View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1523_high_56 (Length: 237)
Name: NF1523_high_56
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1523_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16758452 - 16758672
Alignment:
| Q |
1 |
gtttacacttaccttaatttgaagcagcaatcgaaaaagtttgtcaacacttgtcaaaatttctttatacccttttatggctgtcaccatttgctgcata |
100 |
Q |
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| T |
16758452 |
gtttacacttgccttaatttgaagcagcaatcgaaaaagtttgtcaacacttatcaaaatttctttatacccttttatggctgtcaccatttgctgcata |
16758551 |
T |
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| Q |
101 |
tcgttatggagcctattcggctaccatgtttttgaactgaagcattttaaactttcacggttgaggattaagacagataaatgtattagccttgggaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |
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| T |
16758552 |
tcgttatggagcctattcggctaccatgtttttgaactgaagtattttaaactttcacggttggggattaagacagataaatgtattaaccttgggaaat |
16758651 |
T |
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| Q |
201 |
gattgcgttcatgattgaatt |
221 |
Q |
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|||||| |||||||||||||| |
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| T |
16758652 |
gattgcattcatgattgaatt |
16758672 |
T |
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