View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15247_low_14 (Length: 266)

Name: NF15247_low_14
Description: NF15247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15247_low_14
NF15247_low_14
[»] chr2 (26 HSPs)
chr2 (12-266)||(14179676-14179930)
chr2 (12-266)||(14183414-14183668)
chr2 (51-266)||(24717908-24718123)
chr2 (53-205)||(23968632-23968784)
chr2 (24-119)||(149601-149696)
chr2 (20-218)||(28652548-28652745)
chr2 (189-266)||(24436675-24436752)
chr2 (184-266)||(24780788-24780870)
chr2 (12-119)||(12626527-12626634)
chr2 (20-103)||(23801351-23801434)
chr2 (198-266)||(21369329-21369397)
chr2 (24-95)||(1383771-1383842)
chr2 (135-218)||(19647206-19647289)
chr2 (184-266)||(2523695-2523777)
chr2 (184-266)||(5031077-5031159)
chr2 (124-205)||(25584272-25584352)
chr2 (202-266)||(22251396-22251460)
chr2 (202-266)||(36841267-36841331)
chr2 (184-266)||(9975951-9976033)
chr2 (136-218)||(20005967-20006049)
chr2 (140-218)||(45535903-45535981)
chr2 (184-241)||(22501993-22502050)
chr2 (184-241)||(22509927-22509984)
chr2 (190-254)||(20916335-20916399)
chr2 (24-62)||(21072839-21072877)
chr2 (216-266)||(31521223-31521273)
[»] chr8 (25 HSPs)
chr8 (20-253)||(12037125-12037358)
chr8 (49-266)||(21579154-21579371)
chr8 (49-263)||(29762819-29763033)
chr8 (49-218)||(22474643-22474812)
chr8 (49-226)||(17978404-17978581)
chr8 (53-215)||(41680132-41680294)
chr8 (49-253)||(22208155-22208360)
chr8 (67-266)||(22258254-22258454)
chr8 (89-218)||(36405128-36405257)
chr8 (12-119)||(22483630-22483737)
chr8 (184-266)||(18761470-18761552)
chr8 (196-266)||(19140798-19140868)
chr8 (196-266)||(36306031-36306101)
chr8 (124-168)||(22966772-22966816)
chr8 (184-266)||(42817855-42817937)
chr8 (124-253)||(20879435-20879565)
chr8 (200-266)||(23943774-23943840)
chr8 (124-165)||(21697509-21697550)
chr8 (24-93)||(26220415-26220484)
chr8 (25-93)||(26222469-26222537)
chr8 (196-266)||(18834456-18834526)
chr8 (181-218)||(20517032-20517069)
chr8 (196-253)||(22345198-22345257)
chr8 (196-253)||(22356858-22356917)
chr8 (184-224)||(22708314-22708354)
[»] chr4 (30 HSPs)
chr4 (49-266)||(40230193-40230410)
chr4 (49-241)||(33243267-33243459)
chr4 (49-266)||(44023555-44023768)
chr4 (49-218)||(19565914-19566083)
chr4 (49-226)||(46741086-46741263)
chr4 (53-218)||(12623207-12623372)
chr4 (49-266)||(12424238-12424458)
chr4 (49-167)||(33186789-33186907)
chr4 (24-119)||(16296733-16296828)
chr4 (24-266)||(9638871-9639114)
chr4 (140-266)||(25513828-25513955)
chr4 (27-119)||(35660753-35660845)
chr4 (124-218)||(18462986-18463079)
chr4 (184-266)||(25091675-25091757)
chr4 (184-266)||(53630422-53630504)
chr4 (184-266)||(19022366-19022448)
chr4 (194-266)||(42875829-42875901)
chr4 (184-266)||(10356384-10356466)
chr4 (124-218)||(14477594-14477687)
chr4 (27-95)||(14549515-14549583)
chr4 (124-168)||(20150787-20150831)
chr4 (140-227)||(26921496-26921584)
chr4 (24-95)||(19434778-19434849)
chr4 (124-218)||(13165095-13165188)
chr4 (184-266)||(19610346-19610428)
chr4 (24-93)||(14281113-14281182)
chr4 (195-266)||(10694193-10694264)
chr4 (195-266)||(10907959-10908030)
chr4 (163-226)||(26014285-26014348)
chr4 (24-93)||(54798024-54798093)
[»] chr7 (37 HSPs)
chr7 (49-266)||(15119255-15119472)
chr7 (49-266)||(14160804-14161021)
chr7 (49-266)||(43276692-43276909)
chr7 (49-218)||(14317959-14318128)
chr7 (49-200)||(9743093-9743244)
chr7 (49-266)||(8513701-8513920)
chr7 (20-111)||(19282904-19282995)
chr7 (20-119)||(13315176-13315275)
chr7 (12-103)||(38295452-38295543)
chr7 (184-266)||(12465208-12465290)
chr7 (184-266)||(8851107-8851189)
chr7 (184-266)||(11067490-11067572)
chr7 (184-266)||(12372296-12372378)
chr7 (184-266)||(13147420-13147502)
chr7 (184-266)||(32433537-32433619)
chr7 (26-95)||(47975010-47975079)
chr7 (112-266)||(8488042-8488197)
chr7 (24-95)||(12754784-12754855)
chr7 (196-266)||(58361-58431)
chr7 (184-266)||(12322878-12322960)
chr7 (184-266)||(16999458-16999540)
chr7 (140-218)||(42565829-42565907)
chr7 (27-93)||(48274349-48274415)
chr7 (184-253)||(12127124-12127193)
chr7 (189-266)||(19283083-19283160)
chr7 (179-253)||(37539465-37539541)
chr7 (223-266)||(16214535-16214578)
chr7 (179-242)||(19195628-19195691)
chr7 (223-266)||(32160148-32160191)
chr7 (179-218)||(33060455-33060494)
chr7 (184-266)||(12754561-12754642)
chr7 (24-93)||(10063021-10063090)
chr7 (24-60)||(708675-708711)
chr7 (196-253)||(13744469-13744528)
chr7 (184-224)||(21661278-21661318)
chr7 (196-253)||(38299782-38299841)
chr7 (184-264)||(47974770-47974850)
[»] chr3 (34 HSPs)
chr3 (49-241)||(53646032-53646224)
chr3 (49-205)||(54330316-54330472)
chr3 (49-266)||(14152347-14152565)
chr3 (49-167)||(5215533-5215651)
chr3 (158-266)||(50350764-50350872)
chr3 (12-111)||(12917416-12917515)
chr3 (184-266)||(17541456-17541538)
chr3 (49-136)||(15566399-15566486)
chr3 (12-119)||(45803432-45803539)
chr3 (124-218)||(21845648-21845741)
chr3 (184-266)||(22306531-22306613)
chr3 (124-218)||(48631294-48631387)
chr3 (184-266)||(17047148-17047230)
chr3 (189-266)||(41172319-41172396)
chr3 (27-95)||(6805046-6805114)
chr3 (125-167)||(15566706-15566748)
chr3 (184-266)||(17044988-17045070)
chr3 (135-218)||(3160623-3160706)
chr3 (184-266)||(11259453-11259535)
chr3 (184-266)||(15931456-15931538)
chr3 (184-266)||(17694089-17694171)
chr3 (184-266)||(35354624-35354706)
chr3 (194-266)||(17539138-17539210)
chr3 (24-87)||(14641676-14641739)
chr3 (184-226)||(11563747-11563789)
chr3 (24-62)||(18890287-18890325)
chr3 (194-264)||(45530553-45530622)
chr3 (24-93)||(10551167-10551236)
chr3 (49-94)||(14508733-14508778)
chr3 (13-62)||(16643935-16643984)
chr3 (24-93)||(21619245-21619314)
chr3 (24-93)||(36167394-36167463)
chr3 (184-224)||(6003207-6003247)
chr3 (181-209)||(12155030-12155058)
[»] chr5 (15 HSPs)
chr5 (49-264)||(26762289-26762504)
chr5 (49-226)||(14025795-14025972)
chr5 (49-253)||(8503849-8504053)
chr5 (49-226)||(8833194-8833371)
chr5 (49-226)||(26749919-26750095)
chr5 (109-222)||(1626910-1627023)
chr5 (124-266)||(23199155-23199297)
chr5 (12-253)||(21503989-21504232)
chr5 (199-266)||(21398592-21398659)
chr5 (124-168)||(24068191-24068235)
chr5 (24-95)||(36508862-36508933)
chr5 (184-241)||(21300017-21300074)
chr5 (24-93)||(18318322-18318391)
chr5 (24-93)||(20765367-20765436)
chr5 (149-205)||(21398805-21398862)
[»] scaffold0371 (2 HSPs)
scaffold0371 (49-266)||(10394-10611)
scaffold0371 (152-266)||(3864-3978)
[»] chr6 (26 HSPs)
chr6 (49-241)||(23431420-23431612)
chr6 (25-253)||(25921864-25922092)
chr6 (49-264)||(31734594-31734809)
chr6 (49-227)||(18455060-18455238)
chr6 (49-226)||(22557135-22557311)
chr6 (49-226)||(7217232-7217408)
chr6 (49-218)||(32259732-32259901)
chr6 (60-167)||(23657986-23658093)
chr6 (20-119)||(29045122-29045221)
chr6 (124-253)||(1818915-1819045)
chr6 (184-266)||(7827994-7828076)
chr6 (196-266)||(17318114-17318184)
chr6 (184-266)||(23150235-23150317)
chr6 (184-266)||(19655179-19655261)
chr6 (179-253)||(13285765-13285841)
chr6 (201-266)||(20410460-20410525)
chr6 (184-263)||(27125428-27125507)
chr6 (184-266)||(18703590-18703672)
chr6 (184-266)||(18709525-18709607)
chr6 (24-93)||(16447892-16447961)
chr6 (24-93)||(21119944-21120013)
chr6 (140-253)||(34140415-34140529)
chr6 (196-253)||(34153031-34153090)
chr6 (25-218)||(25601326-25601515)
chr6 (24-93)||(19102600-19102669)
chr6 (158-218)||(18459302-18459362)
[»] chr1 (30 HSPs)
chr1 (49-266)||(41225402-41225619)
chr1 (49-266)||(41226655-41226872)
chr1 (49-226)||(44892336-44892513)
chr1 (49-226)||(14792551-14792728)
chr1 (49-226)||(18121490-18121667)
chr1 (49-227)||(38887074-38887252)
chr1 (20-225)||(21243746-21243931)
chr1 (20-111)||(17901905-17901996)
chr1 (20-111)||(21239146-21239237)
chr1 (20-119)||(6834024-6834126)
chr1 (24-119)||(8306466-8306561)
chr1 (124-217)||(39061283-39061375)
chr1 (184-266)||(19676733-19676815)
chr1 (194-266)||(20633579-20633651)
chr1 (27-111)||(35894964-35895048)
chr1 (184-266)||(21045997-21046079)
chr1 (140-265)||(28476683-28476809)
chr1 (124-168)||(40390112-40390156)
chr1 (24-95)||(7052132-7052203)
