View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15239_low_1 (Length: 697)

Name: NF15239_low_1
Description: NF15239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15239_low_1
NF15239_low_1
[»] chr2 (38 HSPs)
chr2 (1-374)||(10523809-10524181)
chr2 (1-402)||(39338866-39339262)
chr2 (457-679)||(10523583-10523805)
chr2 (1-234)||(7874145-7874371)
chr2 (6-126)||(387129-387248)
chr2 (36-402)||(17105095-17105457)
chr2 (1-82)||(14405197-14405278)
chr2 (12-70)||(1269494-1269552)
chr2 (12-70)||(22885145-22885203)
chr2 (1-70)||(4471934-4472003)
chr2 (29-102)||(14106553-14106626)
chr2 (12-70)||(13337285-13337343)
chr2 (12-70)||(16959993-16960051)
chr2 (22-82)||(23650384-23650444)
chr2 (6-70)||(36276178-36276241)
chr2 (32-70)||(4162052-4162090)
chr2 (16-70)||(15126426-15126480)
chr2 (12-69)||(2062901-2062958)
chr2 (1-70)||(5254267-5254336)
chr2 (12-81)||(10173590-10173659)
chr2 (21-70)||(33788653-33788702)
chr2 (22-119)||(37770663-37770760)
chr2 (12-59)||(7695985-7696032)
chr2 (187-234)||(16952563-16952610)
chr2 (187-234)||(17023228-17023275)
chr2 (187-234)||(17060534-17060581)
chr2 (187-234)||(17079023-17079070)
chr2 (35-70)||(23665439-23665474)
chr2 (32-66)||(9560820-9560854)
chr2 (24-70)||(31902438-31902484)
chr2 (13-63)||(42048229-42048279)
chr2 (21-70)||(25504930-25504979)
chr2 (29-70)||(27739986-27740027)
chr2 (37-82)||(41086825-41086870)
chr2 (12-60)||(16952395-16952443)
chr2 (12-60)||(17023060-17023108)
chr2 (12-60)||(17060366-17060414)
chr2 (12-60)||(17079190-17079238)
[»] chr8 (28 HSPs)
chr8 (6-402)||(37986864-37987256)
chr8 (1-402)||(32066296-32066692)
chr8 (1-402)||(24995396-24995789)
chr8 (1-402)||(36630521-36630917)
chr8 (1-305)||(34389006-34389305)
chr8 (1-313)||(9519272-9519579)
chr8 (134-319)||(31210319-31210505)
chr8 (10-126)||(31207372-31207487)
chr8 (12-360)||(10248565-10248907)
chr8 (1-118)||(15821380-15821497)
chr8 (6-102)||(16457467-16457562)
chr8 (330-402)||(34389303-34389375)
chr8 (1-104)||(12898275-12898378)
chr8 (316-402)||(34866350-34866436)
chr8 (6-74)||(41893406-41893474)
chr8 (12-64)||(32945715-32945767)
chr8 (12-70)||(15906697-15906755)
chr8 (12-66)||(17657014-17657068)
chr8 (1-59)||(20138448-20138506)
chr8 (12-70)||(30236140-30236198)
chr8 (18-70)||(33967337-33967389)
chr8 (24-70)||(10552279-10552325)
chr8 (32-70)||(40531243-40531281)
chr8 (24-70)||(35062468-35062514)
chr8 (33-66)||(36796621-36796654)
chr8 (12-56)||(3679471-3679515)
chr8 (21-81)||(17720727-17720786)
chr8 (12-64)||(41791276-41791328)
[»] chr1 (33 HSPs)
chr1 (1-402)||(46692820-46693216)
chr1 (1-402)||(31585761-31586158)
chr1 (1-402)||(30685905-30686301)
chr1 (6-402)||(24449936-24450329)
chr1 (6-402)||(20113527-20113918)
chr1 (1-305)||(41920234-41920532)
chr1 (1-402)||(24684479-24684873)
chr1 (1-310)||(5389422-5389726)
chr1 (6-226)||(7857515-7857728)
chr1 (1-104)||(5459138-5459241)
chr1 (1-384)||(24658629-24659009)
chr1 (6-369)||(46814473-46814830)
chr1 (12-234)||(32864573-32864791)
chr1 (6-118)||(27031846-27031958)
chr1 (12-82)||(17033585-17033655)
chr1 (12-70)||(19598647-19598705)
chr1 (21-82)||(6583237-6583298)
chr1 (338-402)||(41920164-41920228)
chr1 (21-82)||(9313310-9313371)
chr1 (21-70)||(38544759-38544808)
chr1 (12-70)||(15840924-15840982)
chr1 (12-62)||(27102210-27102260)
chr1 (29-70)||(4651791-4651832)
chr1 (29-70)||(30655571-30655612)
chr1 (312-408)||(16147246-16147341)
chr1 (29-104)||(34774848-34774922)
chr1 (20-70)||(22200019-22200069)
chr1 (20-70)||(27905423-27905473)
chr1 (32-70)||(38564912-38564950)
chr1 (21-71)||(46603402-46603452)
chr1 (269-369)||(7857368-7857469)
chr1 (6-66)||(2877652-2877711)
chr1 (29-69)||(42374175-42374215)
[»] chr5 (25 HSPs)
chr5 (1-384)||(18592945-18593323)
chr5 (1-402)||(698045-698441)
chr5 (1-305)||(34377880-34378178)
chr5 (284-402)||(29087232-29087350)
chr5 (7-203)||(29087364-29087555)
chr5 (21-196)||(7392052-7392221)
chr5 (12-214)||(13954246-13954441)
chr5 (12-70)||(7195251-7195309)
chr5 (21-81)||(33258903-33258963)
chr5 (21-69)||(39184208-39184256)
chr5 (22-81)||(25992007-25992066)
chr5 (16-66)||(21402853-21402903)
chr5 (12-70)||(22675336-22675394)
chr5 (311-362)||(26046270-26046321)
chr5 (12-126)||(8297423-8297537)
chr5 (31-81)||(26045995-26046045)
chr5 (12-70)||(27713080-27713138)
chr5 (33-66)||(12046270-12046303)
chr5 (21-81)||(14302451-14302511)
chr5 (12-104)||(17854079-17854171)
chr5 (23-70)||(23426355-23426402)
chr5 (24-63)||(31721695-31721734)
chr5 (21-70)||(8730928-8730977)
chr5 (38-70)||(25341709-25341741)
chr5 (12-52)||(39024462-39024502)
[»] chr7 (39 HSPs)
chr7 (1-402)||(47325886-47326282)
chr7 (1-402)||(38305945-38306341)
chr7 (1-402)||(3419657-3420054)
chr7 (6-402)||(10243871-10244257)
chr7 (1-402)||(37794685-37795069)
chr7 (1-402)||(25160500-25160895)
chr7 (1-281)||(5860289-5860564)
chr7 (7-402)||(33434792-33435183)
chr7 (1-281)||(3866922-3867196)
chr7 (6-167)||(41089754-41089910)
chr7 (1-211)||(35745828-35746031)
chr7 (1-234)||(34389815-34390042)
chr7 (1-101)||(6584889-6584989)
chr7 (12-104)||(42533264-42533356)
chr7 (12-71)||(13311849-13311908)
chr7 (12-70)||(6716748-6716806)
chr7 (24-70)||(9349760-9349806)
chr7 (12-66)||(24324810-24324864)
chr7 (14-81)||(3478352-3478419)
chr7 (29-70)||(38485567-38485608)
chr7 (12-362)||(8744877-8745222)
chr7 (12-103)||(16828948-16829039)
chr7 (254-369)||(42533502-42533617)
chr7 (12-70)||(1320805-1320863)
chr7 (12-94)||(11379139-11379221)
chr7 (12-66)||(12480901-12480955)
chr7 (12-82)||(16954652-16954722)
chr7 (1-59)||(44353565-44353623)
chr7 (32-70)||(46262151-46262189)
chr7 (44-228)||(44755486-44755663)
chr7 (12-70)||(1820014-1820072)
chr7 (23-81)||(9428128-9428186)
chr7 (35-69)||(17802851-17802885)
chr7 (12-70)||(23983206-23983264)
chr7 (32-70)||(27993568-27993606)
chr7 (32-70)||(35206725-35206763)
chr7 (24-82)||(46133302-46133360)
chr7 (36-70)||(25153231-25153265)
chr7 (12-70)||(48058666-48058724)
[»] chr4 (35 HSPs)
chr4 (6-402)||(30964125-30964516)
chr4 (1-399)||(8254714-8255107)
chr4 (1-399)||(8268132-8268525)
chr4 (6-402)||(4305409-4305800)
chr4 (6-73)||(38637238-38637305)
chr4 (12-82)||(25753171-25753241)
chr4 (35-216)||(31050697-31050871)
chr4 (6-171)||(30167570-30167729)
chr4 (12-125)||(53823433-53823546)
chr4 (12-214)||(22811172-22811367)
chr4 (16-70)||(40813797-40813851)
chr4 (25-126)||(39421038-39421139)
chr4 (12-82)||(21387216-21387286)
chr4 (12-82)||(46698797-46698867)
chr4 (1-118)||(2825746-2825863)
chr4 (10-70)||(36962626-36962685)
chr4 (11-70)||(39041285-39041344)
chr4 (12-70)||(6599957-6600015)
chr4 (12-70)||(38929838-38929896)
chr4 (22-82)||(49747526-49747586)
chr4 (260-402)||(19672786-19672928)
chr4 (35-70)||(53756767-53756802)
chr4 (12-70)||(2792286-2792344)
chr4 (21-70)||(2061759-2061808)
chr4 (29-66)||(16501746-16501783)
chr4 (37-70)||(37707392-37707425)
chr4 (31-66)||(26474851-26474886)
chr4 (32-70)||(10388572-10388610)
chr4 (12-70)||(28966878-28966936)
chr4 (20-70)||(35800500-35800550)
chr4 (15-73)||(41117982-41118040)
chr4 (31-68)||(12296061-12296098)
chr4 (29-70)||(19311372-19311412)
chr4 (29-126)||(48098288-48098385)
chr4 (32-64)||(17416541-17416573)
[»] chr3 (34 HSPs)
chr3 (1-402)||(20611467-20611863)
chr3 (1-402)||(34475755-34476150)
chr3 (68-402)||(47235399-47235729)
chr3 (1-402)||(19176187-19176582)
chr3 (6-402)||(2394259-2394655)
chr3 (1-402)||(45163532-45163935)
chr3 (1-267)||(2392507-2392768)
chr3 (1-362)||(40023573-40023924)
chr3 (6-226)||(23328356-23328567)
chr3 (1-73)||(17550965-17551037)
chr3 (6-83)||(43012373-43012450)
chr3 (1-94)||(9584054-9584147)
chr3 (21-77)||(14755286-14755342)
chr3 (23-90)||(31482875-31482942)
chr3 (12-70)||(47945717-47945775)
chr3 (1-70)||(45398807-45398876)
chr3 (30-70)||(14879446-14879486)
chr3 (12-71)||(5556580-5556639)
chr3 (12-70)||(30127273-30127332)
chr3 (12-82)||(14193939-14194009)
chr3 (32-70)||(20710740-20710778)
chr3 (21-70)||(33143970-33144019)
chr3 (21-66)||(37123397-37123442)
chr3 (21-66)||(39021297-39021342)
chr3 (31-126)||(25647639-25647734)
chr3 (33-70)||(24099360-24099397)
chr3 (13-70)||(31424247-31424304)
chr3 (12-64)||(1652898-1652950)
chr3 (12-63)||(823447-823498)
chr3 (144-203)||(4464073-4464132)
chr3 (12-70)||(2782081-2782139)
chr3 (12-70)||(19295877-19295935)
chr3 (1-50)||(47235729-47235778)
chr3 (330-362)||(37123114-37123146)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-402)||(35773-36169)
[»] chr6 (19 HSPs)
chr6 (1-360)||(3117219-3117573)
chr6 (6-402)||(16510307-16510690)
chr6 (12-126)||(20701815-20701929)
chr6 (12-70)||(32935351-32935409)
chr6 (23-70)||(26216042-26216089)
chr6 (40-126)||(3880623-3880709)
chr6 (21-80)||(9224042-9224101)
chr6 (23-70)||(26534742-26534789)
chr6 (15-66)||(34105428-34105479)
chr6 (12-70)||(34092806-34092864)
chr6 (31-82)||(21266112-21266163)
chr6 (126-216)||(15132643-15132732)
chr6 (12-65)||(13423482-13423535)
chr6 (29-70)||(34090374-34090415)
chr6 (35-70)||(7546464-7546499)
chr6 (23-81)||(12794114-12794173)
chr6 (12-71)||(33968625-33968684)
chr6 (34-70)||(12129228-12129264)
chr6 (12-56)||(32316393-32316437)
[»] scaffold0050 (1 HSPs)
scaffold0050 (15-214)||(36580-36773)
[»] scaffold0200 (1 HSPs)
scaffold0200 (12-82)||(19382-19452)
[»] scaffold0119 (1 HSPs)
scaffold0119 (12-70)||(42150-42208)
[»] scaffold1613 (1 HSPs)
scaffold1613 (21-70)||(1038-1087)
[»] scaffold0620 (2 HSPs)
scaffold0620 (15-70)||(3841-3896)
scaffold0620 (12-70)||(8140-8198)
[»] scaffold0063 (2 HSPs)
scaffold0063 (12-82)||(58126-58196)
scaffold0063 (302-362)||(57917-57977)


Alignment Details
Target: chr2 (Bit Score: 301; Significance: 1e-169; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 10524181 - 10523809
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaat----tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctc 96  Q
    |||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10524181 gcccaaaaaccaacttgagtcaaagaatatattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctc 10524082  T
Q  97 tcgcccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtcca 196  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  10524081 tcgcccccagtagaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtcca 10523987  T
Q  197 ccgaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgca 296  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  10523986 ccgaaaaccagcacacaatatgtaagatgaaagacatggcatgcgaaatttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacgca 10523887  T
Q  297 ccctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgta 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10523886 ccctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtatccatgta 10523809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 39338866 - 39339262
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | |||||||| |||||    
T  39338866 gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctcgc 39338965  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||| ||||||||     |||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||| || |||||||    
T  39338966 ccccggtacaccaaagaaaaac-----caaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccga 39339060  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||  ||||||    
T  39339061 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacacaccct 39339160  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||| | |||||||||||||||||||||    
T  39339161 ccaaacttcgtaaacacctaaaccacccaaaaagcacaaacaagagctagtaacgacgaacatggacccgtgtaacaggggttgcttctaaagaaaatca 39339260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 457 - 679
Target Start/End: Complemental strand, 10523805 - 10523583
Alignment:
Q  457 tcaatcattacttgaatatttatatcacataaatagagtggccactggtcacaagttatttagtgggacaaaagaaaaagatattaagccttattggaaa 556  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10523805 tcaatcattacttgaatatttatatcacataaatagagtggccactggtcacaagttatttagtgggacaaaagaaaaggatattaagccttattggaaa 10523706  T
Q  557 ggaaaaggactgtacatcccactacaaacaagcaatgcagcaagccaagtgatcctaatgaaacaaaaagcttgccttaaacacagccactaccttaata 656  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10523705 ggaaaaggactgtacatcccactacaaacaagcaatgcagcaagccaagtgatcctaatgaaacaaaaagcttgccttaaacacagacactaccttaata 10523606  T
Q  657 atcataagtctaagcaccatatc 679  Q
    |||||||||||||||||||||||    
T  10523605 atcataagtctaagcaccatatc 10523583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 7874371 - 7874145
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||  | ||||||||  ||||    
T  7874371 gcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatcgc 7874272  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    || | ||| || |||||      | |||| |||||||||| | | ||||||| |||||| || ||||||||  ||||||| |||  |||||| ||||||     
T  7874271 cctcggtacactagaga------acaccatatcaagtcaagc-aggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccgg 7874179  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatg 234  Q
    | ||||||||||||||| |||||||| |||||||    
T  7874178 acaccagcacacaatatttaagacgatagacatg 7874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 387248 - 387129
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| |||||||| | |||||||| |||| ||||     
T  387248 aaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccctcg-ccccg 387150  T
Q  106 gtagaccagagaaaaaccaaa 126  Q
    ||  |||||||||||||||||    
T  387149 gtgtaccagagaaaaaccaaa 387129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 36 - 402
Target Start/End: Complemental strand, 17105457 - 17105095
Alignment:
Q  36 cgatctcgaatcaaaa-gtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaaccaaatca 134  Q
    |||||||||||||||| |||||||||||| ||||||  || |||||||  |||||||||| ||| ||||  ||| |||| ||||| ||| ||     | |    
T  17105457 cgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaacacctaa-----tta 17105363  T
Q  135 agtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaatatgtaagacgaaagacatg 234  Q
    |||||||||| | ||||| |||||| ||||||||  |  || |||| |||  |||||  |||||| ||||||||||||||||||||||| ||||||||||    
T  17105362 agtcaaacaagg-ttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaagatgaaagacatg 17105264  T
Q  235 gcatgcgaagtttgaa-caacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaactccgtaaacacctaaaccacccgaaaa 333  Q
      ||| || | |  || || |||||||||||||| ||||||| ||| ||||||| |||| |||||||  |||| || ||||||||| |||  ||  ||||    
T  17105263 atatgagatggtgcaaacaccaaacaaatcaaaaggaaaaggctcatcacaacgggacaagcaccctctaaacaccctaaacaccttaacagccaaaaaa 17105164  T
Q  334 gcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    |  |||| ||||||||||||||||||||||| |||  |||| | |||| ||| || |||| ||||||||    
T  17105163 gtgcaaataagagctagtgacgacgaacatggacctgtgtagcagaggctgcctccaaaggaaatcacc 17105095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14405278 - 14405197
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||| |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  14405278 gcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaat 14405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 1269552 - 1269494
