View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15237_low_14 (Length: 344)

Name: NF15237_low_14
Description: NF15237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15237_low_14
NF15237_low_14
[»] chr1 (39 HSPs)
chr1 (33-330)||(26541760-26542057)
chr1 (2-34)||(3552557-3552589)
chr1 (2-34)||(50776413-50776445)
chr1 (2-37)||(31787321-31787356)
chr1 (2-37)||(34967325-34967360)
chr1 (1-36)||(40403692-40403727)
chr1 (2-44)||(10085963-10086005)
chr1 (2-36)||(38817100-38817134)
chr1 (2-35)||(3163425-3163458)
chr1 (1-34)||(8330391-8330424)
chr1 (1-34)||(8711875-8711908)
chr1 (1-34)||(16128542-16128575)
chr1 (1-34)||(16705545-16705578)
chr1 (1-34)||(26551469-26551502)
chr1 (1-34)||(29095498-29095531)
chr1 (1-34)||(29672553-29672586)
chr1 (1-34)||(39282783-39282816)
chr1 (2-35)||(44343640-44343673)
chr1 (1-34)||(51905594-51905627)
chr1 (2-34)||(2458740-2458772)
chr1 (2-34)||(3550241-3550273)
chr1 (2-34)||(4750197-4750229)
chr1 (2-34)||(7318574-7318606)
chr1 (2-34)||(13985266-13985298)
chr1 (2-34)||(14794917-14794949)
chr1 (2-34)||(18127587-18127619)
chr1 (2-34)||(23625095-23625127)
chr1 (2-34)||(24584037-24584069)
chr1 (2-34)||(26835080-26835112)
chr1 (2-34)||(31023587-31023619)
chr1 (2-34)||(32558149-32558181)
chr1 (2-34)||(39673495-39673527)
chr1 (2-34)||(43554819-43554851)
chr1 (2-34)||(45467053-45467085)
chr1 (2-34)||(46160583-46160615)
chr1 (2-34)||(46398851-46398883)
chr1 (2-34)||(47393379-47393411)
chr1 (2-34)||(49980264-49980296)
chr1 (2-34)||(52701786-52701818)
[»] chr6 (30 HSPs)
chr6 (2-37)||(78169-78204)
chr6 (2-42)||(10364442-10364482)
chr6 (4-34)||(16971369-16971399)
chr6 (1-34)||(12506797-12506830)
chr6 (2-35)||(29818435-29818468)
chr6 (2-31)||(30739152-30739181)
chr6 (2-34)||(2603393-2603425)
chr6 (2-34)||(6612627-6612659)
chr6 (2-34)||(6835964-6835996)
chr6 (2-34)||(8415001-8415033)
chr6 (2-34)||(8493395-8493427)
chr6 (2-34)||(9660223-9660255)
chr6 (2-34)||(11173484-11173516)
chr6 (2-34)||(11615605-11615637)
chr6 (2-34)||(12058819-12058851)
chr6 (2-34)||(12499468-12499500)
chr6 (2-34)||(12509401-12509433)
chr6 (2-34)||(13631060-13631092)
chr6 (2-34)||(15498084-15498116)
chr6 (2-34)||(16524515-16524547)
chr6 (2-34)||(18105875-18105907)
chr6 (2-34)||(19687728-19687760)
chr6 (2-34)||(21858778-21858810)
chr6 (2-34)||(24052949-24052981)
chr6 (2-34)||(26409299-26409331)
chr6 (2-34)||(30510752-30510784)
chr6 (2-34)||(31493132-31493164)
chr6 (2-34)||(31498521-31498553)
chr6 (2-34)||(32588928-32588960)
chr6 (2-34)||(35039832-35039864)
[»] chr4 (40 HSPs)
chr4 (1-48)||(37390746-37390793)
chr4 (2-40)||(23621874-23621912)
chr4 (2-39)||(42629574-42629611)
chr4 (2-36)||(23138469-23138503)
chr4 (1-42)||(34247006-34247048)
chr4 (1-42)||(16605179-16605220)
chr4 (1-34)||(25367241-25367274)
chr4 (1-34)||(33599781-33599814)
chr4 (2-34)||(2409994-2410026)
chr4 (2-34)||(4293926-4293958)
chr4 (2-34)||(6629122-6629154)
chr4 (2-34)||(10125478-10125510)
chr4 (2-34)||(11248745-11248777)
chr4 (2-34)||(15986370-15986402)
chr4 (2-34)||(16032542-16032574)
chr4 (2-34)||(18052968-18053000)
chr4 (2-34)||(21634820-21634852)
chr4 (2-34)||(22101167-22101199)
chr4 (2-34)||(26882975-26883007)
chr4 (2-34)||(27383432-27383464)
chr4 (2-34)||(29494760-29494792)
chr4 (2-34)||(30088595-30088627)
chr4 (2-34)||(30649583-30649615)
chr4 (2-34)||(32402932-32402964)
chr4 (2-34)||(33244766-33244798)
chr4 (2-34)||(33501590-33501622)
chr4 (2-34)||(34447883-34447915)
chr4 (2-34)||(36871246-36871278)
chr4 (2-34)||(36937450-36937482)
chr4 (2-34)||(41858965-41858997)
chr4 (2-34)||(41987960-41987992)
chr4 (2-34)||(44622215-44622247)
chr4 (2-34)||(45250322-45250354)
chr4 (2-34)||(48380825-48380857)
chr4 (2-34)||(51625089-51625121)
chr4 (2-34)||(52809071-52809103)
chr4 (2-34)||(53690490-53690522)
chr4 (2-34)||(55968793-55968825)
chr4 (2-34)||(56235401-56235433)
chr4 (2-34)||(56513452-56513484)
[»] chr7 (38 HSPs)
chr7 (1-34)||(34715419-34715452)
chr7 (2-34)||(8565761-8565793)
chr7 (2-37)||(31581974-31582009)
chr7 (2-36)||(21177463-21177497)
chr7 (1-35)||(38589676-38589710)
chr7 (1-34)||(7979244-7979277)
chr7 (1-34)||(17833164-17833197)
chr7 (1-34)||(32827101-32827134)
chr7 (2-34)||(2649152-2649184)
chr7 (2-34)||(3225687-3225719)
chr7 (2-34)||(6696618-6696650)
chr7 (2-34)||(17611302-17611334)
chr7 (2-34)||(18235137-18235169)
chr7 (2-34)||(18976190-18976222)
chr7 (2-34)||(22918414-22918446)
chr7 (2-34)||(23726373-23726405)
chr7 (2-34)||(25428432-25428464)
chr7 (2-34)||(27045305-27045337)
chr7 (2-34)||(28587186-28587218)
chr7 (2-34)||(31466300-31466332)
chr7 (2-34)||(31503060-31503092)
chr7 (2-34)||(32267527-32267559)
chr7 (2-34)||(33616378-33616410)
chr7 (2-38)||(33616630-33616666)
chr7 (2-34)||(35421659-35421691)
chr7 (2-34)||(36916918-36916950)
chr7 (2-34)||(38074753-38074785)
chr7 (2-34)||(39430333-39430365)
chr7 (2-34)||(40536782-40536814)
chr7 (2-34)||(40704640-40704672)
chr7 (2-34)||(41877952-41877984)
chr7 (2-34)||(42912208-42912240)
chr7 (2-34)||(43884123-43884155)
chr7 (2-34)||(44187134-44187166)
chr7 (2-34)||(44481238-44481270)
chr7 (2-34)||(45780659-45780691)
chr7 (2-34)||(46774361-46774393)
chr7 (2-34)||(46944486-46944518)
[»] chr8 (48 HSPs)
chr8 (2-34)||(34908933-34908965)
chr8 (2-36)||(29949350-29949384)
chr8 (2-36)||(35631279-35631313)
chr8 (1-34)||(899360-899393)
chr8 (2-35)||(1366998-1367031)
chr8 (1-34)||(11018669-11018702)
chr8 (1-34)||(12113343-12113376)
chr8 (1-34)||(16872357-16872390)
chr8 (1-34)||(28849207-28849240)
chr8 (1-34)||(37954167-37954200)
chr8 (2-35)||(38194463-38194496)
chr8 (1-34)||(39284447-39284480)
chr8 (1-34)||(42927366-42927399)
chr8 (2-34)||(167827-167859)
chr8 (2-34)||(543570-543602)
chr8 (2-34)||(548021-548053)
chr8 (2-34)||(597193-597225)
chr8 (2-34)||(600048-600080)
chr8 (2-34)||(5371792-5371824)
chr8 (2-34)||(5733145-5733177)
chr8 (2-34)||(6878764-6878796)
chr8 (2-34)||(9267800-9267832)
chr8 (2-34)||(9724836-9724868)
chr8 (2-34)||(13429320-13429352)
chr8 (2-34)||(17949433-17949465)
chr8 (2-34)||(18203016-18203048)
chr8 (2-34)||(19715479-19715511)
chr8 (2-34)||(22578457-22578489)
chr8 (2-34)||(23606435-23606467)
chr8 (2-34)||(23681715-23681747)
chr8 (2-34)||(24333260-24333292)
chr8 (2-34)||(24524434-24524466)
chr8 (2-34)||(24616766-24616798)
chr8 (2-34)||(25838470-25838502)
chr8 (2-34)||(27919423-27919455)
chr8 (2-34)||(29938542-29938574)
chr8 (2-34)||(30087725-30087757)
chr8 (2-34)||(30526409-30526441)
chr8 (2-34)||(31230476-31230508)
chr8 (2-34)||(31873417-31873449)
chr8 (2-34)||(34356766-34356798)
chr8 (2-34)||(38045166-38045198)
chr8 (2-34)||(38451206-38451238)
chr8 (2-34)||(38896456-38896488)
chr8 (2-34)||(42192222-42192254)
chr8 (2-34)||(44263104-44263136)
chr8 (2-34)||(45187164-45187196)
chr8 (2-34)||(45439767-45439799)
[»] chr5 (34 HSPs)
chr5 (2-34)||(13089865-13089897)
chr5 (2-40)||(2606412-2606450)
chr5 (2-36)||(2620036-2620070)
chr5 (2-35)||(4431764-4431797)
chr5 (1-34)||(9577471-9577504)
chr5 (1-34)||(36487534-36487567)
chr5 (2-34)||(2914675-2914707)
chr5 (2-34)||(4456645-4456677)
chr5 (2-34)||(7414867-7414899)
chr5 (2-34)||(8883450-8883482)
chr5 (3-35)||(11130404-11130436)
chr5 (2-34)||(13952241-13952273)
chr5 (2-34)||(13987798-13987830)
chr5 (2-34)||(14341995-14342027)
chr5 (2-34)||(20495689-20495721)
chr5 (2-34)||(21195034-21195066)
chr5 (2-34)||(24780962-24780994)
chr5 (2-34)||(27293296-27293328)
chr5 (2-34)||(27366231-27366263)
chr5 (2-34)||(27807740-27807772)
chr5 (2-34)||(28024822-28024854)
chr5 (2-34)||(28377887-28377919)
chr5 (2-34)||(29816456-29816488)
chr5 (2-34)||(32706983-32707015)
chr5 (2-34)||(34163375-34163407)
chr5 (2-34)||(34606793-34606825)
chr5 (2-34)||(35189427-35189459)
chr5 (2-34)||(36302256-36302288)
chr5 (2-34)||(36347204-36347236)
chr5 (2-34)||(39729558-39729590)
chr5 (2-34)||(40041151-40041183)
chr5 (2-34)||(40915411-40915443)
chr5 (2-34)||(42941018-42941050)
chr5 (2-34)||(43359904-43359936)
[»] chr2 (37 HSPs)
chr2 (2-42)||(44195815-44195855)
chr2 (1-35)||(7491450-7491484)
chr2 (2-40)||(27341579-27341617)
chr2 (2-36)||(40649303-40649337)
chr2 (1-34)||(3872428-3872461)
chr2 (1-34)||(4826542-4826575)
chr2 (1-34)||(6579952-6579985)
chr2 (1-34)||(6596717-6596750)
chr2 (2-35)||(9110883-9110916)
chr2 (1-34)||(18449927-18449960)
chr2 (1-34)||(27863229-27863262)
chr2 (1-34)||(30549567-30549600)
chr2 (1-34)||(37985774-37985807)
chr2 (2-34)||(3376430-3376462)
chr2 (2-34)||(3871008-3871040)
chr2 (2-34)||(5005020-5005052)
chr2 (2-34)||(5748455-5748487)
chr2 (2-34)||(6714138-6714170)
chr2 (2-34)||(8247135-8247167)
chr2 (2-34)||(12363872-12363904)
chr2 (2-34)||(12467881-12467913)
chr2 (2-34)||(14724051-14724083)
chr2 (2-34)||(14885270-14885302)
chr2 (2-34)||(19166179-19166211)
chr2 (2-34)||(22060899-22060931)
chr2 (2-34)||(22061231-22061263)
chr2 (2-34)||(24000122-24000154)
chr2 (2-34)||(26849820-26849852)
chr2 (2-34)||(28330996-28331028)
chr2 (2-34)||(29412082-29412114)
chr2 (2-34)||(31909573-31909605)
chr2 (2-34)||(37110999-37111031)
chr2 (2-34)||(40833720-40833752)
chr2 (2-34)||(41096177-41096209)
chr2 (2-34)||(42056288-42056320)
chr2 (2-34)||(43446785-43446817)
chr2 (2-34)||(44421828-44421860)
[»] chr3 (52 HSPs)
chr3 (1-35)||(23308027-23308061)