chr1 (124-218)||(21188030-21188123)
chr1 (104-157)||(11808235-11808288)
chr1 (199-266)||(20588675-20588742)
chr1 (199-266)||(20593213-20593280)
chr1 (24-95)||(24723579-24723650)
chr1 (196-266)||(12710901-12710971)
chr1 (24-167)||(8276037-8276180)
chr1 (20-119)||(22145763-22145863)
chr1 (24-167)||(38056720-38056863)
chr1 (195-241)||(16058287-16058333)
chr1 (24-62)||(28313212-28313250)
[»] scaffold0020 (1 HSPs)
scaffold0020 (62-266)||(174121-174325)
[»] scaffold0439 (1 HSPs)
scaffold0439 (51-226)||(4310-4485)
[»] scaffold0401 (1 HSPs)
scaffold0401 (50-226)||(8709-8885)
[»] scaffold0385 (1 HSPs)
scaffold0385 (49-226)||(232-409)
[»] scaffold0063 (1 HSPs)
scaffold0063 (49-218)||(62605-62774)
[»] scaffold0630 (1 HSPs)
scaffold0630 (49-218)||(8950-9119)
[»] scaffold0039 (1 HSPs)
scaffold0039 (49-226)||(9916-10093)
[»] scaffold0011 (1 HSPs)
scaffold0011 (49-218)||(33341-33510)
[»] scaffold0048 (1 HSPs)
scaffold0048 (49-226)||(56863-57037)
[»] scaffold0431 (1 HSPs)
scaffold0431 (49-266)||(5517-5737)
[»] scaffold0121 (1 HSPs)
scaffold0121 (55-159)||(20092-20196)
[»] scaffold1160 (1 HSPs)
scaffold1160 (49-159)||(571-681)
[»] scaffold0108 (1 HSPs)
scaffold0108 (49-167)||(6303-6422)
[»] scaffold0594 (1 HSPs)
scaffold0594 (21-111)||(2099-2189)
[»] scaffold1437 (1 HSPs)
scaffold1437 (49-165)||(343-459)
[»] scaffold0021 (3 HSPs)
scaffold0021 (50-130)||(169328-169408)
scaffold0021 (135-220)||(17078-17163)
scaffold0021 (135-220)||(26609-26694)
[»] scaffold0004 (1 HSPs)
scaffold0004 (20-111)||(66183-66273)
[»] scaffold0125 (1 HSPs)
scaffold0125 (140-257)||(28528-28646)
[»] scaffold0676 (2 HSPs)
scaffold0676 (27-119)||(2679-2771)
scaffold0676 (140-241)||(2858-2960)
[»] scaffold0092 (1 HSPs)
scaffold0092 (23-218)||(38438-38633)
[»] scaffold0148 (1 HSPs)
scaffold0148 (20-119)||(8699-8798)
[»] scaffold0213 (1 HSPs)
scaffold0213 (124-266)||(19169-19311)
[»] scaffold0080 (1 HSPs)
scaffold0080 (195-266)||(21741-21812)
[»] scaffold1283 (1 HSPs)
scaffold1283 (184-266)||(416-498)
[»] scaffold0337 (1 HSPs)
scaffold0337 (124-218)||(3167-3260)
[»] scaffold0019 (1 HSPs)
scaffold0019 (184-266)||(24079-24161)
[»] scaffold0001 (3 HSPs)
scaffold0001 (184-266)||(77709-77791)
scaffold0001 (184-266)||(32016-32098)
scaffold0001 (184-266)||(37323-37405)
[»] scaffold0047 (1 HSPs)
scaffold0047 (184-264)||(79071-79151)
[»] scaffold0328 (1 HSPs)
scaffold0328 (48-241)||(18613-18808)
[»] scaffold0058 (1 HSPs)
scaffold0058 (135-218)||(59652-59735)
[»] scaffold0737 (1 HSPs)
scaffold0737 (184-266)||(4662-4744)
[»] scaffold0077 (1 HSPs)
scaffold0077 (184-266)||(34361-34443)
[»] scaffold0064 (1 HSPs)
scaffold0064 (184-266)||(58768-58850)
[»] scaffold0036 (1 HSPs)
scaffold0036 (184-266)||(78133-78215)
[»] scaffold0017 (1 HSPs)
scaffold0017 (124-218)||(23576-23669)
[»] scaffold0149 (1 HSPs)
scaffold0149 (26-95)||(21404-21473)
[»] scaffold0145 (1 HSPs)
scaffold0145 (124-168)||(8086-8130)
[»] scaffold0120 (1 HSPs)
scaffold0120 (124-168)||(29273-29317)
[»] scaffold0007 (1 HSPs)
scaffold0007 (27-167)||(16467-16609)
[»] scaffold0217 (1 HSPs)
scaffold0217 (135-218)||(28686-28769)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-95)||(21984-22055)
[»] scaffold1633 (1 HSPs)
scaffold1633 (184-266)||(1227-1309)
[»] scaffold1102 (1 HSPs)
scaffold1102 (136-218)||(1947-2029)
[»] scaffold0956 (1 HSPs)
scaffold0956 (184-266)||(2577-2659)
[»] scaffold0395 (1 HSPs)
scaffold0395 (192-266)||(11919-11993)
[»] scaffold0379 (1 HSPs)
scaffold0379 (196-266)||(10981-11051)
[»] scaffold0165 (1 HSPs)
scaffold0165 (122-220)||(31890-31987)
[»] scaffold1939 (1 HSPs)
scaffold1939 (73-216)||(38-181)
[»] scaffold0107 (1 HSPs)
scaffold0107 (194-266)||(13500-13572)
[»] scaffold0074 (1 HSPs)
scaffold0074 (190-266)||(1966-2042)
[»] scaffold0261 (1 HSPs)
scaffold0261 (140-226)||(6408-6494)
[»] scaffold0394 (1 HSPs)
scaffold0394 (124-218)||(7510-7603)
[»] scaffold0162 (1 HSPs)
scaffold0162 (216-266)||(23840-23890)
[»] scaffold0022 (1 HSPs)
scaffold0022 (24-93)||(117293-117362)
[»] scaffold0256 (1 HSPs)
scaffold0256 (24-84)||(1971-2031)
[»] scaffold1800 (1 HSPs)
scaffold1800 (179-218)||(624-663)
[»] scaffold0139 (1 HSPs)
scaffold0139 (124-218)||(40157-40253)
[»] scaffold0059 (1 HSPs)
scaffold0059 (179-218)||(49746-49785)
[»] scaffold0819 (1 HSPs)
scaffold0819 (84-121)||(5289-5326)
[»] scaffold0203 (1 HSPs)
scaffold0203 (184-241)||(17913-17970)
[»] scaffold1434 (1 HSPs)
scaffold1434 (184-224)||(1349-1389)
[»] scaffold0031 (1 HSPs)
scaffold0031 (196-253)||(127302-127361)


Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 266
Target Start/End: Complemental strand, 14179930 - 14179676
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  14179930 ataggaaacactacctatgattattccacaacctgaacaccaattattaacctagttcatcagattatctactctttctacaatcaattttagtttcaaa 14179831  T
Q  112 ccctaattccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatc 211  Q
    |||||||||||||||||||||| |||||||||| || |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |    
T  14179830 ccctaattccacaacatcaaaatctattaacaagtataaggataaaccttttttcaggattacatactcatgattaaagaaggttagtcccacccttacc 14179731  T
Q  212 ttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||| ||||||||||| ||||||||||||||||| |||||||||||| ||| ||||    
T  14179730 ttatattagatgatcgaactctacaagattgctcctcttctcacaagattattct 14179676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 12 - 266
Target Start/End: Complemental strand, 14183668 - 14183414
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  14183668 ataggaaactctacctatgattattccacaacctgaacaccaattattaaactagttcatcggattatctaccctttctacaatcaattttagtttcaaa 14183569  T
Q  112 ccctaattccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatc 211  Q
    ||||||||||||||||||||||||||||||||| || |||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |    
T  14183568 ccctaattccacaacatcaaaacctattaacaagtataaggataaatcttttttcaggattacatactcatgattaaagaaggttagtcccacccttacc 14183469  T
Q  212 ttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||| |||||||||||  | | || ||||||||||| |||||||||| ||||||||    
T  14183468 ttaaattagatgatcggattttataagattgcttcacttctcacaagattcttct 14183414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 51 - 266
Target Start/End: Original strand, 24717908 - 24718123
Alignment:
Q  51 ccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaa 150  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||| |||| |||||    
T  24717908 ccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaacccgaattctgcaacatcaaaacctattgacaaatacaa 24718007  T
Q  151 ggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctctt 250  Q
    |||||||||  |||||| ||||||||| | |||||||||||| |||||||||||| |||   ||  |||   |||| ||||||||||||||||| |||||    
T  24718008 ggttaaaccccttttcaggattacatacttatgattaaagaatgttagtcccacccttactatatgttaatcgatcgaactctacaagattgctcctctt 24718107  T
Q  251 ctcacaatattcttct 266  Q
    ||||||| ||||||||    
T  24718108 ctcacaagattcttct 24718123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 23968784 - 23968632
Alignment:
Q  53 aattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaagg 152  Q
    |||||| ||| || |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  23968784 aattatcaacttaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacgactacaagg 23968685  T
Q  153 ttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccacc 205  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| ||||    
T  23968684 ttaaaccttttttcaggattacatacttatgattaaagaaggttagtctcacc 23968632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 149696 - 149601
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||||||||||||| |||| ||||||||||||||||| | || |||||||||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  149696 acctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 28652745 - 28652548
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||| ||||||||||||| || ||||||||| ||||||||| | || ||||| |||||| |||||||||  |||||||| || | | |  ||||||||||    
T  28652745 ctcttcctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatt 28652648  T
