View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15232_high_8 (Length: 375)
Name: NF15232_high_8
Description: NF15232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15232_high_8 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 17 - 364
Target Start/End: Original strand, 31073450 - 31073798
Alignment:
| Q |
17 |
tataattctgcacgtacatttcctgcgaacatatacgcagataatgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaat |
116 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31073450 |
tataattttgcacgtacatttcctgcaaacatatacgcagataatgttaggaaatataagggctgaagaagaaaaataagcgcaatcactacacaagaat |
31073549 |
T |
|
| Q |
117 |
gtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagat |
216 |
Q |
| |
|
|||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| | |||||| |
|
|
| T |
31073550 |
gtaatgtgaaaacttcaaaatcagagaaaaaacaacgatcgttgtctaaaccgacaaccagagagttattactatgtgaatttttttgcaatgcatagac |
31073649 |
T |
|
| Q |
217 |
ttctctcactctca-cctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgt |
315 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||| || |
|
|
| T |
31073650 |
ttctctcactctcaccctaatgccccagtataaccacaccctcacaaaacaaatatttaaactaagttagatataagtttaaaatgctactgactgttgc |
31073749 |
T |
|
| Q |
316 |
agttaaatatttaaagaacctaggttcaatatatatcattgatcttccc |
364 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31073750 |
agttaaatatttaaagaacctaggttcaatatatagcattgatcttccc |
31073798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 372
Target Start/End: Complemental strand, 20594922 - 20594616
Alignment:
| Q |
68 |
aaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaac |
167 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||||| |||||||||| ||| ||| ||||||||||||| ||||||||| || | |||||||||||| |
|
|
| T |
20594922 |
aaataaaagggctgaagaagaaaaataaacacaatcacaacacaagaatataacgtgaaaactccaaaatcaaagaaaaaactacaaccgttgtctaaac |
20594823 |
T |
|
| Q |
168 |
cgacaactagaga---gttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccacaccctcacaaa |
263 |
Q |
| |
|
|| |||| || | |||||| ||||||||| ||| || ||||| |||||||| ||||| || ||| |||||| | |||||||| |||||||| |
|
|
| T |
20594822 |
cggcaaccaggaatttattattattatgtgaaaaaatttacaacacataaccttctctcattctcaccccaatcctccagtacaaccacactctcacaaa |
20594723 |
T |
|
| Q |
264 |
acaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttcc |
363 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| ||||||| |||| | || | |||| | |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
20594722 |
acaaatatttaaactatgtcagatataagcttagagtgttattgaccggtgcatctaaaaa--taaagaacctaggttcaatatatagtcttggtcttcc |
20594625 |
T |
|
| Q |
364 |
ctttgcttc |
372 |
Q |
| |
|
| ||||||| |
|
|
| T |
20594624 |
ccttgcttc |
20594616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 4660117 - 4660230
Alignment:
| Q |
256 |
ctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcatt |
355 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||| || |||| | || | | ||| | |||||| |||||||||||||||| |||| |
|
|
| T |
4660117 |
ctcacaaaccaaatatttaaactaagtcagatataatcttaaagtgctactgaccggtgca-tcaaaaa--caaagaaactaggttcaatatatagcatt |
4660213 |
T |
|
| Q |
356 |
gatcttccctttgcttc |
372 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
4660214 |
ggtcttccccttgcttc |
4660230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 33300900 - 33300953
Alignment:
| Q |
108 |
cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgt |
161 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
33300900 |
cacaagaatataatgtggaaactccacaatcgaagaaaaaaccacgaccgttgt |
33300953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 33300954 - 33301036
Alignment:
| Q |
83 |
agaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
165 |
Q |
| |
|
||||||||||||| | |||||| |||||||||| ||| ||| ||||| |||||||||| |||||| |||| |||||||||| |
|
|
| T |
33300954 |
agaagaaaaataaacacaatcacaacacaagaatataacgtgaaaactttaaaatcggaggaaaaactacgaccgttgtctaa |
33301036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 7371873 - 7371830
Alignment:
| Q |
122 |
gtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
165 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| |||||||| |
|
|
| T |
7371873 |
gtggaaactctaaaaccggagaaaaaaccacgatcattgtctaa |
7371830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 55 - 309
Target Start/End: Complemental strand, 32342397 - 32342143
Alignment:
| Q |
55 |
agataatgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacga |
154 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||| | ||||| ||||||||||| ||| |||||||||||||||| |||| ||||||||| | |
|
|
| T |
32342397 |
agataatgttaggaaataacatagctgaagaagaaaaataaacataatcactacacaagaatataacgtggaaactccaaaattggag-aaaaaccacta |
32342299 |
T |
|
| Q |
155 |
tcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccaca |
253 |
Q |
| |
|
|||||||||||||| ||||| | ||| ||||||||||||||| | |||| || ||||| | |||||||||||||| || ||||| |||| | ||||||| |
|
|
| T |
32342298 |
tcgttgtctaaaccaacaaccatagaattattactatgtgaatttttttacaacacataaacttctctcactctcacccgaatgccccagtacaaccaca |
32342199 |
T |
|
| Q |
254 |
ccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgac |
309 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
32342198 |
ctctcacaaaacaaatatttaaactaagtcagatataagcttaaagtgttactgac |
32342143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 61 - 310
Target Start/End: Original strand, 14766217 - 14766468
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgt |
158 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| | |||||| | ||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
