T  23620253 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagatt 23620194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 527 - 559
Target Start/End: Complemental strand, 28288540 - 28288508
Alignment:
Q  527 atcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||| |||||||||||||||||||||    
T  28288540 atcattgagagatagtctcacccttaccttaga 28288508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 33324465 - 33324532
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    |||||||||||| |||||| ||||||| |||| ||| ||||| | |||||||| |||||||||| ||||    
T  33324465 tcgcttaagcgatcattcataattctgcagaa-aaatgttacgggtttcacccctttttcaccccaaac 33324532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 35136486 - 35136419
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    ||||||||||||||||||| ||||||  |||| ||| ||||| | |||||||  |||||||||||||||    
T  35136486 tcgcttaagcgaccattcataattctacagaa-aaatgttacgggtttcacctctttttcacccaaaac 35136419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 411; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 72 - 555
Target Start/End: Original strand, 16800584 - 16801081
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  16800584 cagcacgcttaagcgtgcagtcatcagacaggaactagcgtcgcttgcagcgtcgcttaagcgaccattcaaaattctgcagaacaaaagttacggtttt 16800683  T
Q  172 cacccatttttcacccaaaactcacaat--------------gcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaag 257  Q
    ||||||||||||||||||||||| ||||              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16800684 cacccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccgaagaatgtttataggttcaatatacaattaggcatctaaag 16800783  T
Q  258 gaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattct 357  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16800784 gaacataaaacatgcatcaacaacaacaattcagctcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattct 16800883  T
Q  358 gattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatcagtattagaa 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16800884 gattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaa 16800983  T
Q  458 ccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16800984 ccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 15614545 - 15614672
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  15614545 cagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcagaacaaaagttacaggttt 15614644  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  15614645 cacccatttttcacccaaaactcccaat 15614672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 196 - 300
Target Start/End: Complemental strand, 20248139 - 20248034
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  20248139 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 20248040  T
Q  295 attcca 300  Q
    ||||||    
T  20248039 attcca 20248034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 196 - 300
Target Start/End: Complemental strand, 38311158 - 38311053
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  38311158 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 38311059  T
Q  295 attcca 300  Q
    ||||||    
T  38311058 attcca 38311053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 14763116 - 14763024
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt 288  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763116 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt 14763024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 9534026 - 9534116
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9534026 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 9534116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 23370863 - 23370773
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  23370863 caatgcccaaacatgtttccaaagattgtttataggttcattatacaataagacatctaaaggaacataaaacacgcatcaacaacaacaa 23370773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 51301291 - 51301392
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    |||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||    
T  51301291 caatgcccaa-catgtttccaaagattgtttataggttcattatgcaattaggcatctaaataaacataaaacatgcatcaacaacaacaattcagatca 51301389  T
Q  296 ttc 298  Q
    |||    
T  51301390 ttc 51301392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 15575526 - 15575619
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttac 165  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||    
T  15575526 cagcacgcttaagcgtgcattcatcagacatcaactagcgtcgcttgcagcatcgcttaagtgaccattcaaaattctgcagaacaaaagttac 15575619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 508 - 579
Target Start/End: Complemental strand, 2247701 - 2247628
Alignment:
Q  508 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2247701 tcagaagttatataatttataattattgagagttagtctcacccttaccttagattgatgaacaaagctctaca 2247628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 52212459 - 52212396
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  52212459 attgagagttagcctcacccttaccttagattgatgaacaaagctctac-aaaatctgattctcc 52212396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 13302573 - 13302502
Alignment:
Q  220 aatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcag 291  Q
    |||||||| |||| | |||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  13302573 aatgtttacaggtcctatatacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcag 13302502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 13324121 - 13324050
Alignment:
Q  220 aatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcag 291  Q
    ||||||||||||| | ||||||||  ||||||||||||||||| |||||| |||||||||||||||||||||    
T  13324121 aatgtttataggtgctatatacaaccaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcag 13324050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 42559 - 42615
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  42559 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 42615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 13837159 - 13837212
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  13837159 aatcattgagagttagtctcacccttaccttagattgatgaacaaaactctaca 13837212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 16324561 - 16324505
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  16324561 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 16324505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 17240845 - 17240768
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||||||||| |||| ||||||||||||||||   |||||| ||||||||||||||||||||| ||||||    
T  17240845 atgtttacaggttcaatacacaactaggcatctaaaggaattcaaaacaggcatcaacaacaacaattcagatcattc 17240768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 23392847 - 23392782
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  23392847 attgagagttagtctcacccttaccttagattgatgaataaaactctaccaaaaatctgattctcc 23392782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 579
Target Start/End: Complemental strand, 51602556 - 51602503
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  51602556 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctaca 51602503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 577
Target Start/End: Original strand, 11913816 - 11913867
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta 577  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  11913816 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctcta 11913867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 13313229 - 13313158
Alignment:
Q  220 aatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcag 291  Q
    |||||||| |||| | |||||||| || ||||||||||||||| |||||| |||||||||||||||||||||    
T  13313229 aatgtttacaggtcctatatacaactatgcatctaaaggaacacaaaacaggcatcaacaacaacaattcag 13313158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 55291634 - 55291567
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||| ||||||||||||||||||  || |||||||||| ||||||||||||| ||||||||    
T  55291634 atcattgagagatagtctcacccttaccttgaattgatgaacaaatctctacaaaaatcagattctcc 55291567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 18928965 - 18929042
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||| ||||| |||| |||||||||||||||||| |||||| |||| |||||||| ||||||| ||||||    
T  18928965 atgtttacaggtccaatacacaactaggcatctaaaggaacacaaaacaggcattaacaacaataattcagatcattc 18929042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 594
Target Start/End: Complemental strand, 178548 - 178444
Alignment:
Q  492 catgttaaatcaattttcagaagttatata---ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    |||||||||||||||| ||||| ||| |||   ||| ||| ||||| |||||| ||||||||||||||  |  |||||||||||||||||||||||| ||    
T  178548 catgttaaatcaattt-cagaatttacatacacttataattattgaaagttagcctcacccttaccttgaactgatgaacaaagctctacaaaaatcaga 178450  T
Q  589 ttctcc 594  Q
    ||||||    
T  178449 ttctcc 178444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 17240591 - 17240513
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  17240591 tttcaagaacaattcaa-ttagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 17513854 - 17513901
Alignment:
Q  532 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  17513854 tgagtgttagtctcacccttaccttagattgatgaacaaagctctaca 17513901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 579
Target Start/End: Original strand, 13437270 - 13437312
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  13437270 gttagtctcacccttaccttagattgatgaacaaagctctaca 13437312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 10551354 - 10551411
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||| |||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  10551354 gttaatctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 10551411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 11325076 - 11325023
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||||||||    
T  11325076 cattgagagttagtctcacccttaccttgatttgatgaacaaagctctacaaaa 11325023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 579
Target Start/End: Complemental strand, 30123405 - 30123352
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||| |||||||    
T  30123405 aatcattgagagttagcctcaaccttaccttagattgatgaacaaaactctaca 30123352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 13025598 - 13025534
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| |||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  13025598 attgaaagttagcctcacccttactttgaattgatgaacaaagctctacaaaaatcagattctcc 13025534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 15239079 - 15239128
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctct 576  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  15239079 atcattgagagttagtctcacccttaccttgatttgatgaacaaagctct 15239128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 17547492 - 17547435
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| |||||||| |||||  || |||||||||||||||||||||||| ||||||||    
T  17547492 gttagcctcaccctaaccttgaattgatgaacaaagctctacaaaaatcagattctcc 17547435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 18929243 - 18929300
Alignment:
Q  500 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||    
T  18929243 atcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 9534326 - 9534382
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  9534326 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 13029190 - 13029126
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| |||||| ||||||||||| ||  || ||||||||| |||||||||||||| ||||||||    
T  13029190 attgaaagttagcctcacccttactttgaattgatgaacaacgctctacaaaaatcagattctcc 13029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 16828299 - 16828259
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  16828299 tagtcccacccttaccttagattgatgaacaaagctctaca 16828259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 15614688 - 15614719
Alignment:
Q  201 cccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||||||||||    
T  15614688 cccaaacatgtttccaaagaatgtttataggt 15614719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 16801799 - 16801728
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaa-ggaacataaaacatgcatcaacaacaacaattcag 291  Q
    ||||||| |||||| |||||||| || ||||||||| || | | |||||| |||||||||||||||||||||    
T  16801799 atgtttacaggttctatatacaactaagcatctaaaagggatacaaaacaggcatcaacaacaacaattcag 16801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 555
Target Start/End: Complemental strand, 20247845 - 20247791
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  20247845 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 559
Target Start/End: Complemental strand, 23370562 - 23370504
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||| |||||||||||||||    
T  23370562 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttaga 23370504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 555
Target Start/End: Original strand, 24192955 - 24193009
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  24192955 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 16801523 - 16801467
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| |||||||| |  || |||||||| ||||||||||||||||||||    
T  16801523 tcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 22144755 - 22144722
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattcaaaattct 149  Q
    |||||| |||||||||||||||||||||||||||    
T  22144755 ttgcagcgtcgcttaagcgaccattcaaaattct 22144722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 559
Target Start/End: Complemental strand, 24933880 - 24933827
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    |||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 24933827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 14762814 - 14762758
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || || ||||| |||||||||||||||||||    
T  14762814 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 30205639 - 30205576
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||  || || |||| ||||||||| |||||| | ||||||    
T  30205639 attgagagttagtctcacccttaccttgaattgacgaac-aagctctacgaaaatcagtttctcc 30205576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 47984499 - 47984535
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||| |||||||||||||||||||| |||||||||||    
T  47984499 caatacccaaacatgtttccaaagattgtttataggt 47984535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 47993786 - 47993822
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||| |||||||||||||||||||| |||||||||||    
T  47993786 caatacccaaacatgtttccaaagattgtttataggt 47993822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 48003073 - 48003109
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||| |||||||||||||||||||| |||||||||||    
T  48003073 caatacccaaacatgtttccaaagattgtttataggt 48003109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 48012359 - 48012395
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||| |||||||||||||||||||| |||||||||||    
T  48012359 caatacccaaacatgtttccaaagattgtttataggt 48012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 55441324 - 55441257
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    ||||||||||||||||||| || |||| |||| ||| ||||| | || ||||| |||||||||||||||    
T  55441324 tcgcttaagcgaccattcataaatctgcagaa-aaatgttacgggttccacccctttttcacccaaaac 55441257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 378; Significance: 0; HSPs: 4)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 196 - 597
Target Start/End: Complemental strand, 35800 - 35399
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  35800 caatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcggctca 35701  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35700 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 35601  T
Q  396 acatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatg 495  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35600 acatgattctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatg 35501  T
Q  496 ttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcct 595  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35500 ttaaatcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcct 35401  T
Q  596 cc 597  Q
    ||    
T  35400 cc 35399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 34607 - 34525
Alignment:
Q  224 tttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||| |||||||||| |||| |||||||||||||||||| |||||| |||| |||||||||||||||| |||||| |||||||    
T  34607 tttacaggttcaatacacaactaggcatctaaaggaacacaaaacaagcattaacaacaacaattcagatcattctaacaatc 34525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 34377 - 34276
Alignment:
Q  456 aaccctaattccccaattcctatt-tcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 554  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || || ||||| ||||||||||||||||    
T  34377 aaccctaattccc-aatttttattctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacc 34279  T
Q  555 tta 557  Q
    |||    
T  34278 tta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 35894 - 35816
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattca-aaattctggagaacaaaagttacagttttcacccatttttcacccaaaactc 194  Q
    |||||| |||||||||||||||||||| || ||||| |||| ||| ||||| | || ||||| |||||||||||||||||    
T  35894 ttgcagcgtcgcttaagcgaccattcagaatttctgcagaa-aaatgttacgggttccacccctttttcacccaaaactc 35816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 366; Significance: 0; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 204 - 597
Target Start/End: Original strand, 14911784 - 14912177
Alignment:
Q  204 aaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaaca 303  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  14911784 aaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctcattccaaca 14911883  T
Q  304 atcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgatt 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14911884 atcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgatt 14911983  T
Q  404 ctaagcataattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatca 503  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14911984 ctaagcataattaacatgtcacctacacttttcaactcaaaatctgtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatca 14912083  T
Q  504 attttcagaagttatatattacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 597  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14912084 attttcagaagttatatattacaatcattgagagttagtctaacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 14912177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 8834617 - 8834951
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||||| | ||||||    
T  8834617 atgtttacaggttcattacacaataaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagcttattccaacactcttgcaaattctctc 8834716  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    ||||| |||||| ||| ||| || |||||||||||| ||||||| ||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||    
T  8834717 aaatt-tctccagcaa-tcctaatctttcccaattccgattacatcaatgttacaacatcctaaaatcgatctgaacatgattctaagcataattaacat 8834814  T
Q  421 gtctcctaaacttttcaact-caaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttata 519  Q
    |  ||||| ||||||   || ||| | ||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8834815 gattcctacactttttcccttcaataacagtaatagaaccctaattctc-aattcctatttcaagaacaattcatgttaaatcaattttcagaaattata 8834913  T
