View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1523_high_65 (Length: 204)
Name: NF1523_high_65
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1523_high_65 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 27763984 - 27764158
Alignment:
| Q |
13 |
ataactatcaatttgtattaaataagtgaaactttttaaaacaaacatgcatgctttaaaaacatgttctaaatagaactattagttcaattaattaaca |
112 |
Q |
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| T |
27763984 |
ataactatcaatttgtattaaataagtgaaactttttaaaacaaacatgcatgctttaaaaacatgttctaaatagaactattagttcaattaattaaca |
27764083 |
T |
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| Q |
113 |
tgaannnnnnnngttttgttatagggtgaccaagcctcaatagtaggtggtgccatagagtttgtgaaggagttag |
188 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27764084 |
tgaa-tttttttgttttgttatagggtgaccaagcctcaatagtaggtggtgccatagagtttgtgaaggagttag |
27764158 |
T |
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