14766217 |
tgttaggaaataacagggctgaagaagaaaaaataaacacaatcacaaacacaagaatataacgtggaaactccaaaatcggagaaaaaaccacgaccgt |
14766316 |
T |
|
| Q |
159 |
tgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctc |
258 |
Q |
| |
|
|||||||||||||||| ||||| |||| | | ||||||| |||| || ||||||| ||||||||||| |||| ||||| ||| | | |||||| ||| |
|
|
| T |
14766317 |
tgtctaaaccgacaaccagagaattatcattttgtgaaaaattttacaacacatagacttctctcactcacacccaatgccccaatacagccacactctc |
14766416 |
T |
|
| Q |
259 |
acaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgact |
310 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| |||||||| || ||||| |
|
|
| T |
14766417 |
acaatgcaaatatttaaactaagtcagatacaagcttaaagtgctattgact |
14766468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 71 - 311
Target Start/End: Original strand, 21118247 - 21118493
Alignment:
| Q |
71 |
taacagggctgaagaagaaaaataag--cgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaacc |
168 |
Q |
| |
|
||||| ||||||||||||||||||| | |||||| ||||||||||| ||| |||||||||||||||||| |||||||||||| | ||||||||||| | |
|
|
| T |
21118247 |
taacaaggctgaagaagaaaaataaaaacacaatcactacacaagaatataacgtggaaactccaaaatcgaagaaaaaaccacaaccgttgtctaaatc |
21118346 |
T |
|
| Q |
169 |
gacaactagagagttattactatgtgaaatgttttgcagtacatag---atttctctcactctca-cctaatgctccaggataaccacaccctcacaaaa |
264 |
Q |
| |
|
|||||| | ||| |||||||||||||||| |||| || |||||| | |||| | ||||||| || ||||| |||| | | ||||| ||||||||| |
|
|
| T |
21118347 |
gacaaccaaagaattattactatgtgaaaatttttacaacacatagagtacttctttaactctcaccccaatgccccagtacacacacactctcacaaaa |
21118446 |
T |
|
| Q |
265 |
caaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
21118447 |
ctaatatttaaactaagtcagatataagcttaaagtgctattgactg |
21118493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 20727755 - 20727624
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
||||| |||||||||| ||||||||| |||||||| | ||||| |||||||||| |||||||||||||| |||||| ||||||||||||||| ||| |
|
|
| T |
20727755 |
tgttaggaaataacagagctgaagaaaaaaaataaac--aatcacaacacaagaatataatgtggaaactctaaaatcagagaaaaaaccacga---ttg |
20727661 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtgaaa |
197 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
20727660 |
tctaaaccgacaatcagagaattattactatgtgaaa |
20727624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 14763667 - 14763799
Alignment:
| Q |
67 |
gaaataacagggctgaagaagaaaaa-taagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtcta |
164 |
Q |
| |
|
||||||||||||||||| |||||||| ||| | |||||| | ||||| ||| ||| |||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
14763667 |
gaaataacagggctgaaaaagaaaaaataaacacaatcacaaacacaaaaatataacatggaaactccaaaaccgaagaaaaaaccacgactgttgtcta |
14763766 |
T |
|
| Q |
165 |
aaccgacaactagagagttattactatgtgaaa |
197 |
Q |
| |
|
|||||||||| ||||| |||| ||||||||||| |
|
|
| T |
14763767 |
aaccgacaaccagagaattataactatgtgaaa |
14763799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 21118714 - 21118775
Alignment:
| Q |
250 |
cacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
21118714 |
cacactctcacaaaactaatatttaaactaagtcagatataagcttaaagtgctactgactg |
21118775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 14763830 - 14763892
Alignment:
| Q |
249 |
ccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||| ||| |||||||| || |||||| |
|
|
| T |
14763830 |
ccacactctcacaaagcaaatatttaaactaagtcagatacaagcttaaagtgctactgactg |
14763892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 61 - 311
Target Start/End: Complemental strand, 6138503 - 6138253
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| | |||||| |||||||||| ||| ||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
6138503 |
tgttaggaaataacagggctgaagaagaaaaatatacacaatcacaacacaagaatataacgtggaaactccaaaactagagaaaaaaccacgaccgttg |
6138404 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctcac |
260 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| | || || ||||||| |||||| ||||||||| ||||| ||| | | |||||| ||||| |
|
|
| T |
6138403 |
tctaaaccgacaaccagagaattattactatgtgaaaattgttacaccacatagacttctctaactctcacccaatgccccaatacacccacactctcac |
6138304 |
T |
|
| Q |
261 |
aaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
6138303 |
aaagcaaatatttaaactaagtcagatataagcttaaagtgctactgactg |
6138253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 61 - 364
Target Start/End: Complemental strand, 52022435 - 52022131
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||| |||||| ||||||| || ||| ||||||||||||||| || || |||||||| || | ||| |
|
|
| T |
52022435 |
tgttaggaaataatagggttgaagaagaaaaataagcacaatcacaacacaaggatataacgtggaaactccaaaaccgaag-aaaaaccatgaccattg |
52022337 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctc--ca-ggataaccacaccc |
256 |
Q |
| |
|
|||||||||||||| ||| | |||||| |||||||||| |||| || ||||||| |||||||||||||| || ||||| | || | | |||||||| | |
|
|
| T |
52022336 |
tctaaaccgacaaccagaaaattattattatgtgaaatcttttacaacacatagacttctctcactctcatcccaatgcccggcacgcacaaccacactc |
52022237 |
T |
|
| Q |
257 |
tcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattg |
356 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||| || |||||| || | |||| | |||||| |||||||||||||||| | ||| |
|
|
| T |
52022236 |
tcacaaaacaaatatttaaactaagtcagatatgagcttaaagtgctaatgactggtgcatctaaaaa--caaagaaactaggttcaatatatagccttg |
52022139 |
T |
|
| Q |
357 |
atcttccc |
364 |
Q |
| |
|
||||||| |
|
|
| T |
52022138 |
gtcttccc |
52022131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 107 - 309
Target Start/End: Complemental strand, 6140078 - 6139876
Alignment:
| Q |
107 |
acacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgca |
206 |
Q |
| |
|
|||||||||| ||| ||| ||||||||||||| ||||||||| ||||| | |||||||| ||||||||| ||| |||||||||||||||| | || || |
|
|
| T |
6140078 |
acacaagaatataacgtgaaaactccaaaatcagagaaaaaattacgattgctgtctaaatcgacaactaaagaattattactatgtgaaaattgttaca |
6139979 |
T |
|
| Q |
207 |
gtacatagatttctctcactctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagt |
306 |
Q |
| |
|
|||||||| |||||| |||||||||||||| |||| | | |||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||| | |
|
|
| T |
6139978 |
atacatagacttctctaactctcacctaatgtcccagtacacccacactctcacaaagcaaatatttaaactaagttagatataagcttaaagtgttatt |
6139879 |
T |
|
| Q |
307 |
gac |
309 |
Q |
| |
|
||| |
|
|
| T |
6139878 |
gac |
6139876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 3742465 - 3742596
Alignment:
| Q |
67 |
gaaataacagggctgaagaag-aaaaataagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtcta |
164 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||| | ||||||||| ||| ||| |||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
3742465 |
gaaataacagggctgaagaaggaaaaataaacacaatcacaaacacaagaatataacgtgaaaactcaaaaatcagagaaaaaaccacgaccgttgtcta |
3742564 |
T |
|
| Q |
165 |
aaccgacaactagagagttattactatgtgaaa |
197 |
Q |
| |
|
|||| ||||| | ||| |||||||||||||||| |
|
|
| T |
3742565 |
aacc-acaaccaaagaattattactatgtgaaa |
3742596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 301
Target Start/End: Original strand, 43635671 - 43635798
Alignment:
| Q |
172 |
aactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctcacaaaacaaatat |
271 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| || ||||| |||||||||||||||||||||| ||| | |||||||| |||||||| ||||||| |
|
|
| T |
43635671 |
aactagagaattattactatgtgaaattttttacaacgtatagacttctctcactctcacctaatgccccaatacaaccacactctcacaaatcaaatat |
43635770 |
T |
|
| Q |
272 |
ttaaactaagtcagatataagtttaaagtg |
301 |
Q |
| |
|
|| | ||||||||||||||||||||||| |
|
|
| T |
43635771 |
tt--atcaagtcagatataagtttaaagtg |
43635798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 292
Target Start/End: Original strand, 2595238 - 2595348
Alignment:
| Q |
183 |
tattactatgtgaaatgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatatttaaactaag |
281 |
Q |
| |
|
|||||||||||||| | |||| || ||||||| |||| |||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||||| |
|
|
| T |
2595238 |
tattactatgtgaatttttttacaacacatagacttctatcactctcaccttaatgctccaatacaaccacattcttacaaaacaaatatttaaactaag |
2595337 |
T |
|
| Q |
282 |
tcagatataag |
292 |
Q |
| |
|
||| ||||||| |
|
|
| T |
2595338 |
tcacatataag |
2595348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 304
Target Start/End: Complemental strand, 5397631 - 5397404
Alignment:
| Q |
66 |
agaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
165 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||| |||||||||| ||| || |||||||||| | |||||||||||||| |||| |
|
|
| T |
5397631 |
agaaataacaaagctgaagaagaaaaataagcaaaatcacaacacaagaatataaagtaagaactccaaaactgaagaaaaaaccacgaccgtt------ |
5397538 |
T |
|
| Q |
166 |
accgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcac--ctaatgctccaggataaccacaccctcacaaa |
263 |
Q |
| |
|
||||||||||| |||||| |||||| | |||| || ||||||| ||||||||||||||| | |||| || | |||||||| |||||||| |
|
|
| T |
5397537 |
----acaactagagaattatta---tgtgaatttttttacaacacatagacttctctcactctcacgcccaatgtcccggtgcaaccacactctcacaaa |
5397445 |
T |
|
| Q |
264 |
acaaatatttaaactaagtcagatataagtttaaagtgtta |
304 |
Q |
| |
|
| ||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
5397444 |
ataaatatttaaattaagttagatataagcttaaagtgtta |
5397404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 43835077 - 43835010
Alignment:
| Q |
247 |
aaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatg |
314 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||| |
|
|
| T |
43835077 |
aaccacactatcacaaaacaaatatttaaaccaagtcagatgtaagtttaaagtgctactgactgatg |
43835010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 61 - 372
Target Start/End: Complemental strand, 3371720 - 3371405
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
3371720 |
tgttatgaaataatagggctgaagaagaaaaataatcgcaatcactacacaagaatataacgaggaaactccaaaaccggagaaaaaaccactatcgttg |
3371621 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtgaa-atgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctc |
258 |
Q |
| |
|
||| |||||||||| ||||| ||||||||||||||| | |||| | ||||||| |||| |||||| ||||| |||| |||||| |||||||| ||| |
|
|
| T |
3371620 |
tcttaaccgacaaccagagaattattactatgtgaattttttttaccacacatagacttctttcactcccacctcaatgtcccaggacaaccacactctc |
3371521 |
T |
|
| Q |
259 |
acaaaacaaatatttaaactaagtcagat----ataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcat |
354 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||||||||||||| || ||||||||| | |||| | || ||||||||||| |||||||| | | |
|
|
| T |
3371520 |
acaaagcaaatatttaaattaagtcagatataaataagtttaaagttctattgactgatgcatctaaaaa--caaggaacctaggtttaatatatagcct |
3371423 |
T |
|
| Q |
355 |
tgatcttccctttgcttc |
372 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
3371422 |
tggtcttccctttgcttc |
3371405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 372
Target Start/End: Original strand, 17730878 - 17731189
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggag-aaaaaaccacgatcgtt |
159 |
Q |
| |
|
||||| |||||||||||| |||||||| ||||||| | |||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
17730878 |
tgttaggaaataacagggttgaagaagcaaaataaacacaatcacaacacaagaatataacgtggaaactccaaaaccggaggaaaaaaccacgaccgtt |
17730977 |
T |
|
| Q |
160 |
gtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca--cctaatgctccaggataaccacaccct |
257 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| |||| | ||||||| |||||||||||||| || ||||| |||| | | ||||| | |
|
|
| T |
17730978 |
gtctaaaccgacaaccagagaattattactatgtgaaattttttagaacacatagacttctctcactctcacccccaatgc-ccagtacactcacactgt |
17731076 |
T |
|
| Q |
258 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
357 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| || |||||| || | ||| | ||||||| |||||||||||||||| | ||| |
|
|
| T |
17731077 |
cacaaagaaaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaacaa--taaagaaactaggttcaatatatagccttgg |
17731174 |
T |
|
| Q |
358 |
tcttccctttgcttc |
372 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
17731175 |
ccttccccttgcttc |
17731189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 372
Target Start/End: Original strand, 19032109 - 19032420
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggag-aaaaaaccacgatcgtt |
159 |
Q |
| |
|
||||| |||||||||||| |||||||| ||||||| | |||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
19032109 |
tgttaggaaataacagggttgaagaagcaaaataaacacaatcacaacacaagaatataacgtggaaactccaaaaccggaggaaaaaaccacgaccgtt |
19032208 |
T |
|
| Q |
160 |
gtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca--cctaatgctccaggataaccacaccct |
257 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| |||| | ||||||| |||||||||||||| || ||||| |||| | | ||||| | |
|
|
| T |
19032209 |
gtctaaaccgacaaccagagaattattactatgtgaaattttttagaacacatagacttctctcactctcacccccaatgc-ccagtacactcacactgt |
19032307 |
T |
|
| Q |
258 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
357 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| || |||||| || | ||| | ||||||| |||||||||||||||| | ||| |
|
|
| T |
19032308 |
cacaaagaaaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaacaa--taaagaaactaggttcaatatatagccttgg |
19032405 |
T |
|
| Q |
358 |
tcttccctttgcttc |
372 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
19032406 |
ccttccccttgcttc |
19032420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 77 - 296
Target Start/End: Complemental strand, 3372592 - 3372372
Alignment:
| Q |
77 |
ggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacaacta |
176 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| | ||||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
3372592 |
ggctgaagaagaaaaataagcacaaccattacacaaaaatataacgtgtaaattttaaaatcg-agagaaaaccacgatcgttgtctaaaccgacaatca |
3372494 |
T |
|
| Q |
177 |
gagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca--cctaatgctccaggataaccacaccctcacaaaacaaatattta |
274 |
Q |
| |
|
|||| ||||||||||||||||| |||| | | ||| | |||||||||||| | || ||||| ||| | |||||||| | |||||| |||||||||| |
|
|
| T |
3372493 |
gagaattattactatgtgaaattttttataacatataaacttctctcactcttatccccaatgccgcagtacaaccacactcacacaaagcaaatattta |
3372394 |
T |
|
| Q |
275 |
aactaagtcagatataagttta |
296 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
3372393 |
aactaagtcagatatatgttta |
3372372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 43979526 - 43979392
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||| | |||| | ||||||||||| ||| ||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
43979526 |
tgttaggaaataacatggctgaagaagaaaaataaacacaataactacacaagaatataacgtggaaactccaaaactggagaaaaaaccacgaccgtta |
43979427 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtga |
195 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |
|
|
| T |
43979426 |
tctaaaccgacaaccagagaattattactatgtga |
43979392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 40195792 - 40195669
Alignment:
| Q |
109 |
acaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagt |
208 |
Q |
| |
|
|||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||| || |
|
|
| T |
40195792 |
acaagaatataacgtggaaattccaaaaccagagaaaaaaccacgatcgttgtctaaaccgacaaccagagaattattactatgtaaaattttttacaac |
40195693 |
T |
|
| Q |
209 |
acatagatttctctcactctcacc |
232 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
40195692 |
gcatagatttctctcactctcacc |
40195669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 67 - 292
Target Start/End: Complemental strand, 1027101 - 1026874
Alignment:
| Q |
67 |
gaaataacagggctgaagaagaaaaa-taagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
165 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| | |||||| || ||| |||| ||| ||| ||||||||||| | ||||||||||||||| || ||||||| |
|
|
| T |
1027101 |
gaaataacagggttgaagaagaaaaaataaacacaatcactatacaggaatataacgtgtaaactccaaaaccagagaaaaaaccacgaccgctgtctaa |
1027002 |
T |
|
| Q |
166 |
accgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccacaccctcacaaaa |
264 |
Q |
| |
|
||||||||| |||||||||||| || || ||| |||| || ||||| | |||| ||||| || || ||||| |||| | |||||||| |||| ||| |
|
|
| T |
1027001 |
accgacaaccagagagttattagtacgtaaaaaattttacaacacataaacttctgtcacttgcaccccaatgccccagtacaaccacactctcagaaag |
1026902 |
T |
|
| Q |
265 |
caaatatttaaactaagtcagatataag |
292 |
Q |
| |
|
|||||||||||| ||| |||||||||| |
|
|
| T |
1026901 |
aaaatatttaaacaaagacagatataag |
1026874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 21344529 - 21344682
Alignment:
| Q |
80 |
tgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaac-cacgatcgttgtctaaaccgacaactaga |
178 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| ||| ||| |||||| ||||| |||||||| ||||| | ||||||||||| ||||| ||| |
|
|
| T |
21344529 |
tgaagaagaaaaataagcacaatcacaacacaagaatataacgtgaaaactctaaaatgaaggaaaaaacacacgaccattgtctaaaccaacaaccaga |
21344628 |
T |
|
| Q |
179 |
gagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacc |
232 |
Q |
| |
|
| |||||| |||||||||| |||| || ||||| | ||||||| |||||||| |
|
|
| T |
21344629 |
taattattagtatgtgaaatcttttacaacacataaacttctctctctctcacc |
21344682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 38183107 - 38183169
Alignment:
| Q |
249 |
ccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||||| |||||||| || |||||| |
|
|
| T |
38183107 |
ccacactctcacaaagcaaatatttaacctaagtcagatataagcttaaagtgctactgactg |
38183169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 49582716 - 49582679
Alignment:
| Q |
257 |
tcacaaaacaaatatttaaactaagtcagatataagtt |
294 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
49582716 |
tcacaaagcaaatatttaaactaagttagatataagtt |
49582679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 111; Significance: 6e-56; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 61 - 372
Target Start/End: Original strand, 5448673 - 5448984
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcattac-acaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgt |
158 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| ||| | |||||| | |||||||| ||||||||||||||||||| || ||||||||||| || ||| |
|
|
| T |
5448673 |
tgttaggaaataacagggttgaagaagaaaaaataaacacaatcacaaatacaagaatataatgtggaaactccaaaaccgtagaaaaaaccatgaccgt |
5448772 |
T |
|
| Q |
159 |
tgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctc |
258 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||| |||| || ||||||| |||| ||||||||||| ||||| |||| | | |||||| ||| |
|
|
| T |
5448773 |
tgtctaaaccgacaaccagagaattatcactatgtgaaattttttacaacacatagacttctatcactctcacccaatgccccagtacacccacactctc |
5448872 |
T |
|
| Q |
259 |
acaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgat |
358 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||||||| || |||||| || | |||| | |||||| |||||||||||||||| ||||| | |
|
|
| T |
5448873 |
acaaagaaaatatttaaactaagttagatataagcttaaagtgctactgactggtgcatctaaaaa--caaagaaactaggttcaatatatagcattggt |
5448970 |
T |
|
| Q |
359 |
cttccctttgcttc |
372 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
5448971 |
attccccttgcttc |
5448984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 61 - 372
Target Start/End: Original strand, 5439663 - 5439974
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcattac-acaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgt |
158 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| ||| | |||||| | |||||||| ||| ||||||||||||||| || ||||||||||| || ||| |
|
|
| T |
5439663 |
tgttaggaaataacagggttgaagaagaaaaaataaacacaatcacaaatacaagaatataacgtggaaactccaaaaccgtagaaaaaaccatgaccgt |
5439762 |
T |
|
| Q |
159 |
tgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctc |
258 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||| |||| || ||||||| |||| ||||||||||| ||||| |||| | | |||||| ||| |
|
|
| T |
5439763 |
tgtctaaaccgacaaccagagaattatcactatgtgaaattttttacaacacatagacttctatcactctcacccaatgccccagtacatccacactctc |
5439862 |
T |
|
| Q |
259 |
acaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgat |
358 |
Q |
| |
|
||||| ||||||||||||| ||| ||||||||| |||||||| || |||||| || | |||| | ||| || |||||||||||||||| ||||| | |
|
|
| T |
5439863 |
acaaagaaaatatttaaactgagttagatataagcttaaagtgctactgactggtgcatctaaaaa--caaataaactaggttcaatatatagcattggt |
5439960 |
T |
|
| Q |
359 |
cttccctttgcttc |
372 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
5439961 |
attccccttgcttc |
5439974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 311
Target Start/End: Original strand, 5447676 - 5447932
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaa---taagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatc |
156 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| | |||||| | ||||||||| |||||||||||||| |||| |||||||||||| || | | |
|
|
| T |
5447676 |
tgttaggaaataacagggctgaagaagaaaaaaaataaacacaatcacaaacacaagaatataatgtggaaactctaaaaccggagaaaaaactactacc |
5447775 |
T |
|
| Q |
157 |
gttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct--aatgctccaggataaccacac |
254 |
Q |
| |
|
||||||||||||||||| ||||| |||| |||||||||| | |||| || ||||||| |||||||||||||||| || || |||| | | |||||| |
|
|
| T |
5447776 |
attgtctaaaccgacaaccagagaattatcactatgtgaatttttttacaacacatagacttctctcactctcaccccaaacgccccagtacacccacac |
5447875 |
T |
|
| Q |
255 |
cctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| |
|
|
| T |
5447876 |
tctcacaaaacaaatatttaaactaagttatatataagcttaaagtgctattgactg |
5447932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 372
Target Start/End: Original strand, 15589605 - 15589911
Alignment:
| Q |
67 |
gaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaa |
166 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||||||| ||||||||| ||| |||||||||||||| || ||||||| ||| || |||| |||||| |
|
|
| T |
15589605 |
gaaataacatggctaaagaagaaaaataagcacaatcattgcacaagaatataacttggaaactccaaaaccgaagaaaaacccatgaccgttttctaaa |
15589704 |
T |
|
| Q |
167 |
ccgacaactagagagttattactatgtgaaatgttttgc--agtacatagatttctctcactctcac-ctaatgctccaggataaccacaccctcacaaa |
263 |
Q |
| |
|
|||||||| ||||| || |||||||||||||| |||| | | |||| || ||||||||||||||| | ||| | |||| | ||||| || | |||| |
|
|
| T |
15589705 |
ccgacaaccagagaattgttactatgtgaaattttttacataacacatggaattctctcactctcacgccaattccccagtacaaccatactgacccaaa |
15589804 |
T |
|
| Q |
264 |
acaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttcc |
363 |
Q |
| |
|
|||||||| || |||||| ||||||||| |||| ||| || |||| || | |||||| ||||||||||| ||||||||||| | ||| |||||| |
|
|
| T |
15589805 |