chr3 (1-34)||(4047076-4047109)
chr3 (1-34)||(14781144-14781177)
chr3 (2-43)||(17378423-17378464)
chr3 (1-34)||(25903906-25903939)
chr3 (2-35)||(29675111-29675144)
chr3 (1-34)||(30745103-30745136)
chr3 (1-34)||(32100079-32100112)
chr3 (1-34)||(34663681-34663714)
chr3 (1-34)||(43599820-43599853)
chr3 (1-34)||(48897037-48897070)
chr3 (1-34)||(49102684-49102717)
chr3 (2-35)||(52040246-52040279)
chr3 (2-38)||(3645699-3645735)
chr3 (2-34)||(4392325-4392357)
chr3 (2-34)||(6466331-6466363)
chr3 (1-37)||(7673901-7673937)
chr3 (2-34)||(8108687-8108719)
chr3 (2-34)||(12569543-12569575)
chr3 (2-34)||(13546007-13546039)
chr3 (2-34)||(13759636-13759668)
chr3 (2-34)||(19960823-19960855)
chr3 (2-34)||(21216664-21216696)
chr3 (2-34)||(22926288-22926320)
chr3 (2-34)||(23609231-23609263)
chr3 (2-34)||(29343454-29343486)
chr3 (2-34)||(30190575-30190607)
chr3 (2-34)||(33610088-33610120)
chr3 (2-34)||(33839796-33839828)
chr3 (2-34)||(34816902-34816934)
chr3 (2-34)||(38783439-38783471)
chr3 (2-34)||(40710510-40710542)
chr3 (2-34)||(41265763-41265795)
chr3 (2-34)||(41751353-41751385)
chr3 (2-34)||(41936160-41936192)
chr3 (2-34)||(43185596-43185628)
chr3 (2-34)||(43408511-43408543)
chr3 (2-34)||(44035394-44035426)
chr3 (2-34)||(45674117-45674149)
chr3 (2-34)||(45823884-45823916)
chr3 (2-34)||(46336942-46336974)
chr3 (2-34)||(47054248-47054280)
chr3 (2-34)||(48583881-48583913)
chr3 (2-34)||(51166280-51166312)
chr3 (2-34)||(51865941-51865973)
chr3 (2-34)||(52060269-52060301)
chr3 (2-34)||(52262476-52262508)
chr3 (2-34)||(52870435-52870467)
chr3 (2-34)||(53654964-53654996)
chr3 (2-34)||(53722409-53722441)
chr3 (2-34)||(54080108-54080140)
chr3 (2-34)||(54240823-54240855)
[»] scaffold0444 (1 HSPs)
scaffold0444 (2-34)||(7847-7879)
[»] scaffold0366 (1 HSPs)
scaffold0366 (2-34)||(49-81)
[»] scaffold0262 (1 HSPs)
scaffold0262 (2-34)||(4010-4042)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-34)||(23345-23377)
[»] scaffold0160 (1 HSPs)
scaffold0160 (2-34)||(25758-25790)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-34)||(151892-151924)
[»] scaffold0015 (1 HSPs)
scaffold0015 (3-35)||(20709-20741)


Alignment Details
Target: chr1 (Bit Score: 286; Significance: 1e-160; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 33 - 330
Target Start/End: Original strand, 26541760 - 26542057
Alignment:
Q  33 tactacttaattcttcttccttcacttaagcttgtcatcttggtcattcttaatccctttaacaacccaaacaaaatcttaatcctttacaatgttcaca 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  26541760 tactacttaattcttcttccttcacttaagcttgtcatcttggtcattcttaatccccttaacaacccaaacaaaatcttaatcctttacaatgttcacg 26541859  T
Q  133 tgccatgtgaaatttcaatatccaaaatttatctcaaaacctttatcactttaattggtgttcaaccgtccatttatcaacataagttccatattttctt 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26541860 tgccatgtgaaatttaaatatccaaaatttatctcaaaacctttatcactttaattggtgttcaaccgtccatttatcaacataagttccatattttctt 26541959  T
Q  233 aacatttcttccaccacaccttaattctcttcaacttaaaaatcaaactagtccaaaatatttatagattttccactaactctttcattctagtttca 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26541960 aacatttcttccaccacaccttaattctcttcaacttaaaaatcaaactagtccaaaatatttatagattttccactaactctttcattctagtttca 26542057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 3552589 - 3552557
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||||||||    
T  3552589 caaaacgtcatacaatttgggatggagggagta 3552557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 50776413 - 50776445
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||||||||    
T  50776413 caaaacgtcatacaatttgggatggagggagta 50776445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 31787321 - 31787356
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtacta 37  Q
    |||||||||||||||||||||| |||||||||||||    
T  31787321 caaaacgtcatacaatttgggacggagggagtacta 31787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 34967360 - 34967325
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtacta 37  Q
    |||||||||||||||||||||| |||||||||||||    
T  34967360 caaaacgtcatacaatttgggacggagggagtacta 34967325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 40403727 - 40403692
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtact 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  40403727 tcaaaacgtcatacaatttgggatggagggactact 40403692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 10085963 - 10086005
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactacttaatt 44  Q
    |||||||||||||||||||||| ||||||||||  ||||||||    
T  10085963 caaaacgtcatacaatttgggacggagggagtataacttaatt 10086005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 38817100 - 38817134
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  38817100 caaaacgtcatacaatttgggacggagggagtact 38817134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 3163425 - 3163458
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  3163425 caaaacgtcatacaatttgggacggagggagtac 3163458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8330391 - 8330424
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  8330391 tcaaaacgtcatacaatttgggacggagggagta 8330424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8711908 - 8711875
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  8711908 tcaaaacgtcatacaatttgggacggagggagta 8711875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16128575 - 16128542
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16128575 tcaaaacgtcatacaatttgggacggagggagta 16128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16705545 - 16705578
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16705545 tcaaaacgtcatacaatttgggacggagggagta 16705578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26551502 - 26551469
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  26551502 tcaaaacgtcatacaatttgggacggagggagta 26551469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29095498 - 29095531
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  29095498 tcaaaacgtcatacaatttgggacggagggagta 29095531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29672553 - 29672586
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  29672553 tcaaaacgtcatacaatttgggacggagggagta 29672586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39282783 - 39282816
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  39282783 tcaaaacgtcatacaatttgggacggagggagta 39282816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 44343673 - 44343640
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  44343673 caaaacgtcatacaatttgggacggagggagtac 44343640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51905627 - 51905594
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51905627 tcaaaacgtcatacaatttgggacggagggagta 51905594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 2458740 - 2458772
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  2458740 caaaacgtcatacaatttgggacggagggagta 2458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 3550241 - 3550273
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  3550241 caaaacgtcatacaatttgggacggagggagta 3550273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 4750229 - 4750197
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  4750229 caaaacgtcatacaatttgggacggagggagta 4750197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 7318606 - 7318574
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  7318606 caaaacgtcatacaatttgggacggagggagta 7318574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 13985298 - 13985266
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||||||| |||||    
T  13985298 caaaacgtcatacaatttgggatggagagagta 13985266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 14794949 - 14794917
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  14794949 caaaacgtcatacaatttgggacggagggagta 14794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 18127587 - 18127619
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  18127587 caaaacgtcatacaatttgggacggagggagta 18127619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 23625095 - 23625127
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  23625095 caaaacgtcatacaatttgggacggagggagta 23625127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 24584037 - 24584069
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24584037 caaaacgtcatacaatttgggacggagggagta 24584069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 26835080 - 26835112
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  26835080 caaaacgtcatacaatttgggacggagggagta 26835112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 31023619 - 31023587
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  31023619 caaaacgtcatacaatttgggacggagggagta 31023587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 32558149 - 32558181
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  32558149 caaaacgtcatacaatttgggacggagggagta 32558181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 39673527 - 39673495
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  39673527 caaaacgtcatacaatttgggacggagggagta 39673495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 43554851 - 43554819
