View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1523_low_14 (Length: 418)

Name: NF1523_low_14
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1523_low_14
NF1523_low_14
[»] chr1 (22 HSPs)
chr1 (1-227)||(34849105-34849329)
chr1 (297-404)||(34849399-34849506)
chr1 (1-48)||(6367656-6367703)
chr1 (1-56)||(34850344-34850399)
chr1 (1-48)||(40210657-40210704)
chr1 (1-47)||(16970823-16970869)
chr1 (1-45)||(42248567-42248611)
chr1 (1-44)||(183482-183525)
chr1 (1-48)||(4960634-4960681)
chr1 (1-48)||(13914354-13914401)
chr1 (1-48)||(17662137-17662184)
chr1 (1-48)||(22103793-22103840)
chr1 (1-48)||(24009828-24009875)
chr1 (1-44)||(24905427-24905470)
chr1 (1-56)||(25065909-25065964)
chr1 (1-44)||(25647978-25648021)
chr1 (1-44)||(28011457-28011500)
chr1 (1-44)||(31514577-31514620)
chr1 (1-44)||(33442854-33442897)
chr1 (1-48)||(37578479-37578526)
chr1 (1-48)||(43758916-43758963)
chr1 (1-43)||(10304017-10304059)
[»] chr4 (20 HSPs)
chr4 (1-227)||(48529671-48529910)
chr4 (297-404)||(48529494-48529601)
chr4 (1-48)||(14801830-14801877)
chr4 (1-48)||(34765667-34765714)
chr4 (1-44)||(4982986-4983029)
chr4 (1-44)||(9145026-9145069)
chr4 (1-44)||(13058131-13058174)
chr4 (1-48)||(16605696-16605743)
chr4 (1-48)||(17356209-17356256)
chr4 (1-44)||(23613403-23613446)
chr4 (1-48)||(24349768-24349815)
chr4 (1-44)||(27934626-27934669)
chr4 (1-48)||(35028285-35028332)
chr4 (1-44)||(36009104-36009147)
chr4 (1-44)||(42738291-42738334)
chr4 (1-44)||(43155787-43155830)
chr4 (1-44)||(49879467-49879510)
chr4 (1-48)||(52298120-52298167)
chr4 (1-48)||(53701906-53701953)
chr4 (1-43)||(44967330-44967372)
[»] chr8 (15 HSPs)
chr8 (56-126)||(29566414-29566484)
chr8 (1-48)||(16388813-16388860)
chr8 (1-48)||(31608800-31608847)
chr8 (1-48)||(36928570-36928617)
chr8 (1-44)||(1425313-1425356)
chr8 (1-44)||(3041716-3041759)
chr8 (1-48)||(13186154-13186201)
chr8 (1-44)||(23663805-23663848)
chr8 (1-48)||(35756676-35756723)
chr8 (1-44)||(36325328-36325371)
chr8 (1-44)||(38845559-38845602)
chr8 (1-48)||(39071770-39071817)
chr8 (1-44)||(40775910-40775953)
chr8 (1-44)||(44407117-44407160)
chr8 (1-43)||(38862712-38862754)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-48)||(69059-69106)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-48)||(37850-37897)
[»] chr7 (14 HSPs)
chr7 (1-48)||(40379863-40379910)
chr7 (1-47)||(27396883-27396929)
chr7 (1-44)||(6253565-6253608)
chr7 (1-48)||(10935888-10935935)
chr7 (1-44)||(17102114-17102157)
chr7 (1-44)||(19204583-19204626)
chr7 (1-44)||(27991833-27991876)
chr7 (1-48)||(28469295-28469342)
chr7 (1-44)||(30948420-30948463)
chr7 (1-48)||(32053430-32053477)
chr7 (1-44)||(32680855-32680898)
chr7 (1-48)||(42731513-42731560)
chr7 (1-46)||(45010893-45010938)
chr7 (1-49)||(24388913-24388961)
[»] chr5 (18 HSPs)
chr5 (1-48)||(32242336-32242383)
chr5 (1-42)||(6150548-6150589)
chr5 (1-44)||(297274-297317)
chr5 (1-44)||(3529133-3529176)
chr5 (1-48)||(5993983-5994030)
chr5 (1-44)||(6758125-6758168)
chr5 (1-44)||(11761843-11761886)
chr5 (1-48)||(24547412-24547459)
chr5 (1-48)||(35512242-35512289)
chr5 (1-44)||(41930610-41930653)
chr5 (1-43)||(38442162-38442204)
chr5 (1-43)||(38475291-38475333)
chr5 (1-42)||(18670293-18670334)
chr5 (1-42)||(28269681-28269722)
chr5 (1-42)||(28771131-28771172)
chr5 (1-42)||(31482664-31482705)
chr5 (4-48)||(12904851-12904895)
chr5 (4-48)||(20840630-20840674)
[»] chr3 (12 HSPs)
chr3 (1-48)||(33689666-33689713)
chr3 (1-48)||(51994173-51994220)
chr3 (1-44)||(2796273-2796316)
chr3 (1-44)||(8041710-8041753)
chr3 (1-44)||(10770751-10770794)
chr3 (1-48)||(23458266-23458313)
chr3 (1-48)||(26463885-26463932)
chr3 (1-48)||(33156281-33156328)
chr3 (1-44)||(36314558-36314601)
chr3 (1-48)||(40758238-40758285)
chr3 (1-44)||(48322637-48322680)
chr3 (1-44)||(54466517-54466560)
[»] chr2 (12 HSPs)
chr2 (1-48)||(15848182-15848229)
chr2 (1-48)||(37895634-37895681)
chr2 (1-48)||(2318252-2318299)
chr2 (1-44)||(6657972-6658015)
chr2 (1-44)||(14900743-14900786)
chr2 (1-44)||(16099149-16099192)
chr2 (1-44)||(33739797-33739840)
chr2 (1-48)||(36382255-36382302)
chr2 (1-48)||(39423609-39423656)
chr2 (1-44)||(39498404-39498447)
chr2 (1-48)||(44714048-44714095)
chr2 (1-42)||(11163316-11163357)
[»] scaffold0559 (1 HSPs)
scaffold0559 (1-44)||(1327-1370)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-56)||(14544-14599)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-44)||(141854-141897)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-44)||(139766-139809)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-44)||(1863-1906)
[»] chr6 (6 HSPs)
chr6 (1-48)||(12080730-12080777)
chr6 (1-48)||(21628000-21628047)
chr6 (1-44)||(28000645-28000688)
chr6 (1-44)||(30337543-30337586)
chr6 (1-48)||(33517628-33517675)
chr6 (1-42)||(30803955-30803996)


Alignment Details
Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34849105 - 34849329
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcaccgattagcaaaagatgatgtgaactgacaaaaatacccctaagacttcagcc 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||  | |||||||||||    
T  34849105 atcatttaaaatttcgtccctctcccctcttaatcactgccacgtcaccgattagcaaaagatgctgtgaactgacaaaaatacc--tgagacttcagcc 34849202  T
Q  101 aaaagcaaaatgaccaaaatgcccccaactcttttttaaatccaacaattcatcttcattcatctccaatgtgaaattcagttcatctaccaatcatcac 200  Q