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1269552 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagact 1269494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 22885145 - 22885203
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22885145 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 22885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4472003 - 4471934
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||| ||||| ||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||    
T  4472003 gcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagact 4471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 14106553 - 14106626
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccc 102  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||  | |||||||| |||||||    
T  14106553 tgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccc 14106626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 13337343 - 13337285
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||    
T  13337343 aacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagact 13337285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 16960051 - 16959993
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  16960051 aacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact 16959993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 23650444 - 23650384
Alignment:
Q  22 aaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 36276178 - 36276241
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||    
T  36276178 aaaacaaacttgagtcaaaga-ttgactcccgatctcgaatcaaaagcgaacagcccaccagact 36276241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 4162052 - 4162090
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 15126426 - 15126480
Alignment:
Q  16 tgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||| |||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  15126426 tgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagact 15126480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 2062958 - 2062901
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagac 69  Q
    |||||||| ||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  2062958 aacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5254336 - 5254267
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||  ||||||   ||||||||||||| ||| ||||||||||||||||| |||||    
T  5254336 gcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagact 5254267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 10173590 - 10173659
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    |||||||| |||| || | ||| |||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  10173590 aacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaa 10173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 33788653 - 33788702
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  33788653 caaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagact 33788702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 37770663 - 37770760
Alignment:
Q  22 aaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaa 119  Q
    |||||||||||||| ||||  |||||||||||||||||||||||| ||  ||| |||||||  |  ||||||| ||| ||| | ||| ||||||||||    
T  37770663 aaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaa 37770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 7696032 - 7695985
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcgg 59  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||    
T  7696032 aacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 16952563 - 16952610
Alignment:
Q  187 aaccggtccaccgaaaaccagcacacaatatgtaagacgaaagacatg 234  Q
    |||| ||||| ||||||||||||||||||||||||||| || ||||||    
T  16952563 aaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 16952610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 17023228 - 17023275
Alignment:
Q  187 aaccggtccaccgaaaaccagcacacaatatgtaagacgaaagacatg 234  Q
    |||| ||||| ||||||||||||||||||||||||||| || ||||||    
T  17023228 aaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 17023275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 17060534 - 17060581
Alignment:
Q  187 aaccggtccaccgaaaaccagcacacaatatgtaagacgaaagacatg 234  Q
    |||| ||||| ||||||||||||||||||||||||||| || ||||||    
T  17060534 aaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 17060581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 17079070 - 17079023
Alignment:
Q  187 aaccggtccaccgaaaaccagcacacaatatgtaagacgaaagacatg 234  Q
    |||| ||||| ||||||||||||||||||||||||||| || ||||||    
T  17079070 aaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 17079023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 23665439 - 23665474
Alignment:
Q  35 ccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||| |||||    
T  23665439 ccgatctcgaatcaaaagtgatcggcccactagact 23665474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 9560820 - 9560854
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||||||||||||||||||||||| ||||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccacca 9560854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 31902438 - 31902484
Alignment:
Q  24 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  31902438 agaactgactcccgatctcgaattaaaagcgattggcccaccagact 31902484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 42048229 - 42048279
Alignment:
Q  13 acttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggccca 63  Q
    |||||||||||| || || |||||| ||||||||||||||||||| |||||    
T  42048229 acttgagtcaaaaaactggctcccggtctcgaatcaaaagtgatcagccca 42048279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 25504930 - 25504979
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| |||||||||||||||||| ||||| ||| || ||||||||||    
T  25504930 caaagaactgactcccgatctcgaattaaaagcgataggtccaccagact 25504979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 27740027 - 27739986
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||| |||||| |||||||||| |||||||||||||||||    
T  27740027 tgactctcgatcttgaatcaaaagcgatcggcccaccagact 27739986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 41086825 - 41086870
Alignment:
Q  37 gatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||    
T  41086825 gatctcgaatcaaaagtgattgacccaccagactatatgaccaaat 41086870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 16952395 - 16952443
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggc 60  Q
    |||||||| ||||||| || ||||||||||||||||||||  |||||||    
T  16952395 aacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 16952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 17023060 - 17023108
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggc 60  Q
    |||||||| ||||||| || ||||||||||||||||||||  |||||||    
T  17023060 aacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 17060366 - 17060414
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggc 60  Q
    |||||||| ||||||| || ||||||||||||||||||||  |||||||    
T  17060366 aacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 17079238 - 17079190
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggc 60  Q
    |||||||| ||||||| || ||||||||||||||||||||  |||||||    
T  17079238 aacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 37986864 - 37987256
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||| |||||||||     
T  37986864 aaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccccg 37986963  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| |||||||||||||     |||||||||||||| ||||| |||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  37986964 gtacaccagagaaaaac-----caaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaacc 37987058  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttc-aacacaacgtgacatgcaccctacaa 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| | |    
T  37987059 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaaacacaacgtgacacgcaccctccta 37987158  T
Q  305 actccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  37987159 actccgtaaacacctaaaccacccgaaaaacacaaacaagagctagtgacgacgaacatgtacccatgtaacaaaagttgcttctaaaggaaatcacc 37987256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 32066296 - 32066692
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  32066296 gcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcgc 32066395  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| || ||||||||||     ||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||||| |||||||    
T  32066396 ccccggtacactagagaaaaac-----caaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccga 32066490  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||  || |||    
T  32066491 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacatgacacacatcct 32066590  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  32066591 ccaaactttgtaaatacctaaaccacccgaagagcacaaacaagagctagtgacgacgaacatgtacccatgtaacagaggttgcttctaaaggaaatca 32066690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 24995396 - 24995789
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | | |||| |||||    
T  24995396 gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctcgc 24995495  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||||||| |||||||||||||     ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  24995496 ccccagtacaccagagaaaaac-----caaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccga 24995590  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||| ||||||||| ||||| | ||||||||| ||||||  |||| |    
T  24995591 aaaccagcacacaatatgtaagacgaaaaacatagcatacgaagtttaaacaacaaataaatcaaaaggaaaatgctcaacacaatgtgacaaccaccgt 24995690  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||   |||| |||| |||||| |||||||||||||||||||||||    
T  24995691 ccaaactccgtaaacacctaaaccacccaaaaagcactaacaagagctagtgacgac---catggacccgtgtaacagaggttgcttctaaagaaaatca 24995787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 36630917 - 36630521
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||| | |||||||| |||||    
T  36630917 gcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctcgc 36630818  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||| ||||||||||||     ||||||||||||||||||||| ||||||| || |||||||  ||||||||||||||||||| | |||||    
T  36630817 ccccggtacaccaaagaaaaaccaaa-----tcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccga 36630723  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || |||||||||||||||||   |||| |||||||    
T  36630722 aaaccaacacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacaaacaaatcacaaggaaaaggttcaacacaaaaggacacgcaccct 36630623  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||| ||||||    
T  36630622 ccaaactccgtagactcctaaaccacccaaaaggcacaaacaagagctagtgacgacgaacaaggacccgtgtaacagaggttgcttccaaaggaaatca 36630523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 34389006 - 34389305
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||    
T  34389006 gcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgc 34389105  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||  ||| |||||||||||||     |||||||||||||||||| |||||| ||||||||||||||||||  ||||||||||||||||||| | | |||    
T  34389106 ccctggtacaccagagaaaaac-----caaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcga 34389200  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||| |    
T  34389201 aaaccagcacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccgt 34389300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 9519579 - 9519272
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | |||||||| ||| |    
T  9519579 gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcac 9519480  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | || ||    
T  9519479 ccccggtacaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactga 9519385  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||| |  ||| ||    
T  9519384 aaaccagcacacaatatgtaagacgaaagaaatggcatgcgaagtttaaacaacaaacaaataaaaaggaaaaggctcaacacaacgtgatacacactct 9519285  T
Q  301 acaaactccgtaa 313  Q
     ||||||||||||    
T  9519284 ccaaactccgtaa 9519272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 134 - 319
Target Start/End: Original strand, 31210319 - 31210505
Alignment:
Q  134 aagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaa-tatgtaagacgaaagaca 232  Q
    ||||||||||||||||||| |||||||| |||||||||  | ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  31210319 aagtcaaacaaagattgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaatatgtaagacgaaagaca 31210418  T
Q  233 tggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaactccgtaaacacct 319  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  31210419 tggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccgaactccgtaaacacct 31210505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 31207372 - 31207487
Alignment:
Q  10 ccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtag 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||  |||     
T  31207372 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacc-ctcgcccctggtac 31207470  T
Q  110 accagagaaaaaccaaa 126  Q
    |||||||||||||||||    
T  31207471 accagagaaaaaccaaa 31207487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 12 - 360
Target Start/End: Original strand, 10248565 - 10248907
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||| | | ||| || ||||| | ||| |||| ||| ||||| ||| ||    
T  10248565 aacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacac 10248664  T
Q  112 cagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcaca 211  Q
    |||||||     | ||||||||||| |||||||| |||||| |||||| |||||||||||  ||||||| |||  ||| || |||||| |||||| ||||    
T  10248665 cagagaa-----acaccaaatcaagccaaacaaa-attgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccaca 10248758  T
Q  212 caatatgtaagacgaaagacatggcatg-cgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaactccg 310  Q
    ||| | ||||||| || |||| |||| |  |  ||   |||||||||| |||||||| ||| ||  | | | ||||| ||| ||| |||| ||||| ||     
T  10248759 caa-aagtaagacaaacgacaaggcaagtagtggtgcaaacaacaaaccaatcaaaaggaatagactaagctcaacgggacctgctccctccaaacacct 10248857  T
Q  311 taaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaa 360  Q
    ||||||||| ||| | || |||| | ||||||||||||||||||||||||    
T  10248858 taaacaccttaacaatccaaaaaactcaaacaagagctagtgacgacgaa 10248907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15821380 - 15821497
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||| | |||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||| |||||||  | |||||||| |||||    
T  15821380 gcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgc 15821479  T
Q  101 ccccagtagaccagagaa 118  Q
    || | ||| |||||||||    
T  15821480 cctcggtacaccagagaa 15821497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 16457467 - 16457562
