View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15247_high_7 (Length: 376)
Name: NF15247_high_7
Description: NF15247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15247_high_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 10929643 - 10930018
Alignment:
| Q |
1 |
ctgaggcattgaaaactgtcattgaatctggagaatttgatcttgactatcaagatgatagtggtttctcagcggctatgcatacagctgtgaaaggtca |
100 |
Q |
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| T |
10929643 |
ctgaagcattgaaaactgtcattgaatctggagaatttgatcttgactatcaagatgatagtggtttctcagcggctatgcatacagctgtgaaaggtca |
10929742 |
T |
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| Q |
101 |
cgttgagtcatttcgattgcttgtatatgctggagccgatgtaaagttatgcaataaatctggtgaaacagcaataacactatctgaattgaatcagaaa |
200 |
Q |
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| T |
10929743 |
cgttgagtcatttcgattgcttgtatatgctggagccgatgtgaagttatgcaataaatctggtgaaacagcaataacactatctgaattgaatcagaac |
10929842 |
T |
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| Q |
201 |
tgtaatttatttgaaaaggtcatgcttgaatttacacttgaaaagggtaatcaaaatactggtggcttctatgctttacactgtgcagctcgtcgtggtg |
300 |
Q |
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| T |
10929843 |
tgtaatttatttgaaaaggtcatgcttgaatttacacttgaaaagggtaatcaaaatactggtggcttctatgctttacactgtgcagctcgtcgtggtg |
10929942 |
T |
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| Q |
301 |
atttggatgctgttacattgctgaccagcaaaggtttcgatgtgaatgttccagatggggaggactacactccact |
376 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10929943 |
atttggatgctgttacattactgaccagcaaaggtttcgatgtgaatgttccagatggggaggactacactccact |
10930018 |
T |
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