gcaaatattgaacctaagtaagatataagcttaatgtgctactgacctgtgcatctaaata--caaagaacctagattcaatatatagccttggtcttcc |
15589902 |
T |
|
| Q |
364 |
ctttgcttc |
372 |
Q |
| |
|
| ||||||| |
|
|
| T |
15589903 |
ccttgcttc |
15589911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 311
Target Start/End: Original strand, 5438750 - 5438922
Alignment:
| Q |
141 |
agaaaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct--aatgc |
238 |
Q |
| |
|
||||||||| || | | ||||||||||||||||| ||||| |||| ||||| |||| | |||| || ||||||| |||||||||||||||| || || |
|
|
| T |
5438750 |
agaaaaaactactaccattgtctaaaccgacaaccagagaattatcactatctgaatttttttacaacacatagacttctctcactctcaccccaaacgc |
5438849 |
T |
|
| Q |
239 |
tccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
|||| | | |||||| ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| |
|
|
| T |
5438850 |
cccagtacacccacactctcacaaaacaaatatttaaactaagttatatataagcttaaagtgctattgactg |
5438922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 15588584 - 15588704
Alignment:
| Q |
176 |
agagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatattta |
274 |
Q |
| |
|
||||| ||||||||||| |||| |||| || ||||||| |||||||||||| ||| ||||| |||| | ||||| || ||||||||||||||||||| |
|
|
| T |
15588584 |
agagaattattactatg--aaattttttacaacacatagacttctctcactcttaccccaatgccccagtacaaccaaactctcacaaaacaaatattta |
15588681 |
T |
|
| Q |
275 |
aactaagtcagatataagtttaa |
297 |
Q |
| |
|
|||||||||| ||||||| |||| |
|
|
| T |
15588682 |
aactaagtcaaatataagcttaa |
15588704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 1813520 - 1813653
Alignment:
| Q |
68 |
aaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactcca---aaatcggagaaaaaaccacgatcgttgtcta |
164 |
Q |
| |
|
||||||||| |||||| ||||||||||| | |||||| |||||| ||| ||||||||||| || | |||| | || ||| |||| || ||||||| |
|
|
| T |
1813520 |
aaataacagagctgaaaaagaaaaataaacacaatcacaacacaaaaatataatgtggaaattctaaataaataaaaaaacaaatcacgttcattgtcta |
1813619 |
T |
|
| Q |
165 |
aaccgacaactagagagttattactatgtgaaat |
198 |
Q |
| |
|
|||||||||||||| |||||| |||||||||| |
|
|
| T |
1813620 |
aaccgacaactagatcattattagtatgtgaaat |
1813653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 25078455 - 25078408
Alignment:
| Q |
118 |
taatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
165 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
25078455 |
taatgtggaaactccaaagcaggagaaaaaaccacgatagttgtctaa |
25078408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 15588508 - 15588578
Alignment:
| Q |
58 |
taatgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaa |
128 |
Q |
| |
|
|||||||| ||||||| |||||| || |||||||||||| |||||| |||||||||| ||| ||||||| |
|
|
| T |
15588508 |
taatgttaggaaataagagggctaaaatagaaaaataagcacaatcacaacacaagaatataacgtggaaa |
15588578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 61 - 301
Target Start/End: Original strand, 7284417 - 7284658
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||| |||||||||| ||| ||||||||| |||||| |||||||||| || |||||||| |
|
|
| T |
7284417 |
tgttaagaaataacagagctgaagaagaaaaataagcataatcataacacaagaatataacgtggaaacttcaaaattggagaaaaaatcatgatcgttg |
7284516 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccacaccctca |
259 |
Q |
| |
|
|||||||||||||| | ||| |||||||||||| | | |||| || ||||||| |||||||| ||||| || ||||| ||| | | | ||| |||| |
|
|
| T |
7284517 |
tctaaaccgacaaccaaagaattattactatgtaattttttttacaacacatagacttctctcattctcaccccaatgccccactacagcatcactctca |
7284616 |
T |
|
| Q |
260 |
caaaacaaatatttaaactaagtcagatataagtttaaagtg |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7284617 |
caaaacaaatatttaaactaagtcagatataagtttaaagtg |
7284658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 311
Target Start/End: Original strand, 7277926 - 7278116
Alignment:
| Q |
122 |
gtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctc |
221 |
Q |
| |
|
||||||||| |||| ||| |||||||||||| ||||||||||||||||||| ||| | | ||||||||| || | |||| || ||||||| ||||| |
|
|
| T |
7277926 |
gtggaaactttaaaactggataaaaaaccacgaccgttgtctaaaccgacaaccagaaaatgattactatgggattttttttacaacacatagacttctc |
7278025 |
T |
|
| Q |
222 |
tcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
||||||||||| |||||||||| | || || || |||||||| |||||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
7278026 |
tcactctcaccccaatgctccagtacaatcatactctcacaaagcaaatatttaaactaagtcagatataagcttaaagtgctactgactg |
7278116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 372
Target Start/End: Original strand, 392240 - 392431
Alignment:
| Q |
182 |
ttattactatgtgaaatgttttgcagtacatagatttctctcactctcac---ctaatgctccaggataaccacaccctcacaaaacaaatatttaaact |
278 |
Q |
| |
|
|||| |||||||||||| |||| || ||||||| ||||||| | ||||| | ||||| ||| | |||||||| |||||||| |||||||||||||| |
|
|
| T |
392240 |
ttatcactatgtgaaattttttacaacacatagaattctctctcactcacaacccaatgccccaatacaaccacactctcacaaagcaaatatttaaact |
392339 |
T |
|
| Q |
279 |
aagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccctttgcttc |
372 |
Q |
| |
|
|||||||||||||| |||||||| || | ||||||||| |||| | |||||| ||| |||||||||||| | ||| ||||||| ||||||| |
|
|
| T |
392340 |
aagtcagatataagcttaaagtgctactaactgatgtatctaaaaa--caaagaaactacgttcaatatatagccttggtcttccccttgcttc |
392431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 281
Target Start/End: Complemental strand, 3581699 - 3581496
Alignment:
| Q |
80 |
tgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggag-aaaaaaccacgatcgttgtctaaaccgacaactaga |
178 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| ||||||| || |||||| |||||| |||| |||||||||||||||| ||||||||||||||| | | |
|
|
| T |
3581699 |