Q  120 cc-acaacatcaaaacctattaacaactacaa-ggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagat 217  Q
     | | ||||||||||| ||  ||||||||||| || |||||| |||||||  |||||||| | |||||||| |||||||||||||||| ||| |||||||    
T  28652647 tctataacatcaaaac-taacaacaactacaaaggctaaaccctttttcagaattacatacttatgattaatgaaggttagtcccacccttaccttagat 28652549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 24436675 - 24436752
Alignment:
Q  189 agaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||||||||||| |||||||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  24436675 agaaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 24436752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 24780870 - 24780788
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  24780870 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 24780788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 12626634 - 12626527
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| ||| || |||| |||||| |||||||||||| ||||| ||    || |||||||||||| |||||||||| ||||| |||||||||||||||    
T  12626634 ataggaaactcaacttatgtttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaatcaattttagtttcaaa 12626535  T
Q  112 ccctaatt 119  Q
     |||||||    
T  12626534 acctaatt 12626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 23801351 - 23801434
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaatttta 103  Q
    |||||||||| ||||||| ||||||||||||||| |||||| | || |||||||| ||| |||||||||| ||||| |||||||    
T  23801351 ctctacctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaatcaatttta 23801434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 21369329 - 21369397
Alignment:
Q  198 gtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||| ||| ||||||||||||||||  ||||||||||||||||  ||||||||||| ||||||||    
T  21369329 gtcccacccttaccttagattagatgatcggactctacaagattgctcatcttctcacaagattcttct 21369397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 1383842 - 1383771
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||| |||||||||| |||||||||||   || |||||||||||| |||||||||| |||||    
T  1383842 acctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaat 1383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 19647206 - 19647289
Alignment:
Q  135 ctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||||||||| ||||||| |||||||  |||| ||| | |||||||||||||||||||| ||||  || ||||||||    
T  19647206 ctattaacaactacaagattaaaccctttttcagaattatatacttatgattaaagaaggttagtctcacccataccttagatt 19647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 2523777 - 2523695
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  ||| |||||||||||| |||||||||||| ||| ||||    
T  2523777 attagagaaagttagtcccacccttaccttaaattagatgatcggactttacaagattgctcctcttctcacaagatttttct 2523695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 5031159 - 5031077
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| ||||||||||   ||||||||||||||||  ||||||||||| ||||||||    
T  5031159 attagagaaagttagtcccacccttaccttaaattagatgattggactctacaagattgctcatcttctcacaagattcttct 5031077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 25584352 - 25584272
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccacc 205  Q
    ||||||||||| ||| | |||| ||||||||||||| |||||||  |||| ||| ||||||||||||||||||| |||||||    
T  25584352 aacatcaaaac-tatcatcaacgacaaggttaaaccctttttcagaattatatactcatgattaaagaaggttattcccacc 25584272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 22251460 - 22251396
Alignment:
Q  202 caccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| ||| |||| |||||||||||| ||||||||||||| || |||||||||||| ||||||||    
T  22251460 cacccttaccttaaattagatgatcagactctacaagattactcctcttctcacaagattcttct 22251396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 36841267 - 36841331
Alignment:
Q  202 caccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  36841267 cacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 36841331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 9975951 - 9976033
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||| ||| ||| |||| |||||||||||  |||||||||||||| | ||||||||| || ||||||||    
T  9975951 attagagaaagttagtccaacccttaccttaaattagatgatcggactctacaagattgttcctcttctcataagattcttct 9976033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 20006049 - 20005967
Alignment:
Q  136 tattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    |||||||||| ||||  ||||||| |||||||  |||| | | |||||||||||||||| |||||||||| ||| ||||||||    
T  20006049 tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggctagtcccacccttaccttagatt 20005967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 45535903 - 45535981
Alignment:
Q  140 aacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    |||||| ||||| ||||||| |||||||  |||| | | || |||||||||||||||||||||||| ||| ||||||||    
T  45535903 aacaacaacaagattaaaccctttttcagaattatagactcgtgattaaagaaggttagtcccacccttaccttagatt 45535981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 22501993 - 22502050
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||  |||||||||||||    
T  22501993 attagagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 22509927 - 22509984
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||  |||||||||||||    
T  22509927 attagagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22509984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 20916335 - 20916399
Alignment:
Q  190 gaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctca 254  Q
    |||||||||| ||||| |||  ||| ||||||||||| | ||||||||||||||| |||||||||    
T  20916335 gaaggttagttccacccttactttaaattagatgatcgagctctacaagattgctcctcttctca 20916399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 21072877 - 21072839
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaac 62  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  21072877 acctatgattattccacaacctgaacatcaattcttaac 21072839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 31521223 - 31521273
Alignment:
Q  216 attagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||||  ||| |||||||||||| |||||||||||| ||||||||    
T  31521223 attagatgatcggactgtacaagattgctcctcttctcacaagattcttct 31521273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 4e-84; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 20 - 253
Target Start/End: Complemental strand, 12037358 - 12037125
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  12037358 ctctacctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctgatt 12037259  T
Q  120 ccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatta 219  Q
    | |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| | ||||||||| ||||||||||||||| ||| |||| ||||    
T  12037258 ctacaacatcaaaagctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaacaaggttagtcccacccttaccttatatta 12037159  T
Q  220 gatgatcaaactctacaagattgcttctcttctc 253  Q
    |||||||  ||||||| |||||||| ||||||||    
T  12037158 gatgatcggactctacgagattgctcctcttctc 12037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 21579371 - 21579154
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  21579371 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcgaaccctaattctacaacatcaaaacatattaacaactac 21579272  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||||||||| |||| ||| |||| |||||||||||  |||||||||||||||| |||    
T  21579271 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctc 21579172  T
Q  249 ttctcacaatattcttct 266  Q
    ||||||||| ||||||||    
T  21579171 ttctcacaagattcttct 21579154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 49 - 263
Target Start/End: Complemental strand, 29763033 - 29762819
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  29763033 caccaattatcaacctaattcatcgcattatctactctttctacaatcaattttagtttcaaactctaattctacaacatcaaaacttattaacaactac 29762934  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||||||||  |||| ||| |||| |||||||||||  ||||||||||||||||  ||    