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  43554851 caaaacgtcatacaatttgggacggagggagta 43554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 45467085 - 45467053
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45467085 caaaacgtcatacaatttgggacggagggagta 45467053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 46160583 - 46160615
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  46160583 caaaacgtcatacaatttgggacggagggagta 46160615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 46398851 - 46398883
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  46398851 caaaacgtcatacaatttgggacggagggagta 46398883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 47393411 - 47393379
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  47393411 caaaacgtcatacaatttgggacggagggagta 47393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 49980296 - 49980264
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  49980296 caaaacgtcatacaatttgggacggagggagta 49980264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 52701818 - 52701786
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  52701818 caaaacgtcatacaatttgggacggagggagta 52701786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 78204 - 78169
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtacta 37  Q
    ||||||||||||||||||||||||||||||||||||    
T  78204 caaaacgtcatacaatttgggatggagggagtacta 78169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 10364482 - 10364442
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactacttaa 42  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  10364482 caaaacgtcatacaatttgggacggagggagtaatacttaa 10364442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 16971369 - 16971399
Alignment:
Q  4 aaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||||||    
T  16971369 aaacgtcatacaatttgggatggagggagta 16971399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12506830 - 12506797
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12506830 tcaaaacgtcatacaatttgggacggagggagta 12506797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 29818435 - 29818468
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  29818435 caaaacgtcatacaatttgggacggagggagtac 29818468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 30739181 - 30739152
Alignment:
Q  2 caaaacgtcatacaatttgggatggaggga 31  Q
    ||||||||||||||||||||||||||||||    
T  30739181 caaaacgtcatacaatttgggatggaggga 30739152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 2603425 - 2603393
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  2603425 caaaacgtcatacaatttgggacggagggagta 2603393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 6612627 - 6612659
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6612627 caaaacgtcatacaatttgggacggagggagta 6612659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 6835964 - 6835996
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6835964 caaaacgtcatacaatttgggacggagggagta 6835996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 8415033 - 8415001
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  8415033 caaaacgtcatacaatttgggacggagggagta 8415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 8493427 - 8493395
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  8493427 caaaacgtcatacaatttgggacggagggagta 8493395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 9660255 - 9660223
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  9660255 caaaacgtcatacaatttgggacggagggagta 9660223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 11173484 - 11173516
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  11173484 caaaacgtcatacaatttgggacggagggagta 11173516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 11615605 - 11615637
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  11615605 caaaacgtcatacaatttgggacggagggagta 11615637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12058819 - 12058851
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  12058819 caaaacgtcatacaatttgggacggagggagta 12058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 12499500 - 12499468
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  12499500 caaaacgtcatacaatttgggacggagggagta 12499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12509401 - 12509433
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  12509401 caaaacgtcatacaatttgggacggagggagta 12509433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 13631092 - 13631060
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  13631092 caaaacgtcatacaatttgggacggagggagta 13631060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 15498084 - 15498116
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  15498084 caaaacgtcatacaatttgggacggagggagta 15498116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 16524547 - 16524515
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  16524547 caaaacgtcatacaatttgggacggagggagta 16524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 18105875 - 18105907
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  18105875 caaaacgtcatacaatttgggacggagggagta 18105907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19687760 - 19687728
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  19687760 caaaacgtcatacaatttgggacggagggagta 19687728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 21858778 - 21858810
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  21858778 caaaacgtcatacaatttgggacggagggagta 21858810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 24052981 - 24052949
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24052981 caaaacgtcatacaatttgggacggagggagta 24052949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 26409299 - 26409331
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  26409299 caaaacgtcatacaatttgggacggagggagta 26409331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 30510784 - 30510752
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30510784 caaaacgtcatacaatttgggacggagggagta 30510752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 31493132 - 31493164
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||| |||||||||||||||||||||    
T  31493132 caaaacgtcatgcaatttgggatggagggagta 31493164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 31498521 - 31498553
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||| |||||||||||||||||||||    
T  31498521 caaaacgtcatgcaatttgggatggagggagta 31498553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 32588928 - 32588960
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  32588928 caaaacgtcatacaatttgggacggagggagta 32588960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 35039864 - 35039832
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  35039864 caaaacgtcatacaatttgggacggagggagta 35039832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37390746 - 37390793
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtactacttaattcttc 48  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  37390746 tcaaaacgtcatacaatttgggacggagggagtacaacttaactcttc 37390793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 23621874 - 23621912
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactactt 40  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  23621874 caaaacgtcatacaatttgggacggagggagtactactt 23621912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 42629611 - 42629574
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactact 39  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42629611 caaaacgtcatacaatttgggatggagggagtaatact 42629574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 23138469 - 23138503
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  23138469 caaaacgtcatacaatttgggacggagggagtact 23138503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34247006 - 34247048
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta-ctacttaa 42  Q
    ||||||||||||||||||||||| |||||||||| ||||||||    
T  34247006 tcaaaacgtcatacaatttgggacggagggagtatctacttaa 34247048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16605220 - 16605179
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtactacttaa 42  Q
    ||||| || |||||||||||||| ||||||||||||||||||    
T  16605220 tcaaagcgacatacaatttgggacggagggagtactacttaa 16605179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25367274 - 25367241
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  25367274 tcaaaacgtcatacaatttgggacggagggagta 25367241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33599814 - 33599781
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  33599814 tcaaaacgtcatacaatttgggacggagggagta 33599781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 2409994 - 2410026
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  2409994 caaaacgtcatacaatttgggacggagggagta 2410026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 4293958 - 4293926
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  4293958 caaaacgtcatacaatttgggacggagggagta 4293926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 6629122 - 6629154