    |||||| |||||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34849203 aaaagcgaaatgaccaaaatgcccctaactctttcttcaatccaataattcatcttcattcatctccaatatgaaattcagttcatctaccaatcatcac 34849302  T
Q  201 cgccgccatataaccacacacactcaa 227  Q
    |||||||||||||||||||||||||||    
T  34849303 cgccgccatataaccacacacactcaa 34849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 34849399 - 34849506
Alignment:
Q  297 atatataaacaccattgctacatttctcatgtcactatgtaatacatgaaattctcattgttttctttccttccacatgctcgatcactttcctcctctt 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  34849399 atatataaacaccattgctacatttctcatgtcactatgtaatacatgaaattctcattgttttctctccttccacatgctcgatctctttcctcctctt 34849498  T
Q  397 tgttattg 404  Q
    ||||||||    
T  34849499 tgttattg 34849506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6367656 - 6367703
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  6367656 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 6367703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34850399 - 34850344
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcaccgattagc 56  Q
    ||||||||||||||| |||||||| || |||||||| ||||||||||| |||||||    
T  34850399 atcatttaaaatttcatccctctccccacttaatcactgccacgtcactgattagc 34850344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40210704 - 40210657
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  40210704 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 40210657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16970869 - 16970823
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtca 47  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||    
T  16970869 atcatttaaaatttcgtccctctccccacttaatcattgccatgtca 16970823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42248567 - 42248611
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgt 45  Q
    |||||||||||||||||||||||| || |||||||| ||||||||    
T  42248567 atcatttaaaatttcgtccctctccccacttaatcactgccacgt 42248611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 183525 - 183482
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  183525 atcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4960634 - 4960681
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||  || |||||||| |||||||||||    
T  4960634 atcatttaaaatttcgtccctcttcccacttaatcactgccacgtcac 4960681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13914401 - 13914354
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || || ||||| |||||||||||    
T  13914401 atcatttaaaatttcgtccctctccccactaaatcactgccacgtcac 13914354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17662184 - 17662137
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||  || |||||||| |||||||||||    
T  17662184 atcatttaaaatttcgtccctcttcccacttaatcactgccacgtcac 17662137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22103840 - 22103793
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||    
T  22103840 atcacttaaaatttcgtccctctctccacttaatcactgccacgtcac 22103793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24009875 - 24009828
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||| ||||    
T  24009875 atcatttaaaatttcgtccctctccccacttaatcactgccacatcac 24009828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24905470 - 24905427
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  24905470 atcatttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25065964 - 25065909
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcaccgattagc 56  Q
    ||||||||| |||||||||||||| || |||||||| |||||| |||| |||||||    
T  25065964 atcatttaagatttcgtccctctctccacttaatcactgccacctcactgattagc 25065909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25647978 - 25648021
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  25647978 atcatttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28011457 - 28011500
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  28011457 atcatttaaaatttcgtccctctccccacttaatcactgccacg 28011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31514620 - 31514577
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  31514620 atcatttaaaatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33442897 - 33442854
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  33442897 atcatttaaaatttcgtccctctccccacttaatcactgccacg 33442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37578526 - 37578479
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||| ||||| || |||||||| |||||||||||    
T  37578526 atcatttaaaatttcgtcactctccccacttaatcactgccacgtcac 37578479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43758916 - 43758963
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  43758916 atcatttaaaatttcgtccctctctccacttaatcactgccatgtcac 43758963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10304017 - 10304059
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccac 43  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  10304017 atcatttaaaatttcgtccctctccccacttaatcactgccac 10304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 6e-78; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 48529910 - 48529671
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcaccgattagcaaaagatgatgtgaactgacaaaaatacccctaagacttcagcc 100  Q
    |||||||||||||| ||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48529910 atcatttaaaattttgtccctctctccacttaatcactgccacgtcactgattagcaaaagatgatgtgaactgacaaaaatacccttaagacttcagcc 48529811  T