T  29762933 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtttcacccttaccttaaattagatgatcggactctacaagattgctcttc 29762834  T
Q  249 ttctcacaatattct 263  Q
    ||||||||| |||||    
T  29762833 ttctcacaagattct 29762819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 22474643 - 22474812
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22474643 caccaattatcaacctaattcatcagattatctactctttcgacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 22474742  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||||||    
T  22474743 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagatt 22474812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 17978581 - 17978404
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17978581 caccaattatcaacctaattcatcggattatctgctctttctataatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 17978482  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||| | ||||||| ||||||||| | ||||||| ||||| ||||||||||| ||| ||||| ||||||||||    
T  17978481 aaggttaaatcctttttcaggattacatacttatgattatagaagtttagtcccacccttaccttagtttagatgatc 17978404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 41680294 - 41680132
Alignment:
Q  53 aattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaagg 152  Q
    |||||| ||| || ||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41680294 aattatcaacataattcatcggattatctactccttctacagtcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagg 41680195  T
Q  153 ttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttag 215  Q
    ||||||| ||| ||| ||||||||| | ||||||||||||||||||||||||| ||| |||||    
T  41680194 ttaaaccctttatcaggattacatacttatgattaaagaaggttagtcccacctttaccttag 41680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 49 - 253
Target Start/End: Original strand, 22208155 - 22208360
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22208155 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 22208254  T
Q  149 aaggttaaaccttttttcaagattaca-tagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttct 247  Q
    ||||||||||| |||||||  |||| |  |  ||| |||| |||| | |||||||||| ||| ||||||||||||||||   |||||| |||||||| ||    
T  22208255 aaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatcggtctctaccagattgctcct 22208354  T
Q  248 cttctc 253  Q
    ||||||    
T  22208355 cttctc 22208360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 266
Target Start/End: Complemental strand, 22258454 - 22258254
Alignment:
Q  67 ttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaaggttaaaccttttttc 166  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||| |||||     
T  22258454 ttcatcggattatctactctttctacaatcagttttagtttcaaaacctaattctacaacatcaaaacctatcaacaactgcaaggttaaaccctttttt 22258355  T
Q  167 aagattaca-tagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttc 265  Q
       |||| |  | |||| |||| |||| | ||||| |||| ||| |||| |||||||||||  || |||||||||||||  ||||||||||| |||||||    
T  22258354 ggaattatacaactcattattagagaaagctagtctcacccttaccttaaattagatgatcggacactacaagattgctcttcttctcacaagattcttc 22258255  T
Q  266 t 266  Q
    |    
T  22258254 t 22258254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 36405257 - 36405128
Alignment:
Q  89 ctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaa 188  Q
    ||||||| ||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||    ||||||||| | ||||||||    
T  36405257 ctacaatcaattttagtttcaaaccataattctacgacatcaaaacctattaacaactacaaggttaaacccttttcagggattacatacttatgattaa 36405158  T
Q  189 agaaggttagtcccaccattatcttagatt 218  Q
    |||| ||||||| |||| ||| ||||||||    
T  36405157 agaaagttagtcacacccttaccttagatt 36405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 22483630 - 22483737
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| ||| ||||||| |||||| |||||||||||| ||||| |||   || |||||| ||||| |||||||||| ||||| |||||||||||||||    
T  22483630 ataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaataaattttagtttcaaa 22483729  T
Q  112 ccctaatt 119  Q
     |||||||    
T  22483730 acctaatt 22483737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 18761470 - 18761552
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  18761470 attagagaaagttagtcgcacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 18761552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 19140798 - 19140868
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  19140798 tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 19140868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 36306031 - 36306101
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||| |||| ||| ||||||||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  36306031 tagtctcacccttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattcttct 36306101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 22966772 - 22966816
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaa 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttcaa 22966816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 42817937 - 42817855
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| || ||||||||| ||| |||| |||||||||||  ||||||||||||||||  ||||||||||| ||||||||    
T  42817937 attagagaaagtaagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagattcttct 42817855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 20879435 - 20879565
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatg 223  Q
    |||||||||||| ||||| ||||||||| ||||||| ||||| |  |  | ||| | ||||||||||||||||||||||||| ||| |||||||| | ||    
T  20879435 aacatcaaaacc-attaataactacaagcttaaacccttttttagaaccatatacttatgattaaagaaggttagtcccacccttaccttagattggttg 20879533  T
Q  224 a--tcaaactctacaagattgcttctcttctc 253  Q
    |  ||  |||||||||| ||||| ||||||||    
T  20879534 aattcggactctacaagtttgctcctcttctc 20879565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 23943840 - 23943774
Alignment:
Q  200 cccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||| ||| |||| ||||||||| |  |||||||||||||||| |||||||||||| ||||||||    
T  23943840 cccacccttaccttaaattagatgaccggactctacaagattgctcctcttctcacaaaattcttct 23943774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 21697550 - 21697509
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaacctttttt 165  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  21697550 aacatcaaaacctattaacaactacaatgttaaacccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 26220415 - 26220484
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  26220415 acctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 26220484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 26222537 - 26222469
Alignment:
Q  25 cctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  26222537 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 26222469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 18834456 - 18834526
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||| ||| |||| |||||||||||   | ||||||||||||  |||||||||||| ||||||||    
T  18834456 tagtcccacccttaccttaaattagatgatcgggcactacaagattgcccctcttctcacaagattcttct 18834526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 20517069 - 20517032
Alignment:
Q  181 atgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  20517069 atgattaaagaaggttagtcccacccttaccttagatt 20517032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 22345198 - 22345257
Alignment:
Q  196 tagtcccaccattatcttagattagatgat--caaactctacaagattgcttctcttctc 253  Q
    |||||||||| ||| |||||||||||||||  || |||||||||| ||||| ||||||||    
T  22345198 tagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 22345257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 22356858 - 22356917
Alignment:
Q  196 tagtcccaccattatcttagattagatgat--caaactctacaagattgcttctcttctc 253  Q
    |||||||||| ||| |||||||||||||||  || |||||||||| ||||| ||||||||    
T  22356858 tagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 22356917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 22708354 - 22708314
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatga 224  Q
    |||||||||||||||||||||| ||| |||||||| |||||    