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6629122 caaaacgtcatacaatttgggacggagggagta 6629154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 10125510 - 10125478
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  10125510 caaaacgtcatacaatttgggacggagggagta 10125478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 11248777 - 11248745
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  11248777 caaaacgtcatacaatttgggacggagggagta 11248745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 15986402 - 15986370
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  15986402 caaaacgtcatacaatttgggacggagggagta 15986370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 16032542 - 16032574
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  16032542 caaaacgtcatacaatttgggacggagggagta 16032574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 18052968 - 18053000
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  18052968 caaaacgtcatacaatttgggacggagggagta 18053000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 21634820 - 21634852
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  21634820 caaaacgtcatacaatttgggacggagggagta 21634852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22101167 - 22101199
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  22101167 caaaacgtcatacaatttgggacggagggagta 22101199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 26882975 - 26883007
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  26882975 caaaacgtcatacaatttgggacggagggagta 26883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 27383464 - 27383432
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  27383464 caaaacgtcatacaatttgggacggagggagta 27383432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 29494792 - 29494760
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  29494792 caaaacgtcatacaatttgggacggagggagta 29494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 30088627 - 30088595
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30088627 caaaacgtcatacaatttgggacggagggagta 30088595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 30649615 - 30649583
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30649615 caaaacgtcatacaatttgggacggagggagta 30649583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 32402932 - 32402964
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  32402932 caaaacgtcatacaatttgggacggagggagta 32402964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33244798 - 33244766
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  33244798 caaaacgtcatacaatttgggacggagggagta 33244766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 33501590 - 33501622
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  33501590 caaaacgtcatacaatttgggacggagggagta 33501622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 34447883 - 34447915
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  34447883 caaaacgtcatacaatttgggacggagggagta 34447915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 36871278 - 36871246
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  36871278 caaaacgtcatacaatttgggacggagggagta 36871246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 36937450 - 36937482
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  36937450 caaaacgtcatacaatttgggacggagggagta 36937482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41858965 - 41858997
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41858965 caaaacgtcatacaatttgggacggagggagta 41858997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 41987992 - 41987960
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41987992 caaaacgtcatacaatttgggacggagggagta 41987960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 44622247 - 44622215
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  44622247 caaaacgtcatacaatttgggacggagggagta 44622215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 45250322 - 45250354
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45250322 caaaacgtcatacaatttgggacggagggagta 45250354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 48380825 - 48380857
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  48380825 caaaacgtcatacaatttgggacggagggagta 48380857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 51625089 - 51625121
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  51625089 caaaacgtcatacaatttgggacggagggagta 51625121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 52809071 - 52809103
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  52809071 caaaacgtcatacaatttgggacggagggagta 52809103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 53690490 - 53690522
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  53690490 caaaacgtcatacaatttgggacggagggagta 53690522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 55968793 - 55968825
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  55968793 caaaacgtcatacaatttgggacggagggagta 55968825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 56235401 - 56235433
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||| |||||||||||||    
T  56235401 caaaacgtcatacaatttgagatggagggagta 56235433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 56513484 - 56513452
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  56513484 caaaacgtcatacaatttgggacggagggagta 56513452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34715452 - 34715419
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  34715452 tcaaaacgtcatacaatttgggatggagggagta 34715419  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 8565793 - 8565761
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||||||||    
T  8565793 caaaacgtcatacaatttgggatggagggagta 8565761  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 31582009 - 31581974
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtacta 37  Q
    |||||||||||||||||||||| |||||||||||||    
T  31582009 caaaacgtcatacaatttgggacggagggagtacta 31581974  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 21177463 - 21177497
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  21177463 caaaacgtcatacaatttgggacggagggagtact 21177497  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38589676 - 38589710
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  38589676 tcaaaacgtcatacaatttgggacggagggagtac 38589710  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7979244 - 7979277
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  7979244 tcaaaacgtcatacaatttgggacggagggagta 7979277  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17833164 - 17833197
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  17833164 tcaaaacatcatacaatttgggatggagggagta 17833197  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32827134 - 32827101
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  32827134 tcaaaacgtcatacaatttgggacggagggagta 32827101  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 2649152 - 2649184
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  2649152 caaaacgtcatacaatttgggacggagggagta 2649184  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 3225687 - 3225719
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  3225687 caaaacgtcatacaatttgggacggagggagta 3225719  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 6696650 - 6696618
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6696650 caaaacgtcatacaatttgggacggagggagta 6696618  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 17611334 - 17611302
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  17611334 caaaacgtcatacaatttgggacggagggagta 17611302  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 18235137 - 18235169
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  18235137 caaaacgtcatacaatttgggacggagggagta 18235169  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 18976190 - 18976222
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  18976190 caaaacgtcatacaatttgggacggagggagta 18976222  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22918414 - 22918446
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  22918414 caaaacgtcatacaatttgggacggagggagta 22918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 23726405 - 23726373
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  23726405 caaaacgtcatacaatttgggacggagggagta 23726373  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 25428432 - 25428464
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  25428432 caaaacgtcatacaatttgggacggagggagta 25428464  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 27045305 - 27045337
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||| ||||||||||||||    
T  27045305 caaaacgtcatacaatttaggatggagggagta 27045337  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 28587186 - 28587218
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  28587186 caaaacgtcatacaatttgggacggagggagta 28587218  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 31466300 - 31466332
