View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15237_high_19 (Length: 273)
Name: NF15237_high_19
Description: NF15237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15237_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 35526588 - 35526344
Alignment:
| Q |
18 |
atattaagccatcctaaatttattagtataaatcatacagggagccaaactaaaatcaagttagtgcaatttattctttaaattactcagcttctcatta |
117 |
Q |
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| T |
35526588 |
atattaagccatcctaaatttattagtataaatcatacagggagccaaactaaaatcaagttagtgcaatttattctttaaattactcagcttctcatta |
35526489 |
T |
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| Q |
118 |
tcataccataattgcctcaaaatttatgtcaatagatatttgtagaggtcaaaggtgggcaagagagaattcatgatagtgatgtttatgataaccttga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35526488 |
tcataccataattgcctcaaaatttatgtcaatagatatttgtagaggtcaaaggtgggcaagagagaattcatgatagtgatgtttatgataaccttga |
35526389 |
T |
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| Q |
218 |
accataaatacccgaggttgattttgttagataaccttgattcat |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35526388 |
accataaatacccgaggttgattttgttagataaccttgattcat |
35526344 |
T |
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