T  22708354 attaaagaaggttagtcccacccttaccttagattggatga 22708314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 9e-82; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 49 - 266
Target Start/End: Original strand, 40230193 - 40230410
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40230193 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 40230292  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    || |||||||| ||||||||||||||||| | |||||||||||| |||||||||||| ||| |||||||||||||||  ||||||||||||||||| |||    
T  40230293 aatgttaaaccctttttcaagattacatacttatgattaaagaaagttagtcccacccttaccttagattagatgattgaactctacaagattgctcctc 40230392  T
Q  249 ttctcacaatattcttct 266  Q
    ||||||||| ||||||||    
T  40230393 ttctcacaagattcttct 40230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 33243459 - 33243267
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33243459 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 33243360  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    ||| ||||||| | ||||||||||||||| | |||||||||||| ||||||| |||| ||| |||||||||||||||   |||||||||||||    
T  33243359 aagattaaaccctatttcaagattacatacttatgattaaagaatgttagtctcacccttaccttagattagatgatgggactctacaagatt 33243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 44023768 - 44023555
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| |||||| |||    
T  44023768 caccaattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaagtac 44023669  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||||||| |||| ||| |||||||    |||||  |||||||||||||||| |||    
T  44023668 aaggttaaaccctttttcaagattacatacttatgattaaagaaggttagtcgcacccttaccttagat----tgatcggactctacaagattgctcctc 44023573  T
Q  249 ttctcacaatattcttct 266  Q
    || |||||| ||||||||    
T  44023572 ttttcacaagattcttct 44023555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 19566083 - 19565914
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19566083 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 19565984  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||| ||||| ||| ||||||||    
T  19565983 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtaccacccttaccttagatt 19565914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 46741086 - 46741263
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  46741086 caccaattatcaacctaattcatcggattatccactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaaccaattaacaactac 46741185  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  46741186 aaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtcccacacttaccttaggttagatgatc 46741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 53 - 218
Target Start/End: Original strand, 12623207 - 12623372
Alignment:
Q  53 aattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaagg 152  Q
    |||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12623207 aattatcaacctaattcatcgcattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaagg 12623306  T
Q  153 ttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||| ||||||| |||||||||   ||||||||||||||||||||||||| ||| ||||||||    
T  12623307 ttaaaccctttttcaggattacatacctatgattaaagaaggttagtcccacccttaccttagatt 12623372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 12424458 - 12424238
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  12424458 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactac 12424359  T
Q  149 aaggttaaacc--ttttttcaagattaca-tagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgctt 245  Q
    || ||||||||  ||||||||  |||| |  |  ||| |||| |||| | |||||||||| ||| |||| |||||||||||  ||||||||||||||||     
T  12424358 aaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctc 12424259  T
Q  246 ctcttctcacaatattcttct 266  Q
     ||||||||||| ||||||||    
T  12424258 ttcttctcacaagattcttct 12424238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 33186789 - 33186907
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  33186789 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccac 33186888  T
Q  149 aaggttaaaccttttttca 167  Q
    ||||||||||| |||||||    
T  33186889 aaggttaaaccctttttca 33186907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 16296733 - 16296828
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||||||||||||| |||||||||||||||||||||| | || |||||||||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  16296733 acctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatt 16296828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 266
Target Start/End: Original strand, 9638871 - 9639114
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattcc-a 122  Q
    ||||||||||| ||  |||| || ||||||||||||| |||| |||||| ||||||||||||||    |||  ||||  |  ||| || ||||||||| |    
T  9638871 acctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattccca 9638970  T
Q  123 caacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatag-tcatgattaaagaaggttagtcccaccattatcttagattaga 221  Q
     ||||||||||  ||| |||||||||||||||||||| |||||||  |||||| |  |||| |||| |||| | |||||||||| ||| |||||||||||    
T  9638971 aaacatcaaaat-tatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttagattaga 9639069  T
Q  222 tgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    | |||  ||||||||||||| || |||||||||||| ||||||||    
T  9639070 ttatcggactctacaagatttctcctcttctcacaagattcttct 9639114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 25513828 - 25513955
Alignment:
Q  140 aacaactacaaggttaaaccttttttcaagattacatag-tcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaag 238  Q
    ||||||||||| |||||||| |||||||  |||| | |  |||| |||| |||| | |||||||||||||| ||||||||||||||||| ||||||||||    
T  25513828 aacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccattaccttagattagatgatcagactctacaag 25513927  T
Q  239 attgcttctcttctcacaatattcttct 266  Q
    |||||| |||||||||||| ||||||||    
T  25513928 attgctcctcttctcacaagattcttct 25513955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 35660753 - 35660845
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    ||||||||||| |||||||||||||||||||||| | || |||||||||||| ||||||| || ||||| |||||||  ||||||||||||||    
T  35660753 tatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactctctcaacaatcaattttaaattcaaaccctaatt 35660845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 18462986 - 18463079
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| |||||||||||||||  ||||||| |||||||  |||| ||| ||||||||||||||||||||||||||| ||| ||||||||    
T  18462986 aacatcaaaac-tattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcccacctttaccttagatt 18463079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 25091675 - 25091757
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  25091675 attagagaaagttagtcccacccttaccttaaattagatgatcgaactctacaagattgctcctcttctcacaagattcttct 25091757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 53630504 - 53630422
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  53630504 attagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgttcctcttctcacaagattcttct 53630422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 19022366 - 19022448
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| ||||||||||||||||  |||||||||||||||| |||||||||||| ||| ||||    
T  19022366 attagagaaagttagtctcacctttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattattct 19022448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 42875829 - 42875901
Alignment:
Q  194 gttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||||| ||| |||| ||||||| |||| ||||||||| |||||| |||||||||||| ||||||||    
T  42875829 gttagtcccacccttaccttaaattagataatcagactctacaaaattgctcctcttctcacaagattcttct 42875901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 10356466 - 10356384
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||| | ||| |||| |||| | |||| ||||||||||||||||| |||||||||||| ||||||||    
T  10356466 attagagaaagttagtcccaaccttaccttaaattaaaagatcgaactctacaagattgctcctcttctcacaagattcttct 10356384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 14477594 - 14477687