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  31466300 caaaacgtcatacaatttgggacggagggagta 31466332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 31503060 - 31503092
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  31503060 caaaacgtcatacaatttgggacggagggagta 31503092  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 32267559 - 32267527
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  32267559 caaaacgtcatacaatttgggacggagggagta 32267527  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33616410 - 33616378
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||| |||||||||||||||||||||||||    
T  33616410 caaaacgacatacaatttgggatggagggagta 33616378  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 33616630 - 33616666
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactac 38  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  33616630 caaaacgtcttacaatttgggacggagggagtactac 33616666  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 35421691 - 35421659
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  35421691 caaaacgtcatacaatttgggacggagggagta 35421659  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 36916918 - 36916950
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  36916918 caaaacgtcatacaatttgggacggagggagta 36916950  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 38074753 - 38074785
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  38074753 caaaacgtcatacaatttgggacggagggagta 38074785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 39430333 - 39430365
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  39430333 caaaacgtcatacaatttgggacggagggagta 39430365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 40536814 - 40536782
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  40536814 caaaacgtcatacaatttgggacggagggagta 40536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 40704640 - 40704672
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  40704640 caaaacgtcatacaatttgggacggagggagta 40704672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41877952 - 41877984
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41877952 caaaacgtcatacaatttgggacggagggagta 41877984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 42912240 - 42912208
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  42912240 caaaacgtcatacaatttgggacggagggagta 42912208  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 43884155 - 43884123
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  43884155 caaaacgtcatacaatttgggacggagggagta 43884123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 44187134 - 44187166
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  44187134 caaaacgtcatacaatttgggacggagggagta 44187166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 44481238 - 44481270
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  44481238 caaaacgtcatacaatttgggacggagggagta 44481270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 45780691 - 45780659
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45780691 caaaacgtcatacaatttgggacggagggagta 45780659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 46774361 - 46774393
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  46774361 caaaacgtcatacaatttgggacggagggagta 46774393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 46944518 - 46944486
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  46944518 caaaacgtcatacaatttgggacggagggagta 46944486  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 34908933 - 34908965
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||||||||    
T  34908933 caaaacgtcatacaatttgggatggagggagta 34908965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 29949350 - 29949384
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  29949350 caaaacgtcatacaatttgggacggagggagtact 29949384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 35631279 - 35631313
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  35631279 caaaacgtcatacaatttgggacggagggagtact 35631313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 899393 - 899360
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  899393 tcaaaacgtcatacaatttgggacggagggagta 899360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 1366998 - 1367031
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  1366998 caaaacgtcatacaatttgggacggagggagtac 1367031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11018669 - 11018702
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  11018669 tcaaaacgtcatacaatttgggatggatggagta 11018702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12113376 - 12113343
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12113376 tcaaaacgtcatacaatttgggacggagggagta 12113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16872390 - 16872357
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16872390 tcaaaacgtcatacaatttgggacggagggagta 16872357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28849207 - 28849240
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  28849207 tcaaaacgtcatacaatttgggacggagggagta 28849240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37954200 - 37954167
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  37954200 tcaaaacgtcatacaatttgggacggagggagta 37954167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 38194496 - 38194463
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  38194496 caaaacgtcatacaatttgggacggagggagtac 38194463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39284447 - 39284480
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  39284447 tcaaaacgtcatacaatttgggacggagggagta 39284480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42927366 - 42927399
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  42927366 tcaaaacgtcatacaatttgggacggagggagta 42927399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 167827 - 167859
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  167827 caaaacgtcatacaatttgggacggagggagta 167859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 543602 - 543570
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  543602 caaaacgtcatacaatttgggacggagggagta 543570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 548053 - 548021
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  548053 caaaacgtcatacaatttgggacggagggagta 548021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 597193 - 597225
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  597193 caaaacgtcatacaatttgggacggagggagta 597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 600080 - 600048
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||| |||||||||||||    
T  600080 caaaacgtcatacaatttgagatggagggagta 600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 5371792 - 5371824
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  5371792 caaaacgtcatacaatttgggacggagggagta 5371824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 5733177 - 5733145
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  5733177 caaaacgtcatacaatttgggacggagggagta 5733145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 6878764 - 6878796
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6878764 caaaacgtcatacaatttgggacggagggagta 6878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 9267832 - 9267800
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  9267832 caaaacgtcatacaatttgggacggagggagta 9267800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 9724836 - 9724868
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  9724836 caaaacgtcatacaatttgggacggagggagta 9724868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13429320 - 13429352
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  13429320 caaaacgtcatacaatttgggacggagggagta 13429352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 17949465 - 17949433
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  17949465 caaaacgtcatacaatttgggacggagggagta 17949433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 18203048 - 18203016
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  18203048 caaaacgtcatacaatttgggacggagggagta 18203016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 19715479 - 19715511
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  19715479 caaaacgtcatacaatttgggacggagggagta 19715511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22578457 - 22578489
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  22578457 caaaacgtcatacaatttgggacggagggagta 22578489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 23606435 - 23606467
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  23606435 caaaacgtcatacaatttgggacggagggagta 23606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 23681747 - 23681715
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||| ||||||||||||||    
T  23681747 caaaacgtcatacaatttaggatggagggagta 23681715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 24333260 - 24333292
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24333260 caaaacgtcatacaatttgggacggagggagta 24333292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 24524434 - 24524466
