View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15239_high_14 (Length: 209)
Name: NF15239_high_14
Description: NF15239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15239_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 5960105 - 5959973
Alignment:
| Q |
18 |
aaaatgggaagactatatacaagagtacacttggtgagaagacaattttactcgtctcgtaatagaaagtgacttcaagcttataattaatatagtttta |
117 |
Q |
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| T |
5960105 |
aaaatggggagactatatacaagagtacacttggtgagaagacaattttactcgtctcataatagaaagtgacttcaagcttataattaatatagtttta |
5960006 |
T |
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| Q |
118 |
gaaaattgtaagcctattgaaaataatcatgta |
150 |
Q |
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| T |
5960005 |
gaaaattgtaagcttattgaaaataatcatgta |
5959973 |
T |
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