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||| ||| |||||||| | ||||| |||||||  |||| ||| ||||||||||||||||||||| ||||| ||| ||||||||    
T  14477594 aacatcaaaac-tatcaacgactacaagatcaaaccctttttcagaattatatactcatgattaaagaaggttagtgccacccttaccttagatt 14477687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 14549515 - 14549583
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    ||||||||||| |||||||||||||||||||||| | || |||||| |||||  ||||||||| |||||    
T  14549515 tatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaat 14549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 20150787 - 20150831
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaa 168  Q
    |||||||||||||||||||||||||||||||||| | ||||||||    
T  20150787 aacatcaaaacctattaacaactacaaggttaaatcctttttcaa 20150831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 26921584 - 26921496
Alignment:
Q  140 aacaactacaag-gttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatca 227  Q
    |||||||||||  |||||||| |||||||  |||||||| | |||||||| |||||||||||| ||| ||| ||||| |||||||||||    
T  26921584 aacaactacaaatgttaaaccctttttcagaattacatacttatgattaatgaaggttagtcctacccttaccttaggttagatgatca 26921496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 19434849 - 19434778
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||| |||||||||||||||||||||    || |||||| ||||| |||||||||| |||||    
T  19434849 acctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaat 19434778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 13165095 - 13165188
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| |||||||||||| ||  |||| || |||||||  ||   ||| ||||||||||||||||||||||||||| ||| ||||||||    
T  13165095 aacatcaaaac-tattaacaactataaaattaacccctttttcacaatcctatactcatgattaaagaaggttagtcccacccttaccttagatt 13165188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 19610346 - 19610428
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  | ||||||||||| || |||||||||||| ||||||||    
T  19610346 attagagaaagttagtctcacccttaccttaaattagatgatcggattctacaagattactcctcttctcacaagattcttct 19610428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 14281113 - 14281182
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  14281113 acctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 14281182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 10694264 - 10694193
Alignment:
Q  195 ttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||| |||| ||| |||| |||||||||||  ||||||||||||||||  ||||||||| | ||||||||    
T  10694264 ttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacgagattcttct 10694193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 10908030 - 10907959
Alignment:
Q  195 ttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||| |||| ||| |||| |||||||||||  ||||||||||||||||  ||||||||| | ||||||||    
T  10908030 ttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacgagattcttct 10907959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 26014285 - 26014348
Alignment:
Q  163 tttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    |||||| || ||||| ||| |||||  |||||||||||||||| ||| ||||||||||||||||    
T  26014285 tttcaaaatcacatactcaagattattgaaggttagtcccacccttaccttagattagatgatc 26014348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 54798093 - 54798024
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||  |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  54798093 acctatgattattctacaatatgaacaccacctattactttaattcatcagattatctactctttctaca 54798024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 15119472 - 15119255
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  15119472 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaatctattaacaactac 15119373  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||| ||| ||| ||||| |||   |||||||||||||||||||||| |||    
T  15119372 aaggttaaaccctttttcaagattacatacttatgattaaagaaggttagtcctacccttaccttaggttaatcgatcaaactctacaagattgctcctc 15119273  T
Q  249 ttctcacaatattcttct 266  Q
    ||||||||||||||||||    
T  15119272 ttctcacaatattcttct 15119255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 14161021 - 14160804
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||| ||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14161021 caccaagtatcaacctaattcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 14160922  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    |||||||||||  |||||| ||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||| |||    
T  14160921 aaggttaaaccccttttcaggattacatacttatgattaaagaaggttagtcccacccttatcttaaattagatgatcggactctacaagattgctcctc 14160822  T
Q  249 ttctcacaatattcttct 266  Q
    ||| ||||| ||||||||    
T  14160821 ttcacacaagattcttct 14160804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 43276909 - 43276692
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43276909 caccaattatcaacctaattcatcggattatttactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 43276810  T
Q  149 aaggttaaaccttttttcaagattaca-tagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttct 247  Q
    |||||||||||  ||||||  |||| |  |  ||| |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| ||    
T  43276809 aaggttaaacc-attttcagaattatacaacccattattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcct 43276711  T
Q  248 cttctcacaatattcttct 266  Q
    |||||||||| ||||||||    
T  43276710 cttctcacaagattcttct 43276692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 14317959 - 14318128
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  14317959 caccaattatcaaccaaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactgc 14318058  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||||| |||||||| ||| ||||||||    
T  14318059 aaggttaaaccctttttcaggattacatacttatgattaaagaaggtttgtcccacccttaccttagatt 14318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 9743244 - 9743093
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  9743244 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaacaactac 9743145  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtc 200  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||    
T  9743144 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtc 9743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 8513920 - 8513701
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactcttt-ctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaacta 147  Q
    |||||||||| |||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  8513920 caccaattatcaacctaattcttcggattatctactcttttctacaattagttttagtttcaaaccctaattctacagcatcaaaacctataaacaacta 8513821  T
Q  148 caaggttaaaccttttttcaagattaca-tagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttc 246  Q
    |||||||||||| ||||| |  |||| |  |  ||| |||| |||| |||||||||||| ||| ||||| |||   |||| |||| |||||||||| |      
T  8513820 caaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcgatcgaactttacaagattgttct 8513721  T
Q  247 tcttctcacaatattcttct 266  Q
    | ||||||||| ||||||||    
T  8513720 tattctcacaagattcttct 8513701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 19282904 - 19282995
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    |||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||||| |||||||||| ||||| ||||||| |||||||    
T  19282904 ctctacctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactctttcaacaatcaattttaatttcaaa 19282995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 13315275 - 13315176
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||||||||||||||||| |||||||||||||||||||||  | || ||||| || ||| |||||||||| ||||| ||||||| ||||||| |||||||    
T  13315275 ctctacctatgattattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaacaatcaattttaatttcaaaacctaatt 13315176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 38295452 - 38295543
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaatttta 103  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||| | || |||||||||||| |||||||| | ||||| |||||||    
