View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1523_low_33 (Length: 337)
Name: NF1523_low_33
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1523_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 35256018 - 35256342
Alignment:
| Q |
1 |
gtccccgaactttttggaaacatgagaaaacaaaacaagaatcaccacaacatgaaatctggttttgaaacttttggcatattccctctgcatgcatgtt |
100 |
Q |
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| T |
35256018 |
gtccccgaactttttggaaacatgagaaaacaaaacaagaatcaccacaacatgaaatctggttttgatacttttggcatattccctctgcatgcatgtt |
35256117 |
T |
|
| Q |
101 |
agttgcataacattgttcgtttcttgagattcaagtttatcannnnnnnnnnnnnnn--gttaacaatatatgcatgaaattatttgaattaatatcttc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
35256118 |
agttgcataacattgttcgtttcttgagattcaagtttatcatttttttttttttgtttgttaacaatatatgcatgaaattatttgaattaatatcttc |
35256217 |
T |
|
| Q |
199 |
atttggggtatccatgttaatggagaagggtatccaaaataactgaaaagcattggaagaaaaacacacacaatgattggtaaagatggaggtgttttta |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35256218 |
atttggggtatccatgttaatggagaagggtatccaaaataactgaaaagcattggaagaaaaacacacacaatgattggtaaagatggaggtgttttta |
35256317 |
T |
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| Q |
299 |
aggcatgggaagccacggtgagaag |
323 |
Q |
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||||||||||||||||||||||||| |
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| T |
35256318 |
aggcatgggaagccacggtgagaag |
35256342 |
T |
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