Q  520 tattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||  ||||||||||||||| |||||||||||||||    
T  8834914 tattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 15307842 - 15308176
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||| |||| ||| ||||||||||||||||||||| ||||||||||  |||||||||||  | ||||||||| ||||| | | ||| ||    
T  15307842 atgtttacaggttcagtatataataaggcatctaaaggaacataaatcatgcatcaattacaacaattcaacttattccaacactcttgtaaattctatc 15307941  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    || |||||  |||||| ||| || ||||||||||||||||||||||||||||||   ||||| ||| ||||||||||| | ||||||||||||| |||||    
T  15307942 aagttctc--caacaa-tcctaatctttcccaattctgattacaacaatgttacagcatcctaaaatcgatctgaacaggtttctaagcataatcaacat 15308038  T
Q  421 gtctcctaaacttttcaact--caaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttat 518  Q
    |  ||||| ||||||   ||  ||||||||||| ||||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  15308039 gattcctacactttttcccttccaaaatcagtaatagaaccctaatt-cataattcctttctcaagaacaattcatgttaaatcaattttcagaaattat 15308137  T
Q  519 atattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||| ||||||||||||||| |||||||||| ||||    
T  15308138 atattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 15244937 - 15245271
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||| |||| ||| || |||||||| ||||||||| ||||||||||| |||||||||||| |  ||||| || ||||| | | ||||||    
T  15244937 atgtttacaggttcagtatataataagccatctaaacgaacataaatcatgcatcaaccacaacaattcagcttgttccatcactcttgtaaattctctc 15245036  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    || |||||  |||||| ||  || ||||||||||||||||||||||||||||||   ||||| ||| ||||||||| | | ||||||||||||| |||||    
T  15245037 aagttctc--caacaa-tcataatctttcccaattctgattacaacaatgttacagcatcctaaaatcgatctgaagaggtttctaagcataatcaacat 15245133  T
Q  421 gtctcctaaacttttcaact--caaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttat 518  Q
    |  ||||| ||||||   ||  ||||||||||| ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  15245134 gattcctacactttttcccttccaaaatcagtaatagaaccctaattcat-aattcctttctcaagaacaattcatgttaaatcaattttcagaaattat 15245232  T
Q  519 atattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  15245233 atattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 223 - 557
Target Start/End: Original strand, 13888366 - 13888697
Alignment:
Q  223 gtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctcaa 322  Q
    ||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||  ||||||||||| | ||| ||||| ||| | | | ||||||||    
T  13888366 gtttacaggttcagtatataataaggcatctaaaggaacataaaacatgcatcaacttcaacaattcagcttatttcaacactctcgtaaattctctcaa 13888465  T
Q  323 attctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgt 422  Q
    | | |||||||||| ||| || ||||||||||||||||||||||||||||||   ||||| ||| ||||| ||||| | |||| || ||||||||||||     
T  13888466 aat-tctccaacaa-tcctaatctttcccaattctgattacaacaatgttacagcatcctaaaatcgatcagaacaggtttctgagtataattaacatga 13888563  T
Q  423 ctcctaaacttttcaact-caaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatata 521  Q
     ||||| ||||||   || |||||||||||  ||||||||||||| | ||||||||| |||| | ||||||||||||||||||||||||||| ||||| |    
T  13888564 ttcctacactttttcccttcaaaatcagtaacagaaccctaattcac-aattcctatctcaa-agcaattcatgttaaatcaattttcagaaattataca 13888661  T
Q  522 ttacaatcattgagagttagtctcacccttacctta 557  Q
    |||  ||||||||||||||| |||||||||||||||    
T  13888662 ttatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 196 - 557
Target Start/End: Original strand, 18213463 - 18213823
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  18213463 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 18213562  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||   |||| |||||   || | ||| || |||||||| | ||| ||||| ||| ||||| |||||||||||  ||| ||| |||| ||| ||||||||    
T  18213563 ttctcccaattttgcaatttcccccaatttttctccaacca-tccgaacctctccaaattcggattacaacaacatta-taattcctaaaatcgatctga 18213660  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||  | ||||||||||| ||||||||||||| |||||||| ||  ||||||||||||||    
T  18213661 atatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcagta-tagaaccctaatt-cccaattcttatttttcaagaacaatt 18213757  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| |||||||||||| | |||||||| |||||||||  ||||| |||||||||||||||    
T  18213758 ctaatcaaaacaattttcagaaatcatatattataatcattgaaggttagcctcacccttacctta 18213823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 456 - 561
Target Start/End: Original strand, 15408093 - 15408198
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    |||||||||| |||||||   |||||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  15408093 aaccctaatttcccaattttcatttcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 15408192  T
Q  556 tagatc 561  Q
    ||||||    
T  15408193 tagatc 15408198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 508 - 594
Target Start/End: Original strand, 14035744 - 14035831
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  14035744 tcagaagttatataatctataatcattgagagttagtctcacccttaccttagatcgatgaacaaagttctac-agaatctgattctcc 14035831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 16370753 - 16370686
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  16370753 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 16370686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 594
Target Start/End: Complemental strand, 21188994 - 21188927
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21188994 aatcattgaaagttaacctcacccttaccttagatcgatgaacaaagctctac-aaaatctgattctcc 21188927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 14486382 - 14486496
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||| |||  |||| ||| |||||||||||||| ||||||  |||||||||||||||||||| |||||| |||||||| ||| | ||||||    
T  14486382 atgtttacaggtttaatgcacaactagacatctaaaggaacacaaaacagacatcaacaacaacaattcagctcattctaacaatctagca-attctctc 14486480  T
Q  321 aaattctctccaacaa 336  Q
     |||| ||||||||||    
T  14486481 caattttctccaacaa 14486496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 15415911 - 15415844
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||| |||||||| ||||||||    
T  15415911 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctccaaaaatcagattctcc 15415844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 15712715 - 15712659
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  15712715 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 15712659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 594
Target Start/End: Original strand, 18230760 - 18230829
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 594  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  18230760 aatcattgagagttagcctcacccttaccttagattgatgaataaaactctaccaaaaatctgattctcc 18230829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 28386275 - 28386331
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  28386275 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 28386331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 336
Target Start/End: Original strand, 13887509 - 13887621
Alignment:
Q  223 gtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctcaa 322  Q
    ||||| ||||| | |||| ||| |||||||||||||||||||||||||||||||||  ||||||||||| | ||| ||||| ||| | | | ||||||||    
T  13887509 gtttacaggtttagtatataataaggcatctaaaggaacataaaacatgcatcaactgcaacaattcagcttatttcaacactctcgtaaattctctcaa 13887608  T
Q  323 attctctccaacaa 336  Q
    | | ||||||||||    
T  13887609 aat-tctccaacaa 13887621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 15407860 - 15407945
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    ||||||| |||| | ||| |||| |||||||| ||||||||| |||||| ||||||| ||||||||||||| |||||| |||||||    
T  15407860 atgtttacaggtcctatacacaactaggcatcgaaaggaacacaaaacaggcatcaaaaacaacaattcagatcattctaacaatc 15407945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 14049605 - 14049696
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||| |||||||||| |||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  14049605 tcagaagttatataatctataattattgagagttggtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 14049696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 15991248 - 15991353
Alignment:
Q  491 tcatgttaaatcaattttcagaagttatata---ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctg 587  Q
    ||||||||||||||||| ||||| ||| |||   ||| ||| ||||| |||||| |||||||||||| |  || |||||||||||||||||||||||| |    
T  15991248 tcatgttaaatcaattt-cagaatttacatacacttataattattgaaagttagcctcacccttaccatgaattgatgaacaaagctctacaaaaatcag 15991346  T
Q  588 attctcc 594  Q
    |||||||    
T  15991347 attctcc 15991353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 20898778 - 20898714
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || |||||||||| ||||||||||||| ||||||||    
T  20898778 attgagagttagcctcacccttaccttgaattgatgaacaaatctctacaaaaatcagattctcc 20898714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 526 - 582
Target Start/End: Complemental strand, 56114793 - 56114737
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||    
T  56114793 aatcattgagagttagcctcacccttaccttagattgatgaacaacgctttacaaaa 56114737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 579
Target Start/End: Complemental strand, 15447403 - 15447354
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  15447403 attgaaagttagcctcactcttaccttagatcgatgaacaaagctctaca 15447354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 594
Target Start/End: Complemental strand, 12729860 - 12729809
Alignment:
Q  543 ctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  12729860 ctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 12729809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 592
Target Start/End: Complemental strand, 16277312 - 16277246
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    ||||||||  |||||| ||||||||||||||  || |||||||||| ||||||||||||| ||||||    
T  16277312 aatcattgcaagttagcctcacccttaccttgaattgatgaacaaatctctacaaaaatcagattct 16277246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 11847828 - 11847909
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaa-caacaacaatt-cagttcattcca 300  Q
    ||||||| |||| | |||||||||||| |||||||||||||| ||||||  |||||| ||||||||||| ||| ||||||||    
T  11847828 atgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatcaaccaacaacaattacagatcattcca 11847909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 33661621 - 33661568
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    ||||||||||||| ||||||||||||||  || ||||||||||||| |||||||    
T  33661621 cattgagagttagcctcacccttaccttgaattgatgaacaaagctgtacaaaa 33661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 13878804 - 13878867
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  13878804 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 13878867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 13882409 - 13882472
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  13882409 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 13882472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 15076384 - 15076448
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||| |||||||||||||||||||  | |||||||||| |||| |||||||| || |||||    
T  15076384 attgagagatagtctcacccttaccttaatttgatgaacaaaactctccaaaaatcagaatctcc 15076448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 15239834 - 15239794
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  15239834 tagtctcacccttaccttagattgaagaacaaagctctaca 15239794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 27905988 - 27906072
Alignment:
Q  222 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||||| |||| | ||| |||| |||||||| ||||||||| |||  |||||| ||||||| |||||||  ||||||||||||||    
T  27905988 tgtttacaggtcctatacacaactaggcatcgaaaggaacacaaagtatgcattaacaacatcaattcaactcattccaacaatc 27906072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 30147942 - 30148033
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||| |||||||||||||||||||||||| || ||| || ||| ||| |||| || |||||||||||||||||    
T  30147942 tcagaagttatataatctataattattgagagttagtctcacccttacttttgattgaagaataaaactcttcagaaaatctgattctcctc 30148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 14911682 - 14911760
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattca-aaattctggagaacaaaagttacagttttcacccatttttcacccaaaactc 194  Q
    |||||| |||||||||||||||||||| || ||||| |||| ||| ||||| | || ||||| |||||||||||||||||    
T  14911682 ttgcagcgtcgcttaagcgaccattcagaatttctgcagaa-aaatgttacgggttccacccctttttcacccaaaactc 14911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 4171907 - 4171969
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  4171907 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 4171969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Complemental strand, 31116288 - 31116226
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  31116288 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 31116226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 576
Target Start/End: Original strand, 32490766 - 32490812
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctct 576  Q
    |||||||||||||||||||||||||||   | |||||||||||||||    
T  32490766 attgagagttagtctcacccttaccttgatttgatgaacaaagctct 32490812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 11848112 - 11848169
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||| | ||||| ||||  || |||||||| ||||||||||||||||||||    
T  11848112 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 15747604 - 15747556
Alignment:
Q  512 aagttatata--ttacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  15747604 aagttatataatttataattattgagagttagtctcacccttaccttag 15747556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 9333564 - 9333501
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || || |||| ||||||||| |||||| ||||||||    
T  9333564 attgagagttagcctcacccttaccttgaattgacgaac-aagctctacgaaaatcagattctcc 9333501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 9387347 - 9387284
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || || |||| ||||||||| |||||| ||||||||    
T  9387347 attgagagttagcctcacccttaccttgaattgacgaac-aagctctacgaaaatcagattctcc 9387284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 555
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  503 aattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||| ||||||||||  ||||||||  | |||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 582
Target Start/End: Original strand, 15069784 - 15069836
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    |||||||| |||||||||||||||||||  | |||||||||| |||| |||||    
T  15069784 attgagagatagtctcacccttaccttaatttgatgaacaaaactctccaaaa 15069836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 557
Target Start/End: Original strand, 17143243 - 17143290
Alignment:
Q  512 aagttatata--ttacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  17143243 aagttatataatttataattattgagagttagtctcacccttacctta 17143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 23270411 - 23270343
Alignment:
Q  123 gtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaa 191  Q
    ||||||||||||||||||||||||| || |||| ||| ||||| | ||| | ||  |||||||||||||    
T  23270411 gtcgcttaagcgaccattcaaaattatgcagaaaaaatgttacgggtttgaaccccttttcacccaaaa 23270343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 581
Target Start/End: Complemental strand, 38979986 - 38979930
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaa 581  Q
    ||||||||  |||||| |||||||||||||||  || ||||||||||||||||||||    
T  38979986 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctacaaa 38979930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 40886035 - 40885960
Alignment:
Q  123 gtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat 199  Q
    |||||||||||||||||||||||||||| || | ||| ||||| |||| || || |||| |||| ||||||| ||||    
T  40886035 gtcgcttaagcgaccattcaaaattctgcagta-aaatgttacggtttccaacccttttccacctaaaactcccaat 40885960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 72 - 582
Target Start/End: Complemental strand, 222707 - 222180
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaact---agcgtcgcttgcagagtcgcttaagcgaccattcaaaatt-ctggagaacaaaagttacag 167  Q
    |||| |||||||||||||| |||||||||||||  |   |||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||    
T  222707 cagcacgcttaagcgtgcagtcatcagacagcactttgcagcgtcgcttgcagagtcgcttaagcgaccattcaaaatttctgcagaa-aaatgttacag 222609  T
Q  168 ttttcacccatttttcacccaaaact--------------cacaatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatct 253  Q
     || ||||| ||||||||||||||||              | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  222608 gttccacccctttttcacccaaaacttccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatct 222509  T
Q  254 aaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaa 353  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  222508 aaaggaacataaaacatgcatcaacaacaacaattcagctctttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaa 222409  T
Q  354 ttctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatcagtatt 453  Q
    |||| ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  222408 ttcttattacattaatgttactaaatccttaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaatcagtatt 222309  T
Q  454 agaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttac 553  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  222308 agaaccctaattccgcaattcttatttcaagagcaattcatgttaaatcaattttcagaagttatatattacaatcattgaaagttagcctcacccttac 222209  T
Q  554 cttagatcgatgaa-caaagctctacaaaa 582  Q
    |||| ||  ||||| |||||||||||||||    
T  222208 ctta-atttatgaatcaaagctctacaaaa 222180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 46625682 - 46626017
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  46625682 atgtttacaggttcaatatacaactaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagctcattccaacaa-cttgcataatctctc 46625780  T
Q  321 aaa-ttctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaaca 419  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||| |||||||||||||||||||||||    
T  46625781 aaaattctctccaacaa-tcccaacctttcccaattctgattacagcaatgttacaaaatcctaaaaacgatatgatcatgattctaagcataattaaca 46625879  T
Q  420 tgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttata 519  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  46625880 tgtctcctacacttttcaactcaaaatcagtattagaaccctaatcccccaattcctattccaagaacaattcatgttaaatcaattttccgaaattata 46625979  T
Q  520 tattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  46625980 tattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 559
Target Start/End: Original strand, 14566899 - 14567260
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    |||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  14566899 caatgcccaaacatgttttcaaagattgtttacaggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 14566998  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttccc-aattctgattacaacaatgttactaaatcctgaaaacgatctg 394  Q
    |||  |||||||||||   || ||||| || |||||||||| ||| ||||| |||| ||||| |||||||||||  ||| ||| |||| ||| |||||||    
T  14566999 ttctcacaatcttgcaatttccctcaatttttctccaacaa-tcctaacctctcccaaattcggattacaacaacatta-taattcctaaaatcgatctg 14567096  T
Q  395 aacatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaat 490  Q
    || ||| |||||||||||||||||||||  ||| ||  ||||||    ||||||||||| ||||||||||||| |||||||| ||  |||||||||||||    