T  38295452 ataggaaactctacctatgattattctacatcctgaacaccaattattaccttacttcatcggattacctactcttgcaacaatcaatttta 38295543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 12465290 - 12465208
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  12465290 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 12465208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 8851189 - 8851107
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  ||||||||||||||||  ||||||||||| ||||||||    
T  8851189 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacaagattcttct 8851107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 11067490 - 11067572
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  |||||| ||||||||| |||||||||||||||||||||    
T  11067490 attagagaaagttagtctcacccttaccttaaattagatgatcggactctataagattgctcctcttctcacaatattcttct 11067572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 12372296 - 12372378
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||| ||||| ||||||||    
T  12372296 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttcacacaagattcttct 12372378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 13147502 - 13147420
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| ||||  ||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  13147502 attagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctcctcttctcacaagattcttct 13147420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 32433619 - 32433537
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  32433619 attagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 32433537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 47975079 - 47975010
Alignment:
Q  26 ctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||| |||||||||||||||||||||| | || |||||||||||| ||| |||||| |||||    
T  47975079 ctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaat 47975010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 266
Target Start/End: Complemental strand, 8488197 - 8488042
Alignment:
Q  112 ccctaattccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattaca-tagtcatgattaaagaaggttagtcccaccattat 210  Q
    ||||||||| ||| ||||||||||||| |||||||| ||||||||||| ||||| |  |||| |  |  ||| |||| |||| |||||||||||| |||     
T  8488197 ccctaattctacagcatcaaaacctataaacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttac 8488098  T
Q  211 cttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||| |||   |||| |||| |||||||||| |  ||||||||||| ||||||||    
T  8488097 cttaggttaatcgatcgaactttacaagattgttcttcttctcacaagattcttct 8488042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 12754855 - 12754784
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||| ||||||||||||||||||||||   || |||||| ||||| |||||||||| |||||    
T  12754855 acctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaat 12754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 58431 - 58361
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||| ||| ||||||||||||||||  | |||||||||||| | |||||||||||| ||||||||    
T  58431 tagtcccacccttaccttagattagatgatcggaatctacaagattgttcctcttctcacaagattcttct 58361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 12322960 - 12322878
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||| ||||| ||| |||| |||||||||||  |||||||||||||||| || ||||||||| ||||||||    
T  12322960 attagagaaagttagttccacccttaccttaaattagatgatcggactctacaagattgctccttttctcacaagattcttct 12322878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 16999458 - 16999540
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  ||||||||||||| || |||||||||||| ||||||||    
T  16999458 attagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattactcctcttctcacaagattcttct 16999540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 42565907 - 42565829
Alignment:
Q  140 aacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    |||||||||||| ||||||| |||||||  |||| ||| | ||||||||||||| |||||| |||| ||| ||||||||    
T  42565907 aacaactacaagattaaaccctttttcagaattatatatttatgattaaagaagattagtctcacccttaccttagatt 42565829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 48274349 - 48274415
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    ||||||||||| ||||| ||||||||| ||||||   || |||||| ||||||||||||||||||||    
T  48274349 tatgattattctacaacatgaacaccacttattactttaattcatcagattatctactctttctaca 48274415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 12127193 - 12127124
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctc 253  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||   |||||| |||||||| ||||||||    
T  12127193 attagagaaagttagtcccacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 12127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 19283083 - 19283160
Alignment:
Q  189 agaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| ||||||| |||| ||| |||| |||||||||||  ||||||||||||| || || ||||||||| ||||||||    
T  19283083 agaaagttagtctcacccttaccttaaattagatgatcggactctacaagattactccttttctcacaagattcttct 19283160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 37539465 - 37539541
Alignment:
Q  179 tcatgattaaagaaggttagtcccaccattatcttagattagatgat--caaactctacaagattgcttctcttctc 253  Q
    ||||||||| |||| |||||||||||| |||  ||||||||||||||  || |||||||||| ||||| ||||||||    
T  37539465 tcatgattatagaatgttagtcccacccttactttagattagatgattacagactctacaagcttgctcctcttctc 37539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 16214535 - 16214578
Alignment:
Q  223 gatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||    
T  16214535 gatcgaactctacaagattgctcctcttctcacaagattcttct 16214578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 19195628 - 19195691
Alignment:
Q  179 tcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattg 242  Q
    |||| |||| |||| | |||||||||| ||| ||||||||||||||||  ||||||||||||||    
T  19195628 tcattattagagaaagctagtcccacccttaccttagattagatgatcggactctacaagattg 19195691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 32160191 - 32160148
Alignment:
Q  223 gatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||    
T  32160191 gatcgaactctacaagattgctcctcttctcacaagattcttct 32160148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 33060455 - 33060494
Alignment:
Q  179 tcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  33060455 tcatgattaaagaaggttagtcccacccttaccttagatt 33060494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 12754642 - 12754561
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| ||||| |||   |||  ||||||||||||||||| |||||||||||| ||||||||    
T  12754642 attagagaaagttagtcccacccttaccttaggttaatcgat-gaactctacaagattgctcctcttctcacaagattcttct 12754561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 10063090 - 10063021
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || ||||||  |||||||||||||||||||    
T  10063090 acctatgattattctacaacatgaacaccacctattactttaattcatcaaattatctactctttctaca 10063021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 708711 - 708675
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattatta 60  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  708711 acctatgattattctacaacctaaacaccaattatta 708675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 13744528 - 13744469
Alignment:
Q  196 tagtcccaccattatcttagattagatgat--caaactctacaagattgcttctcttctc 253  Q
    |||||||||| ||| |||||||||||||||  || |||||||||| ||||| ||||||||    
T  13744528 tagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 13744469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 21661278 - 21661318
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatga 224  Q
    |||||||||||||||||||||| ||| |||||| |||||||    
T  21661278 attaaagaaggttagtcccacccttaccttagactagatga 21661318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 38299782 - 38299841
Alignment:
Q  196 tagtcccaccattatcttagattagatga--tcaaactctacaagattgcttctcttctc 253  Q
    |||||||||| ||| ||||||||||||||  ||| |||||||||| ||||| ||||||||    
T  38299782 tagtcccacccttaccttagattagatgatttcagactctacaagcttgctcctcttctc 38299841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 47974850 - 47974770