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccc 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| | |||||| | ||| |||| |||||||    
T  16457467 aaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcgccc 16457562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 34389303 - 34389375
Alignment:
Q  330 aaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  34389303 aaaaacacaaacaagagctagtgacgacgaacatggacccgtgtaacagaggttgcttctaaaggaaatcacc 34389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12898275 - 12898378
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||||||| | | || ||||||| |||||||||||||||||||||||  ||||||||||||  ||||||||  ||||||||| |||||    
T  12898275 gccccaaaaccaacttgagttagataactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccctcgc 12898374  T
Q  101 cccc 104  Q
    ||||    
T  12898375 cccc 12898378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 316 - 402
Target Start/End: Original strand, 34866350 - 34866436
Alignment:
Q  316 acctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    ||||||||||| | ||||| |||| ||||||||| |||||||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  34866350 acctaaaccacgcaaaaaggacaaccaagagctattgacgacgaacatgaacccgtgtaacagaggttgcttctaaaggaaatcacc 34866436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 41893406 - 41893474
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatag 74  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  41893406 aaaaacaacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagactatag 41893474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 32945715 - 32945767
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccac 64  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  32945715 aacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccac 32945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 15906755 - 15906697
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  15906755 aacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagact 15906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 17657014 - 17657068
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||| |||||||    
T  17657014 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccacca 17657068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20138506 - 20138448
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcgg 59  Q
    |||| ||||||||| | |||||||||| |||||||||||||| ||||||||||||||||    
T  20138506 gcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 30236140 - 30236198
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  30236140 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagact 30236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 33967389 - 33967337
Alignment:
Q  18 agtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| | ||| |||| ||||||||||||||||||||||||||||||||||    
T  33967389 agtcaaaaagttggctcctgatctcgaatcaaaagtgatcggcccaccagact 33967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 10552325 - 10552279
Alignment:
Q  24 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||    
T  10552325 agaactgactcccgatctagaatcaaaagcgatcggcccaccagact 10552279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 40531281 - 40531243
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagact 40531243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 35062514 - 35062468
Alignment:
Q  24 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||| |||||| ||||||||||||||||  |||||||||||||||||    
T  35062514 agaactgactctcgatctcgaatcaaaatcgatcggcccaccagact 35062468  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 36796654 - 36796621
Alignment:
Q  33 tcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    ||||||||||||||||||||||||||||| ||||    
T  36796654 tcccgatctcgaatcaaaagtgatcggccaacca 36796621  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 3679515 - 3679471
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgat 56  Q
    ||||||| |||||| |  |||||||||||||||||||||||||||    
T  3679515 aacttgaatcaaagcaccgactcccgatctcgaatcaaaagtgat 3679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 17720727 - 17720786
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    ||||||| |||||||||||| ||||||||||| |||| |||||||| ||| ||| ||||||    
T  17720727 caaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaa 17720786  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 41791276 - 41791328
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccac 64  Q
    |||||||  ||||||| |||||| ||||||||||||||||| ||||| |||||    
T  41791276 aacttgaaccaaagaagtgactctcgatctcgaatcaaaagcgatcgacccac 41791328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 270; Significance: 1e-150; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 46692820 - 46693216
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  46692820 gcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctctcgc 46692919  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||| ||||     ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||| |||||||    
T  46692920 ccccggtacaccagagaaaaatcaaa-----tcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccga 46693014  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||  ||||||    
T  46693015 aaactagcacacaatatgtaagacaaaagacatggcatgtgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacataacacacaccct 46693114  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  46693115 ccaaactccgtaaacacctaaaacacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaatca 46693214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 31585761 - 31586158
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| |    
T  31585761 gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcac 31585860  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    || ||||| |||||||||||||     ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||| |    
T  31585861 cctcagtacaccagagaaaaac-----caaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccaa 31585955  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||| |||||||    
T  31585956 aaatcagcaaacactatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacataacgtgacacgcaccct 31586055  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcac-aaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatc 399  Q
     ||||||| ||||||||||||||||||| |||||||| |||||||||| |||||||||||||||| |||| |||||| |||||| ||||||||| |||||    
T  31586056 ccaaactctgtaaacacctaaaccacccaaaaagcacaaaacaagagccagtgacgacgaacatggacccgtgtaacagaggtttcttctaaaggaaatc 31586155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 30685905 - 30686301
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| | |||||||| |||||    
T  30685905 gcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccctcgc 30686004  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||  ||| |||||||||||||     ||||||||||||||||| |||||||  |||||| ||||||||||  ||||||||||||||||||| |||||||    
T  30686005 cccaggtacaccagagaaaaac-----caaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccga 30686099  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||| ||||||||||||||||||||||||| || | ||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||| | |||||    
T  30686100 aaaccaacacacaatatgtaagacgaaagacaaggtaagcgaagtttaaacaacaaacagatcaaaaggaaaaggctcaacacaacgtgacacgaaccct 30686199  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || | |||||| || | ||||||||||| ||||||    
T  30686200 ccaaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctagtgacaacgaacatggactcgtgtaacagatgctgcttctaaaggaaatca 30686299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 24449936 - 24450329
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||| || ||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| | | |||||||| |||||||||     
T  24449936 aaaaccaacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcccccg 24450035  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| |||||||||||||||||||||     ||||||||||||||||| ||||||||||||||||||  ||||||||||||||| ||| ||| ||||||||    
T  24450036 gtacaccagagaaaaaccaaaccaa-----gtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaacc 24450130  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaa 305  Q
    | |||| |||||||||||||||||||||||| |||||||||| || |||||||||||| ||| || |||  |||||||| ||||||| ||||||  ||||    
T  24450131 aacacataatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatccaaaggacaagactcaacacagcgtgacacgcaccccccaaa 24450230  T
Q  306 ctccgtaaacacctaaaccaccc--gaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    |||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||||||||||| ||||||||    
T  24450231 ctccgtaaacacctaaaccacccaaaaaaagcacaaacaagagctagagacgacgaacatggacccatttaacaaaggttgcttctaaaggaaatcacc 24450329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 20113527 - 20113918
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||| ||| |||||| ||| ||||||||| ||||||||| |||||| |||| |||||||||  |||||||| | |||||||| |||||||||     
T  20113527 aaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgcccccg 20113626  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||| |||||||||||||||| ||| |     |||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||     
T  20113627 gtacacccgagaaaaaccaaaccatatcta-----acaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaact 20113721  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaa 305  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||  |||| | ||||||||| ||||||| ||||    
T  20113722 agcacacaatatgtaagatgaaagacatggcatgcaaagtttaaacaacaaacaaatcaaaaggaaaagcctcaatataacgtgacacgcacccttcaaa 20113821  T
Q  306 ctccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    || | ||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||  ||||||||||||||| ||||||||    
T  20113822 cttcttaagcacctaatccacccaaaaagcacaaacaagagctagagacgacgaacatgaacccgtgtaacataggttgcttctaaaggaaatcacc 20113918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 41920532 - 41920234
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||||| |||||    
T  41920532 gcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctcgc 41920433  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    ||| |||| |||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  41920432 ccc-agtacaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccga 41920339  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  41920338 aaactagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccct 41920239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 24684479 - 24684873
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||| ||||||||||| ||||  |||||||||||| ||||||||||||||||||||||| ||| | |||||| |||||||||| |||||    
T  24684479 gcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctcgc 24684578  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||      ||||||||||||||||||||||| || ||||||||||||||||||  |||||||||||||||  || |||||||    
T  24684579 ccccggtacaccagagaaaa------ccaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattgg-ccaccga 24684671  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| || ||||||| ||| ||||| | ||||  ||||||    
T  24684672 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacagacaaatcacaaggaaaaggctcatcacaaagggacacacaccct 24684771  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     |||||| |||| || |||||||||||| ||| ||||||||||||||||||||||| ||||| | |||||||||||  |||||||||| |||| | ||||    
T  24684772 ccaaacttcgtagactcctaaaccacccaaaaggcacaaacaagagctagtgacgatgaacaaggacccatgtaacataggttgcttccaaaggacatca 24684871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 5389422 - 5389726
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |  ||||||| |||||    
T  5389422 gcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgc 5389521  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||| ||||     ||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||| |||| ||    
T  5389522 ccccggtacaccagagaaaaatcaaa-----tcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactga 5389616  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||||  || |||||||    
T  5389617 aaaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggcttaacacaacgttgcaagcaccct 5389716  T
Q  301 acaaactccg 310  Q
     |||||||||    
T  5389717 ccaaactccg 5389726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 7857728 - 7857515
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | |||||||| ||||||||||    
T  7857728 aaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgccccca 7857629  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||||| ||      || ||||||||||||| | ||||||||||||| || ||||||||  ||||||| |||  || ||| |||| | |||||    
T  7857628 gtacaccagagaacaa------catatcaagtcaaacata-attgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaacc 7857536  T
Q  206 agcacacaatatgtaagacga 226  Q
    |||||||||||||||||||||    
T  7857535 agcacacaatatgtaagacga 7857515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5459241 - 5459138
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| |||||    
T  5459241 gcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccctcgc 5459142  T
Q  101 cccc 104  Q
    ||||    
T  5459141 cccc 5459138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 24659009 - 24658629
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| || ||||||  |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||  | |||||||| || ||    
T  24659009 gcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttgc 24658910  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    ||||  || ||||||||      | |||| |||||||||||| | ||||||| |||||| || ||||||||  | ||||| |||  |||||| ||||||     
T  24658909 ccccgatacaccagaga------acaccatatcaagtcaaac-atgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccgg 24658817  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcga--agtttgaacaacaaacaaatcaaaaagaaaaggttca--acacaacgtgacatgca 296  Q
    |  ||||||||||| ||||||||||| |||||||  ||||||   ||   || ||||||| | ||| || ||||||| | |  |||||||| ||||  ||    
T  24658816 actccagcacacaaaatgtaagacgatagacatgatatgcgattggtccaaaaaacaaactagtcacaaggaaaaggcttaacacacaacgggacacaca 24658717  T
Q  297 ccctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaa-catgtacccatgtaaccgaggttg 384  Q
    |||| ||||| || |||||| |||||| |||| |||||| | ||||||||| |||||||||||| |||| ||| ||| ||| |||||||    
T  24658716 ccctccaaacaccctaaacatctaaacaaccc-aaaagcgccaacaagagcaagtgacgacgaatcatggacctatgaaacagaggttg 24658629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 6 - 369
Target Start/End: Original strand, 46814473 - 46814830
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | |||||||| || ||||||     
T  46814473 aaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccg 46814572  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||||      | |||| |||||||||||| | |||||||||||||| || |||| |||  ||||| | |||  |||||| ||| || | |||    