T  14567097 aatatgaattctaagcataattaacatgaatccttactcttttc--tccaaaatcagta-tagaaccctaatt-cccaattcttatttttcaagaacaat 14567192  T
Q  491 tcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    || |  | || ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||||    
T  14567193 tc-taatcaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaga 14567260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 196 - 558
Target Start/End: Original strand, 148315 - 148675
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||  |||    
T  148315 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattagacatctaaagaaacataaaacatgcatcaacagcaacaattcatctca 148414  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || ||||| || |||||||||| ||| ||||| ||  ||||| ||||||| |||  ||| ||| || | ||| ||||||||    
T  148415 ttctcacaatcttgcaatttccctcaatttttctccaacaa-tcctaacctctcgaaattcggattacagcaacatta-taattcataaaatcgatctga 148512  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||    ||||||||||| ||||||||||||| |||||||| ||  ||||||||||||||    
T  148513 atatgaattctaagcataattaacatgaatccttactcttttc--tccaaaatcagta-tagaaccctaatt-cccaattcttatttttcaagaacaatt 148608  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |   | ||| ||||||||||||   |||||||| |||||||||  ||||| ||||||||||||||||    
T  148609 ctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttag 148675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 16479503 - 16479376
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| | |||    
T  16479503 cagcacgcttaagcgtgcattcatcagacagcaactagcgtcgtttgcagcgtcgcttaagcgaccattcaaaattctgcagaacaaaagttacgggttt 16479404  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  16479403 cacccatttttcacccaaaactcccaat 16479376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 15167872 - 15167977
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  15167872 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 15167971  T
Q  295 attcca 300  Q
    ||||||    
T  15167972 attcca 15167977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 18873057 - 18873162
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  18873057 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 18873156  T
Q  295 attcca 300  Q
    ||||||    
T  18873157 attcca 18873162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 196 - 300
Target Start/End: Complemental strand, 10896149 - 10896044
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  10896149 caatgcccaaacatgttttcaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 10896050  T
Q  295 attcca 300  Q
    ||||||    
T  10896049 attcca 10896044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 14422682 - 14422772
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422682 caatgcccaaacatgtttccaaagattgtttataggttcatcatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 14422772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 16009275 - 16009365
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  16009275 caatgcccaaacatgtttccaaagattgtttataggttctttatacaattaggcatttaaaggaacataaaacacgcatcaacaacaacaa 16009365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 13664652 - 13664757
Alignment:
Q  220 aatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctct 319  Q
    |||||||| |||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | ||||||| || |||||||    
T  13664652 aatgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattctagcaatcttacaaaatctct 13664751  T
Q  320 caaatt 325  Q
    | ||||    
T  13664752 ccaatt 13664757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 13679216 - 13679320
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    |||||||||||||||||| | || |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| |  |||||| || ||||||||    
T  13679216 atgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattctataaatcttacaaaatctctc 13679315  T
Q  321 aaatt 325  Q
     ||||    
T  13679316 caatt 13679320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 21231060 - 21230957
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  21231060 aaccctaattccc-aatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 21230962  T
Q  556 tagat 560  Q
    |||||    
T  21230961 tagat 21230957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 7530152 - 7530219
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  7530152 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 7530219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 48744553 - 48744617
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  48744553 attgagagttagcctcacccttaccttgaatcgatgaacaaagctctacaaaaatcagattctcc 48744617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 594
Target Start/End: Original strand, 13256712 - 13256781
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 594  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  13256712 aatcattgagagttagcctcacccttaccttagattgatgaataaaactctaccaaaaatctgattctcc 13256781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 16574266 - 16574330
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  16574266 cattgagagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattctcc 16574330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 594
Target Start/End: Complemental strand, 16591396 - 16591332
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  16591396 cattgagagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattctcc 16591332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 481 - 557
Target Start/End: Complemental strand, 11382947 - 11382871
Alignment:
Q  481 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||| ||||  |||||||||||| ||||||||||  || |||||||| |||||||||||||||||||    
T  11382947 caagaacaattcatattaagacaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 13898495 - 13898559
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| |||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  13898495 attgaaagttagcctcacccttaccttaaattgatgaacaaagctctacaaaaatcagattctcc 13898559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 526 - 594
Target Start/End: Original strand, 15214573 - 15214641
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||| ||||||||||||||  || |||||||| ||||||||||||||| ||||||||    
T  15214573 aatcattgagagttagcctcacccttaccttgaattgatgaacacagctctacaaaaatcagattctcc 15214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 594
Target Start/End: Original strand, 41285064 - 41285118
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  41285064 tagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 41285118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 23556330 - 23556433
Alignment:
Q  491 tcatgttaaatcaattttcagaagttatatat--tacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||||||||||| ||||| ||| |||   || ||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| | |||||||    
T  23556330 tcatgttaaatcaattt-cagaatttacatacactataattattgaaagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctga 23556427  T
Q  589 ttctcc 594  Q
    ||||||    
T  23556428 ttctcc 23556433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 23557519 - 23557622
Alignment:
Q  491 tcatgttaaatcaattttcagaagttatatat--tacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||||||||||| ||||| ||| |||   || ||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| | |||||||    
T  23557519 tcatgttaaatcaattt-cagaatttaaatacactataattattgaaagttagcctcacccttaccttagattgatgaacaaagctctac-ataatctga 23557616  T
Q  589 ttctcc 594  Q
    ||||||    
T  23557617 ttctcc 23557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 571
Target Start/End: Complemental strand, 15727398 - 15727353
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaa 571  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  15727398 aatcattgagagttagtctcacccttaccttagattgatgaacaaa 15727353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 8249277 - 8249213
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  |  |||||||||||||||||||||||| ||||||||    
T  8249277 attgagagttagcctcacccttaccttgaactgatgaacaaagctctacaaaaatcagattctcc 8249213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 557
Target Start/End: Complemental strand, 11389424 - 11389348
Alignment:
Q  481 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||| | ||||  |||||||||||| ||||||||||  || |||||||| |||||||||||||||||||    
T  11389424 caagaacaattcgtattaagacaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 527 - 583
Target Start/End: Original strand, 15726350 - 15726406
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 583  Q
    ||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||    
T  15726350 atcattgagagttagcctcacccttaccttagattgaagaacaaaactctacaaaaa 15726406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 560
Target Start/End: Complemental strand, 20311128 - 20311049
Alignment:
Q  481 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagat 560  Q
    ||||||||||||||||||   |||||||||||| |||||  |||  || |||||||| ||||||||||||||||||||||    
T  20311128 caagaacaattcatgttacgacaattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagat 20311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 593
Target Start/End: Original strand, 42042186 - 42042252
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctc 593  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||||| || |||| |||||    
T  42042186 aatcattgagagttagtctcacccttacctta-attgaagaacaaagctctacataattctggttctc 42042252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 536 - 578
Target Start/End: Complemental strand, 16250243 - 16250201
Alignment:
Q  536 agttagtctcacccttaccttagatcgatgaacaaagctctac 578  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  16250243 agttagtcccacccttaccttagatcgatgaacaaagctctac 16250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 16677024 - 16677093
Alignment:
Q  229 aggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    |||||| |||||||| ||||||||||||||||    ||||| ||||||||||||||||||||| ||||||    
T  16677024 aggttctatatacaactaggcatctaaaggaaacacaaacaggcatcaacaacaacaattcagatcattc 16677093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 17651260 - 17651329
Alignment:
Q  229 aggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    |||||| |||||||| ||||||||||||||||    ||||| ||||||||||||||||||||| ||||||    
T  17651260 aggttctatatacaactaggcatctaaaggaaacacaaacaggcatcaacaacaacaattcagatcattc 17651329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 21231293 - 21231216
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||| | ||| |||| ||| |||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  21231293 atgtttacaggtcctatacacaactagacatctaaaggaacacaaatcaggcatcaacaacaacaattcagatcattc 21231216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 14230504 - 14230588
Alignment:
Q  222 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||||| |||| | ||| |||| |||||||| ||||||||| |||| |||||| ||||||| ||||||||  |||||||||||||    
T  14230504 tgtttacaggtcctatacacaactaggcatcgaaaggaacacaaaatatgcattaacaacatcaattcagcccattccaacaatc 14230588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 39994886 - 39994818
Alignment:
Q  527 atcattgagagttagtctcacccttacctt-agatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||| ||||||| |  | ||||||||||||||| |||||||| ||||||||    
T  39994886 atcattgagagttagtctcacctttaccttgattttgatgaacaaagctctccaaaaatcagattctcc 39994818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 47481539 - 47481456
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattcaaaa-ttctggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat 199  Q
    |||||| ||||||||||||||||||||||| ||||| |||| ||| ||||| | || ||||| ||||||||||||||||| ||||    
T  47481539 ttgcagcgtcgcttaagcgaccattcaaaatttctgcagaa-aaatgttacgggttccacccctttttcacccaaaactcccaat 47481456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 14188314 - 14188260
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    ||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  14188314 gttagcctcacccttaccttagatcgatgaacaaaactctac-agaatctgattct 14188260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 14190912 - 14190858
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    ||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  14190912 gttagcctcacccttaccttagatcgatgaacaaaactctac-agaatctgattct 14190858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 29005095 - 29005142
Alignment:
Q  532 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||    
T  29005095 tgagtgttagtctcacccttaccttagattgatgaacaaatctctaca 29005142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 37726892 - 37726839
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttaga 559  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||    
T  37726892 tcagaagttatataatctaaaatcattgagagttagtctcacccttaccttaga 37726839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 576
Target Start/End: Complemental strand, 12207722 - 12207673
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctct 576  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  12207722 atcattgagagttagtctcacccttaccttgatttgatgaacaaagctct 12207673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 14422983 - 14423040
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  14422983 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 558
Target Start/End: Original strand, 34958562 - 34958614
Alignment:
Q  508 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  34958562 tcagaagttatataatttataattattgagagttagtctcacccttaccttag 34958614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 558
Target Start/End: Complemental strand, 831699 - 831633
Alignment:
Q  493 atgttaaatcaattttcagaagttatata--ttacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||  || ||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  831699 atgttaaatcaaaatt-agaagttatataatttataattattgagagttagtctcacccttaccttag 831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 558
Target Start/End: Complemental strand, 1196879 - 1196813
Alignment:
Q  493 atgttaaatcaattttcagaagttatata--ttacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||  || ||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  1196879 atgttaaatcaaaatt-agaagttatataatttataattattgagagttagtctcacccttaccttag 1196813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 16009575 - 16009631
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  16009575 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 596
Target Start/End: Complemental strand, 16107879 - 16107819
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||||||||| ||| || ||||||| ||||||| ||||||||||| |||||    
T  16107879 gttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattatcctc 16107819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 576
Target Start/End: Complemental strand, 12201115 - 12201068
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctct 576  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||    
T  12201115 cattgagagttagtctcacccttaccttgatttgatgaacaaagctct 12201068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 13320770 - 13320852
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat 199  Q
    |||||| |||||||||||||||||||||||||||  || | ||| ||||| | ||  |||| ||||||||||||||||| ||||    
T  13320770 ttgcagcgtcgcttaagcgaccattcaaaattctacagca-aaatgttacgggttctacccctttttcacccaaaactcccaat 13320852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 559
Target Start/End: Original strand, 31155396 - 31155450
Alignment:
Q  505 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 31155450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 13679491 - 13679548
Alignment:
Q  500 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||| || |||||||| |  |||||||| || |||||||||||||||||||    
T  13679491 atcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 536 - 588
Target Start/End: Original strand, 8777243 - 8777295
Alignment:
Q  536 agttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  8777243 agttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 8777295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 13893480 - 13893520
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  13893480 tagtcccacccttaccttagattgatgaacaaaactctaca 13893520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 14319684 - 14319628
Alignment:
Q  503 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||| ||||| |||| ||||||||| || || || |||||||||||||||    
T  14319684 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttaga 14319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 14319962 - 14319878
Alignment:
Q  222 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||||| |||||| ||| |||||||| |||| ||||||||| |||| |||  | ||||||| |||||||   |||||||||||||    
T  14319962 tgtttacaggttctatacacaattagacatcgaaaggaacacaaaatatgtgttaacaacatcaattcaacccattccaacaatc 14319878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 15168174 - 15168230
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || || ||||| |||||||||||||||||||    
T  15168174 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 24661298 - 24661632
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661298 atgtttacaggttcaatatacaactaggtatctaaaggaacataaaacatacatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 24661397  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||  |||||| |||| ||||||||||||||||||||||||||||||||    
T  24661398 aaattctctccaacat-tcccaacctttcccaattctgattacagcaatgttacagaatcctaaaaatgatctgaacatgattctaagcataattaacat 24661496  T
Q  421 gtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatat 520  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  24661497 gtctcctacacctttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaac-attcatgttaaatcaattttcagaaattatat 24661595  T
Q  521 attacaatcattgagagttagtctcacccttacctta 557  Q
    ||||  ||||| ||||||||| |||||||||||||||    
T  24661596 attatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 196 - 558
Target Start/End: Complemental strand, 6260533 - 6260171
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  6260533 caatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 6260434  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| ||  ||||||||| ||| ||||| ||  ||||| ||||||| |||  ||| ||| |||| ||| | ||||||    
T  6260433 ttctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctctaaattcggattacagcaacatta-taattcctaaaatcaatctga 6260336  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||  | ||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||    
T  6260335 atatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcagta-tagaaccctaattcccaaattcttatttttcaagaacaatt 6260238  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |   | ||| ||||||||||||   |||||||| |||| ||||  ||||| ||||||||||||||||    
T  6260237 ctaatcaaaacaattttcagaaaccatatattataatcgttgaaggttagcctcacccttaccttag 6260171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 196 - 557
Target Start/End: Original strand, 9242657 - 9243016
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||    
T  9242657 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatct-aaggaacataaaacatgcatcaacaacaacaattcatctca 9242755  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| || |||||||||| ||| ||||| ||| ||||  ||||||| |||  ||| ||| |||| ||| ||||||||    