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24524434 caaaacgtcatacaatttgggacggagggagta 24524466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 24616766 - 24616798
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24616766 caaaacgtcatacaatttgggacggagggagta 24616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25838502 - 25838470
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  25838502 caaaacgtcatacaatttgggacggagggagta 25838470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 27919455 - 27919423
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  27919455 caaaacgtcatacaatttgggacggagggagta 27919423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 29938542 - 29938574
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  29938542 caaaacgtcatacaatttgggacggagggagta 29938574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 30087757 - 30087725
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30087757 caaaacgtcatacaatttgggacggagggagta 30087725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 30526409 - 30526441
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30526409 caaaacgtcatacaatttgggacggagggagta 30526441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 31230508 - 31230476
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  31230508 caaaacgtcatacaatttgggacggagggagta 31230476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 31873449 - 31873417
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  31873449 caaaacgtcatacaatttgggacggagggagta 31873417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 34356766 - 34356798
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  34356766 caaaacgtcatacaatttgggacggagggagta 34356798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 38045166 - 38045198
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  38045166 caaaacgtcatacaatttgggacggagggagta 38045198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 38451206 - 38451238
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||| |||||||||||||||||||||||    
T  38451206 caaaacgtcttacaatttgggatggagggagta 38451238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 38896488 - 38896456
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  38896488 caaaacgtcatacaatttgggacggagggagta 38896456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 42192254 - 42192222
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  42192254 caaaacgtcatacaatttgggacggagggagta 42192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 44263136 - 44263104
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  44263136 caaaacgtcatacaatttgggacggagggagta 44263104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 45187164 - 45187196
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45187164 caaaacgtcatacaatttgggacggagggagta 45187196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 45439767 - 45439799
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45439767 caaaacgtcatacaatttgggacggagggagta 45439799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 13089897 - 13089865
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||||||||    
T  13089897 caaaacgtcatacaatttgggatggagggagta 13089865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 2606450 - 2606412
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactactt 40  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  2606450 caaaacgtcatacaatttgggacggagggagtattactt 2606412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 2620070 - 2620036
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  2620070 caaaacgtcatacaatttgggacggagggagtact 2620036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 4431764 - 4431797
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  4431764 caaaacgtcatacaatttgggacggagggagtac 4431797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9577504 - 9577471
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9577504 tcaaaacgtcatacaatttgggacggagggagta 9577471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36487534 - 36487567
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  36487534 tcaaaacgtcatacaatttgggacggagggagta 36487567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 2914675 - 2914707
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  2914675 caaaacgtcatacaatttgggacggagggagta 2914707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 4456645 - 4456677
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  4456645 caaaacgtcatacaatttgggacggagggagta 4456677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 7414867 - 7414899
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  7414867 caaaacgtcatacaatttgggacggagggagta 7414899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 8883450 - 8883482
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  8883450 caaaacgtcatacaatttgggacggagggagta 8883482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 11130404 - 11130436
Alignment:
Q  3 aaaacgtcatacaatttgggatggagggagtac 35  Q
    ||||||||||||||||||||| |||||||||||    
T  11130404 aaaacgtcatacaatttgggacggagggagtac 11130436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13952241 - 13952273
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  13952241 caaaacgtcatacaatttgggacggagggagta 13952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13987798 - 13987830
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  13987798 caaaacgtcatacaatttgggacggagggagta 13987830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 14341995 - 14342027
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| |||||||||    
T  14341995 caaaacgtcatacaatttgggatagagggagta 14342027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 20495689 - 20495721
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  20495689 caaaacgtcatacaatttgggacggagggagta 20495721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 21195066 - 21195034
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  21195066 caaaacgtcatacaatttgggacggagggagta 21195034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 24780994 - 24780962
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24780994 caaaacgtcatacaatttgggacggagggagta 24780962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 27293328 - 27293296
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  27293328 caaaacgtcatacaatttgggacggagggagta 27293296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 27366263 - 27366231
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  27366263 caaaacgtcatacaatttgggacggagggagta 27366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 27807772 - 27807740
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  27807772 caaaacgtcatacaatttgggacggagggagta 27807740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 28024822 - 28024854
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  28024822 caaaacgtcatacaatttgggacggagggagta 28024854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 28377887 - 28377919
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  28377887 caaaacgtcatacaatttgggacggagggagta 28377919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 29816456 - 29816488
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  29816456 caaaacgtcatacaatttgggacggagggagta 29816488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 32706983 - 32707015
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  32706983 caaaacgtcatacaatttgggacggagggagta 32707015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 34163375 - 34163407
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  34163375 caaaacgtcatacaatttgggacggagggagta 34163407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 34606825 - 34606793
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  34606825 caaaacgtcatacaatttgggacggagggagta 34606793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 35189427 - 35189459
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  35189427 caaaacgtcatacaatttgggacggagggagta 35189459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 36302288 - 36302256
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||| ||||||    
T  36302288 caaaacgtcatacaatttgggatggatggagta 36302256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 36347236 - 36347204
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  36347236 caaaacgtcatacaatttgggacggagggagta 36347204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 39729590 - 39729558
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  39729590 caaaacgtcatacaatttgggacggagggagta 39729558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 40041151 - 40041183
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  40041151 caaaacgtcatacaatttgggacggagggagta 40041183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 40915443 - 40915411
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  40915443 caaaacgtcatacaatttgggacggagggagta 40915411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 42941018 - 42941050
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  42941018 caaaacgtcatacaatttgggacggagggagta 42941050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 43359904 - 43359936