tgaagaagaaaaataagcacaatctcaacacaataatgtaacgtagaaacttcaaaattggagaaaaaaaccacgatcgtcgtctaaaccgacaaccaaa |
3581600 |
T |
|
| Q |
179 |
gagttattactatgtgaaatgttttgcagtacatagatttctctcactc-tcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaac |
277 |
Q |
| |
|
|| || ||| |||||||| |||| || ||||||| || |||||||| | || ||||| || | |||||||| |||||||| |||||||||||| |
|
|
| T |
3581599 |
gaattgttattatgtgaagatttttacaacacatagacttatctcactcaccccccaatgccccgatacaaccacactctcacaaagaaaatatttaaac |
3581500 |
T |
|
| Q |
278 |
taag |
281 |
Q |
| |
|
|||| |
|
|
| T |
3581499 |
taag |
3581496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 372
Target Start/End: Complemental strand, 41341346 - 41341037
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
160 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||| | |||||| |||||||||| ||| |||||||||||||| | ||| |||||||| || ||||| |
|
|
| T |
41341346 |
tgttaggaaataatagggctgaagaagaaaaataaacacaatcacaacacaagaatataacatggaaactccaaaaccagaggaaaaaccatgaccgttg |
41341247 |
T |
|
| Q |
161 |
tctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctcac |
260 |
Q |
| |
|
|||||||||||||| | ||| |||||||||||||||| | || || ||||||| |||||| | ||||||| ||||| |||| | | |||||| ||||| |
|
|
| T |
41341246 |
tctaaaccgacaaccaaagaattattactatgtgaaaattgttacaacacatagacttctctaattctcacccaatgccccagtacacccacactctcac |
41341147 |
T |
|
| Q |
261 |
aaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatct |
360 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| |||||||| || |||||| || | |||| | |||||| ||||||| |||||||| | ||| ||| |
|
|
| T |
41341146 |
aaagcaaacatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaaaaa--caaagaaactaggtttaatatataactttggtct |
41341049 |
T |
|
| Q |
361 |
tccctttgcttc |
372 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
41341048 |
tccccttgcttc |
41341037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 107 - 311
Target Start/End: Original strand, 35429765 - 35429969
Alignment:
| Q |
107 |
acacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgca |
206 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| ||| ||||||||||| |||| |||||||||||||| ||||| |||||||||| ||||| | || || |
|
|
| T |
35429765 |
acacaagaatataacgtggaaactccaaaactagaggaaaaaccacgaccgttatctaaaccgacaaccagagaattattactatttgaaaattattaca |
35429864 |
T |
|
| Q |
207 |
gtacatagatttctctcactctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagt |
306 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| | | |||||| |||||||| |||||||||||||||||||||||||||| |||||||| || | |
|
|
| T |
35429865 |
acacatagacttctctaactctcacccaatgccccagtacacccacactctcacaaagcaaatatttaaactaagtcagatataagcttaaagtgctact |
35429964 |
T |
|
| Q |
307 |
gactg |
311 |
Q |
| |
|
||||| |
|
|
| T |
35429965 |
gactg |
35429969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 61 - 350
Target Start/End: Original strand, 7400279 - 7400568
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgtt |
159 |
Q |
| |
|
||||| ||||||| ||||| |||||||||||| ||| |||||| ||| |||||| |||||||||||||| |||| ||||||||||||| || | || |
|
|
| T |
7400279 |
tgttaggaaataaaagggccgaagaagaaaaaataaatacaatcacaacataagaatataatgtggaaactctaaaacgggagaaaaaaccatgaccatt |
7400378 |
T |
|
| Q |
160 |
gtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctca-ctctcacct-aatgctccaggataaccacaccct |
257 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| ||||| | |||| || ||||| || |||||| | ||||||||| ||||| ||| | || ||||| || |
|
|
| T |
7400379 |
gtctaaaccgacaactaaaga-ttattactaggtgaatttttttacaatacatggacttctcttaactctcacctcaatgccccaatacaatcacactct |
7400477 |
T |
|
| Q |
258 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatata |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || |||| | || | |||| | ||||||||||||||||||||||| |
|
|
| T |
7400478 |
cacaaaacaaatatttaaactaagtcagatataagcttaaagtgctactgaccggtgcatctaaaaa--caaagaacctaggttcaatatata |
7400568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 144 - 311
Target Start/End: Original strand, 35428219 - 35428386
Alignment:
| Q |
144 |
aaaaaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccag |
243 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| | || || ||||||| |||||| ||||| ||| ||| | | || |
|
|
| T |
35428219 |
aaaaaccacgaccgttgtctaaaccgacaaccagagaattattactatgtgaaaattgttacaacacatagacttctctaactctgacccaataccctag |
35428318 |
T |
|
| Q |
244 |
gataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
35428319 |
tacacccacaacctcacaaaacaaatatttaaactaagtcagatataagcttaaagtgctactgactg |
35428386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 301
Target Start/End: Original strand, 30921521 - 30921673
Alignment:
| Q |
150 |
cacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataa |
248 |
Q |
| |
|
||||| |||||| |||||||||||| ||||| ||||||||||||||||| |||| || ||||||| |||||||||||||| ||||||| | || | || |
|
|
| T |
30921521 |
cacgaccgttgtttaaaccgacaacaagagaattattactatgtgaaattttttccaacacatagacttctctcactctcaccctaatgacctagtacaa |
30921620 |
T |
|
| Q |
249 |
ccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtg |
301 |
Q |
| |
|
|||| | |||||||| ||| |||||||||||| | |||||||||||||||||| |
|
|
| T |
30921621 |
ccacgctctcacaaagcaattatttaaactaacttagatataagtttaaagtg |
30921673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 18009382 - 18009313
Alignment:
| Q |
130 |
tccaaaatcggagaaaaaaccacgatcgttg--tctaaaccgacaactagagagttattactatgtgaaa |
197 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| |||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
18009382 |
tccaaaattggagaaaaaaccacgagcgttgtctctaaaccgacaaccagataattattactatgtgaaa |
18009313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 18009307 - 18009253