T  9242756 ttctcacaatcttgcaatttcccccaatttttctccaacaa-tcctaacctctccaaatttggattacagcaacatta-taattcctaaaatcgatctga 9242853  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||  | |||||| |||| ||||||||||||| |||||||| ||  ||||||||||||||    
T  9242854 atatgaattctaagcataattaacatgaatccttactcttttcttc-caaaattagta-tagaaccctaatt-cccaattcttatttttcaagaacaatt 9242950  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||    
T  9242951 ctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttacctta 9243016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 19661810 - 19661720
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661810 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 19661720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 6483416 - 6483506
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6483416 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 6483506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 6486883 - 6486973
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6486883 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 6486973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 7508349 - 7508270
Alignment:
Q  120 agagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||    
T  7508349 agagtcgcttaagcgaccattcaaaattctgcagaacaaaagttacgggtttcacccatttttcacccaaaactcccaat 7508270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 594
Target Start/End: Complemental strand, 10039092 - 10039024
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  10039092 aatcattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 10039024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 23063407 - 23063494
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatctt 308  Q
    ||||||| ||||||||||   || |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | |||||||    
T  23063407 atgtttacaggttcaatacttaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattctagcaatctt 23063494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 24161299 - 24161366
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||  |||||||    
T  24161299 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatcaaattctcc 24161366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 530 - 596
Target Start/End: Complemental strand, 24273061 - 24272995
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 596  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||||    
T  24273061 attgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcctc 24272995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 21245705 - 21245769
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  21245705 attgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 21245769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 579
Target Start/End: Original strand, 23375940 - 23375991
Alignment:
Q  528 tcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  23375940 tcattgaaagttagcctcacccttaccttagatcgatgaacaaagctctaca 23375991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 594
Target Start/End: Original strand, 37380539 - 37380593
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  37380539 tagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 37380593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 19802354 - 19802445
Alignment:
Q  508 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    ||||||||| ||||  ||| ||| ||||||||||||||||||||||||||| ||| || ||||||| ||||| | |||||||||||||||||    
T  19802354 tcagaagttctataatttataattattgagagttagtctcacccttacctttgattgaagaacaaaactctagagaaaatctgattctcctc 19802445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 23265119 - 23265197
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23265119 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 23280187 - 23280265
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23280187 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 6477257 - 6477200
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  6477257 gttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 6477200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 25265899 - 25265815
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttca-cccatttttcacccaaaactcacaat 199  Q
    |||||| |||||||||| ||||||||||||||||| |||| ||| ||||| | ||||| ||| ||||||| ||||||||| ||||    
T  25265899 ttgcagtgtcgcttaagtgaccattcaaaattctgtagaaaaaatgttacgggtttcaccccttttttcatccaaaactctcaat 25265815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 25652244 - 25652312
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 594  Q
    ||||||||||||||||| ||||||||||||   | |||||||||||||||| |||||||| ||||||||    
T  25652244 atcattgagagttagtcccacccttaccttgatttgatgaacaaagctctaccaaaaatcagattctcc 25652312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 26904425 - 26904489
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||  |||||||||||||  ||  ||||||||||||||||||||||| ||||||||    
T  26904425 attgagagttagcatcacccttaccttgaatttatgaacaaagctctacaaaaatcagattctcc 26904489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 43093946 - 43093911
Alignment:
Q  18 aataggttgaagaaatgtttaatatctccaatctta 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  43093946 aataggttgaagaaatgtttaatatctccaatctta 43093911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 21908357 - 21908414
Alignment:
Q  500 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||    
T  21908357 atcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 23086421 - 23086474
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| ||||||||||||||||||  | ||||||| |||||||    
T  23086421 aatcattgagagttagcctcacccttaccttagattaaagaacaaaactctaca 23086474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 6483716 - 6483772
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  6483716 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 6487183 - 6487239
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  6487183 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 7508259 - 7508223
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7508259 caatgcccaaacatgtttccaaagattgtttataggt 7508223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 26583551 - 26583630
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattcca 300  Q
    ||||||| |||||| ||| |||| ||||||||||||||||    |||||  |||||||||||||||| ||| ||||||||    
T  26583551 atgtttacaggttctatacacaactaggcatctaaaggaaacacaaacagacatcaacaacaacaatacagatcattcca 26583630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 36982949 - 36982875
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaa 191  Q
    |||||| ||||||||||||||||||| |||||||| |||| ||| ||||| ||||| | ||  |||||||||||||    
T  36982949 ttgcagcgtcgcttaagcgaccattccaaattctgtagaa-aaatgttacggttttgaaccccttttcacccaaaa 36982875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 21908079 - 21908156
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| || | ||||| |||| |||||||||||||||||| |||| | |||| |||| ||| ||||||| ||||||    
T  21908079 atgtttacagttccaatacacaactaggcatctaaaggaacacaaaataggcattaacagcaaaaattcagatcattc 21908156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 593
Target Start/End: Complemental strand, 23338424 - 23338358
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 593  Q
    ||||||||  |||||| |||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  23338424 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctac--aaatctgattctc 23338358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 22110559 - 22110622
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| | ||||||    
T  22110559 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagtttctcc 22110622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 25265804 - 25265768
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25265804 caatgcccaaacatgtttccaaatattgtttataggt 25265768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 27207774 - 27207718
Alignment:
Q  503 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||| ||||| |||| ||||||||| || || || |||||||||||||||    
T  27207774 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttaga 27207718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 212; Significance: 1e-116; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 286 - 557
Target Start/End: Original strand, 12082 - 12352
Alignment:
Q  286 attcagttcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaa 385  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  12082 attcagctcattccaacaatcttgcataatctctcaaattctctccaacaa-tcccaacctttcccaattctgattacagcaatgttaccaaatcctaaa 12180  T
Q  386 aacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaaga 485  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12181 aacaatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaatcagtattagaaccctaattccccaattcgtatttcaaga 12280  T
Q  486 acaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||  ||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||    
T  12281 acaattcatgtggaatcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 1539 - 1601
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 283  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  1539 atgtttacaggttcaatatacaactaggcatctaaaggaacataaagcatgcagcaacaacaa 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 22888 - 22824
Alignment:
Q  127 cttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    |||||||||||||||| ||||||| |||| ||| ||||| | ||||| || |||||||||||||||    
T  22888 cttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaaccctttttcacccaaaac 22824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 212 - 593
Target Start/End: Original strand, 21931411 - 21931788
Alignment:
Q  212 ttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgca 311  Q
    |||||||  ||||||| ||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  21931411 ttccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagctcattccaacgatcttgca 21931510  T
Q  312 taatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcat 411  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||| ||||  ||||||| ||| ||||||||||| ||| ||||| ||    
T  21931511 aaatctctcaaatt-tctccaacaa-tcccaaccttccccaattctgattacagcaacgttataaaatcctaaaatcgatctgaacacgat-ctaagtat 21931607  T
Q  412 aattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcag 511  Q
    |||||||||| |||||| |||||||   ||||||||  || ||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||    
T  21931608 aattaacatgactcctacacttttcctttcaaaatcgataatagaaccctaattctt-aattcctatttcaagatcaattcatgttaaatcaattttcag 21931706  T
Q  512 aagttatatattacaatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 593  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||  || |||||| ||| | ||||||||||||| |||||    
T  21931707 aagttatatattataatcattgagagttagcctcacccttaccttaattcagatgaa-aaaaccctacaaaaatctggttctc 21931788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 212 - 466
Target Start/End: Original strand, 21840115 - 21840366
Alignment:
Q  212 ttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgca 311  Q
    |||||||  ||||||| ||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  21840115 ttccaaaagatgtttacaggttcaatatacagcaaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagctcattccaacgatcttgca 21840214  T
Q  312 taatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcat 411  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||| ||||  ||||||| |||  ||||||||||||| |||||| ||    
T  21840215 aaatctctcaaatt-tctccaacaa-tcccaaccttccccaattctgattacagcaacgttataaaatcctaaaattgatctgaacatga-tctaagtat 21840311  T
Q  412 aattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattc 466  Q
    |||||||||| ||||||  ||||||   |||||||  ||| ||||||||||||||    
T  21840312 aattaacatgactcctatccttttcctttcaaaattggtaatagaaccctaattc 21840366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 211 - 557
Target Start/End: Original strand, 19750263 - 19750605
Alignment:
Q  211 tttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgc 310  Q
    |||||| | |||||||| ||||||  |||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||  | ||||||||| |||||     
T  19750263 tttccagaaaatgtttacaggttctgtatataataaggcatctaaaggaacacaaaacatgcatcaactacaacaattcatcttattccaacactcttgt 19750362  T
Q  311 ataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagca 410  Q
    | | ||||||||||  ||||||||||  |  || ||||||||||||||||||||||||| ||||   ||||| ||| ||||||||||| | |||||| ||    
T  19750363 aaattctctcaaat--tctccaacaatcctaaatctttcccaattctgattacaacaattttacagcatcctaaaatcgatctgaacaggtttctaaaca 19750460  T
Q  411 taattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttc 509  Q
    |||||||||||  ||||| |||||||   |||||||| ||| ||||||||||||| | |||||  ||||| |||||||||||||||| |||| |||||||    
T  19750461 taattaacatgattcctatacttttc-tttcaaaatcggta-tagaaccctaatt-ctcaatttttatttccaagaacaattcatgtaaaattaattttc 19750557  T
Q  510 agaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||| | |||||||| | |||||||  ||||| |||||||||||||||    
T  19750558 agaaatcatatattatagtcattgaaggttagcctcacccttacctta 19750605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 6774798 - 6774671
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||| | |||    
T  6774798 cagcacgcttaagcgtgcattcatcagacaacaactagtgtcgcttgcagagtcgcttaagcaaccattcaaaattctgcataacaaaagttacgggttt 6774699  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  6774698 cacccatttttcacccaaaactcccaat 6774671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 196 - 300
Target Start/End: Complemental strand, 8728091 - 8727986
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  8728091 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 8727992  T
Q  295 attcca 300  Q
    ||||||    
T  8727991 attcca 8727986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 44477321 - 44477411
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44477321 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 44477411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 44492479 - 44492569
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44492479 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 44492569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 24548705 - 24548820
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| ||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||| |||||||||||||| | |||    
T  24548705 cagcacgcttaagcgtgcattcatcagacagcaactagcgtcg------------cttaagcgaccattcaaaattctgcagaacaaaagttacgggttt 24548792  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  24548793 cacccatttttcacccaaaactcccaat 24548820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 14056664 - 14056561
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||| ||| ||  || |||||||| |||||||||||||||||    
T  14056664 aaccctaatttcccaatttttatctcaagaacaattcatgttaaa-caattttcagaatttacatactattattattgagagatagtctcacccttacct 14056566  T
Q  556 tagat 560  Q
    |||||    
T  14056565 tagat 14056561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 560
Target Start/End: Original strand, 25111931 - 25112034
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||| ||| ||  || |||||||| |||||||||||||||||    
T  25111931 aaccctaatttcccaatttttatctcaagaacaattcatgttaaa-caattttcagaatttacatactattattattgagagatagtctcacccttacct 25112029  T
Q  556 tagat 560  Q
    |||||    
T  25112030 tagat 25112034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 306
Target Start/End: Complemental strand, 14056896 - 14056811
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    ||||||| |||| | ||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| |||||||    
T  14056896 atgtttacaggtcctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattctaacaatc 14056811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 25111699 - 25111784
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    ||||||| |||| | ||| |||| || ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  25111699 atgtttacaggtcctatacacaactatgcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattccaacaatc 25111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 508 - 596
Target Start/End: Complemental strand, 21860585 - 21860494
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  21860585 tcagaagttatataatctataatcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 21860494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 29643720 - 29643649
Alignment:
Q  220 aatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcag 291  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||||||| |||||| ||||||||||||||    
T  29643720 aatgtttacaggttcaatacacaactaggcatcaaaaggaacataaaacaggcatcatcaacaacaattcag 29643649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 8413769 - 8413713
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  8413769 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 8413713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 11775745 - 11775801
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  11775745 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 11775801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 18023497 - 18023441
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  18023497 gttagtctcacccttaccttagatcgatgaacaaagctctac-ataatctgattctcc 18023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 18613995 - 18614099
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||| |||| |||| ||| || ||||||||| | |||||| ||||||||||||||||||||| |||||| | ||||||| || ||||||||    
T  18613995 atgtttacaggtttaatacacaactagacacctaaaggaatacaaaacaggcatcaacaacaacaattcagatcattctagcaatcttacaaaatctctc 18614094  T
Q  321 aaatt 325  Q
     ||||    
T  18614095 caatt 18614099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 20387509 - 20387572
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  20387509 attgagagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattctcc 20387572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 526 - 594
Target Start/End: Complemental strand, 22433646 - 22433579
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||||    
T  22433646 aatcattgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattctcc 22433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 526 - 578
Target Start/End: Complemental strand, 42559486 - 42559434
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctac 578  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  42559486 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctac 42559434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 508 - 583
Target Start/End: Complemental strand, 15635146 - 15635069
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 583  Q
    |||||||||||||| |  | ||||||||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  15635146 tcagaagttatataatctaaaatcattgagagttagtatcacccttaccttgaattgatgaacaaagctctacaaaaa 15635069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 526 - 592
Target Start/End: Complemental strand, 20494381 - 20494315
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    |||||||||||||||| ||||||||||||||  || ||||||||| |||||||||||||| ||||||    
T  20494381 aatcattgagagttagcctcacccttaccttgaattgatgaacaacgctctacaaaaatcagattct 20494315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 22617655 - 22617722
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||| | |||||||| ||||||||    
T  22617655 atcattgagagttagtctcacccttaccttgatttgatgaacaaagcttttcaaaaatcagattctcc 22617722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 23482131 - 23482053