T  46814573 gtacaccagaga------acaccatatcaagtcaaac-aggattgcaactagacaccaactctcgatctcgaatcaaaaataaccggcccatcggacacc 46814665  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcga--agtttgaacaacaaacaaatcaaaaagaaaaggttcaa-cacaacgtgacatgcaccctac 302  Q
    |||| |||| || ||||| |  |||||||  ||| ||   ||   |||||||||  | ||| || ||||||| |||| ||||||| |||| ||||||| |    
T  46814666 agcaaacaa-atataagatggtagacatgatatgtgattggtgcaaacaacaaaatagtcacaaggaaaaggctcaaccacaacgggacacgcaccctcc 46814764  T
Q  303 aaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtaccc 369  Q
    |||| || ||||||||||||| |||| |||||| | ||||||||| ||||||||| |||||| ||||    
T  46814765 aaacaccctaaacacctaaacaaccc-aaaagcgccaacaagagcaagtgacgacaaacatggaccc 46814830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 32864573 - 32864791
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    ||||||||||||||||  |||| |||||||||||| ||||||||| |||||||||| || ||| ||||||| || |||||||| ||| ||| |||||||     
T  32864573 aacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctcaccctcagtagat 32864672  T
Q  112 cagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccacc-gaaaaccagcac 210  Q
    |||| ||     | ||||||| ||| ||||  ||||||| | |||||| |||||||| ||  ||||||| |||  |||||| ||||| |||||| |||||    
T  32864673 cagataa-----acaccaaataaagccaaaacaagattgtagctagacaccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaactagcac 32864767  T
Q  211 acaatatgtaagacgaaagacatg 234  Q
    |||| | ||| ||| |||||||||    
T  32864768 acaaaacgtatgacaaaagacatg 32864791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 27031846 - 27031958
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||  | |||||||| ||  |||||     
T  27031846 aaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccg 27031945  T
Q  106 gtagaccagagaa 118  Q
    ||| |||||||||    
T  27031946 gtacaccagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 17033655 - 17033585
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  17033655 aacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaat 17033585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19598705 - 19598647
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  19598705 aacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact 19598647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 6583237 - 6583298
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  6583237 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaat 6583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 338 - 402
Target Start/End: Complemental strand, 41920228 - 41920164
Alignment:
Q  338 aaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    ||||||||||||||||||||||||||| |||| |||||  |||||||||||||||| ||||||||    
T  41920228 aaacaagagctagtgacgacgaacatggacccgtgtaatagaggttgcttctaaaggaaatcacc 41920164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 9313310 - 9313371
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||    
T  9313310 caaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaat 9313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 38544759 - 38544808
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38544759 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact 38544808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15840924 - 15840982
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||  || ||||||||||||||||||||||||||||| ||||||||||||    
T  15840924 aacttgaatcaagaaactgactcccgatctcgaatcaaaagtgatcagcccaccagact 15840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 27102260 - 27102210
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggccc 62  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  27102260 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 27102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 4651832 - 4651791
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  4651832 tgactcccgatctcgaatcaaaagtgatcggccccccagact 4651791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 30655612 - 30655571
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  30655612 tgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 16147341 - 16147246
Alignment:
Q  312 aaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcaccacaagc 408  Q
    |||||||| ||| |||| |||| | |||| |||||||||||||||||||||||  ||| |||||| |||| ||| || |||| |||||||| |||||    
T  16147341 aaacaccttaacaacccaaaaa-cgcaaataagagctagtgacgacgaacatgggcccgtgtaacagaggctgcctccaaaggaaatcaccccaagc 16147246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 34774922 - 34774848
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccc 104  Q
    |||||||||||||||| |||||||||||||| |||||||||  ||| |||||||  | |||||||| ||| |||||    
T  34774922 tgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcaccccc 34774848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 22200069 - 22200019
Alignment:
Q  20 tcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||| |||||||| |||||| ||||||||||||||||| ||| ||||||    
T  22200069 tcaaagcattgactctcgatcttgaatcaaaagtgatcggtccatcagact 22200019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27905473 - 27905423
Alignment:
Q  20 tcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| | ||| | ||||||||||||||||||||||| ||||||||||    
T  27905473 tcaaagaactaacttctgatctcgaatcaaaagtgatcggtccaccagact 27905423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 38564950 - 38564912
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagact 38564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 46603452 - 46603402
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagacta 71  Q
    ||||||| |||||| ||||||||||||||||| ||  ||||||||||||||    
T  46603452 caaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagacta 46603402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 369
Target Start/End: Complemental strand, 7857469 - 7857368
Alignment:
Q  269 gaaaaggttcaa-cacaacgtgacatgcaccctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtac 367  Q
    ||||||| |||| ||||||| ||||  | |||| ||||| || |||||||||  || |||| |||  | |||||||||||||||||||||||||||| ||    
T  7857469 gaaaaggatcaaacacaacgggacacactccctccaaacaccctaaacaccttgacaaccccaaagacgcaaacaagagctagtgacgacgaacatggac 7857370  T
Q  368 cc 369  Q
    ||    
T  7857369 cc 7857368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 2877711 - 2877652
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||||||||||||||| | || ||||| |||| |||||||| | |||||||||||||    
T  2877711 aaaaccaacttgagtcaaag-actggctcccaatcttgaatcaaatgcgatcggcccacca 2877652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 42374215 - 42374175
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagac 69  Q
    |||||||||||||| ||||||||| |||||| |||||||||    
T  42374215 tgactcccgatctcaaatcaaaagcgatcggtccaccagac 42374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 260; Significance: 1e-144; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 18593323 - 18592945
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| | |||||||||||||||| | |||||| | |||||    
T  18593323 gcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgc 18593224  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| || ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  18593223 ccccggtacacgagagaaaaaccaaa-----tcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccga 18593129  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  18593128 aaatcagcacacaatatgtaaaacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacataacgtgacatgcaccct 18593029  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttg 384  Q
     |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  18593028 ccaaactccgtaaacacctaaaccacctgaagagcacaaacaagagctagtgacgacgaacatgtacctgtgtaacagaggttg 18592945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 698441 - 698045
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| |||||    
T  698441 gcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctcgc 698342  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||     |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||  |    
T  698341 ccccggtacaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaa 698247  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||||||    
T  698246 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacatatcaaaaagaaaaggctcaacataacgtgacacacaccct 698147  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||   ||||||  |  |||||||||||||||||||    
T  698146 ccaaactccgtaaacacctaaaacacccgaagagcacaaacaagagctagtaacgacgaacatgtacatgtgtaacaaattttgcttctaaagaaaatca 698047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 34378178 - 34377880
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||||  || ||    
T  34378178 gcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttgc 34378079  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| ||||||||||| |||||     ||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||| | |||||    
T  34378078 ccccggtacaccagagaaaacccaaa-----tcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccga 34377984  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||||||||| |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||| ||||||| |||| ||||| |||||  ||||||    
T  34377983 aaaccagcacacgatatataagacgaaagatatggcatacgaagtttaaacaacaaacgaatcaaaaggaaaaggctcaa-acaacatgacacacaccct 34377885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 29087350 - 29087232
Alignment:
Q  284 aacgtgacatgcaccctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggtt 383  Q
    |||| |||| ||| ||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  29087350 aacgggacacgcatcctccaaactccgtaaacacctaaaccacccaaaaaacacaaacaagagctagtgacgacgaacatggacccatgtaacagaggtt 29087251  T
Q  384 gcttctaaagaaaatcacc 402  Q
    ||||| | |||||||||||    
T  29087250 gcttccatagaaaatcacc 29087232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 7 - 203
Target Start/End: Complemental strand, 29087555 - 29087364
Alignment:
Q  7 aaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccag 106  Q
    ||||||| |||| |||||||| ||||||| |||||||||||||||| |||| | |||||||||| ||| |||||| | | || ||||| ||||||||| |    
T  29087555 aaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccctcgcccccgg 29087456  T
Q  107 tagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaa 203  Q
    || | |||||||       |||||| |||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||| ||||||||||    
T  29087455 tacaacagagaa-----ttaccaaaacaagtcaaacaaagattgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 29087364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 7392052 - 7392221
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaa 120  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||  | |||||||| ||| ||| | ||| | |||||||      
T  7392052 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaa-- 7392149  T
Q  121 accaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtcca 196  Q
       | ||||||||||| ||||| ||||||||| |||||| || ||||||||  ||||||| |||  ||||||||||    
T  7392150 ---acaccaaatcaagccaaac-aagattgcagctagacaccaactcccgatctcgaagcaaaagtaaccggtcca 7392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 13954246 - 13954441
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | | |||||| ||| ||  | ||| ||    
T  13954246 aacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctcaccttcggtacac 13954344  T
Q  112 cagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcaca 211  Q
    |||||||     | || |||||||||||||  ||||||||| |||||| |||||||  ||  ||||||| |||  |||||| |||||||||||||||| |    
T  13954345 cagagaa-----acacaaaatcaagtcaaa-taagattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccagcata 13954438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 7195251 - 7195309
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  7195251 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagact 7195309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 33258903 - 33258963
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33258903 caaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaa 33258963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 39184208 - 39184256
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagac 69  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  39184208 caaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 39184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 25992066 - 25992007
Alignment:
Q  22 aaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    |||||| |||||| ||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  25992066 aaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaa 25992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 21402853 - 21402903
Alignment:
Q  16 tgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  21402853 tgagtcaaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 22675336 - 22675394
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| |||||||||||||||||||||||  |||||| ||||||||||    
T  22675336 aacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagact 22675394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 26046270 - 26046321
Alignment:
Q  311 taaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaaca 362  Q
    |||||||||||| ||||| |||| ||||||||||||||||||| ||||||||    
T  26046270 taaacacctaaaacaccccaaaaacacaaacaagagctagtgaagacgaaca 26046321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 8297537 - 8297423
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    |||||||| ||||||| ||||||||||||||||||||||| | ||  ||||||||  || ||| |||||||  | |||||||| ||| ||| | ||| ||    
T  8297537 aacttgagccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccctcggtacac 8297438  T
Q  112 cagagaaaaaccaaa 126  Q
     ||||||| ||||||    
T  8297437 tagagaaacaccaaa 8297423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 26045995 - 26046045
Alignment:
Q  31 actcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    |||||||||||||||||||||||||||||  ||||||||| ||| ||||||    
T  26045995 actcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaa 26046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27713138 - 27713080
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| ||| |||||||||||||||||||  ||||||||||| |||||    
T  27713138 aacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagact 27713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 12046303 - 12046270
Alignment:
Q  33 tcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    ||||||||||||||||||||||||||||||||||    
T  12046303 tcccgatctcgaatcaaaagtgatcggcccacca 12046270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 14302451 - 14302511
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    ||||||| |||||||| |||||||| ||||||||||| | |||||||||| ||| ||||||    
T  14302451 caaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaa 14302511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 17854079 - 17854171