Q  101 aaaagcaaaatgaccaaaatgcccccaactctttttt-------------aaatccaacaattcatcttcattcatctccaatgtgaaattcagttcatc 187  Q
    ||||||||| |||||||| ||||||||||||||| ||              |||||||||||||||||||||||||||||||| |||||||||||||||     
T  48529810 aaaagcaaattgaccaaagtgcccccaactctttcttcaatccaaaaacacaatccaacaattcatcttcattcatctccaatctgaaattcagttcata 48529711  T
Q  188 taccaatcatcaccgccgccatataaccacacacactcaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48529710 taccaatcatcaccgccgccatataaccacacacactcaa 48529671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 297 - 404
Target Start/End: Complemental strand, 48529601 - 48529494
Alignment:
Q  297 atatataaacaccattgctacatttctcatgtcactatgtaatacatgaaattctcattgttttctttccttccacatgctcgatcactttcctcctctt 396  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48529601 atatataaacaccattactccatatctcatgtcactatgtaatacatgaaattctcattgttttctttccttccacatgctcgatcactttcatcctctt 48529502  T
Q  397 tgttattg 404  Q
    ||||||||    
T  48529501 tgttattg 48529494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14801830 - 14801877
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  14801830 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 14801877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34765714 - 34765667
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  34765714 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 34765667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4983029 - 4982986
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  4983029 atcatttaaaatttcgtccctctccccacttaatcactgccacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9145069 - 9145026
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  9145069 atcatttaaaatttcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13058131 - 13058174
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  13058131 atcatttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16605696 - 16605743
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||| | || |||||||| |||||||||||    
T  16605696 atcatttaaaatttcgtccctccccccacttaatcactgccacgtcac 16605743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17356256 - 17356209
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| || ||||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcac 17356209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23613403 - 23613446
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  23613403 atcatttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24349768 - 24349815
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| ||  ||||||| |||||||||||    
T  24349768 atcatttaaaatttcgtccctctccccagttaatcactgccacgtcac 24349815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27934626 - 27934669
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  27934626 atcatttaaaatttcgtccctctccccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35028332 - 35028285
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||| ||||| || |||||||| |||||||||||    
T  35028332 atcatttaaaatttcgtcactctccccacttaatcactgccacgtcac 35028285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36009147 - 36009104
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  36009147 atcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42738334 - 42738291
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  42738334 atcatttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43155830 - 43155787
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  43155830 atcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49879510 - 49879467
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  49879510 atcatttaaaatttcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52298120 - 52298167
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||| ||||| || |||||||| |||||||||||    
T  52298120 atcatttaaaatttcgtctctctccccacttaatcactgccacgtcac 52298167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 53701906 - 53701953
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    ||||||||||||||| |||||||| || |||||||| |||||||||||    
T  53701906 atcatttaaaatttcttccctctccccacttaatcactgccacgtcac 53701953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44967372 - 44967330
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccac 43  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  44967372 atcatttaaaatttcgtccctctccccacttaatcactgccac 44967330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 29566484 - 29566414
Alignment:
Q  56 caaaagatgatgtgaactgacaaaaatacccctaagacttcagccaaaagcaaaatgaccaaaatgccccc 126  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||   ||||||||||||    
T  29566484 caaaagatggtgtgaactgacaaaaatacccctaagactttagccaaaaacaaaataggcaaaatgccccc 29566414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16388860 - 16388813
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  16388860 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 16388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31608847 - 31608800
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  31608847 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 31608800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36928570 - 36928617