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23482131 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 19882979 - 19883035
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  19882979 gttagcctcacccttaccttagatcgatgaacaaaactctac-agaatctgattctcc 19883035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 6774660 - 6774624
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  6774660 caatgcccaaacatgtttccaaagaatgtttataggt 6774624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 532 - 596
Target Start/End: Complemental strand, 22815622 - 22815558
Alignment:
Q  532 tgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 596  Q
    |||||||||| |||||||||||||||||| ||||||  || |||||| ||||||| |||||||||    
T  22815622 tgagagttagcctcacccttaccttagattgatgaatcaaactctaccaaaatctaattctcctc 22815558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 34951458 - 34951498
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34951458 tagtctcacccttaccttagattgatgaacaaagctctaca 34951498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 557
Target Start/End: Original strand, 18614250 - 18614327
Alignment:
Q  479 ttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||||  ||  |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||    
T  18614250 ttcaagaacaattcaa-ttggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 536 - 594
Target Start/End: Complemental strand, 25657535 - 25657478
Alignment:
Q  536 agttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| || ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  25657535 agttactcccacccttactttagatcgatgaacaaagctctac-agaatctgattctcc 25657478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 559
Target Start/End: Original strand, 44477621 - 44477679
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  44477621 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 44477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 559
Target Start/End: Original strand, 44492779 - 44492837
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  44492779 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 44492837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 558
Target Start/End: Complemental strand, 27940953 - 27940851
Alignment:
Q  456 aaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttac 553  Q
    ||||||||||||| ||||| |||||  ||||||||||||   | ||| |||||||||||| | |||||||| |||||||||  ||||| |||||||||||    
T  27940953 aaccctaattccc-aattcttatttttcaagaacaattctaatcaaa-caattttcagaaatcatatattataatcattgaaggttagcctcacccttac 27940856  T
Q  554 cttag 558  Q
    |||||    
T  27940855 cttag 27940851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 15003129 - 15003066
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||| ||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  15003129 attgagagttagtctcactcttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 15003066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 17345419 - 17345455
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17345419 caatgcccaaacatgtttccaaagattgtttataggt 17345455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 22005095 - 22005055
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  22005095 tagtcccacccttaccttagattgatgaacaaagctctaca 22005055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 593
Target Start/End: Original strand, 24980136 - 24980200
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 593  Q
    |||||||||||| ||||||||||||||  || || ||||||||||||||| |||||||| |||||    
T  24980136 attgagagttagcctcacccttaccttgaattgaagaacaaagctctacagaaaatctggttctc 24980200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 594
Target Start/End: Original strand, 36601395 - 36601438
Alignment:
Q  550 ttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  36601395 ttaccttagatcgatgaacaaagctctac-agaatctgattctcc 36601438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 557
Target Start/End: Complemental strand, 38184747 - 38184696
Alignment:
Q  508 tcagaagttatata--ttacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  38184747 tcagaagttatataatttataattattgagagttagtctcacccttacctta 38184696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 44522197 - 44522157
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  44522197 tagtcccacccttaccttagattgatgaacaaagctctaca 44522157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 24548836 - 24548867
Alignment:
Q  201 cccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||||||||||    
T  24548836 cccaaacatgtttccaaagaatgtttataggt 24548867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Complemental strand, 9404929 - 9404867
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  9404929 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 9404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 579
Target Start/End: Complemental strand, 11250795 - 11250761
Alignment:
Q  545 cacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| ||||||||||||||||||    
T  11250795 cacccttaccttagattgatgaacaaagctctaca 11250761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 555
Target Start/End: Original strand, 364884 - 364913
Alignment:
Q  526 aatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||||||||||||||||||||    
T  364884 aatcattgagagttagtctcacccttacct 364913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Complemental strand, 21325797 - 21325764
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagat 560  Q
    ||||||||||||||| ||||||||||||||||||    
T  21325797 atcattgagagttagcctcacccttaccttagat 21325764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 593
Target Start/End: Original strand, 28854836 - 28854902
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 593  Q
    ||||||||  |||||| |||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  28854836 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctac--aaatctgattctc 28854902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 39364918 - 39364975
Alignment:
Q  500 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||| || |||| ||  || |||||||| |||||||||||||||||||    
T  39364918 atcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 21330858 - 21330898
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| |||||| |||||||||||    
T  21330858 tagtcccacccttaccttagattgatgaataaagctctaca 21330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 21966719 - 21966679
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| ||||||||||||| || ||||||||||||||||||    
T  21966719 tagtcccacccttaccttacattgatgaacaaagctctaca 21966679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 21979485 - 21979445
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||| ||||||||||| ||||||||||||||||||    
T  21979485 tagtcccacctttaccttagattgatgaacaaagctctaca 21979445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 21999456 - 21999416
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  21999456 tagtcccacccttaccttagattggtgaacaaagctctaca 21999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 536 - 588
Target Start/End: Complemental strand, 45134130 - 45134078
Alignment:
Q  536 agttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  45134130 agttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 45134078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 183; Significance: 1e-98; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 221 - 447
Target Start/End: Complemental strand, 128991 - 128766
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  128991 atgtttacaggttcaatatacaactaggcatctaaaggaacataaaacatacatcaacaacaacaattcagctcattccaacaatcttgcataatctctc 128892  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  128891 aaattctctccaacaa-tcccaacctttcccaattctgattacagcaatgttacagaatcctaaaaacgatctgaacatgattctaagcataattaacat 128793  T
Q  421 gtctcctaaacttttcaactcaaaatc 447  Q
    |||||||| ||||||||||||||||||    
T  128792 gtctcctacacttttcaactcaaaatc 128766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 116873 - 116951
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  116873 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 60448 - 60511
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  60448 attgagagttagtctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 60511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 177; Significance: 4e-95; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 132501 - 132834
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| | ||||||||| ||||||| | ||||||    
T  132501 atgtttataggttcattatacaataaggcatctaaaggaacacaaaatatgcatcaacaacaacaattcagcttattccaacactcttgcaaattctctc 132600  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacat 420  Q
    ||||| |||||||||| ||| || |||||||||||| ||||||| || |||||| | ||||| ||| |||||||||||||||||||||||||||||||||    
T  132601 aaatt-tctccaacaa-tcctaatctttcccaattccgattacatcagtgttacaacatcctaaaatcgatctgaacatgattctaagcataattaacat 132698  T
Q  421 gtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatat 520  Q
    |  ||||| ||||||   ||  ||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||  ||||||    
T  132699 gattcctacactttttcccttcaaaacagtaatagaaccctaatt-ctcaattcctatttcaagaacaattcatgttaactcaattttcagattttatat 132797  T
Q  521 attacaatcattgagagttagtctcacccttacctta 557  Q
    |||| |||||||||||||||| |||||||||||||||    
T  132798 attataatcattgagagttagcctcacccttacctta 132834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 212 - 557
Target Start/End: Original strand, 121615 - 121958
Alignment:
Q  212 ttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgca 311  Q
    |||||||  ||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  121615 ttccaaaagatgtttaaaggttcattatacaataaggcatctaaaggaacacaaaacatgcatcagcaacaacaattcagcttattccaacactcttgca 121714  T
Q  312 taatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcat 411  Q
     | ||||||||||| |||||||||| ||| || |||||||||||| ||||||| |||||||||   ||||| ||| ||||||||||||||||||||||||    
T  121715 aattctctcaaatt-tctccaacaa-tcctaatctttcccaattccgattacagcaatgttacagcatcctaaaatcgatctgaacatgattctaagcat 121812  T
Q  412 aattaacatgtctcctaaacttttcaact-caaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttca 510  Q
    ||||||||||  ||||| ||||||   || ||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||    
T  121813 aattaacatgattcctacactttttcccttcaaaaacagtaatagaaccctaattctc-aattcctatttcaagaacaattcatgttaactcaattttca 121911  T
Q  511 gaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||  |||||||||| |||||||||||||||| |||||||||||||||    
T  121912 gattttatatattataatcattgagagttagcctcacccttacctta 121958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 212 - 581
Target Start/End: Original strand, 6685 - 7055
Alignment:
Q  212 ttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa---ttcagttcattccaacaatctt 308  Q
    |||||||  ||||||| | |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||   ||||| |||||||||| |||||    
T  6685 ttccaaaagatgtttacaagttcaatatacaataaggcatctaaaggaacacaaaacatacatcaacaacaacaacaattcagctcattccaacgatctt 6784  T
Q  309 gcataatctctcaaattctctccaacaactcccaacctttcccaa-ttctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaa 407  Q
    ||| ||||||||||||| |||||||||| |||||||||| ||||| ||||||||||| ||| ||||  ||||||| ||| |||| |||||| ||||||||    
T  6785 gcaaaatctctcaaatt-tctccaacaa-tcccaaccttccccaaattctgattacagcaacgttataaaatcctaaaatcgatttgaacacgattctaa 6882  T
Q  408 gcataattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattt 507  Q
    ||||||||||||||  ||||| ||| |||   |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  6883 gcataattaacatgattcctacactcttcctttcaaaatcggtaatagaaccctaattctc-aattcctatttcaagaacaattcatgttaaatcaattt 6981  T
Q  508 tcagaagttatatattacaatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaa 581  Q
    |||||||||| |||||| |||||||||||||||| |||||||||| ||||  || |||||||||| |||||||||    
T  6982 tcagaagttagatattataatcattgagagttagcctcacccttatcttaattcagatgaacaaa-ctctacaaa 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 172; Significance: 4e-92; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 212 - 593
Target Start/End: Complemental strand, 2969 - 2592
Alignment:
Q  212 ttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgca 311  Q
    |||||||  ||||||| ||||||| ||| |||  ||||||||||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  2969 ttccaaaagatgtttacaggttcattatgcaacaaggcatctaaaggaacacaaaacatgcatcaacaaaaacaattcagctcattcccacaatcttgca 2870  T
Q  312 taatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcat 411  Q
      |||||||||||| ||||||||   |||||| ||| |||||||||||||||||||| ||||  ||||||| ||| ||||||||||| ||| ||| ||||    
T  2869 atatctctcaaatt-tctccaaccg-tcccaatcttccccaattctgattacaacaacgttataaaatcctaaaatcgatctgaacacgat-ctaggcat 2773  T
Q  412 aattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttca 510  Q
    |||||||||| |||||| ||||||||  |||||||| |||| ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||    
T  2772 aattaacatgactcctacacttttcatttcaaaatcggtat-agaaccctaattctc-aattcttattttcaagaacaattcatgttaaatcaattttca 2675  T
Q  511 gaagttatatattacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 593  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| || || ||| ||||||||||| |||||||| |||||    
T  2674 gaagttatatattataatcattgagagttagcctcacccttacctta-attgaagaataaagctctacacaaaatctggttctc 2592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 1791 - 1882
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||| ||| ||||||| ||||||||| |||||||    
T  1791 tcagaagttatataatctaaaatcattgagagttagtctcacccttacctttgattgaagaaaaaaactctacagaaaatctgagtctcctc 1882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 212 - 593
Target Start/End: Original strand, 447 - 824
Alignment:
Q  212 ttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgca 311  Q
    |||||||  ||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||||||    
T  447 ttccaaaagatgtttacaggttcattatacaactaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagctcattcccgcaatcttgca 546  T
Q  312 taatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcat 411  Q
     ||||||||||||| ||||||||   |||||| ||| ||||||| |||||||||||| ||||  ||||||| ||| ||||||||||| || |||| ||||    
T  547 aaatctctcaaatt-tctccaac-cgtcccaatcttccccaattatgattacaacaacgttataaaatcctaaaatcgatctgaacacga-tctaggcat 643  T
Q  412 aattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattccta-tttcaagaacaattcatgttaaatcaattttca 510  Q
    |||||||||| |||||| ||||||||  |||||||| ||| ||||| ||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  644 aattaacatgactcctacacttttcatttcaaaatctgta-tagaatcctaact-ctcaattcctattttcaagaacaattcatgttaaatcaattttca 741  T
Q  511 gaagttatatattacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 593  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||| || || ||  ||||||||||| |||||||| |||||    
T  742 gaagttatatattataatcattgagagttagcctcacccctacctta-attgaagagtaaagctctacataaaatctggttctc 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 18764 - 18578
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  18764 atgtttacacgttcaatatacaactaggcatctaaaggaacataaaacattcatcatcaacaacaattcagctcattccaacaatcttgcataatctctc 18665  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaag 408  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||| || ||||||||||||||||    
T  18664 aaattctctccaacaa-tcccaacctttcccaattctgattacatcaatgttaccaaatcctaaaaaccatatgaacatgattctaag 18578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 123; Significance: 7e-63; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 196 - 557
Target Start/End: Complemental strand, 71703 - 71343
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  71703 caatgcccatacatgttttcaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 71604  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || ||||| || |||||||||| ||| ||||| ||| ||||| ||||||||||| |||| ||| |||| ||| ||||||||    
T  71603 ttctcacaatcttgcaatttccctcaatttttctccaacaa-tcctaacctctccaaattcggattacaacaacgtta-taattcctaaaatcgatctga 71506  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||  | ||||||||||| ||||||||||||| |||||||| ||  ||||||||||||||    
T  71505 atatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcagta-tagaaccctaatt-cccaattcttatttttcaagaacaatt 71409  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||| |||| | |||| ||| |||||||||  ||||| |||| ||||||||||    
T  71408 cgaatcaaaacaatttttagaaatcatatgttataatcattgaaggttagcctcatccttacctta 71343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 7e-63; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 196 - 557
Target Start/End: Original strand, 16372648 - 16373009
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  16372648 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 16372747  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| ||  ||||||||| ||| ||||| ||| ||||| ||||||| |||  ||| ||| |||| ||| | ||||||    
T  16372748 ttctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctccaaattcggattacagcaacatta-taattcctaaaatcaatctga 16372845  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||  | ||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||    
T  16372846 atatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcagta-tagaaccctaattcccaaattcttatttttcaagaacaatt 16372943  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||    
T  16372944 ctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttacctta 16373009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 41393932 - 41394059
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||| | |||    
T  41393932 cagcacgcttaagcgtgcattcatcagacagcaactagcgtcacttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacgggttt 41394031  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  41394032 cacccatttttcacccaaaactcccaat 41394059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 32651269 - 32651371
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  32651269 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacaggcatcaacaacaacaattcagatca 32651368  T
Q  296 ttc 298  Q
    |||    
T  32651369 ttc 32651371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 11157814 - 11158148
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| |||||||  | |||| |||||||||||||||||| |||||| | || |||||||||||||||| |||||| | |||||||||| || |||||    
T  11157814 atgtttacaggttcagaacacaactaggcatctaaaggaacacaaaacaggtattaacaacaacaattcagatcattctagcaatcttgcaaaacctctc 11157913  T
Q  321 aaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatg-attctaagcataattaaca 419  Q
     ||||||||||||||| ||| || || || ||||||||||| || |||  || |||||   || || | ||||||| ||| |||||||||| | | ||||    
T  11157914 -aattctctccaacaattcctaatctctctcaattctgattccagcaacatt-ctaaacattgtaatcaatctgaatatgaattctaagcacattaaaca 11158011  T
Q  420 tgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgtt-aaatcaattttcagaagttat 518  Q
    ||  ||||| |||||||   |||||||| |   ||||||| ||||| ||||||    || |||||||||||||||||| ||| |||||||||||| ||||    
T  11158012 tgattcctacacttttcctttcaaaatc-ggcctagaaccataatt-cccaatcttcatctcaagaacaattcatgttaaaaacaattttcagaaattat 11158109  T
Q  519 atattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||  |||||||||||||||||||||||||||||||    
T  11158110 atattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 20437381 - 20437291