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  43359904 caaaacgtcatacaatttgggacggagggagta 43359936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 44195815 - 44195855
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactacttaa 42  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  44195815 caaaacgtcatacaatttgggacggagggagtactatttaa 44195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7491484 - 7491450
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  7491484 tcaaaacgtcatacaatttgggacggagggagtac 7491450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 27341617 - 27341579
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactactt 40  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  27341617 caaaacgtcatataatttgggacggagggagtactactt 27341579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 40649303 - 40649337
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtact 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  40649303 caaaacgtcatacaatttgggacggagggagtact 40649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3872461 - 3872428
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  3872461 tcaaaacgtcatacaatttgggacggagggagta 3872428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4826542 - 4826575
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4826542 tcaaaacgtcatacaatttgggacggagggagta 4826575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6579952 - 6579985
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  6579952 tcaaaacgtcatacaatttgggacggagggagta 6579985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6596717 - 6596750
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  6596717 tcaaaacgtcatacaatttgggatggaaggagta 6596750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 9110883 - 9110916
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  9110883 caaaacgtcatacaatttgggacggagggagtac 9110916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18449960 - 18449927
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  18449960 tcaaaacgtcatacaatttgggacggagggagta 18449927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27863229 - 27863262
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  27863229 tcaaaacgtcatacaatttgggacggagggagta 27863262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30549600 - 30549567
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  30549600 tcaaaacgtcatacaatttgggacggagggagta 30549567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37985774 - 37985807
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  37985774 tcaaaacgtcatacaatttgggacggagggagta 37985807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 3376462 - 3376430
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  3376462 caaaacgtcatacaatttgggacggagggagta 3376430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 3871008 - 3871040
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  3871008 caaaacgtcatacaatttgggacggagggagta 3871040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 5005052 - 5005020
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  5005052 caaaacgtcatacaatttgggacggagggagta 5005020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 5748487 - 5748455
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  5748487 caaaacgtcatacaatttgggacggagggagta 5748455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 6714138 - 6714170
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6714138 caaaacgtcatacaatttgggacggagggagta 6714170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 8247167 - 8247135
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  8247167 caaaacgtcatacaatttgggacggagggagta 8247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12363872 - 12363904
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  12363872 caaaacgtcatacaatttgggacggagggagta 12363904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12467881 - 12467913
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  12467881 caaaacgtcatacaatttgggacggagggagta 12467913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 14724051 - 14724083
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  14724051 caaaacgtcatacaatttgggacggagggagta 14724083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 14885270 - 14885302
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  14885270 caaaacgtcatacaatttgggacggagggagta 14885302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19166211 - 19166179
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  19166211 caaaacgtcatacaatttgggacggagggagta 19166179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22060899 - 22060931
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  22060899 caaaacgtcatacaatttgggacggagggagta 22060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22061231 - 22061263
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  22061231 caaaacgtcatacaatttgggacggagggagta 22061263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 24000154 - 24000122
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  24000154 caaaacgtcatacaatttgggacggagggagta 24000122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 26849852 - 26849820
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  26849852 caaaacgtcatacaatttgggacggagggagta 26849820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 28330996 - 28331028
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  28330996 caaaacgtcatacaatttgggacggagggagta 28331028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 29412082 - 29412114
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  29412082 caaaacgtcatacaatttgggacggagggagta 29412114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 31909605 - 31909573
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  31909605 caaaacgtcatacaatttgggacggagggagta 31909573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 37111031 - 37110999
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  37111031 caaaacgtcatacaatttgggacggagggagta 37110999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 40833720 - 40833752
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  40833720 caaaacgtcatacaatttgggacggagggagta 40833752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41096177 - 41096209
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41096177 caaaacgtcatacaatttgggacggagggagta 41096209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 42056288 - 42056320
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  42056288 caaaacgtcatacaatttgggacggagggagta 42056320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 43446785 - 43446817
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||||||||| ||||    
T  43446785 caaaacgtcatacaatttgggatggaggaagta 43446817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 44421828 - 44421860
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  44421828 caaaacgtcatacaatttgggacggagggagta 44421860  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 23308027 - 23308061
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtac 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  23308027 tcaaaacgtcatacaatttgggacggagggagtac 23308061  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4047109 - 4047076
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4047109 tcaaaacgtcatacaatttgggacggagggagta 4047076  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14781144 - 14781177
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  14781144 tcaaaacgtcatacaatttgggacggagggagta 14781177  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 17378423 - 17378464
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactacttaat 43  Q
    |||||||||||||||||||||| |||||||||| ||| ||||    
T  17378423 caaaacgtcatacaatttgggacggagggagtagtacctaat 17378464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25903939 - 25903906
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  25903939 tcaaaacgtcatacaatttgggacggagggagta 25903906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 29675111 - 29675144
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  29675111 caaaacgtcatacaatttgggacggagggagtac 29675144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30745103 - 30745136
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  30745103 tcaaaacgtcatacaatttgggacggagggagta 30745136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32100112 - 32100079
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  32100112 tcaaaacgtcatacaatttgggacggagggagta 32100079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34663681 - 34663714
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  34663681 tcaaaacgtcatacaatttgggacggagggagta 34663714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43599820 - 43599853
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43599820 tcaaaacgtcatacaatttgggacggagggagta 43599853  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48897070 - 48897037
