View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15239_high_8 (Length: 291)
Name: NF15239_high_8
Description: NF15239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15239_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 6295685 - 6295955
Alignment:
| Q |
1 |
tgtgataggttattttgtctattttgtatgttcaagatatgttttctattgtttgtcattgttgagctgttgaatacatagcactagattaatctgtaac |
100 |
Q |
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| T |
6295685 |
tgtgacaggttattttgtctattttgtatgttcaagatatgttttctattatttgtcattgttgagctgttgaatacatagctctagattaatctgtaac |
6295784 |
T |
|
| Q |
101 |
actgtagaatagaattttaacatgaccatgcttaatgtttagggagcaatggtagtgaattttgtcacaatcattgagaaacttgaattgtttagtagct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
6295785 |
actgtagaatagaattttaacatgaccatgcttaatgtttagggagcaatggtagtgaattttgtcacaatcatttagaaacttgaattgtttagtagct |
6295884 |
T |
|
| Q |
201 |
ttcaaaacttctattgaaaagatattgatgttgtggaaacctttaccagtcctcttccttatcgaaaatgt |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
6295885 |
ttcaaaacttctattgaaaagatattgatgttgtggaaacatttaccagtcctcttccttatcgaaaatgt |
6295955 |
T |
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