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  36928570 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 36928617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1425356 - 1425313
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  1425356 atcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3041759 - 3041716
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  3041759 atcatttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13186154 - 13186201
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||| ||||| || |||||||| |||||||||||    
T  13186154 atcatttaaaatttcgtctctctccccacttaatcactgccacgtcac 13186201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23663848 - 23663805
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  23663848 atcatttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35756676 - 35756723
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  35756676 atcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 35756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36325328 - 36325371
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  36325328 atcatttaaaatttcgtccctctccccacttaatcactgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38845602 - 38845559
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  38845602 atcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39071770 - 39071817
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||| ||||||    
T  39071770 atcatttaaaatttcgtccctctccccacttaatcactgccgcgtcac 39071817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40775953 - 40775910
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  40775953 atcatttaaaatttcgtccctctccccacttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44407160 - 44407117
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  44407160 atcatttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38862712 - 38862754
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccac 43  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  38862712 atcatttaaaatttcgtccctctccccacttaatcactgccac 38862754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 69059 - 69106
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  69059 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 69106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37897 - 37850
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  37897 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 37850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40379863 - 40379910
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  40379863 atcatttaaaatttcgtccctctccccacttaatcaatgccacgtcac 40379910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27396929 - 27396883
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtca 47  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||    
T  27396929 atcatttaaaatttcgtccctctccccacttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6253565 - 6253608
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  6253565 atcatttaaaatttcgtccctctctccacttaatcaatgccacg 6253608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10935888 - 10935935
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  10935888 atcatttaaaatttcgtccctctctccacttaatcactgccatgtcac 10935935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17102114 - 17102157
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  17102114 atcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19204583 - 19204626
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||| ||||||||| || ||||||||||||||||    
T  19204583 atcatttaaaattttgtccctctccccacttaatcattgccacg 19204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27991833 - 27991876
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  27991833 atcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28469342 - 28469295
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| | |||||||||    
T  28469342 atcatttaaaatttcgtccctctccccacttaatcactaccacgtcac 28469295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30948463 - 30948420
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  30948463 atcatttaaaatttcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32053477 - 32053430
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| || ||||||||    
T  32053477 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcac 32053430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32680898 - 32680855
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  32680898 atcatttaaaatttcgtccctctccccacttaatcactgccacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42731513 - 42731560
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  42731513 atcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 42731560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45010938 - 45010893
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtc 46  Q
    |||||||||||||||||| ||||| || |||||||| |||||||||    
T  45010938 atcatttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24388913 - 24388961
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcacc 49  Q
    |||| ||||||||||||||||||| || |||||||| |||||| |||||    
T  24388913 atcacttaaaatttcgtccctctccccacttaatcactgccacatcacc 24388961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32242336 - 32242383
