View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15237_low_13 (Length: 364)

Name: NF15237_low_13
Description: NF15237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15237_low_13
NF15237_low_13
[»] chr4 (23 HSPs)
chr4 (19-284)||(829576-829841)
chr4 (99-211)||(837648-837760)
chr4 (32-101)||(837785-837854)
chr4 (21-101)||(6372454-6372534)
chr4 (25-93)||(8443439-8443507)
chr4 (259-355)||(6387934-6388030)
chr4 (41-101)||(6392833-6392893)
chr4 (25-101)||(10482190-10482266)
chr4 (25-93)||(8447639-8447707)
chr4 (25-101)||(10468051-10468127)
chr4 (162-235)||(10493525-10493598)
chr4 (25-101)||(6388249-6388325)
chr4 (172-235)||(6392671-6392733)
chr4 (173-225)||(10467903-10467955)
chr4 (173-225)||(10482041-10482093)
chr4 (31-87)||(10571267-10571323)
chr4 (38-101)||(53774849-53774912)
chr4 (37-93)||(3557743-3557799)
chr4 (37-93)||(3565761-3565817)
chr4 (255-291)||(8437401-8437437)
chr4 (25-93)||(10460642-10460710)
chr4 (25-101)||(10464278-10464354)
chr4 (258-294)||(10493454-10493490)
[»] chr8 (1 HSPs)
chr8 (187-308)||(21258682-21258803)
[»] chr1 (2 HSPs)
chr1 (40-96)||(50645485-50645541)
chr1 (173-225)||(50645643-50645695)
[»] chr2 (2 HSPs)
chr2 (39-93)||(25377091-25377145)
chr2 (255-299)||(25376854-25376898)
[»] chr3 (2 HSPs)
chr3 (32-95)||(25915289-25915352)
chr3 (38-95)||(25901277-25901334)
[»] chr7 (8 HSPs)
chr7 (39-101)||(13416910-13416972)
chr7 (34-102)||(26217975-26218043)
chr7 (38-101)||(22063651-22063714)
chr7 (38-101)||(22100502-22100565)
chr7 (41-102)||(24035759-24035820)
chr7 (40-96)||(1985955-1986011)
chr7 (40-96)||(15571895-15571951)
chr7 (34-102)||(26256783-26256851)
[»] scaffold0867 (1 HSPs)
scaffold0867 (38-101)||(4667-4730)
[»] chr6 (1 HSPs)
chr6 (34-101)||(20770659-20770726)
[»] scaffold0354 (1 HSPs)
scaffold0354 (39-101)||(7472-7534)


Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 19 - 284
Target Start/End: Original strand, 829576 - 829841
Alignment:
Q  19 atttgctgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcataatgacaaaagcaaatac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  829576 atttgctgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcataatgacaaaagcaaatac 829675  T
Q  119 agtccatcaaacccacaagtgatggccgatagaacaactccttaacaaaaacctgaggcagccacaatttagtgtatgtctcagtggaaagatcaagtga 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  829676 agtccatcaaacccacaagtgatggccgatagaacaactccttaacaaaaacctgaggcagccacaatttagtgtatgtctcagtggaaagatcaagtga 829775  T
Q  219 aagaatcgtatattgctttaaactaaagtgatcgcaaagggccaacccgttaatagtaccactcaa 284  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||    
T  829776 aagaatcgcatattgctttgaaccaaagtgatcgcaaagggccaaccagttaatagtaccgctcaa 829841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 99 - 211
Target Start/End: Complemental strand, 837760 - 837648
Alignment:
Q  99 ataatgacaaaagcaaatacagtccatcaaacccacaagtgatggccgatagaacaactccttaacaaaaacctgaggcagccacaatttagtgtatgtc 198  Q
    |||||||||||||||||| ||| |||| |||  ||||||||||||| ||||||||  |||||||||||||||| |||||||| ||| || ||||||||||    
T  837760 ataatgacaaaagcaaatgcagcccattaaatgcacaagtgatggctgatagaaccgctccttaacaaaaacccgaggcagcaacagttgagtgtatgtc 837661  T
Q  199 tcagtggaaagat 211  Q
    |||| ||| ||||    
T  837660 tcagcggagagat 837648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 837854 - 837785
Alignment:
Q  32 aaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  837854 aaattatgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccata 837785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 6372534 - 6372454
Alignment:
Q  21 ttgctgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||||||| | ||||||||||||| ||||||||| | ||||||||||||| ||| ||||||||||||| ||||    
T  6372534 ttgctgaaaagaaattgttataactaattttatataattgaatctaagactcttgaactccagaatccttcatttgccata 6372454  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 8443439 - 8443507
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 93  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  8443439 tgaaaataaattctgataactaattttaaataattgaatccaagactcgtgaactccaaaatccttcat 8443507  T

