View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1524-Insertion-7 (Length: 551)
Name: NF1524-Insertion-7
Description: NF1524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1524-Insertion-7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 480; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 8 - 551
Target Start/End: Original strand, 31020455 - 31020992
Alignment:
| Q |
8 |
aattatacagtaaactaagaaaaattaannnnnnngtttataatagtgattgcacgatgtattttttatgtaattttgaatggatcggattggtatgatt |
107 |
Q |
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| T |
31020455 |
aattatacagtaaactaaaaaaaattaatttttttgtttataatagtgattgcacgatgtattttttatgtaattttgaatggatcggattggtatgatt |
31020554 |
T |
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| Q |
108 |
tgaatttgatatatgtgatgttggaatggtgaaattggtgaacggtcactagaaatgtgaatgtggatttggatttggatttcctgcatttggaaaaaat |
207 |
Q |
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| T |
31020555 |
tgaatttgatatatgtgatgttggaatggtgaaattggtgaatggtcactagaaatgtgaatgtgga------tttggatttcctgcatttggaaaaaat |
31020648 |
T |
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| Q |
208 |
cctacatttcatatcgttttgcatctcgagttgttggatctatgttttaattcagtactttgtaccgtctttatcgatttgaaaatgtgagttgtctgat |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
31020649 |
cctacatttcatatcgttttgcatctcgagttgttggatctatgttttaattcagtactttgtaccgtatttatcgatttgaaaatgtgagttgtctgat |
31020748 |
T |
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| Q |
308 |
cttgattggatggtctgagatgtataatggtggagaatttagaatatgtgtggaatttgaatttcttgattgcatagatttgtctctttgcagaagactt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31020749 |
cttgattggatggtctgagatgtataatggtggagaatttagaatatgtgtggaatttgaatttcttgattgcatagatttgtctctttgcagaagactt |
31020848 |
T |
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| Q |
408 |
gaggagtaataaatgtgtttttgcgcctctctgttattataggttgatgttgattgggtaatctcgtgcgttatgctcctttttaatggtaacacttggt |
507 |
Q |
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| T |
31020849 |
gaggagtaataaatttgtttttgcgcctctctgttattataggttgatgttgattgggtaatctcgtgtgttatgctcctttttaatggtaacacttggt |
31020948 |
T |
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| Q |
508 |
gcggtttgtgtgtgcaattgtgcatctataaataggtgttaatt |
551 |
Q |
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| T |
31020949 |
gcggtttgtgtgtgcaattgtgcatctataaataggtgttaatt |
31020992 |
T |
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