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccc 104  Q
    |||||||  |||| ||||||||||||||||||| ||||||| | ||||||||||| |||  |  |||||||| | |||||||| ||| |||||    
T  17854079 aacttgaaccaaataattgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcaccccc 17854171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 23426402 - 23426355
Alignment:
Q  23 aagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||| |||||||| ||||||||||||||||| |||| ||||||||||    
T  23426402 aagaactgactcccaatctcgaatcaaaagtgttcggtccaccagact 23426355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 31721734 - 31721695
Alignment:
Q  24 agaattgactcccgatctcgaatcaaaagtgatcggccca 63  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  31721734 agaactgactcccgatctcgaatcaaaagcgatcggccca 31721695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 8730977 - 8730928
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| |||||||||||||||||| ||||| ||| || ||||||||||    
T  8730977 caaagaactgactcccgatctcgaattaaaagcgataggtccaccagact 8730928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 25341741 - 25341709
Alignment:
Q  38 atctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||| |||||||||||||||||||||||||||    
T  25341741 atctcaaatcaaaagtgatcggcccaccagact 25341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 39024462 - 39024502
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaag 52  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  39024462 aacttgaaccaaagaagtgactcccgatctcgaatcaaaag 39024502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 47325886 - 47326282
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| | | |||||| |||||    
T  47325886 gcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccctcgc 47325985  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||     |||||||||| |||||||||||||  ||||||||||||||||||  ||||||||||||||||||| ||| |||    
T  47325986 ccccggtacaccagagaaaaac-----caaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcga 47326080  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  47326081 aaaccagcacacaatatgtaagaagaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccct 47326180  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||||  ||||||||||||||| ||||||    
T  47326181 ccaaactccgtaaatacctaaaccacccaaaaagcacaaacaagagctagtaacgacgaacatggacccgtgtaacaaaggttgcttctaaaggaaatca 47326280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 38306341 - 38305945
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||    
T  38306341 gcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgc 38306242  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||     ||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||| |||||||    
T  38306241 cccctgtacaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccga 38306147  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||  || |||||||    
T  38306146 aaaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgttgcaagcaccct 38306047  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| ||||||| |||| |||||| |||||||  | ||||| ||||||    
T  38306046 ccaaactccgtaaacatctaaaccacccaaaaagcacaaccaagagctagtgacgatgaacatggacccgtgtaacagaggttgtatttaaaggaaatca 38305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 3419657 - 3420054
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||   |||||||| |||||    
T  3419657 gcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccctcgc 3419756  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||     ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||  | ||||    
T  3419757 ccccggtataccagagaaaaac-----caaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccga 3419851  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacac-aacgtgacatgcaccc 299  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| || ||||||| ||||||||| ||||||    
T  3419852 aaaccagcacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaagggctcaacacaaacgtgacacgcaccc 3419951  T
Q  300 tacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatc 399  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||| ||||||||||    
T  3419952 tccaaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctagtgacaacgaacatggacccgtgtaacagaggttgcttccaaagaaaatc 3420051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 6 - 402
Target Start/End: Complemental strand, 10244257 - 10243871
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||| |||||     
T  10244257 aaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctctcccccg 10244158  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||||||||||||| | |      |||||||||||||||||||||| ||||||||||||  ||||||||||||||||| | | ||||||||||    
T  10244157 gtacaccagagaaaaaccaaatcta------tcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaaaacc 10244064  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaa 305  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||| |||| ||||||||||  ||||||| | ||    
T  10244063 agcacacaatatgtaagacgaaa-acatggcatgcgaagtttgaacaacaaacaaa---aaaagaaaaggctcaaaacaacgtgacccgcaccctcctaa 10243968  T
Q  306 ctccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  10243967 ctccgtaaacacctacaccacccgaaaatcacaaacaagagctagtgacgacgaacatgtacccgtgtaacagaggttgcttctaaaggaaatcacc 10243871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 37795069 - 37794685
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||  |||||||| | |||||||| |||||    
T  37795069 gcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccctcgc 37794970  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| ||||                ||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||| |||||||    
T  37794969 ccccggtacacca----------------aatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccga 37794886  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||||||||||||||||| || |||| |  |||||||||||||||||||||||||||||||||| ||||| | ||||||||| ||||||  ||||||    
T  37794885 aaaccagcacacaatatgtaaaacaaaagtcc-ggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaatgctcaacacaatgtgacacacaccct 37794787  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  | |||| ||||| |||||||||| ||||||    
T  37794786 tcaaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctagtgacgacgaacatggacctgtataacagaggtcgcttctaaaggaaatca 37794687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 25160895 - 25160500
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| | |  |||| |||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||| | |||||||| |||||    
T  25160895 gcccaaaaaccaacttaatttcaagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgc 25160796  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    || | ||| |||||||||||||||||||||     |||||||||| || ||||||||||||||||||||||   | |||||||||||| |   |||||||    
T  25160795 cctcggtacaccagagaaaaaccaaaccaa-----gtcaaacaaaaatagcaactagaccccgactcccgatcccaaagccaaatgaatcatcccaccga 25160701  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||| |||||||||||   |||||    
T  25160700 aaaccagtacacaatatgtaagacaaaagacatggcatgcgtagtttaaacaacaaacaaatcaaaaggaataggttcaa-acaacgtgacaccgaccct 25160602  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||| | ||| ||||||    
T  25160601 ccaaactctgtaaacacctaaaccatccaaaaagcacaaacaagagctagtgacgacgaacatggacccgtgtaacataggttgctttttaaggaaatca 25160502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 5860289 - 5860564
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| | |||||||| |||||    
T  5860289 gcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccctcgc 5860388  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |  ||||||||||||||     |  || |||||||||||||||  |||||| ||||||||||  ||||||||||||||||||| ||| |||    
T  5860389 ccccggtacagtagagaaaaaccaaa-----ttcagccaaacaaagattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcga 5860483  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaac 281  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| || ||||||||||    
T  5860484 aaaccagcacacaatatgtaagacgaaagacatggcgagcgaagtttaaacaacaaacaaatcaaaaggagaaggttcaac 5860564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 7 - 402
Target Start/End: Complemental strand, 33435183 - 33434792
Alignment:
Q  7 aaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccag 106  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||   |||||||| ||||||||| |    
T  33435183 aaacgaacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccgg 33435084  T
Q  107 tagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacca 206  Q
    || |||||||||||      ||||||||||  ||||||||||| ||||||||||| |||| ||||  ||||||| |||  || ||| |||||| ||||||    
T  33435083 tacaccagagaaaa------ccaaatcaagctaaacaaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaacca 33434990  T
Q  207 gcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaac 306  Q
     |||||||||||||| ||||| |||||||||||| |||||| |||||| |||  ||| ||| ||||||| || |||||||| |||  || |||| |||||    
T  33434989 acacacaatatgtaatacgaatgacatggcatgcaaagtttaaacaaccaacctatcgaaaggaaaaggctcgacacaacgggacccgctccctccaaac 33434890  T
Q  307 tccgtaaacacctaaaccaccc-gaaaagcac-aaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
     || |||| |||||||||||||  |||||||| ||||| ||||||||||||||||||||  ||||  ||||| |||||||| |  |||| ||||||||    
T  33434889 accctaaatacctaaaccacccaaaaaagcacaaaacaggagctagtgacgacgaacatagacccgagtaacagaggttgccttcaaaggaaatcacc 33434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 3867196 - 3866922
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| | | ||| |||||||| | ||| ||||  ||||    
T  3867196 gcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccacccttcgc 3867097  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    || | ||| ||||||||||||||| |     ||||||||||||||||||| | |||||||||||||| |||  ||||||| |||  || ||  |||||||    
T  3867096 cctcggtacaccagagaaaaaccata-----tcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccaccga 3867002  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaac 281  Q
    || |||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||| ||||||| |||||    
T  3867001 aa-ccaggacacaatatgtaagacgaaagacgtggcatgtgaagtttaaacaacaaataaatcaaaaggaaaaggctcaac 3866922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 41089754 - 41089910
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||||| |||||||||| ||| |||||||| | || ||||| |||||||||     
T  41089754 aaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccccg 41089853  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactc 167  Q
     || |||||||||     ||||||||||||||||||||||||||| | ||||||||| ||||    
T  41089854 atacaccagagaa-----aaaccaaatcaagtcaaacaaagattgtagctagaccccaactc 41089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 35745828 - 35746031
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||| ||||||  ||||| ||||||||||||||||||||||| ||||| |||||| ||| || ||||| |||||||||| |||||    
T  35745828 gcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctcgc 35745927  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| | ||||||      | |||| |||||||||||| ||||||||  |||| | || ||| ||||  ||||||| |||  ||||||||||||||    
T  35745928 ccccggtacatcagaga------acaccatatcaagtcaaac-aagattgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccga 35746020  T
Q  201 aaaccagcaca 211  Q
    |||||| ||||    
T  35746021 aaaccaacaca 35746031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 34390042 - 34389815
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||| ||  |||||||  | |||||||  ||| |    
T  34390042 gcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcac 34389943  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||||||| ||||||||      | |||| |||||||||||  | |||||||||||||| || ||| | ||  ||||||| |||  ||| || ||| |      
T  34389942 ccccagtacaccagaga------acaccatatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcag 34389849  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatg 234  Q
    | |||||||||||||||||| ||||| |||||||    
T  34389848 acaccagcacacaatatgtacgacgatagacatg 34389815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6584989 - 6584889
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | |||||||| |||||    
T  6584989 gcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgc 6584890  T
Q  101 c 101  Q
    |    
T  6584889 c 6584889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 42533264 - 42533356
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccc 104  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||  | |||||||| ||| |||||    
T  42533264 aacttaagccaaaggattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcaccccc 42533356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 13311908 - 13311849
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagacta 71  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacta 13311849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 6716748 - 6716806
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagact 6716806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 9349806 - 9349760
Alignment:
Q  24 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9349806 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 9349760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 24324810 - 24324864
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  24324810 aacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccacca 24324864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 3478419 - 3478352
Alignment:
Q  14 cttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  3478419 cttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaa 3478352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 38485608 - 38485567
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38485608 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 38485567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 362
Target Start/End: Complemental strand, 8745222 - 8744877
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    |||||||  ||| ||| ||| |||||||||||||||||||||||||||||||||||| | ||| |||||||  | ||| |||| ||| ||| | ||  ||    
T  8745222 aacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcac 8745123  T
Q  112 cagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcaca 211  Q
    |||||||     | |||| ||||   ||||| || |||||| |||||| ||| || ||||  ||||||| |||  |||||| ||||||||||||||||||    
T  8745122 cagagaa-----acaccagatcacaccaaac-aacattgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcaca 8745029  T
Q  212 caatatgtaagacgaaagacatggcatgc-gaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaactccg 310  Q
    ||| | | | ||| || ||||||  |||| |  ||   ||||||||| | ||||||| || |||| ||||| ||||  |||  ||  ||| |||||  ||    
T  8745028 caaaaagcatgacaaacgacatgatatgcggtggtgcaaacaacaaatagatcaaaaggagaaggctcaactcaacaagactcgcttcctccaaacatcg 8744929  T
Q  311 taaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaaca 362  Q