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437381 caatgcccaaacatgttttcaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 20437291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 45051172 - 45051280
Alignment:
Q  79 cttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccat 178  Q
    ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||  |||||||||||||| | ||||||||||    
T  45051172 cttaagcgtgcattcatcagacagcaactagcgtcg------------cttaagcgaccattcaaaattctacagaacaaaagttacgggtttcacccat 45051259  T
Q  179 ttttcacccaaaactcacaat 199  Q
    |||||||||||||||| ||||    
T  45051260 ttttcacccaaaactcccaat 45051280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 475 - 557
Target Start/End: Original strand, 20805294 - 20805376
Alignment:
Q  475 ctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||    
T  20805294 ctatctcaagaacaatttatgttaaatcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 526 - 594
Target Start/End: Complemental strand, 21180311 - 21180244
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  21180311 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 21180244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 530 - 597
Target Start/End: Original strand, 18271345 - 18271412
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 597  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  18271345 attgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatctgattctcctcc 18271412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 597
Target Start/End: Original strand, 18275999 - 18276066
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 597  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||    
T  18275999 attgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaatatctgattctcctcc 18276066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 19663618 - 19663517
Alignment:
Q  456 aaccctaattccccaattcctatt-tcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 554  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || || ||||| ||||||||||||||||    
T  19663618 aaccctaattccc-aatttttattctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacc 19663520  T
Q  555 tta 557  Q
    |||    
T  19663519 tta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 18712521 - 18712598
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||||||||| |||| |||||||||||||||||| ||||||  |||||||||||||||||| | ||||||    
T  18712521 atgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacagacatcaacaacaacaattctgatcattc 18712598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 13227890 - 13227981
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||| ||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  13227890 tcagaagttatataatctataattattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 13227981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 20902157 - 20902221
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || |||||||||||| ||||||||||| ||||||||    
T  20902157 attgagagttagcctcacccttaccttgaattgatgaacaaagcgctacaaaaatcagattctcc 20902221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 539 - 594
Target Start/End: Complemental strand, 635022 - 634968
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  635022 tagtctcacccttaccttagatcgatgaacaaaactctac-agaatctgattctcc 634968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Complemental strand, 7791584 - 7791537
Alignment:
Q  532 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7791584 tgagtgttagtctcacccttaccttagattgatgaacaaagctctaca 7791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 8686049 - 8686114
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||   | ||||||||||||||| |||||||| | ||||||    
T  8686049 cattgagagttagtctcacccttaccttgatttgatgaacaaagctcttcaaaaatcagtttctcc 8686114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 28203784 - 28203731
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    ||||||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  28203784 cattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaa 28203731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 557
Target Start/End: Original strand, 18712775 - 18712854
Alignment:
Q  477 atttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| ||||||||||| |||||||    
T  18712775 atttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 582
Target Start/End: Original strand, 21660394 - 21660446
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  21660394 attgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaa 21660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 21526814 - 21526747
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||| ||||||||||||||||  | ||||||||||||| | ||| |||| ||||||||    
T  21526814 atcattgagagttattctcacccttaccttaatttgatgaacaaagctttccaagaatcagattctcc 21526747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 32651549 - 32651627
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||| |||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  32651549 tttcaagaacaactcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 13527735 - 13527678
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||| |||| |||||||||  || |||||||||||||||||||||||| ||||||||    
T  13527735 gttagcctcatccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 13527678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 20437080 - 20437024
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  20437080 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 45051296 - 45051327
Alignment:
Q  201 cccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||||||||||    
T  45051296 cccaaacatgtttccaaagaatgtttataggt 45051327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 593
Target Start/End: Original strand, 297383 - 297449
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 593  Q
    ||||||||  |||||| |||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  297383 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctac--aaatctgattctc 297449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 582
Target Start/End: Original strand, 24476353 - 24476405
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    |||||||| |||||||||||||||||||  | |||||||||| |||| |||||    
T  24476353 attgagagatagtctcacccttaccttaatttgatgaacaaaactctccaaaa 24476405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 41394070 - 41394106
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  41394070 caatgcccaaatatgtttccaaataatgtttataggt 41394106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 1e-61; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 196 - 558
Target Start/End: Original strand, 42961263 - 42961622
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  42961263 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 42961362  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || ||||| || |||||||||| ||| ||||| ||| ||||| ||||||| |||  ||| ||| |||| ||| ||||||||    
T  42961363 ttctcacaatcttgcaatttccctcaatttttctccaacaa-tcctaacctctccaaattcggattacagcaacatta-taattcctaaaatcgatctga 42961460  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||    ||||||||||| |||||||||||||  ||||||| ||  |||| |||||||||    
T  42961461 atatgaattctaagcataattaacatgaatccttactcttttc--tccaaaatcagta-tagaaccctaatt-tccaattcttatttttctagaacaatt 42961556  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    | |  | || |||||||||||| | |||||||| |||||||||  ||||| ||||||||||||||||    
T  42961557 c-taatcaaacaattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttag 42961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 557
Target Start/End: Original strand, 22337217 - 22337578
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  22337217 caatgcccaaacatgtttccaaagattgtttataagttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 22337316  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| ||  ||||||||| ||| ||||| ||| ||||| ||||||| |||  ||| ||| |||| ||| | ||||||    
T  22337317 ttctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctccaaattcggattacagcaacatta-taattcctaaaatcaatctga 22337414  T
Q  396 acatg-attctaagcataattaacatg-tctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||   || ||  ||||||  | ||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||    
T  22337415 atatgaattctaagcataattaacatgaattcttactcttttcttc-caaaatcagta-tagaaccctaattcccaaattcttatttttcaagaacaatt 22337512  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||||||||   |||||||| |||||||||  |||||||||||||||||||||    
T  22337513 ctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagtctcacccttacctta 22337578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 196 - 557
Target Start/End: Original strand, 22340755 - 22341116
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  22340755 caatgcccaaacatgtttccaaagattgtttataagttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 22340854  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| ||  ||||||||| ||| ||||| ||| ||||| ||||||| |||  ||| ||| |||| ||| | ||||||    
T  22340855 ttctcacaatcttgcaatttcccccaattttcctccaacaa-tcctaacctctccaaattcggattacagcaacatta-taattcctaaaatcaatctga 22340952  T
Q  396 acatg-attctaagcataattaacatg-tctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||   || ||  ||||||  | ||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||    
T  22340953 atatgaattctaagcataattaacatgaattcttactcttttcttc-caaaatcagta-tagaaccctaattcccaaattcttatttttcaagaacaatt 22341050  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||    
T  22341051 ctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttacctta 22341116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 77 - 291
Target Start/End: Complemental strand, 23111679 - 23111463
Alignment:
Q  77 cgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcaccc 176  Q
    ||||||||||||||||||||||||| |||||||||||||||            ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23111679 cgcttaagcgtgcattcatcagacaacaactagcgtcgctt------------aagcgaccattcaaaattctgcagaacaaaagttacggttttcaccc 23111592  T
Q  177 atttttcacccaaaactcacaat--------------gcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaaca 262  Q
    |||||||||||||||||| ||||              ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  23111591 atttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttatcggttcaatatacaattaggcatctaaatgaaca 23111492  T
Q  263 taaaacatgcatcaacaacaacaattcag 291  Q
    |||||||||||||||||||||||||||||    
T  23111491 taaaacatgcatcaacaacaacaattcag 23111463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 28370411 - 28370321
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370411 caatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 28370321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 22750838 - 22750943
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttc 294  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  22750838 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattacagatc 22750937  T
Q  295 attcca 300  Q
    ||||||    
T  22750938 attcca 22750943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 38144893 - 38144803
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38144893 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaagaacaacaa 38144803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 19512084 - 19512174
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19512084 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 19512174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 29190803 - 29190688
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| |||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||| | |||||||||||| | |||    
T  29190803 cagcacgcttaagcgtgcattcatcagacagcaactagcgtcgctt------------aagcgaccattcaaaattctgcataacaaaagttacgggttt 29190716  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  29190715 cacccatttttcacccaaaactcccaat 29190688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 560
Target Start/End: Complemental strand, 22438824 - 22438745
Alignment:
Q  481 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagat 560  Q
    |||||||||||||||||||  |||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||||    
T  22438824 caagaacaattcatgttaagacaattttcagaaattatacattatgattattgagagatagtctcacccttaccttagat 22438745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 508 - 593
Target Start/End: Original strand, 17813483 - 17813571
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 593  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||| ||||||||||||||    
T  17813483 tcagaagttatataatctataatcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctc 17813571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 33472584 - 33472528
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  33472584 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 33472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 36461064 - 36461117
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36461064 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctaca 36461117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 18408022 - 18407944
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||||  || |||||||| |||||||||||||||||||    
T  18408022 tttcaagaacaattcaa-ttagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 18408269 - 18408200
Alignment:
Q  229 aggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| | ||||| |||||||||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  18408269 aggttcattgtacaactaggcatctaaaggaacacaaaacaggcattaacaacaacaattcagatcattc 18408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 579
Target Start/End: Complemental strand, 21980098 - 21980045
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  21980098 aatcattgagagttggcctcacccttaccttagattgatgaacaaagctctaca 21980045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 530 - 579
Target Start/End: Complemental strand, 22356931 - 22356882
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  22356931 attgagagttagcctcacccttaccttagattgatgaacaaagctctaca 22356882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 23111278 - 23111200
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23111278 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 530 - 592
Target Start/End: Complemental strand, 21663170 - 21663109
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  21663170 attgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattct 21663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 26707396 - 26707462
Alignment:
Q  529 cattgagagttagtctcacccttacctt-agatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||| |  | ||||||||||||||| |||||||| ||||||||    
T  26707396 cattgagagttagtctcacccttaccttgattttgatgaacaaagctctccaaaaatcagattctcc 26707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 26977130 - 26977196
Alignment:
Q  529 cattgagagttagtctcacccttacctt-agatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||| |  | ||||||||||||||| |||||||| ||||||||    
T  26977130 cattgagagttagtctcacccttaccttgattttgatgaacaaagctctccaaaaatcagattctcc 26977196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 594
Target Start/End: Complemental strand, 21553418 - 21553354
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||  | |||||||||||||    
T  21553418 cattgagagttagcctcacccttaccttagattgatgaacaaaactcta-tagaatctgattctcc 21553354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 593
Target Start/End: Complemental strand, 24276530 - 24276462
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctc 593  Q
    |||||||||||||||| |||||||||||||||||| ||||||  || ||||| ||||||| ||||||||    
T  24276530 aatcattgagagttagcctcacccttaccttagattgatgaatcaaactctaccaaaaatatgattctc 24276462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 526 - 593
Target Start/End: Original strand, 24385683 - 24385751
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctc 593  Q
    |||||||||||||||| |||||||||||||||||| ||||||  || ||||| ||||||| ||||||||    
T  24385683 aatcattgagagttagcctcacccttaccttagattgatgaatcaaactctaccaaaaatatgattctc 24385751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 38144593 - 38144536
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  38144593 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 7786200 - 7786268
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctc-tacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||   | |||||||||| ||| | |||||||| ||||||||    
T  7786200 atcattgagagttagtctcacccttaccttgatttgatgaacaaaactcttccaaaaatcagattctcc 7786268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 19512385 - 19512441
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  19512385 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 557
Target Start/End: Complemental strand, 28370111 - 28370055
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  28370111 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 557
Target Start/End: Original strand, 6766779 - 6766810
Alignment:
Q  526 aatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||||||||||||||||||    
T  6766779 aatcattgagagttagtctcacccttacctta 6766810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 82
Target Start/End: Complemental strand, 23111715 - 23111685
Alignment:
Q  52 tactgtgactgcacgcttaccagctcgctta 82  Q
    |||||||||||||||||||||||||||||||    
T  23111715 tactgtgactgcacgcttaccagctcgctta 23111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 43122047 - 43122109
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  43122047 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 43122109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 43125580 - 43125642
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  43125580 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 43125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 34939040 - 34939116
Alignment:
Q  123 gtcgcttaagcgaccattcaaaa-ttctggagaacaaaagttacagttttcacccatttttcacccaaaactcacaat 199  Q
    |||||| |||||||||||||||| ||||| |||| ||| ||||| | || ||||| ||||||||||||||||| ||||    
T  34939040 gtcgctaaagcgaccattcaaaatttctgcagaa-aaatgttacgggttccacccctttttcacccaaaactcccaat 34939116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 593
Target Start/End: Complemental strand, 17021941 - 17021877
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 593  Q
    |||||||| |||||||||||||||||||||| || | ||| | ||||||| |||||||| |||||    
T  17021941 attgagagatagtctcacccttaccttagattgaaggacagaactctacagaaaatctggttctc 17021877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  506 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 29190669 - 29190641
Alignment:
Q  204 aaacatgtttccaaagaatgtttataggt 232  Q
    |||||||||||||||||||||||||||||    
T  29190669 aaacatgtttccaaagaatgtttataggt 29190641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 119; Significance: 2e-60; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 557
Target Start/End: Original strand, 34135 - 34495
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||    
T  34135 caatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcatcaacaacaattcatctca 34234  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| || |||||||||| ||| ||||| ||| ||||| ||||||| |||  ||| ||| |||| ||| ||||||||    
T  34235 ttctcacaatcttgcaatttcccccaatttttctccaacaa-tcctaacctctccaaattcggattacagcaacatta-taattcctaaaatcgatctga 34332  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||||||||||  ||| ||  ||||||  | ||||||||||| ||||||||||||| |||||||| ||  ||||||||||||||    