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  48897070 tcaaaacgtcatacaatttgggacggagggagta 48897037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49102684 - 49102717
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  49102684 tcaaaacgtcatacaatttgggacggagggagta 49102717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 52040279 - 52040246
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtac 35  Q
    |||||||||||||||||||||| |||||||||||    
T  52040279 caaaacgtcatacaatttgggacggagggagtac 52040246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 3645735 - 3645699
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagtactac 38  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  3645735 caaaacgtcatacaatttaggacggagggagtactac 3645699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 4392357 - 4392325
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  4392357 caaaacgtcatacaatttgggacggagggagta 4392325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 6466363 - 6466331
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6466363 caaaacgtcatacaatttgggacggagggagta 6466331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7673937 - 7673901
Alignment:
Q  1 tcaaaacgtcatacaatttgggatggagggagtacta 37  Q
    |||||||||||||||||||| || |||||||||||||    
T  7673937 tcaaaacgtcatacaatttgagacggagggagtacta 7673901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 8108687 - 8108719
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  8108687 caaaacgtcatacaatttgggacggagggagta 8108719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12569543 - 12569575
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  12569543 caaaacgtcatacaatttgggacggagggagta 12569575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13546007 - 13546039
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  13546007 caaaacgtcatacaatttgggacggagggagta 13546039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 13759668 - 13759636
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  13759668 caaaacgtcatacaatttgggacggagggagta 13759636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 19960855 - 19960823
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  19960855 caaaacgtcatacaatttgggacggagggagta 19960823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 21216696 - 21216664
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  21216696 caaaacgtcatacaatttgggacggagggagta 21216664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 22926288 - 22926320
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  22926288 caaaacgtcatacaatttgggacggagggagta 22926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 23609263 - 23609231
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  23609263 caaaacgtcatacaatttgggacggagggagta 23609231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 29343454 - 29343486
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  29343454 caaaacgtcatacaatttgggacggagggagta 29343486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 30190575 - 30190607
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30190575 caaaacgtcatacaatttgggacggagggagta 30190607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33610120 - 33610088
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  33610120 caaaacgtcatacaatttgggacggagggagta 33610088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33839828 - 33839796
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||| ||||||||||||||||||||    
T  33839828 caaaacgtcatataatttgggatggagggagta 33839796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 34816934 - 34816902
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  34816934 caaaacgtcatacaatttgggacggagggagta 34816902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 38783471 - 38783439
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  38783471 caaaacgtcatacaatttgggacggagggagta 38783439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 40710542 - 40710510
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  40710542 caaaacgtcatacaatttgggacggagggagta 40710510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41265763 - 41265795
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41265763 caaaacgtcatacaatttgggacggagggagta 41265795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41751353 - 41751385
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41751353 caaaacgtcatacaatttgggacggagggagta 41751385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 41936160 - 41936192
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  41936160 caaaacgtcatacaatttgggacggagggagta 41936192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 43185596 - 43185628
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  43185596 caaaacgtcatacaatttgggacggagggagta 43185628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 43408511 - 43408543
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  43408511 caaaacgtcatacaatttgggacggagggagta 43408543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 44035394 - 44035426
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  44035394 caaaacgtcatacaatttgggacggagggagta 44035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 45674149 - 45674117
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45674149 caaaacgtcatacaatttgggacggagggagta 45674117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 45823916 - 45823884
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  45823916 caaaacgtcatacaatttgggacggagggagta 45823884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 46336942 - 46336974
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  46336942 caaaacgtcatacaatttgggacggagggagta 46336974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 47054248 - 47054280
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  47054248 caaaacgtcatacaatttgggacggagggagta 47054280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 48583913 - 48583881
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  48583913 caaaacgtcatacaatttgggacggagggagta 48583881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 51166312 - 51166280
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    ||||||||| |||||||||||||||||||||||    
T  51166312 caaaacgtcgtacaatttgggatggagggagta 51166280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 51865941 - 51865973
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  51865941 caaaacgtcatacaatttgggacggagggagta 51865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 52060301 - 52060269
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  52060301 caaaacgtcatacaatttgggacggagggagta 52060269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 52262476 - 52262508
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  52262476 caaaacgtcatacaatttgggacggagggagta 52262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 52870467 - 52870435
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  52870467 caaaacgtcatacaatttgggacggagggagta 52870435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 53654996 - 53654964
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  53654996 caaaacgtcatacaatttgggacggagggagta 53654964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 53722409 - 53722441
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  53722409 caaaacgtcatacaatttgggacggagggagta 53722441  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 54080140 - 54080108
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  54080140 caaaacgtcatacaatttgggacggagggagta 54080108  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 54240855 - 54240823
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  54240855 caaaacgtcatacaatttgggacggagggagta 54240823  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 7847 - 7879
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  7847 caaaacgtcatacaatttgggacggagggagta 7879  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 81 - 49
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  81 caaaacgtcatacaatttgggacggagggagta 49  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 4010 - 4042
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||| ||||||||||||||    
T  4010 caaaacgtcatacaatttaggatggagggagta 4042  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 23377 - 23345
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  23377 caaaacgtcatacaatttgggacggagggagta 23345  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25790 - 25758
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  25790 caaaacgtcatacaatttgggacggagggagta 25758  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 151892 - 151924
Alignment:
Q  2 caaaacgtcatacaatttgggatggagggagta 34  Q
    |||||||||||||||||||||| ||||||||||    
T  151892 caaaacgtcatacaatttgggacggagggagta 151924  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 20709 - 20741
Alignment:
Q  3 aaaacgtcatacaatttgggatggagggagtac 35  Q
    ||||||||||||||||||||| |||||||||||    
T  20709 aaaacgtcatacaatttgggacggagggagtac 20741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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