    ||||||||| ||| |||  |||| | |||||||| |||||||||||||||||    
T  8744928 taaacaccttaacaaccgaaaaaacgcaaacaagggctagtgacgacgaaca 8744877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 16828948 - 16829039
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccc 103  Q
    |||||||||||||||| |||||  |||||||||| ||||||||||| ||| |||||||| ||| |||||||  | |||||||| ||| ||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccc 16829039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 42533502 - 42533617
Alignment:
Q  254 caaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtga 353  Q
    |||||||||||||| ||||||| |||  |||||| |||| ||  ||| ||| | || ||||||||| ||| |||| |||| ||||||||||||| | |||    
T  42533502 caaacaaatcaaaaggaaaaggctcagaacaacgggacacgcttcctccaaccaccttaaacaccttaacaacccaaaaatcacaaacaagagccaatga 42533601  T
Q  354 cgacgaacatgtaccc 369  Q
    ||||||||||| ||||    
T  42533602 cgacgaacatggaccc 42533617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 1320863 - 1320805
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| ||||| ||||| | ||||||||||||||||||||||||||||    
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagact 1320805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 11379139 - 11379221
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacc 94  Q
    |||||||  ||||| | |||||||||||||||||||||||| ||||||| |||||||||| |  |||||||| | ||||||||    
T  11379139 aacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcacc 11379221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 12480955 - 12480901
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||  ||||||| |||||||||||||||||||||||| |||||||||||||    
T  12480955 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 16954722 - 16954652
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||||||||||| |||||  |||||||||| ||||||||||||| | |||||||| ||| |||||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaat 16954652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44353565 - 44353623
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcgg 59  Q
    |||| ||||||||| | |||||||||| |||||||||||||| ||||||||||||||||    
T  44353565 gcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 228
Target Start/End: Complemental strand, 44755663 - 44755486
Alignment:
Q  44 aatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaaccaaatcaagtcaaaca 143  Q
    ||||||||||||||||||||||||||| ||| |||||||  | |||||||| |||  || | ||| |||||||||     | ||||||||| ||||||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctc-accacggtacaccagagaa-----acaccaaatcacgtcaaaca 44755570  T
Q  144 aagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaatatgtaagacgaaa 228  Q
    || || ||| |||||| |||||||||||  || |||| |||| ||  || ||||||  ||||||||||||| | ||| |||||||    
T  44755569 aa-atagcagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaaaaagtatgacgaaa 44755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 1820014 - 1820072
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||| ||||||||| ||||||||||||||  |||||| ||||||||||    
T  1820014 aacttgaatcaaagatttgactccctatctcgaatcaaaatcgatcggtccaccagact 1820072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 9428128 - 9428186
Alignment:
Q  23 aagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaa 81  Q
    ||||| ||||| | |||||||||||||||||||||||| |||||||||| || ||||||    
T  9428128 aagaactgacttctgatctcgaatcaaaagtgatcggctcaccagactacaggaccaaa 9428186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  35 ccgatctcgaatcaaaagtgatcggcccaccagac 69  Q
    |||||||||||||||||||||||||||||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23983264 - 23983206
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||  || |||||||||||||||||||||||||||  ||||| |||||||||||    
T  23983264 aacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagact 23983206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 27993568 - 27993606
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagact 27993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 35206725 - 35206763
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 46133302 - 46133360
Alignment:
Q  24 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||  ||||||||||    
T  46133302 agaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaat 46133360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 25153265 - 25153231
Alignment:
Q  36 cgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||| ||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagact 25153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 48058666 - 48058724
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| |||| || ||||| |||||||| ||||||||| ||||| |||||||||||    
T  48058666 aacttgagccaaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagact 48058724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 6 - 402
Target Start/End: Complemental strand, 30964516 - 30964125
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| |||| ||||| |||||||| | |||||||| ||||||| |     
T  30964516 aaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgccctcg 30964417  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| |||||||||||||||||     ||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||| ||| ||||||||    
T  30964416 gtacaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaacc 30964322  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaa 305  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  30964321 agcacacaataagtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggttcaacacaacgtgacacgcaccctccaaa 30964222  T
Q  306 ctccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||| ||||| | ||||||    
T  30964221 ctccgcaaacacctaaaccacccaaaaagcacaaacaatagctagtgacgacgaacatggacccgtgtaacagaggttgcttttaaaggatatcacc 30964125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 8255107 - 8254714
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||| ||| |||||||| | |||||||| |||||    
T  8255107 gcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgc 8255008  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||     |||||| ||||||||||| || ||||||| ||||||||||  ||||||||||| ||||||| |||||||    
T  8255007 ccccggtacaccagagaaaaaccaaa-----tcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccga 8254913  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||| ||||||||| | |||| |||||||    
T  8254912 aaaccaacacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcaccct 8254813  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatc 399  Q
     ||||||| ||||||||||||||||||| | || |||||||||||||||||||||||||||||| |||| ||||||  |||||||||| ||||||||||    
T  8254812 tcaaactcggtaaacacctaaaccacccaacaatcacaaacaagagctagtgacgacgaacatggacccgtgtaacaaaggttgcttccaaagaaaatc 8254714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 8268525 - 8268132
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||| ||| |||||||| | |||||||| |||||    
T  8268525 gcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgc 8268426  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||     |||||| ||||||||||| || ||||||| ||||||||||  ||||||||||| ||||||| |||||||    
T  8268425 ccccggtacaccagagaaaaaccaaa-----tcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccga 8268331  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||| ||||||||| | |||| |||||||    
T  8268330 aaaccaacacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcaccct 8268231  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatc 399  Q
     ||||||| ||||||||||||||||||| | || |||||||||||||||||||||||||||||| |||| ||||||  |||||||||| ||||||||||    
T  8268230 tcaaactcggtaaacacctaaaccacccaacaatcacaaacaagagctagtgacgacgaacatggacccgtgtaacaaaggttgcttccaaagaaaatc 8268132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 402
Target Start/End: Complemental strand, 4305800 - 4305409
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||| | |||||||| || ||||||     
T  4305800 aaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcaccgcttgcccccg 4305701  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||||||||| |||     || ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||    
T  4305700 gtacaccagagaaaaacgaaa-----tccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaacc 4305606  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaa 305  Q
    || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||| | ||| ||||||| |||||||||||||||| | ||| | ||||    
T  4305605 agtacacaatatgtaagacaaaagacatggcaagcgaagtttaaacaacaaacaaaactaaaggaaaaggctcaacacaacgtgacacgaaccttccaaa 4305506  T
Q  306 ctccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    | ||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||||    
T  4305505 caccgaaaacacccaaacaacccaaaaagcacaaacaagagctagtgacgacgaacatggatccatgtaacagatattgcttctaaaggaaatcacc 4305409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 38637238 - 38637305
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactata 73  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38637238 aaaacctacttaagccaaagaattgactcccgatctcgaatcaaaagtgatcggcccgccagactata 38637305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 25753241 - 25753171
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  25753241 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaat 25753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 31050697 - 31050871
Alignment:
Q  35 ccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaaccaaatca 134  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||| ||||||||| ||| | || |||      | |||| ||||    
T  31050697 ccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctcgcccccggtacatcaaaga------acaccatatca 31050790  T
Q  135 agtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaata 216  Q
    |||||||| | ||||||| |||| | ||||||||||   ||||||| |||  |||||| |||||| |||||| |||| ||||    
T  31050791 agtcaaac-aggattgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaacacataata 31050871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 171
Target Start/End: Original strand, 30167570 - 30167729
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||  |||||||  ||||||| || |||||||| ||| ||||      
T  30167570 aaaatcaacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccctcaccccg- 30167668  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccga 171  Q
    | | | || |||||| | ||| ||||||||     |||||||||| | ||||||||||||||||||    
T  30167669 gcacatcaaagaaaacctaaatcaaatcaa-----acaaagattgtagctagaccccgactcccga 30167729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 53823433 - 53823546
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||| ||  |||||||  | |||||||| ||| || || ||| ||    
T  53823433 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacac 53823532  T
Q  112 cagagaaaaaccaa 125  Q
    |||||||| |||||    
T  53823533 cagagaaacaccaa 53823546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 22811172 - 22811367
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    |||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| ||  |||||||  | |||||||  ||| |||| | || ||    
T  22811172 aacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccccga-tacac 22811270  T
Q  112 cagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcaca 211  Q
    |||||||     | |||||||||   |||||||| ||||||||||||| || | | ||||  ||||||| |||  |||||  ||||||||||||||||||    
T  22811271 cagagaa-----acaccaaatcacaccaaacaaa-attgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcaca 22811364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 40813797 - 40813851
Alignment:
Q  16 tgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  40813797 tgagtcaaaaaattggctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 39421038 - 39421139
Alignment:
Q  25 gaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaacca 124  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||  | |||||||| ||| ||| ||||| |  ||||||| ||||    
T  39421038 gaattgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacacca 39421137  T
Q  125 aa 126  Q
    ||    
T  39421138 aa 39421139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 21387216 - 21387286
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    ||||||| || ||||| ||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  21387216 aacttgaatcgaagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaat 21387286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 46698797 - 46698867
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||  ||||||| ||||||||||||||||||||||||  ||||||||||||||||| || |||||||    
T  46698797 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaat 46698867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2825863 - 2825746
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||  ||||| ||||||  ||| ||||||||||||||||||| ||||||||||||| |||| ||| |||||||  | || ||||| |||||    
T  2825863 gcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccctcgc 2825764  T
Q  101 ccccagtagaccagagaa 118  Q
    || | ||| |||||||||    
T  2825763 cctcggtacaccagagaa 2825746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 36962626 - 36962685
Alignment:
Q  10 ccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  36962626 ccaacttgagtcaaagact-gactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 39041285 - 39041344
Alignment:
Q  11 caacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||| |  || ||||||| ||||||||||||||||||||||||||||||||||    
T  39041285 caacttgagtctagaaactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 6599957 - 6600015
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||||  ||||||||||||| ||||||||| |||||||||||||||||    
T  6599957 aacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagact 6600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 38929896 - 38929838
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| ||||||  ||||||||||||||||||||||||||| ||||||    
T  38929896 aacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagact 38929838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 49747586 - 49747526
Alignment:
Q  22 aaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||| |||||| ||||||| ||||||||||||||||| ||||||||| ||| |||||||    
T  49747586 aaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaat 49747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 260 - 402
Target Start/End: Complemental strand, 19672928 - 19672786
Alignment:
Q  260 aatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaact-ccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacg 358  Q
    |||||||| ||||||| ||| | ||||| |||| ||||||  |||| | || ||||||||| ||| |||| |||| ||| |||||||||||||| |||||    
T  19672928 aatcaaaaggaaaaggctcatctcaacgagacacgcaccccccaaaattccctaaacaccttaacaacccaaaaa-caccaacaagagctagtggcgacg 19672830  T
Q  359 aacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    |||||| | || |||||| |||| ||| || |||| ||||||||    