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  32242336 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 32242383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6150548 - 6150589
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  6150548 atcatttaaaatttcgtccctctccccacttaatcattgcca 6150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 297317 - 297274
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  297317 atcatttaaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3529176 - 3529133
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  3529176 atcatttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5993983 - 5994030
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  5993983 atcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 5994030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6758168 - 6758125
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  6758168 atcatttaaaatttcgtccctctccccacttaatcactgccacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11761843 - 11761886
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    ||||||||||||||||||| |||| || ||||||||||||||||    
T  11761843 atcatttaaaatttcgtccatctccccacttaatcattgccacg 11761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24547459 - 24547412
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || ||||| || |||||||||||    
T  24547459 atcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35512242 - 35512289
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||| ||||    
T  35512242 atcatttaaaatttcgtccctctccccacttaatcactgccacatcac 35512289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41930610 - 41930653
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  41930610 atcatttaaaatttcgtccctctccccacttaatcactgccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38442162 - 38442204
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccac 43  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  38442162 atcatttaaaatttcgtccctctccccacttaatcactgccac 38442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38475333 - 38475291
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccac 43  Q
    |||||||||||||||||||||||| || |||||||| ||||||    
T  38475333 atcatttaaaatttcgtccctctccccacttaatcactgccac 38475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18670293 - 18670334
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    ||||||||||||||||||| |||| || ||||||||||||||    
T  18670293 atcatttaaaatttcgtccatctccccacttaatcattgcca 18670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28269722 - 28269681
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  28269722 atcatttaaaatttcgtccctctccccacttaatcactgcca 28269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28771172 - 28771131
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  28771172 atcatttaaaatttcgtccctctccccacttaatcactgcca 28771131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31482705 - 31482664
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  31482705 atcatttaaaatttcgtccctctccccacttaatcactgcca 31482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 12904851 - 12904895
Alignment:
Q  4 atttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    ||||||||||||||||||||| || |||||||| || ||||||||    
T  12904851 atttaaaatttcgtccctctccccacttaatcaatgtcacgtcac 12904895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 20840630 - 20840674
Alignment:
Q  4 atttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    ||||||||||| ||||||||| || |||||||| |||||||||||    
T  20840630 atttaaaattttgtccctctccccacttaatcactgccacgtcac 20840674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33689713 - 33689666
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  33689713 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 33689666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51994220 - 51994173
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  51994220 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2796273 - 2796316
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  2796273 atcatttaaaatttcgtccctctccccacttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8041710 - 8041753
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  8041710 atcatttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10770794 - 10770751
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  10770794 atcatttaaaatttcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23458313 - 23458266
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||| ||||    
T  23458313 atcatttaaaatttcgtccctctccccacttaatcactgccacatcac 23458266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26463932 - 26463885
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| || ||||||||    
T  26463932 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcac 26463885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33156328 - 33156281
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||| | || |||||||| |||||||||||    
T  33156328 atcatttaaaatttcgtccctccccccacttaatcactgccacgtcac 33156281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36314601 - 36314558
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  36314601 atcatttaaaatttcgtccctctccccacttaatcactgccacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40758238 - 40758285
