View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1523_low_69 (Length: 209)
Name: NF1523_low_69
Description: NF1523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1523_low_69 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 46018030 - 46018201
Alignment:
| Q |
16 |
caaaggacagaggatttgcatttacttgttccaacgtgtaacttccaaatagaccaacccgtgatacctcttctccagaaaagtatggcgacgacatttc |
115 |
Q |
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| T |
46018030 |
caaaggacagaggatttgcatttacttgttccaacgtgtaacttccaaatagaccaacccgtgatacctcttctccagaaaagtatggcgacgacatttc |
46018129 |
T |
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| Q |
116 |
tcccaaggctgccatttgatcacaaaattcagaaccaacaaggctactttgtgagattgaggtagtcggcca |
187 |
Q |
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| T |
46018130 |
tcccaaggctgccatttgatcacaaaattcagaaccaacaaggccactttgtgagattgaggtagtcggcca |
46018201 |
T |
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