T  19672829 aacatggatccgtgtaacggaggatgcctccaaaggaaatcacc 19672786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 53756802 - 53756767
Alignment:
Q  35 ccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagact 53756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 2792286 - 2792344
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||  || ||||| ||||||||||||||||||||||||||| || |||||    
T  2792286 aacttgagtcaagaaactgacttccgatctcgaatcaaaagtgatcggcctactagact 2792344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 2061759 - 2061808
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| |||||| | |||||||||||||||||||| ||||||||||||    
T  2061759 caaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagact 2061808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 16501783 - 16501746
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16501783 tgactcccgatctcgaatcaaaagcgatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 37707392 - 37707425
Alignment:
Q  37 gatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagact 37707425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 26474886 - 26474851
Alignment:
Q  31 actcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||| |||||||||||||||||||||||||||||||    
T  26474886 actctcgatctcgaatcaaaagtgatcggcccacca 26474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 10388610 - 10388572
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  10388610 ctcccgacctcgaatcaaaagtgatcggcccacaagact 10388572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 28966936 - 28966878
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| |||||||| ||||||||||||||  ||||| || ||||||||    
T  28966936 aacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagact 28966878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 35800550 - 35800500
Alignment:
Q  20 tcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||| |||||||||||||||||| ||||||  |||||||||    
T  35800550 tcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagact 35800500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 41117982 - 41118040
Alignment:
Q  15 ttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactata 73  Q
    ||||| ||||||| | ||| |||||||||||||||||||||||  ||| ||||||||||    
T  41117982 ttgagccaaagaacttacttccgatctcgaatcaaaagtgatcttccctccagactata 41118040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 12296098 - 12296061
Alignment:
Q  31 actcccgatctcgaatcaaaagtgatcggcccaccaga 68  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  12296098 actcccgatctcgaagcaaaagtaatcggcccaccaga 12296061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 19311372 - 19311412
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  19311372 tgactcccg-tctcgaatcaaaagtgatcgacccaccagact 19311412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 48098385 - 48098288
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaa 126  Q
    ||||||||||||||||| |||||||||| |||||| | | || ||  |||||||  | |||||||||||| ||| | ||| ||| |||||| ||||||    
T  48098385 tgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcggtacacctgagaaacaccaaa 48098288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 17416541 - 17416573
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccac 64  Q
    |||| ||||||||||||||||||||||||||||    
T  17416541 ctcctgatctcgaatcaaaagtgatcggcccac 17416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-131; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 20611863 - 20611467
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||| || ||||| | |||||||| |||||    
T  20611863 gcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcgc 20611764  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||     ||||||||||||||||||||| ||||||||||||||| ||  ||||| ||||||||||||  |||||||    
T  20611763 ccccggtacaccagagaaaaaccaaa-----tcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccga 20611669  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||    
T  20611668 aaaccagcacacaatatgtaagacgaaaaacatagcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccct 20611569  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     |||||| ||||||||||||||| |||| |||||||||||||||||||||| ||||| |||||| |||| |||||| |||||||||||||||| ||||||    
T  20611568 ccaaacttcgtaaacacctaaactacccaaaaagcacaaacaagagctagtaacgacaaacatggacccgtgtaacagaggttgcttctaaaggaaatca 20611469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 34475755 - 34476150
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||| |||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||| |||||    
T  34475755 gcccaaaaatcaacttaattccaagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgc 34475854  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||| ||||||||     |||||||||| |||||| ||||||||||||||||||  ||||||||||||||| ||| ||| |||    
T  34475855 ccccggtacaccagagaaaaatcaaaccaa-----gtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcga 34475949  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||| ||||||| |||| |||||||||||  ||||||    
T  34475950 aaaccagcacacgatatgtaagacaaaagacaaggcatgcgaagtttaaacaacaaacaaatccaaaggaaaaggctcaa-acaacgtgacacccaccct 34476048  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||| ||||||  ||||||||| | ||| ||||||    
T  34476049 ccaaactccgtaaacacctaaaccactcaaaaagcacaaacaagagctagagacgacgaacatggacccgtgtaacataggttgctttttaaggaaatca 34476148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 68 - 402
Target Start/End: Complemental strand, 47235729 - 47235399
Alignment:
Q  68 actatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactc 167  Q
    |||||||  ||||||| | |||||||| ||||||||| ||| ||  |||||||||||||||||     ||||||||||||||||| |||||||| |||||    
T  47235729 actatagtcccaaattagcagggcacccctcgcccccggtacactggagaaaaaccaaaccaa-----gtcaaacaaagattgcagctagaccctgactc 47235635  T
Q  168 ccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaa 267  Q
    ||||  ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  47235634 ccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacattatgtaagacgaaagacatggcgtgcgaagtttaaacaacaaacaaatcaaaa 47235535  T
Q  268 agaaaaggttcaacacaacgtgacatgcaccctacaaactccgtaaacacctaaaccaccc-gaaaagcacaaacaagagctagtgacgacgaacatgta 366  Q
     ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||| ||||| ||||||| |    
T  47235534 ggaaaaggctcaacacaacgtgacacgcaccctccaaactccgtaaacacctaaaccacccaaaaaaacacaaacaagagctagagacgatgaacatgga 47235435  T
Q  367 cccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    ||| ||||||  ||||||||||||||| ||||||||    
T  47235434 cccgtgtaacaaaggttgcttctaaaggaaatcacc 47235399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 19176582 - 19176187
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||||| ||| |    
T  19176582 gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcacc-ctcac 19176484  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
     ||| ||| | |||||||||||||||     | ||||||||||||||||||| ||||||||||||||| ||  ||||||||||| ||||| | |||||||    
T  19176483 tcccggtacatcagagaaaaaccaaa-----ttaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccga 19176389  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||| | |||||||||||||| || ||||| | || |||||| | ||||  | ||||    
T  19176388 aaaccagcacacaataagtaagaggaaagacatggcatgtgaagtttaaccaacaaacaaatcacaaggaaaaagctccacacaaagggacacactccct 19176289  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     |||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||   |||| ||||||  ||||| |||| |||| ||||||    
T  19176288 ccaaactccgtaaacacctaaaccatccaaaaggcacaaacaagagctagtgacgatgaacaaagacccgtgtaacaaaggttacttccaaaggaaatca 19176189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 2394259 - 2394655
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||| || ||||||| ||||| || |||||||||||||||||||||| ||||||| |||||| |||||||| | |||||||| |||||||||     
T  2394259 aaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcccccg 2394358  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||| |||||||||||||     ||||||||||||||||| ||||||||||||||||||  | ||||||||||||||||  ||| ||||||||    
T  2394359 gtacaccagagtaaaaccaaaccaa-----gtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaacc 2394453  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgaca----tgcacccta 301  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| || |||  ||| |||| |||||||      | |||      
T  2394454 agcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactcaccacagcgtgacaccccccccccccc 2394553  T
Q  302 caaactccgtaaacacctaaaccacc-cgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||| ||| |||||| || ||| |||||||||||  ||||||||||| ||| ||||||    
T  2394554 caaactccgtaaacacctaaaccaccaagaaaagcataaacaagagttagagacgacaaatatggacccatgtaacaaaggttgcttcttaaggaaatca 2394653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 45163935 - 45163532
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacc--agactatagcaccaaattggtagggcacctctc 98  Q
    |||| ||||||||||| || |||| || ||||| | ||||||||||||||||||||||||||||   ||||||||| |||||||| | |||||||| |||    
T  45163935 gcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcacccctc 45163836  T
Q  99 gcccccagtaga----ccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtc 194  Q
    |||| | ||| |    | ||||||||| ||||||||     ||||||||||||||||| ||||||||||||| ||||  | ||||||||||||||||| |    
T  45163835 gccctcggtacatgcactagagaaaaatcaaaccaa-----gtcaaacaaagattgcagctagaccccgacttccgatcttgaagccaaatgaaccggcc 45163741  T
Q  195 caccgaaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatg 294  Q
     | | ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| || |||  |||||||| ||||||  |    
T  45163740 tatcaaaaaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaataaaaaggacaagactcaacacagcgtgacgcg 45163641  T
Q  295 caccctacaaactccgtaaacacctaaaccaccc-gaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaag 393  Q
    || ||   |||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||| ||||||  || ||||||||||||    
T  45163640 caacccctaaactcggtaaacacctaaaccacccagaaaagcacaaacaagagttagagacgacgaacatggacccgtgtaacaaagattgcttctaaag 45163541  T
Q  394 aaaatcacc 402  Q
     ||||||||    
T  45163540 gaaatcacc 45163532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 2392507 - 2392768
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| || ||||||| ||||| || |||||||||||||||||||||| ||||||| |||||| |||||||| | |||||||| |||||    
T  2392507 gcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgc 2392606  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| ||||||| |||||||||||||     ||||||||||||||||| ||||||||||||||||||  | ||||||||||||||||  ||| |||    
T  2392607 ccccggtacaccagagtaaaaccaaaccaa-----gtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcga 2392701  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaa 267  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  2392702 aaaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaa 2392768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 40023573 - 40023924
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||||||||| ||  || ||||  | |||||||| |||||    
T  40023573 gcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggcacc-ctcgc 40023671  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| || |||||      | |||| |||||||||||  | ||||||| |||||| || ||| ||||  ||||||| |||  |||||||||||||     
T  40023672 ccccggtacactagaga------acaccatatcaagtcaaaacatgattgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccgg 40023765  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcga--agtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcacc 298  Q
    | ||||  |||||||||||||||||| |||||||   |||||   ||   |||||||| ||||  |||| ||||||| ||| ||||||| |||| |||||    
T  40023766 acaccaatacacaatatgtaagacgatagacatgatgtgcgattggtgcaaacaacaagcaaa--aaaaggaaaaggctcatcacaacg-gacacgcacc 40023862  T
Q  299 ctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaaca 362  Q
    || ||||| || ||||||||| ||| |||| | ||  | |||| ||||||||||| ||||||||    
T  40023863 ctccaaacaccttaaacaccttaacaacccaacaa--aaaaacgagagctagtgaggacgaaca 40023924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 23328356 - 23328567
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    |||||||||||||| |||| |  | ||||||||||||||||||||||||||||| |||||| ||| ||| |||||||    |||||||| |||||||||     
T  23328356 aaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccccg 23328455  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||||      | |||| ||||||||||||||| |||||| |||||| || ||||||||  ||||||| |||  |||||| ||| || | |||    
T  23328456 gtacaccagaga------acaccatatcaagtcaaacaaa-attgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggacacc 23328546  T
Q  206 agcacacaatatgtaagacga 226  Q
    |||||||||||||||||||||    
T  23328547 agcacacaatatgtaagacga 23328567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17551037 - 17550965
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactata 73  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17551037 gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactata 17550965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 43012450 - 43012373
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaatt 83  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  43012450 aaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaatt 43012373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9584054 - 9584147
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacc 94  Q
    |||| ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||  |||||||||| ||| | |||||| | ||||||||    
T  9584054 gcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcacc 9584147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 14755286 - 14755342
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcac 77  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14755286 caaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcac 14755342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 31482942 - 31482875
Alignment:
Q  23 aagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtaggg 90  Q
    |||| |||| ||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||    
T  31482942 aagatttgattcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtaggg 31482875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 47945775 - 47945717
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  47945775 aacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggact 47945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45398876 - 45398807
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||| ||||||||||| | |||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  45398876 gcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagact 45398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 14879486 - 14879446
Alignment:
Q  30 gactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14879486 gactcccgatctcgaatcaaaagtgatcggcccaccagact 14879446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 5556639 - 5556580
