View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15233_low_8 (Length: 227)
Name: NF15233_low_8
Description: NF15233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15233_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4714709 - 4714536
Alignment:
| Q |
1 |
ttcaatgacaaatttgtaccctctctaaatttaatttttctagtagtgcacacaatgatatataattagactcatgtgtaaaatatttttaaaccgtaaa |
100 |
Q |
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| T |
4714709 |
ttcaatgacaaatttgtaccctctctaaatttaatttttctagtagtgcacacaatgatatataattagactcatgtgtaaagtatttttaaaccgtaaa |
4714610 |
T |
|
| Q |
101 |
tgtgcagagttttttaaacaaatataaatgtagagctattaaacacttttattcattatttaaacaatccaatt |
174 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4714609 |
tgtgcagagttttttaaacaaatataaatgaagagctattaaacacttttattcattatttaaacaatccaatt |
4714536 |
T |
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