View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15242_low_5 (Length: 313)
Name: NF15242_low_5
Description: NF15242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15242_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 35272930 - 35273208
Alignment:
| Q |
17 |
aaaataagaaaatcttttcatttttatattctactttgtgatcgattagtgaaccgggccagactgacaggtaaaacagttgaaccttgaaccagatatt |
116 |
Q |
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| T |
35272930 |
aaaataagaaaatcttttcatttttatattctactttgtgatcgattagtgaaccgggccagactgacaggtaaaacagttgaaccttgaaccagatatt |
35273029 |
T |
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| Q |
117 |
tgtgcggtccaatcctttgaaccgggataaaaccaattaagctggcacaggctgcctcagcacacaaataacagccatgcacacggtccgtagcgtcgca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35273030 |
tgtgcggtccaatcctttgaaccgggataaaaccaattaagctggcacaggctgcctcagcacacaaataacagccatgcacacggtccgtagcgtcgca |
35273129 |
T |
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| Q |
217 |
gtgaggttgcttcctttgcatcagctcgcaagtcagacctccaccgttgatggcgacataccactgccaatctctctct |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
35273130 |
gtgaggttgcttcctttgcatcagctcgcaagtcagacctccaccgttgatggcgacataccgctgccaatctctctct |
35273208 |
T |
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