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagacta 71  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  5556639 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagacta 5556580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 30127332 - 30127273
Alignment:
Q  12 aacttgagtcaa-agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||||||    
T  30127332 aacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 14194009 - 14193939
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||| |||||||  ||||||| |||||||||||||||||||||| || ||||||| ||| |||||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaat 14193939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 20710740 - 20710778
Alignment:
Q  32 ctcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagact 20710778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 33143970 - 33144019
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  33143970 caaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagact 33144019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 37123442 - 37123397
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  37123442 caaagaactgactcccaatctcgaatcaaaagtgatcggcccacca 37123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 39021297 - 39021342
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  39021297 caaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 25647734 - 25647639
Alignment:
Q  31 actcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaa 126  Q
    |||||||||||||||||||||||||| |||||  |||||| ||| |||||||  | ||||||||  || | ||| ||| |||||||||| ||||||    
T  25647734 actcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtacaccagagaaacaccaaa 25647639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 24099360 - 24099397
Alignment:
Q  33 tcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  24099360 tcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 31424304 - 31424247
Alignment:
Q  13 acttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||| |||||| | |||||||||||||||||||||||| || ||||| ||||||||    
T  31424304 acttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagact 31424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 1652898 - 1652950
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccac 64  Q
    |||||||  ||||||| | ||||| ||||||||||||||||||||||||||||    
T  1652898 aacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccac 1652950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 823447 - 823498
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggccca 63  Q
    ||||||| | ||| || |||||| ||||||||||||||||||||||||||||    
T  823447 aacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggccca 823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 4464073 - 4464132
Alignment:
Q  144 aagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaa 203  Q
    |||||||||||||||| |||||||||||  ||||||| |||  |||||| ||||||||||    
T  4464073 aagattgcaactagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaa 4464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 2782081 - 2782139
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||| ||||||| || || ||||||||||  ||||||||||||||| |||||||||||    
T  2782081 aactttagtcaaaaaactggctcccgatctaaaatcaaaagtgatcgtcccaccagact 2782139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 19295877 - 19295935
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||  || | ||| ||||| |||||||||||||||| |||||||||||||    
T  19295877 aacttgagtcaagaaactaacttccgatatcgaatcaaaagtgataggcccaccagact 19295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47235778 - 47235729
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaa 50  Q
    |||| ||||||||||| ||||||||||  ||||| |||||||||||||||    
T  47235778 gcccaaaaaccaacttaagtcaaagaaccgactctcgatctcgaatcaaa 47235729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 37123146 - 37123114
Alignment:
Q  330 aaaagcacaaacaagagctagtgacgacgaaca 362  Q
    |||| ||||||||||||||||||||||||||||    
T  37123146 aaaaacacaaacaagagctagtgacgacgaaca 37123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 233; Significance: 1e-128; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 35773 - 36169
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||| |   |||||| |||||    
T  35773 gcccaaaaaccaacttaagtcaaagaat-gactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccctcgc 35871  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| ||| |||||||||||||||||    || ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||    
T  35872 ccccggtacaccagagaaaaaccaaa----attaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaaccggcccaccga 35967  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||  ||||||    
T  35968 aagccagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacactcaccct 36067  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatca 400  Q
     ||||||| ||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||| |||| || |||  ||||||||||||||| ||||||    
T  36068 tcaaactctgtaaacacctaaaccacccaaaaggcataaacaagagctagagacgacggacatggacccttgaaacataggttgcttctaaaggaaatca 36167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 215; Significance: 1e-117; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 3117573 - 3117219
Alignment:
Q  1 gcccgaaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgc 100  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| || |||||| | |||||||| |||||    
T  3117573 gcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccctcgc 3117474  T
Q  101 ccccagtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccga 200  Q
    |||| | | ||||||||||||||||| ||| ||||    |||||||||||||||||||||||||||||| |  ||||||||||||||||||| |||| ||    
T  3117473 ccccggaacaccagagaaaaaccaaatcaagtcaa----aacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactga 3117378  T
Q  201 aaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccct 300  Q
    |||||| |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||| | ||||||||| ||||||  ||||||    
T  3117377 aaaccaacacacaatatgtaagatgaaagacatggcatgcaaagattgaacaacaaacaaat-aaaaagaaaaagctcaacacaatgtgacacacaccct 3117279  T
Q  301 acaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaa 360  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3117278 ccaaactccataaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaa 3117219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 16510307 - 16510690
Alignment:
Q  6 aaaaccaacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgccccca 105  Q
    ||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||||| ||||| ||| |||||||| | |||||||| || |||| |     
T  16510307 aaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccctcg 16510406  T
Q  106 gtagaccagagaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaacc 205  Q
    ||| ||||||||||||||| |     ||||||||||||||||||||| ||||||||||||||||||  ||||||| |||  |||||| ||| ||||||||    
T  16510407 gtacaccagagaaaaaccata-----tcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggcccaacgaaaacc 16510501  T
Q  206 agcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggttcaacacaacgtgacatgcaccctacaaa 305  Q
    |        |||||||||| ||||||||||||||||||||   ||||||||||||||||||| ||||||| |||||||||||  ||| ||||||| ||||    
T  16510502 at-------tatgtaagacaaaagacatggcatgcgaagtaa-aacaacaaacaaatcaaaaggaaaaggctcaacacaacggaacacgcaccctccaaa 16510593  T
Q  306 ctccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaacatgtacccatgtaaccgaggttgcttctaaagaaaatcacc 402  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||  |||||| | || |||| ||||||||    
T  16510594 ctccataaacacctaaaccacccgaaaagcagaaacaagagctagtgacgacgaacatggacccgtgtaagagaggtttcctccaaaggaaatcacc 16510690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 20701815 - 20701929
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagac 111  Q
    ||||| || ||||||| | |||||||||||||||||||||||||||||| |||||| ||| |  |||||||  | |||||||| ||| ||||| ||| ||    
T  20701815 aacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacac 20701914  T
Q  112 cagagaaaaaccaaa 126  Q
    |||||||||||||||    
T  20701915 cagagaaaaaccaaa 20701929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 32935351 - 32935409
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  32935351 aacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact 32935409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 26216042 - 26216089
Alignment:
Q  23 aagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 26216089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 3880623 - 3880709
Alignment:
Q  40 ctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccagagaaaaaccaaa 126  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||  | |||||||||||| ||| | ||| |||||||||| ||||||    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaa 3880709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 9224101 - 9224042
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaa 80  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||| ||| |||||    
T  9224101 caaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaa 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 26534742 - 26534789
Alignment:
Q  23 aagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagact 26534789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 34105479 - 34105428
Alignment:
Q  15 ttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacca 66  Q
    |||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  34105479 ttgagtcaagaaactgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 34092864 - 34092806
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||| |||||||||    
T  34092864 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 34092806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 21266163 - 21266112
Alignment:
Q  31 actcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  21266163 actcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaat 21266112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 15132643 - 15132732
Alignment:
Q  126 accaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaata 216  Q
    |||| |||||||||||||  ||||||| |||| | |||||||||||  ||||||| |||  |||||| ||||||||||||| |||||||||    
T  15132643 accatatcaagtcaaacag-gattgcagctagtcaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaata 15132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 13423535 - 13423482
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccacc 65  Q
    |||||||| |||||||  ||||| |||||||||||||||||||||||| |||||    
T  13423535 aacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 34090415 - 34090374
Alignment:
Q  29 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  34090415 tgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 7546464 - 7546499
Alignment:
Q  35 ccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagact 7546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 12794173 - 12794114
Alignment:
Q  23 aagaattgactcccgatctcgaatcaaaag-tgatcggcccaccagactatagcaccaaa 81  Q
    ||||| ||||||| |||||||||||||||| |||||||||||| ||||| ||| ||||||    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaa 12794114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 33968625 - 33968684
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagacta 71  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||  ||||| ||||||    
T  33968625 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagacta 33968684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 12129264 - 12129228
Alignment:
Q  34 cccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  12129264 cccgatctcgaatcaaaagtgatcggaccatcagact 12129228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 32316437 - 32316393
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgat 56  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||    
T  32316437 aacttgaatcaaagaacttactaccgatctcgaatcaaaagtgat 32316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 36773 - 36580
Alignment:
Q  15 ttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggtagggcacctctcgcccccagtagaccag 114  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||  | |||||||| ||| | | | ||| |||||    
T  36773 ttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccag 36674  T
Q  115 agaaaaaccaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgaggtcgaagccaaatgaaccggtccaccgaaaaccagcacacaa 214  Q
    ||||     | ||||||||| | |||||||| |||||| |||||| |||||||| ||  ||||| | |||| || ||| |||||| |||||| |||||||    
T  36673 agaa-----acaccaaatcacgccaaacaaa-attgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaaccaacacacaa 36580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 19452 - 19382
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  19452 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 19382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 42150 - 42208
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  42150 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagact 42208  T

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Target: scaffold1613 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 1038 - 1087
Alignment:
Q  21 caaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  1038 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact 1087  T

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Target: scaffold0620 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 3896 - 3841
Alignment:
Q  15 ttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    |||||||||  || ||||||||||||||||||||||| ||||||||||||||||||    
T  3896 ttgagtcaagaaactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

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Target: scaffold0620; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 8198 - 8140
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 70  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||| |||||||||    
T  8198 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 8140  T

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Target: scaffold0063 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 58196 - 58126
Alignment:
Q  12 aacttgagtcaaagaattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 82  Q
    |||||||  |||| |||||||| ||||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  58196 aacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaat 58126  T

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Target: scaffold0063; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 57977 - 57917
Alignment:
Q  302 caaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacgaaca 362  Q
    ||||| || ||||||||| ||| |||| |||| | |||||| |||||||||||||||||||    
T  57977 caaacaccctaaacaccttaacaacccaaaaaacgcaaacatgagctagtgacgacgaaca 57917  T

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