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Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 6388030 - 6387934
Alignment:
Q  259 gccaacccgttaatagtaccactcaaatacacactattgttattaaacctgtaaagtggacgcatatggaagccttcaatatatctccaagaattat 355  Q
    ||||||| |||||||||| || |||||||||| | || ||||||||||||| |||||||| ||||  |||||| || ||||| ||||||||||||||    
T  6388030 gccaaccagttaatagtatcattcaaatacaccccatggttattaaacctgcaaagtggaagcatggggaagcattgaatatttctccaagaattat 6387934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 6392893 - 6392833
Alignment:
Q  41 taactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  6392893 taactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatttgccata 6392833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 10482266 - 10482190
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||   ||||| ||||||||||||||||| ||||    
T  10482266 tgaaaagaaattctgataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccata 10482190  T

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Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 8447639 - 8447707
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 93  Q
    |||||| ||||| |||||| |||||||||||||||||| ||||||||| ||||| || |||||||||||    
T  8447639 tgaaaataaattctgataattaattttaaataattgaatccaagactcatgaactccgaaatccttcat 8447707  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 10468127 - 10468051
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||| | |||| |||||||||||||||||| |||||||   ||||| ||||||||||||||||| ||||    
T  10468127 tgaaaagaaattcttataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccata 10468051  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 10493598 - 10493525
Alignment:
Q  162 aacaaaaacctgaggcagccacaatttagtgtatgtctcagtggaaagatcaagtgaaagaatcgtatattgct 235  Q
    ||||||| ||||||||| | ||| || |||||||||||||||||||||||| | ||||||||||  ||||||||    
T  10493598 aacaaaaccctgaggcaacaacagttgagtgtatgtctcagtggaaagatcgactgaaagaatcacatattgct 10493525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 6388325 - 6388249
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    ||||||||||||   |||||||||||| |||| ||||| ||||||||||||  | ||||||||||||||||| ||||    
T  6388325 tgaaaagaaattgctataactaatttttaatagttgaatccaagactcttgggcgccaaaatccttcatttgccata 6388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 6392733 - 6392671
Alignment:
Q  172 tgaggcagccacaatttagtgtatgtctcagtggaaagatcaagtgaaagaatcgtatattgct 235  Q
    ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||  ||||||||    
T  6392733 tgaggcagcaacaatttagtgtatgtctcagtggagaga-cgagtgaaagaatcacatattgct 6392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 10467955 - 10467903
Alignment:
Q  173 gaggcagccacaatttagtgtatgtctcagtggaaagatcaagtgaaagaatc 225  Q
    |||| ||| |||||| ||||||||||||||| || ||||||||||||||||||    
T  10467955 gaggtagcaacaattgagtgtatgtctcagttgagagatcaagtgaaagaatc 10467903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 10482093 - 10482041
Alignment:
Q  173 gaggcagccacaatttagtgtatgtctcagtggaaagatcaagtgaaagaatc 225  Q
    |||| ||| |||||| ||||||||||||||| || ||||||||||||||||||    
T  10482093 gaggtagcaacaattgagtgtatgtctcagttgagagatcaagtgaaagaatc 10482041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 10571267 - 10571323
Alignment:
Q  31 gaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatc 87  Q
    |||||| | ||||||||||||||| || |||| ||||||||||||||| ||||||||    
T  10571267 gaaattctcataactaattttaaacaactgaatccaagactcttgaactccaaaatc 10571323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 53774912 - 53774849
Alignment:
Q  38 tgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    ||||||||||||||||  ||||||  ||||||||||| ||| ||||| ||||||||||| ||||    
T  53774912 tgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccata 53774849  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 3557799 - 3557743
Alignment:
Q  37 atgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 93  Q
    |||||||||||||||||  ||||||  ||||||||||| ||| ||||| ||||||||    
T  3557799 atgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcat 3557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 3565817 - 3565761
Alignment:
Q  37 atgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 93  Q
    |||||||||||||||||  ||||||  ||||||||||| ||| ||||| ||||||||    
T  3565817 atgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcat 3565761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 8437401 - 8437437
Alignment:
Q  255 aagggccaacccgttaatagtaccactcaaatacaca 291  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  8437401 aagggccaaccagttaatagtaccattcaaatacaca 8437437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 10460710 - 10460642
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 93  Q
    |||||||||| | |||||||||||  |||||||||||  ||| ||||| ||||| ||||||| ||||||    
T  10460710 tgaaaagaaactctgataactaataataaataattgagtccatgactcgtgaactccaaaattcttcat 10460642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 10464354 - 10464278
Alignment:
Q  25 tgaaaagaaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||| ||||| | ||||| || |||| | ||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  10464354 tgaaaataaattcttataaccaactttatacaattgaatccaagactcctgatccccaaaatccttcatttgccata 10464278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 10493490 - 10493454
Alignment:
Q  258 ggccaacccgttaatagtaccactcaaatacacacta 294  Q
    |||||||  ||||||||||||||||||||||||||||    
T  10493490 ggccaacgagttaatagtaccactcaaatacacacta 10493454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 187 - 308
Target Start/End: Complemental strand, 21258803 - 21258682
Alignment:
Q  187 ttagtgtatgtctcagtggaaagatcaagtgaaagaatcgtatattgctttaaactaaagtgatcgcaaagggccaacccgttaatagtaccactcaaat 286  Q
    |||| ||||||||||||| ||||||||| ||||||||||  |||||||| | ||| |||||||||||||| ||||||||  |||||||||||||||||||    
T  21258803 ttagcgtatgtctcagtgaaaagatcaactgaaagaatcacatattgctctgaaccaaagtgatcgcaaacggccaaccaattaatagtaccactcaaat 21258704  T
Q  287 acacactattgttattaaacct 308  Q
    |||||| |||||||||||||||    
T  21258703 acacaccattgttattaaacct 21258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 50645485 - 50645541
Alignment:
Q  40 ataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttg 96  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  50645485 ataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttg 50645541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 50645643 - 50645695
Alignment:
Q  173 gaggcagccacaatttagtgtatgtctcagtggaaagatcaagtgaaagaatc 225  Q
    |||||||| ||| || |||||||||||| ||||| ||||||||||||||||||    
T  50645643 gaggcagcaacagttgagtgtatgtctcggtggagagatcaagtgaaagaatc 50645695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 25377145 - 25377091
Alignment:
Q  39 gataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 93  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcat 25377091  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 25376898 - 25376854
Alignment:
Q  255 aagggccaacccgttaatagtaccactcaaatacacactattgtt 299  Q
    ||||||||||| | |||||||||||||||||||||||| ||||||    
T  25376898 aagggccaaccaggtaatagtaccactcaaatacacaccattgtt 25376854  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 25915289 - 25915352
Alignment:
Q  32 aaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcattt 95  Q
    ||||| |||||||||||||| || ||||||| ||||||||||||||| | ||||||||||||||    
T  25915289 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattt 25915352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 25901277 - 25901334
Alignment:
Q  38 tgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcattt 95  Q
    |||||||||||||| || ||||||| ||||||||||||||| | ||||||||||||||    
T  25901277 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattt 25901334  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 13416910 - 13416972
Alignment:
Q  39 gataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||||||  |||| |||||||||||||| ||| ||||| ||||||||||| ||||    
T  13416910 gataactaattttaacgaattcaacccaagactcttcaactccaaattccttcatttgccata 13416972  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 26218043 - 26217975
Alignment:
Q  34 attatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcataa 102  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||| ||| | |||||||| || |||||    
T  26218043 attatggtaactaatcttaaataattgagaccaagactcttgaactccatactccttcatctgccataa 26217975  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 22063714 - 22063651
Alignment:
Q  38 tgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||||| ||||| |||  ||||||||||||||  ||||| ||||||||||| ||||    
T  22063714 tgataactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccata 22063651  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 22100565 - 22100502
Alignment:
Q  38 tgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||||| ||||| |||  ||||||||||||||| ||||| | ||||||||| ||||    
T  22100565 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccata 22100502  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 24035820 - 24035759
Alignment:
Q  41 taactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcataa 102  Q
    |||||||| ||||||||||||  ||||||||||||||| ||  | ||||||||||| |||||    
T  24035820 taactaatcttaaataattgagtccaagactcttgaacgccgtactccttcatttgccataa 24035759  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 1985955 - 1986011
Alignment:
Q  40 ataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttg 96  Q
    ||||||||||||||| ||||||  |||||| |||| ||| ||||| |||||||||||    
T  1985955 ataactaattttaaacaattgagtccaagattcttcaacgccaaattccttcatttg 1986011  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15571895 - 15571951
Alignment:
Q  40 ataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttg 96  Q
    |||||||||||||   ||||||||||||||||||| ||| ||||| ||| |||||||    
T  15571895 ataactaattttatggaattgaacccaagactcttcaactccaaactccctcatttg 15571951  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 26256851 - 26256783
Alignment:
Q  34 attatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcataa 102  Q
    |||||| || ||||| ||||||||||||  ||||||||||||||| ||| | |||||||| || |||||    
T  26256851 attatggtagctaatcttaaataattgagtccaagactcttgaactccatactccttcatctgccataa 26256783  T

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Target: scaffold0867 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 4667 - 4730
Alignment:
Q  38 tgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||||||||||||| ||||| |||  ||||||||||||||| ||||| | ||||||||| ||||    
T  4667 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccata 4730  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 20770726 - 20770659
Alignment:
Q  34 attatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    ||||||||||||||||||||  ||||||| ||| ||||||| ||  ||||| ||||||||||| ||||    
T  20770726 attatgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccata 20770659  T

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Target: scaffold0354 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 7534 - 7472
Alignment:
Q  39 gataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcatttggcata 101  Q
    |||| ||||||||||  ||||||||||||||||| | ||| ||||| ||||||||||| ||||    
T  7534 gatagctaattttaaggaattgaacccaagactcatcaactccaaattccttcatttgccata 7472  T

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