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| | |||||||||    
T  40758238 atcatttaaaatttcgtccctctccccacttaatcactaccacgtcac 40758285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48322680 - 48322637
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  48322680 atcatttaaaatttcgtccctctccccacttaatcactgccacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54466517 - 54466560
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  54466517 atcatttaaaatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15848182 - 15848229
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  15848182 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 15848229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37895681 - 37895634
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||    
T  37895681 atcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 37895634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2318252 - 2318299
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||| | |||||||||||    
T  2318252 atcatttaaaatttcgtccctctccccacttaattaatgccacgtcac 2318299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6657972 - 6658015
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  6657972 atcatttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14900786 - 14900743
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  14900786 atcatttaaaatttcgtccctctccccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16099149 - 16099192
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  16099149 atcatttaaaatttcgtccctctccccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33739797 - 33739840
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  33739797 atcatttaaaatttcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36382255 - 36382302
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    ||||||||||||||| |||||||| || |||||||| |||||||||||    
T  36382255 atcatttaaaatttcatccctctccccacttaatcactgccacgtcac 36382302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39423609 - 39423656
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  39423609 atcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 39423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39498404 - 39498447
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  39498404 atcatttaaaatttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44714095 - 44714048
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  44714095 atcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 44714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11163357 - 11163316
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  11163357 atcatttaaaatttcgtccctctccccacttaatcactgcca 11163316  T

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Target: scaffold0559 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1327 - 1370
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  1327 atcatttaaaatttcgtccctctccccacttaatcactgccacg 1370  T

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Target: scaffold0347 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14599 - 14544
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcaccgattagc 56  Q
    ||||||||| |||||||||||||| || |||||||| |||||| |||| |||||||    
T  14599 atcatttaagatttcgtccctctccccacttaatcactgccacatcactgattagc 14544  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 141897 - 141854
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  141897 atcatttaaaatttcgtccctctccccacttaatcactgccacg 141854  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 139766 - 139809
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  139766 atcatttaaaatttcgtccctctccccacttaatcactgccacg 139809  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1863 - 1906
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  1863 atcatttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000009; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12080730 - 12080777
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  12080730 atcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 12080777  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21628047 - 21628000
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||| ||||||||| || |||||||| |||||||||||    
T  21628047 atcatttaaaattttgtccctctccccacttaatcactgccacgtcac 21628000  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28000688 - 28000645
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  28000688 atcatttaaaatttcgtccctctccccacttaatcactgccacg 28000645  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30337543 - 30337586
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacg 44  Q
    |||||||||||||||||||||||| || |||||||| |||||||    
T  30337543 atcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33517628 - 33517675
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgccacgtcac 48  Q
    |||||||||||||||||||||||| || |||||||| ||| |||||||    
T  33517628 atcatttaaaatttcgtccctctccccacttaatcactgctacgtcac 33517675  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30803955 - 30803996
Alignment:
Q  1 atcatttaaaatttcgtccctctcacctcttaatcattgcca 42  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  30803955 atcatttaaaatttcgtccctctccccacttaatcactgcca 30803996  T

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