View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1523_high_25 (Length: 361)
Name: NF1523_high_25
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1523_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 14 - 344
Target Start/End: Complemental strand, 25012798 - 25012474
Alignment:
| Q |
14 |
aggtaagtctatgtgttatgtgatataatcctttaattaattttgtgcaatttaattatataataactctagctaactatatgaatttgaattaatttca |
113 |
Q |
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| T |
25012798 |
aggtaagtctatgt--tatgtgatatgatcctttaattaattttgtgcaatttaattatataa---ctctagctaactatgtgaatttgaattaatttca |
25012704 |
T |
|
| Q |
114 |
ggctttggcctattttgattccttccttaaatgaaggatgggagcatatatccaaactcaaatgcagattcaatacattggttattggttcattttgtca |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25012703 |
ggctttggcctattttgattccttccttaaatgaaggatgggagcatatatccaaactcaaatgcagattcaatacattggttattggttcattttgtca |
25012604 |
T |
|
| Q |
214 |
catccagataggagggaacaaaaagtttgcagtgtgctatgaaattttattgcaagctttgtgaataggcctcttaaagannnnnnnaatcatatgtttt |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |
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| T |
25012603 |
catccagataggagggaacaaaaagtttgcagtgtgctatgaaattttattgcaagctttgtgaataggcctctt-aagatttttttaatcatatgtttt |
25012505 |
T |
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| Q |
314 |
tgtgtcctattggtatatgattgaaagggtt |
344 |
Q |
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||||||||||||||||||||||||| ||||| |
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| T |
25012504 |
tgtgtcctattggtatatgattgaaggggtt |
25012474 |
T |
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