View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1523_low_45 (Length: 274)
Name: NF1523_low_45
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1523_low_45 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 24656040 - 24655776
Alignment:
| Q |
10 |
aagaatatctacaagagttcaagattttaaggtcaaataaattggcaaagcaattccatgctagaattcaaggatttcacaaaaacaattcatgtgagtc |
109 |
Q |
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| T |
24656040 |
aagaaaatctacaagagttcaagattttaaggtcaaataaattggcaaagcaattccatgctagaattcaaggatttcacaaaaacaattcatgtgagtc |
24655941 |
T |
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| Q |
110 |
acaattcttcatgacatggatttcaccttcaagtttatttggatcaagagaaactttgtctatagaaagtgttttcaaggttcaacctcaagcatgtttg |
209 |
Q |
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| T |
24655940 |
acaattcttcatgacatggatttcaccttcaagttcatttggatcaagagaaactttatctatagaaagtgttttcaaggttcaacctcaagcatgtttg |
24655841 |
T |
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| Q |
210 |
acaattctatcaagaactttggactcaattcatggctacaaaattctcaaaccattcattgataa |
274 |
Q |
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| T |
24655840 |
acaattttatcaagaactttagactcaattcatggctacaaaattctcaaaccattcattgataa |
24655776 |
T |
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