Alignment:
| Q |
257 |
tcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
311 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||| || |||||| |
|
|
| T |
18009307 |
tcacaaagaaaatatttaaactaagtcaaatataagtttaaagtgctactgactg |
18009253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 364
Target Start/End: Complemental strand, 14509036 - 14508733
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgta--atgtggaaactccaaaatcggagaaaaaaccacgatcgt |
158 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| || | ||||||||||||||| | |||||||||| | | ||| |
|
|
| T |
14509036 |
tgttaggaaataacagggctgaagaagaaaaataaacacaatcacaacacaagaatatataacgtggaaactccaaaaccagagaaaaaacg-caaccgt |
14508938 |
T |
|
| Q |
159 |
tgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaat-gctccaggataaccacaccct |
257 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||| | |||| || ||||||| |||||||||||||||| || || | || | |||||||| || |
|
|
| T |
14508937 |
tgtctaaaccgacaaccaaagaattattactatgtgaatttttttacaacacatagacttctctcactctcaccccatggccctagtacaaccacactct |
14508838 |
T |
|
| Q |
258 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
357 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||| |||||||| || |||||| | | |||| | | |||||||||||||||||||||| | ||| |
|
|
| T |
14508837 |
cacaaagcaaatatttaaactaggtcagatataagcttaaagtgctactgactggtacatctaaaaact--aagaacctaggttcaatatatagccttgg |
14508740 |
T |
|
| Q |
358 |
tcttccc |
364 |
Q |
| |
|
||||||| |
|
|
| T |
14508739 |
tcttccc |
14508733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 348
Target Start/End: Original strand, 10549908 - 10550115
Alignment:
| Q |
126 |
aaactccaaaatcggagaaaa-aaccacgatcgttgtctaaaccgacaactagagagttattactatgtgaaatgttttgcagtacatagatttctctca |
224 |
Q |
| |
|
||||| |||||||| |||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
10549908 |
aaacttcaaaatcgaagaaaaaaaccacgaccgttgtctataccgacaactagagaattattactatgtgaaattttt---------tagacttctctca |
10549998 |
T |
|
| Q |
225 |
ctctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaata |
324 |
Q |
| |
|
| || |||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| || |||||| || | |||| | |
|
|
| T |
10549999 |
c-----ccaaatgctccagtacaaccacactctcacaaaacaaatatttaaactgagtcagatataaacttaaagtgctactgactggtgcatctaaaaa |
10550093 |
T |
|
| Q |
325 |
tttaaagaacctaggttcaatata |
348 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10550094 |
--caaagaacctaggttcaatata |
10550115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 45676539 - 45676653
Alignment:
| Q |
60 |
atgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcg---gagaaaaaaccacgatc |
156 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||| | |||| || |||||||||| ||| ||||||| | ||||| | || |||||||||||| | |
|
|
| T |
45676539 |
atgttaggaaataacagggttgaagaagaaaaataaacacaattataacacaagaatataacgtggaaaatttaaaattggaagaaaaaaaaccacgacc |
45676638 |
T |
|
| Q |
157 |
gttgtctaaaccgac |
171 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
45676639 |
gttgtctaaaccgac |
45676653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 31322915 - 31322787
Alignment:
| Q |
75 |
agggctgaagaagaaaaataagcgcaatcattacacaa------gaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaac- |
167 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |||| ||| |||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
31322915 |
agggctgaagaagaaaaataagcacaatcacaacacaaaaacaagaatataacgtggaaactccaaaatcggaga-aaaaccacgactgttgtctaaaca |
31322817 |
T |
|
| Q |
168 |
--cgacaactagagagttattactatgtga |
195 |
Q |
| |
|
| ||||| ||||| ||||||| |||||| |
|
|
| T |
31322816 |
aacaacaaccagagaattattaccatgtga |
31322787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 31327314 - 31327200
Alignment:
| Q |
256 |
ctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcatt |
355 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||| |||||||| || | |||| |||| |||| || | |||||||||||| |||||||| |||| |
|
|
| T |
31327314 |
ctcataaaataaatatttaaattaagtcagatataaacttaaagtgctacttactggtgtatataaaaat--agagaacctaggttgaatatatagcatt |
31327217 |
T |
|
| Q |
356 |
gatcttccctttgcttc |
372 |
Q |
| |
|
| |||| |||||||||| |
|
|
| T |
31327216 |
ggtctttcctttgcttc |
31327200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 41848305 - 41848411
Alignment:
| Q |
209 |
acatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtg |
307 |
Q |
| |
|
||||||| |||||||||||| || |||| ||||| | |||||||| ||| |||||||||||||||||||| ||||||||||| | ||| || || || |
|
|
| T |
41848305 |
acatagacttctctcactctagccccaatgttccagtacaaccacactttcataaaacaaatatttaaactaaatcagatataagctaaaaatgctactg |
41848404 |
T |
|
| Q |
308 |
actgatg |
314 |
Q |
| |
|
||||||| |
|
|
| T |
41848405 |
actgatg |
41848411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 31322734 - 31322642
Alignment:
| Q |
211 |
atagatttctctcactctcacct--aatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtg |
301 |
Q |
| |
|
||||| || ||||||||||||| ||||| |||| | |||||| | | |||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
31322734 |
atagacttttctcactctcaccccaaatgccccagcacaaccactctcccacaaagaaaatatttaaactaagtcagatataagcttaaagtg |
31322642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 8445751 - 8445696
Alignment:
| Q |
61 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaat |
116 |
Q |
| |
|
||||| |||| |||||||||| ||||||||||||| | |||||| ||||||||||| |
|
|
| T |
8445751 |
tgttaggaaacaacagggctgcagaagaaaaataaacacaatcactacacaagaat |
8445696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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