T  34333 atatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcagta-tagaaccctaatt-cccaattcttatttttcaagaacaatt 34429  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||||||||   |||||||| |||| ||||  ||||| |||||||||||||||    
T  34430 ctaatcaaaacaattttcagaaaccatatattataatctttgaaggttagcctcacccttacctta 34495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 456 - 560
Target Start/End: Original strand, 135427 - 135531
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  135427 aaccctaatttcccaatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 135526  T
Q  556 tagat 560  Q
    |||||    
T  135527 tagat 135531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 135227 - 135279
Alignment:
Q  254 aaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||    
T  135227 aaaggaacacaaaacaggcatcaacaacaacaattcagatcattccagcaatc 135279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 221 - 522
Target Start/End: Complemental strand, 81547 - 81246
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||||||||||| | |||| |    
T  81547 atgtttacaggttcagtacacaactaggcatctaaaggaacataaaacaggcatcaacaacaacaattcagctcatactaacaatcttgcaaattctcac 81448  T
Q  321 aaattctctccaacaactcccaacctttc-ccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatg-attctaagcataattaac 418  Q
    |||||||||||||||| ||| || ||  | | ||||||||||||| |||| || ||||||  ||||| | ||||||||| | |||||||||| | | |||    
T  81447 aaattctctccaacaaatcctaatctccctcaaattctgattacagcaatatt-ctaaattttgaaatcaatctgaacacgaattctaagcacattaaac 81349  T
Q  419 atgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttat 518  Q
    |||  ||||| |||||||   |||||||||||| ||||||||||||| | || ||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  81348 atgattcctacacttttcccttcaaaatcagtaatagaaccctaatt-cacatttcctatctcaagaacaatttatgttaaatcaattttcagaaattat 81250  T
Q  519 atat 522  Q
    ||||    
T  81249 atat 81246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 221 - 557
Target Start/End: Original strand, 51968 - 52304
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| ||||||| || |||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||    
T  51968 atgtttacaggttcagtacacaactaggcatcttaaggaacataaaacaggcatcaacaacaacaattcagctcattctaacaatcttgcaaaatctctc 52067  T
Q  321 aaattctctccaacaactcccaacctttc-ccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatg-attctaagcataattaac 418  Q
    ||| | |||||||||| ||| || ||  | | ||||||||||||| |||| || ||| || |||||| | ||||||||||| |||||||||| | | |||    
T  52068 aaactttctccaacaaatcctaatctccctcaaattctgattacagcaatatt-ctagattctgaaatcaatctgaacatgaattctaagcacattaaac 52166  T
Q  419 atgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttat 518  Q
    |||  ||||| |||||||   |||||||| ||| |||||||||||||| | | ||    ||||||||||||||||  | ||||||||||||| || | ||    
T  52167 atgattcctacacttttcctttcaaaatcggta-tagaaccctaattctcgatttttattttcaagaacaattcaaatcaaatcaattttcataaatcat 52265  T
Q  519 atattacaatcattgagagttagtctcacccttacctta 557  Q
    |||||| |||||||||  ||||| |||||||||||||||    
T  52266 atattataatcattgaaggttagcctcacccttacctta 52304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 196 - 557
Target Start/End: Complemental strand, 9131 - 8770
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttca 295  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||    
T  9131 caatgccgaaacatgtttccaaagattgtttataggttcattatacaattaagcatctaaaggaacataaaacatgcatcaacaacaacaattcatctca 9032  T
Q  296 ttccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctga 395  Q
    |||  |||||||||||   || | ||| || |||||||| | ||| ||||| ||| |||||  |||||| |||  ||| ||| |||| |||  |||||||    
T  9031 ttctcacaatcttgcaatttcccccaatttttctccaacca-tcctaacctctccaaattcgaattacagcaacatta-taattcctaaaattgatctga 8934  T
Q  396 acatg-attctaagcataattaacatgtctcc-taaacttttcaactcaaaatcagtattagaaccctaattccccaattccta--tttcaagaacaatt 491  Q
    | ||| |||||||||||||| ||||||  ||| ||  ||||||  | ||||||||||| |||||||||||||| | ||||| ||  ||||||||||||||    
T  8933 atatgaattctaagcataatcaacatgaatccttactcttttcttc-caaaatcagta-tagaaccctaattctcaaattcttatttttcaagaacaatt 8836  T
Q  492 catgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    |   | ||| ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||    
T  8835 ctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttacctta 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 315 - 556
Target Start/End: Complemental strand, 39746 - 39508
Alignment:
Q  315 tctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataat 414  Q
    ||||||||||||||  |||||| ||| || ||||||||||||||||||||||||||||||   ||||| ||| ||||||||||| | |||||||||||||    
T  39746 tctctcaaattctc--caacaa-tcctaatctttcccaattctgattacaacaatgttacagcatcctaaaatcgatctgaacaggtttctaagcataat 39650  T
Q  415 taacatgtctcctaaacttttcaact-caaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaa 513  Q
     ||||||  ||||| ||||||   || ||||||||||| ||| |||||||||| | ||||||||| ||||||||||||||  |||||||||||||| |||    
T  39649 caacatgattcctacactttttcccttcaaaatcagtagtagtaccctaattcac-aattcctatctcaagaacaattcaatttaaatcaattttctgaa 39551  T
Q  514 gttatatattacaatcattgagagttagtctcacccttacctt 556  Q
     ||||||||||  ||||||||||||||| ||||||||||||||    
T  39550 attatatattatgatcattgagagttagcctcacccttacctt 39508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 96; Significance: 9e-47; HSPs: 3)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 16787 - 16660
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||| | |||    
T  16787 cagcacgcttaagcgtgcattcatcagacagcaactagcttcgcttgcagtgtcgcttaagcgaccattcaaaattctgcataacaaaagttacgggttt 16688  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||||||||||||||||||||| ||||    
T  16687 cacccatttttcacccaaaactcccaat 16660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 16649 - 16613
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  16649 caatgcccaaacatgtttccaaagaatgtttataggt 16613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 82
Target Start/End: Complemental strand, 16818 - 16788
Alignment:
Q  52 tactgtgactgcacgcttaccagctcgctta 82  Q
    |||||||||||||||||||||||||||||||    
T  16818 tactgtgactgcacgcttaccagctcgctta 16788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 34952 - 34834
Alignment:
Q  72 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | |||||||||||||| | |||    
T  34952 cagctcgcttaagcgtgcattcatcagacagcaactagcgtcacttgcagcgtcgcttaagcgaccattcaaaattccgcagaacaaaagttacgggttt 34853  T
Q  172 cacccatttttcacccaaa 190  Q
    ||||| |||||||||||||    
T  34852 cacccctttttcacccaaa 34834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 211 - 557
Target Start/End: Original strand, 1780 - 2115
Alignment:
Q  211 tttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgc 310  Q
    |||||| | |||||||| |||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||  | ||||||||    
T  1780 tttccataaaatgtttacaggttctatatataataaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcaactcattcttaaaatcttgc 1879  T
Q  311 ataatctctcaaattctctccaacaactcccaacctttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatg-attctaagc 409  Q
    | ||||||| ||||| |||||||||| ||| ||||| ||| ||||||||||||| |||  ||| |||||          ||||||| | | ||||| |||    
T  1880 aaaatctctgaaattttctccaacaa-tcctaacctctccaaattctgattacagcaacatta-taaat--------taatctgaatacgaattctcagc 1969  T
Q  410 ataattaacatgtctcctaaacttttcaactcaaaatcagtattagaaccctaattccccaattccta-tttcaagaacaattcatgttaaatcaatttt 508  Q
    | ||||||||||   | ||  | ||||   || ||||||||| ||||||||||||| |||||||  || ||||||||||||||||| |||| ||||||||    
T  1970 acaattaacatgatccttactcatttc-tttcgaaatcagta-tagaaccctaatt-cccaatttttattttcaagaacaattcatattaagtcaatttt 2066  T
Q  509 cagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  2067 cagaaattatataatacaatcattgagagttagcctcagccttacctta 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 255 - 557
Target Start/End: Original strand, 69500 - 69801
Alignment:
Q  255 aaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctcaaattctctccaacaactcccaacctttc-ccaa 353  Q
    ||||| |||||||||||||||||||||||||||| || | |||| |||||||||||| ||||| ||||||| |||||||||| ||| || ||  | | ||    
T  69500 aaggagcataaaacatgcatcaacaacaacaatttagattattctaacaatcttgcaaaatctttcaaattttctccaacaaatcctaatctccctcaaa 69599  T
Q  354 ttctgattacaacaatgttactaaatcctgaaaacgatctgaacatg-attctaagcataattaacatgtctcctaaacttttcaactcaaaatcagtat 452  Q
    |||||||| || |||  || ||||||  || || | ||||||| ||| |||||||||| | | ||||||  ||||| |||||||   |||||||| |       
T  69600 ttctgattccagcaacatt-ctaaatattgtaatcaatctgaatatgaattctaagcacattaaacatgattcctacacttttcctttcaaaatc-ggcc 69697  T
Q  453 tagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcaccctta 552  Q
    ||||||||||||| ||||||   ||| ||||||||||||||||||||||   |||||| || ||||||||||  |||||||| |||||||||||||||||    
T  69698 tagaaccctaatt-cccaatctttatctcaagaacaattcatgttaaattttttttcataaattatatattaagatcattgaaagttagtctcaccctta 69796  T
Q  553 cctta 557  Q
    |||||    
T  69797 cctta 69801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 79311 - 79378
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||||| ||||| || |||||||||||||||    
T  79311 tcgcttaagcgaccattcataattctgcagaa-aaatgttacaggtttcaaccctttttcacccaaaac 79378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 9937 - 10033
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgca-tcaacaacaacaattcag 291  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9937 caatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaatgaacataaaacatgcattcaacaacaacaattcag 10033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 3e-34; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 196 - 286
Target Start/End: Original strand, 111384 - 111474
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  111384 caatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaaggaacataaaacatgcatcaacaacaacaa 111474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 12184 - 12104
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttcattcca 300  Q
    ||||||| |||| | |||||||| |||||||||||||||||| ||||||  ||||||||||||||||| ||| ||||||||    
T  12184 atgtttacaggtcctatatacaactaggcatctaaaggaacacaaaacagccatcaacaacaacaattacagatcattcca 12104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 559
Target Start/End: Original strand, 111684 - 111742
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  111684 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 111742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 11907 - 11850
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  11907 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 10553 - 10463
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  10553 caatgcccaaacatgtttccaaagattgtttataggttcattatacaataagacatctaaaggaacataaaacacgcatcaacaacaacaa 10463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 559
Target Start/End: Complemental strand, 10252 - 10194
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||| |||||||||||||||    
T  10252 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttaga 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 1883 - 1793
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaa 286  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  1883 caatgcccaaacatgtttccaaagattgtttataggttcattatacaataagacatctaaaggaacataaaacacgcatcaacaacaacaa 1793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 559
Target Start/End: Complemental strand, 1582 - 1524
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||| |||||||||||||||    
T  1582 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttaga 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 454 - 557
Target Start/End: Complemental strand, 15099 - 14997
Alignment:
Q  454 agaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttac 553  Q
    ||||||||||||||| |||   ||| ||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  15099 agaaccctaattccc-aatctttatctcaagaacaattcatgttaaaacaattttcagaaattatatattaagatcattgagagttagtctcacccttac 15001  T
Q  554 ctta 557  Q
    ||||    
T  15000 ctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 15331 - 15227
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    ||||||| |||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | ||||||| || ||||||||    
T  15331 atgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattctagcaatcttacaaaatctctc 15232  T
Q  321 aaatt 325  Q
     ||||    
T  15231 caatt 15227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 40633 - 40529
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  40633 aaccctaatttcccaatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 40534  T
Q  556 tagat 560  Q
    |||||    
T  40533 tagat 40529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 1109 - 1213
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatcttgcataatctctc 320  Q
    |||||||||||||||||| | || |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| |  |||||| || ||||||||    
T  1109 atgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattctataaatcttacaaaatctctc 1208  T
Q  321 aaatt 325  Q
     ||||    
T  1209 caatt 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 1384 - 1441
Alignment:
Q  500 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||| || |||||||| |  |||||||| || |||||||||||||||||||    
T  1384 atcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 8728 - 8602
Alignment:
Q  76 tcgcttaagcgtgcattcatcagacagcaact----agcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagtttt 171  Q
    |||||||||||  || ||||||||||||||||    ||||||||||| |  |||||||||||||||||||||||||||| |||| ||| ||||| | |||    
T  8728 tcgcttaagcgaacagtcatcagacagcaactttgcagcgtcgcttgtatcgtcgcttaagcgaccattcaaaattctgtagaa-aaatgttacgggttt 8630  T
Q  172 cacccatttttcacccaaaactcacaat 199  Q
    ||||| ||||||||||||||||| ||||    
T  8629 cacccctttttcacccaaaactcccaat 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 8591 - 8555
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8591 caatgcccaaacatgtttccaaagattgtttataggt 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 341 - 264
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  341 atgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacatgcattaacaacaacaattcagatcattc 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 86 - 8
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  86 tttcaagaacaattcaa-ttagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 18918 - 19035
Alignment:
Q  77 cgcttaagcgtgcattcatcagacagcaact----agcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttc 172  Q
    |||||||||||||| |||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||| |||||     
T  18918 cgcttaagcgtgcagtcatcagacaacaactttgcagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgca-aaaaaatgttacggttttg 19016  T
Q  173 acccatttttcacccaaaa 191  Q
    | ||  |||||||||||||    
T  19017 aaccccttttcacccaaaa 19035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 21002 - 21119
Alignment:
Q  77 cgcttaagcgtgcattcatcagacagcaact----agcgtcgcttgcagagtcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttc 172  Q
    |||||||||||||| |||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||| |||||     
T  21002 cgcttaagcgtgcagtcatcagacaacaactttgcagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgca-aaaaaatgttacggttttg 21100  T
Q  173 acccatttttcacccaaaa 191  Q
    | ||  |||||||||||||    
T  21101 aaccccttttcacccaaaa 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 102261 - 102186
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcat 296  Q
    ||||||| |||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  102261 atgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcat 102186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 102006 - 101928
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||| | ||||||| ||  || |||||||| |||||||||||||||||||    
T  102006 tttcaagaacaattcaa-ttagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 1428 - 1504
Alignment:
Q  480 tcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||||||| |||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||||    
T  1428 tcaagaacaattcatgttaaaacaattt-cagaaattatacattaagatcattgagagttagtctcacccttacctta 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 22926 - 22849
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||| | ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  22926 atgtttacaggtccgatacacaactaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcaggtcattc 22849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 556
Target Start/End: Complemental strand, 22693 - 22594
Alignment:
Q  456 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||| | |||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  22693 aaccctaattccc-aatttttatctcaagaacaattcatgttaaaacgattttcagaaattatatactatgattattgagagatagtctcacccttacct 22595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 15268 - 15198
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcag 291  Q
    ||||||| |||| | ||| |||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  15268 atgtttacaggtcctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaacaattcag 15198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 16542 - 16619
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattc 298  Q
    ||||||| |||||||||| |||| |||||||||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  16542 atgtttacaggttcaatacacaactaggcatctaaaggaacgcaaaacaggcatcaacaacaacaattcagatcattc 16619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 16797 - 16875
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  16797 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 594
Target Start/End: Original strand, 1159 - 1226
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  1159 aatcattgagagttagcctcacccttaccttagattgataaacaaagctctac-aaaatctgattctcc 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 594
Target Start/End: Original strand, 7978 - 8046
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  7978 aatcattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 3793 - 3884
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  3793 tcagaagttatataatctataatcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 596
Target Start/End: Complemental strand, 15015 - 14946
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 596  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  15015 aatcattgagagttagcctcacgcttaccttagattgatgaacaaagctctac-aaaatcagattctcctc 14946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 530 - 596
Target Start/End: Complemental strand, 15132 - 15067
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 596  Q
    |||||||||||| ||||| ||||||||| || ||||||||||||||||| |||||| ||||||||||    
T  15132 attgagagttagcctcacgcttaccttaaattgatgaacaaagctctac-aaaatcagattctcctc 15067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 594
Target Start/End: Complemental strand, 33958 - 33893
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  33958 cattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 33893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 73007 - 73091
Alignment:
Q  222 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||||| |||| | ||| |||| ||| |||| ||||||||| |||| |||||| ||||||| | |||||  ||||||||||||||    
T  73007 tgtttacaggtcctatacacaactagacatcgaaaggaacacaaaatatgcattaacaacatccattcaactcattccaacaatc 73091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 176824 - 176880
Alignment:
Q  537 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  176824 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 176880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 152129 - 152089
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  152129 tagtcccacccttaccttagattgatgaacaaagctctaca 152089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 68988 - 69079
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||| ||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  68988 tcagaagttatataatctataattattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 69079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 182078 - 182010
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||| ||||||||    
T  182078 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacagaaaatcagattctcc 182010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 172127 - 172087
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  172127 tagtcccacccttaccttagattggtgaacaaagctctaca 172087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 577
Target Start/End: Original strand, 1092 - 1143
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta 577  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  1092 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctcta 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 597
Target Start/End: Complemental strand, 705 - 634
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctcc 597  Q
    |||||||||||||||||||||||||||||| ||| || ||||||| ||||||| ||||||||||||| ||||    
T  705 atcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattcttctcc 634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 11343 - 11258
Alignment:
Q  220 aatgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaat 305  Q
    |||||||| |||| | ||| ||| ||||||||||||||||||| ||||||  ||||||||||||||||||||  ||||| ||||||    
T  11343 aatgtttacaggtcctatacacagttaggcatctaaaggaacacaaaacagacatcaacaacaacaattcagagcattcaaacaat 11258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 508 - 593
Target Start/End: Complemental strand, 11460 - 11372
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctc 593  Q
    |||||||||||||| |  | |||||||||||||||||||||||||||||||  || ||||||| || ||||| ||||||||||||||||    
T  11460 tcagaagttatataatctaaaatcattgagagttagtctcacccttaccttgaattgatgaaccaaactctaccaaaaatctgattctc 11372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 3384 - 3464
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttcattcca 300  Q
    ||||||| |||||| ||| |||| |||||||||||||||||| ||||||  ||||||||||||||||| ||| ||||||||    
T  3384 atgtttacaggttctatacacaactaggcatctaaaggaacacaaaacagccatcaacaacaacaattacagatcattcca 3464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 7873 - 7937
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  7873 attgagagttagcctcacccttacattgaattgatgaacaaagctctacaaaaatcagattctcc 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 12487 - 12551
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  12487 attgagagttagcctcacccttacattgaattgatgaacaaagctctacaaaaatcagattctcc 12551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 10482 - 10546
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  10482 attgagagttagcctcacccttacattgaattgatgaacaaagctctacaaaaatcagattctcc 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 2140 - 2203
Alignment:
Q  528 tcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  2140 tcattgagagctagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattct 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 560
Target Start/End: Original strand, 17625 - 17701
Alignment:
Q  484 gaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagat 560  Q
    ||||||||||||||||  |||||||||||| ||||| ||||   | |||||||| ||||||||||||||||||||||    
T  17625 gaacaattcatgttaagacaattttcagaaattatacattatggttattgagagatagtctcacccttaccttagat 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 21848 - 21939
Alignment:
Q  508 tcagaagttatatattaca--atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| || |  || ||||||||||||||||||||||||||| ||| || ||||||| ||||||| ||||||| |||||||||    
T  21848 tcagaagttatataatatataattattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatcttattctcctc 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 596
Target Start/End: Original strand, 34521 - 34592
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcctc 596  Q
    |||||||||||||||| ||||||||||||||||||  |||||  || ||||| |||||||||||||||||||    
T  34521 aatcattgagagttagcctcacccttaccttagattaatgaatcaaactctaccaaaaatctgattctcctc 34592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 596
Target Start/End: Complemental strand, 7497 - 7430
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||||  ||||||||||||||||    
T  7497 attgagagttagtctcacccttacctttgattgaagaacaaaactctacaggaaatctgattctcctc 7430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 30577 - 30656
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattcca 300  Q
    ||||||| |||||| |||| ||| ||||||||||||||||    ||||| ||||||||||||||||||||| ||||||||    
T  30577 atgtttacaggttctatatgcaactaggcatctaaaggaaacacaaacaggcatcaacaacaacaattcagatcattcca 30656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 30856 - 30913
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  30856 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 13609 - 13687
Alignment:
Q  478 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 557  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  13609 tttcaagaacaattcaa-ttagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 35265 - 35343
Alignment:
Q  116 ttgcagagtcgcttaagcgaccattcaaaa-ttctggagaacaaaagttacagttttcacccatttttcacccaaaactc 194  Q
    |||||| ||||||||||||||||||||||| ||||| |||| ||| ||||| | |||||||| |||||||||||||||||    
T  35265 ttgcagcgtcgcttaagcgaccattcaaaatttctgtagaa-aaatgttacgggtttcacccctttttcacccaaaactc 35343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 35359 - 35395
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggt 232  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35359 caatgcccaaacatgtttccaaagattgtttataggt 35395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 31478 - 31411
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||||   | |||||||||| |||| |||||||| ||||||||    
T  31478 atcattgagagttagtctcacccttaccttgatttgatgaacaaaactctccaaaaatcagattctcc 31411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 18168 - 18225
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||||| || ||||| ||||  || |||||||| ||||||||||||||||||||    
T  18168 tcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 17890 - 17958
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaac-ataaaacatgcatcaacaacaacaatt 288  Q
    ||||||| |||||| ||| |||||||||| |||||||||||   |||||| |||| |||||||||||||    
T  17890 atgtttacaggttctatacacaattaggcctctaaaggaacgcaaaaacaggcattaacaacaacaatt 17958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 567
Target Start/End: Original strand, 51985 - 52062
Alignment:
Q  491 tcatgttaaatcaattttcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaa 567  Q
    ||||||||||||||  | ||||||||||||| |  | ||||||||||||||||||||||||||||||||||| ||||||    
T  51985 tcatgttaaatcaaaat-cagaagttatataatctataatcattgagagttagtctcacccttaccttagattgatgaa 52062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 530 - 592
Target Start/End: Complemental strand, 643 - 582
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  643 attgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattct 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 508 - 567
Target Start/End: Original strand, 11659 - 11720
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaa 567  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||| ||||||    
T  11659 tcagaagttatataatctaaaatcattgagagttagtctcacccttaccttagattgatgaa 11720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 530 - 592
Target Start/End: Complemental strand, 25548 - 25487
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25548 attgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattct 25487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 540 - 594
Target Start/End: Complemental strand, 3694 - 3641
Alignment:
Q  540 agtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  3694 agtctcacccttaccttagatcgatgaagaaagctctac-agaatctgattctcc 3641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 592
Target Start/End: Complemental strand, 11654 - 11603
Alignment:
Q  540 agtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 592  Q
    |||||||||||||||||||||||||||| ||| |||||| | |||||||||||    
T  11654 agtctcacccttaccttagatcgatgaataaatctctac-agaatctgattct 11603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 14730 - 14664
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaa-cataaaacatgcatcaacaacaacaa 286  Q
    |||||||||||| | |||||||| |||| ||||||||||| |||||||||| |||||||||||||||    
T  14730 atgtttataggtcctatatacaactaggtatctaaaggaaacataaaacatccatcaacaacaacaa 14664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 555
Target Start/End: Complemental strand, 14452 - 14398
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 555  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  14452 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 3354 - 3419
Alignment:
Q  529 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||   | ||||||||||||||| |||||||| | ||||||    
T  3354 cattgagagttagtctcacccttaccttgatttgatgaacaaagctcttcaaaaatcagtttctcc 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 111638 - 111703
Alignment:
Q  236 atatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaatt-cagttcattcca 300  Q
    |||||||| |||||||||||||||||| ||||||  ||||||||||||||||| ||| ||||||||    
T  111638 atatacaactaggcatctaaaggaacacaaaacagccatcaacaacaacaattacagatcattcca 111703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  505 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 594
Target Start/End: Original strand, 52228 - 52292
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||| ||||||||  || |||||||||||||| ||||||||| ||||||||    
T  52228 attgagagttagcctcactcttaccttgaattgatgaacaaagctcaacaaaaatcagattctcc 52292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 596
Target Start/End: Original strand, 67704 - 67790
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 596  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||      ||| || ||||||| ||||||| |||||||||||||||||    
T  67704 tcagaagttatataatctataatcattgagagttagtctcacccttt-----gattgaagaacaaaactctacagaaaatctgattctcctc 67790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 30007 - 30054
Alignment:
Q  532 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  30007 tgagtgttagtctcacccttaccatagattgatgaacaaagctctaca 30054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 532 - 579
Target Start/End: Original strand, 35472 - 35519
Alignment:
Q  532 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  35472 tgagtgttagtctcacccttaccatagattgatgaacaaagctctaca 35519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 582
Target Start/End: Original strand, 602 - 678
Alignment:
Q  508 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttagatcgatgaa-caaagctctacaaaa 582  Q
    ||||||||||||||  ||| ||| |||||||||||||||||||||||||||| ||  ||||| |||||||||||||||    
T  602 tcagaagttatataatttataattattgagagttagtctcacccttacctta-atttatgaatcaaagctctacaaaa 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Complemental strand, 807 - 750
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  807 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 10859 - 10798
Alignment:
Q  245 taggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattccaacaatc 306  Q
    |||||||| ||||||||| |||| |||||| ||||||| |||||||  ||||||||||||||    
T  10859 taggcatcgaaaggaacacaaaatatgcattaacaacatcaattcaactcattccaacaatc 10798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 11340 - 11397
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  11340 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 11065 - 11144
Alignment:
Q  221 atgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagttcattcca 300  Q
    ||||||| |||||| |||||||| ||||||||||||||||    |||||  |||||||||||||||| ||| ||| ||||    
T  11065 atgtttacaggttccatatacaactaggcatctaaaggaaacacaaacagccatcaacaacaacaatacagatcaatcca 11144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 579
Target Start/End: Original strand, 18873 - 18922
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||| |||||||||||||| ||| ||||||||||||||||||    
T  18873 attgaaagttagcctcacccttacctttgattgatgaacaaagctctaca 18922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 594
Target Start/End: Original strand, 208 - 251
Alignment:
Q  550 ttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  208 ttaccttagatcgatgaacaaagctctac-agaatctgattctcc 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 5912 - 5856
Alignment:
Q  503 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  5912 aattttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 5856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 594
Target Start/End: Complemental strand, 10738 - 10675
Alignment:
Q  530 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 594  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  10738 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 10675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 583
Target Start/End: Original strand, 1490 - 1545
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 583  Q
    ||||||||||| ||||||||||||||||||| || || |||||||||||||| ||||    
T  1490 atcattgagagatagtctcacccttacctta-attgaagaacaaagctctaccaaaa 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 10916 - 10876
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  10916 tagtcccacccttaccttagattgatgaacaaagctctaca 10876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 557
Target Start/End: Complemental strand, 2896 - 2845
Alignment:
Q  508 tcagaagttatatatt--acaatcattgagagttagtctcacccttacctta 557  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||    
T  2896 tcagaagttatataatctaaaatcattgagagttagtctcacccttacctta 2845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 5729 - 5796
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||| | ||||| || |||||||||||||||    
T  5729 tcgcttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaaccctttttcacccaaaac 5796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 11340 - 11300
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  11340 tagtcccacccttaccttagattgatgaacaaagctctaca 11300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 579
Target Start/End: Complemental strand, 15740 - 15700
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  15740 tagtcccacccttaccttagattgatgaacaaagctctaca 15700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 70781 - 70714
Alignment:
Q  124 tcgcttaagcgaccattcaaaattctggagaacaaaagttacagttttcacccatttttcacccaaaac 192  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||| | ||||| || |||||||||||||||    
T  70781 tcgcttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaaccctttttcacccaaaac 70714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 558
Target Start/End: Original strand, 106021 - 106053
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttag 558  Q
    |||||||||||||||||||||||||||||||||    
T  106021 aatcattgagagttagtctcacccttaccttag 106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 582
Target Start/End: Original strand, 189750 - 189805
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 582  Q
    ||||||||||||| ||||||||||||||||   | ||||||||||||| |||||||    
T  189750 atcattgagagttggtctcacccttaccttgatttgatgaacaaagctatacaaaa 189805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 2193 - 2239
Alignment:
Q  52 tactgtgactgcacgcttaccagctcgcttaagcgtgcattcatcag 98  Q
    |||||||||||||||||||||||| |||||||| || || |||||||    
T  2193 tactgtgactgcacgcttaccagcacgcttaagtgtccagtcatcag 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 560
Target Start/End: Original strand, 8544 - 8578
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagat 560  Q
    |||||||||||||||| ||||||||||||||||||    
T  8544 aatcattgagagttagcctcacccttaccttagat 8578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 559
Target Start/End: Complemental strand, 13947 - 13893
Alignment:
Q  505 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 34031 - 34093
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  34031 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 34093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 579
Target Start/End: Original strand, 25185 - 25219
Alignment:
Q  545 cacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| ||||||||||||||||||    
T  25185 cacccttaccttagattgatgaacaaagctctaca 25219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 579
Target Start/End: Original strand, 36055 - 36089
Alignment:
Q  545 cacccttaccttagatcgatgaacaaagctctaca 579  Q
    |||||||||||||||| ||||||||||||||||||    
T  36055 cacccttaccttagattgatgaacaaagctctaca 36089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Complemental strand, 80781 - 80719
Alignment:
Q  526 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 588  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  80781 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 80719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Original strand, 3768 - 3801
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagat 560  Q
    ||||||||||||||| ||||||||||||||||||    
T  3768 atcattgagagttagcctcacccttaccttagat 3801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 930 - 987
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||||||||  |||| ||||  || |||||||| ||||||||||||||||||||    
T  930 tcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 8075 - 8132
Alignment:
Q  501 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 558  Q
    |||||||||||||  |||| ||||  || |||||||| ||||||||||||||||||||    
T  8075 tcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 3457 - 3401
Alignment:
Q  503 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 559  Q
    ||||||||||| |||||||||| | ||||||| || || | ||||||||||||||||    
T  3457 aattttcagaaattatatattaaattcattgaaagataatatcacccttaccttaga 3401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 1273 - 1233
Alignment:
Q  196 caatgcccaaacatgtttccaaagaatgtttataggttcaa 236  Q
    ||||||||||| ||||||||||||| ||| |||||||||||    
T  1273 caatgcccaaatatgtttccaaagattgtatataggttcaa 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 557
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  508 tcagaagttatata--ttacaatcattgagagttagtctcacccttacctta 557  Q
    |||||| |||||||  ||| ||| ||||||||||||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 209894 - 209934
Alignment:
Q  539 tagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||| ||||||||||||| || ||||||||||||||||||    
T  209894 tagtcccacccttaccttacattgatgaacaaagctctaca 209934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 527 - 579
Target Start/End: Complemental strand, 20831 - 20779
Alignment:
Q  527 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 579  Q
    ||||||||||||||  |||||||||||||||||| || | ||||| |||||||    
T  20831 atcattgagagttaacctcacccttaccttagattgaaggacaaaactctaca 20779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University