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattctt 264  Q
    |||| |||| ||||||| |||| ||| ||||| |||   |||| |||||||||| |||||| |||||||||||| ||||||    
T  47974850 attagagaaagttagtctcacccttaccttaggttaatcgatcgaactctacaatattgctcctcttctcacaagattctt 47974770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 53646224 - 53646032
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53646224 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 53646125  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  53646124 aaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtcccacccttaccttagattagatgatcagactctacaagatt 53646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 49 - 205
Target Start/End: Complemental strand, 54330472 - 54330316
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  54330472 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 54330373  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccacc 205  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||| ||||||||||||    
T  54330372 aaggttaaaccctttttcaggattacatacttatgattaaagaaagttagtcccacc 54330316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 14152565 - 14152347
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  14152565 caccaattatcaacctaattcatcggattatctactctttatacaatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaactac 14152466  T
Q  149 aaggttaaaccttttttcaagat--tacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttc 246  Q
    ||||||||||| |||||||  ||  |||| | |||| |||| |||| | |||||||||| ||| ||||| |||   |||| |||| |||||||||||| |    
T  14152465 aaggttaaaccctttttcagaatgataca-actcattattagagaaagctagtcccacccttaccttaggttaatggatcgaactatacaagattgctcc 14152367  T
Q  247 tcttctcacaatattcttct 266  Q
    ||||||||||| ||||||||    
T  14152366 tcttctcacaagattcttct 14152347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 5215533 - 5215651
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| ||| ||  ||||||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  5215533 caccaattatcaacataagtcatcggattatctactctatctacaatcaattttagttttaaaccctaattctacaacatcaaaacctattaataactac 5215632  T
Q  149 aaggttaaaccttttttca 167  Q
    ||||||||||| |||||||    
T  5215633 aaggttaaaccctttttca 5215651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 50350872 - 50350764
Alignment:
Q  158 ccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaa 257  Q
    ||||||||||  |||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||| | || | ||||||||||||    
T  50350872 ccttttttcagaattatatactcatgattaaagaaggttagtcccacccttaccttagattagatgatcggactctacaacactgttcctcttctcacaa 50350773  T
Q  258 tattcttct 266  Q
     ||||||||    
T  50350772 gattcttct 50350764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 12917515 - 12917416
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||| | || |||||||||||| ||||| || | ||||| ||||||| |||||||    
T  12917515 ataggaaactctacctatgattattttacaacctgaacaccaattattaccttacttcatcggattacctacttttccaacaatcaattttaatttcaaa 12917416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 17541456 - 17541538
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  17541456 attagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctcctcttctcacaagattcttct 17541538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 15566399 - 15566486
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacct 136  Q
    |||||||||| |||||| |||||| ||||||||||| ||||||| || ||||||||||| |||||||||||  || ||||||||||||    
T  15566399 caccaattatcaacctaattcatcagattatctactatttctacgatcaattttagttttaaaccctaattttaccacatcaaaacct 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 45803539 - 45803432
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| ||| ||||||| |||||| |||||||| ||| ||||| |||   || |||||||||||| |||||||||| ||||| |||||||||||||||    
T  45803539 ataggaaactcaacctatgtttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaacaatcaattttagtttcaaa 45803440  T
Q  112 ccctaatt 119  Q
     |||||||    
T  45803439 acctaatt 45803432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 21845741 - 21845648
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||  | || ||| | ||||||||||||||||||||||||| ||| ||||||||    
T  21845741 aacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatacttatgattaaagaaggttagtcccacccttaccttagatt 21845648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 22306613 - 22306531
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  22306613 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 22306531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 48631294 - 48631387
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||  | || ||| | ||||||||||||||||||||||||| ||| ||||||||    
T  48631294 aacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatatttatgattaaagaaggttagtcccacccttaccttagatt 48631387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 17047148 - 17047230
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  ||||||||||||| || |||||||||||| ||||||||    
T  17047148 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattactcctcttctcacaagattcttct 17047230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 41172396 - 41172319
Alignment:
Q  189 agaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||||||||||| ||| |||| |||||||||||| ||||||||||||||||  |||| |||||| ||||||||    
T  41172396 agaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctcatcttgtcacaagattcttct 41172319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 6805114 - 6805046
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    ||||||||||| |||||||||||||||||||||| | || |||||| ||||| |||||||||| |||||    
T  6805114 tatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 6805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 15566706 - 15566748
Alignment:
Q  125 acatcaaaacctattaacaactacaaggttaaaccttttttca 167  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttca 15566748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 17044988 - 17045070
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  ||||||||||||| ||  ||||||||||| ||||||||    
T  17044988 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattactcatcttctcacaagattcttct 17045070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 3160706 - 3160623
Alignment:
Q  135 ctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    |||| ||||||||||| ||||||||  |||| |  |||| ||| |||||||||||||||||||||| |||| ||| ||||||||    
T  3160706 ctatcaacaactacaaagttaaacccatttttagaattatatactcatgattaaagaaggttagtctcacccttaccttagatt 3160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 11259453 - 11259535
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| ||||||| |||  |||||||||||||||| |||||||| ||| ||||||||    
T  11259453 attagagaaagttagtctcacccttaccttaaattagataatcggactctacaagattgctcctcttctcgcaagattcttct 11259535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 15931538 - 15931456
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||| ||||||  ||||||||||||| || |||||||||||| ||||||||    
T  15931538 attagagaaagttagtctcacctttaccttaaattaaatgatcggactctacaagattactcctcttctcacaagattcttct 15931456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 17694089 - 17694171
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| |||  ||| |||||||||||  |||||||||||||||| |||||||| ||| ||||||||    
T  17694089 attagagaaagttagtctcacccttacattaaattagatgatcggactctacaagattgctcctcttctcgcaagattcttct 17694171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 35354624 - 35354706
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||  ||| |||| ||||||||||   |||||||||||||||| ||||| |||||| ||||||||    
T  35354624 attagagaaagttagtcccacacttagcttaaattagatgattggactctacaagattgctcctcttatcacaagattcttct 35354706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 17539138 - 17539210
Alignment:
Q  194 gttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||||| |||| ||| |||| |||||||||||  | ||||||||||| || |||||||||||| ||||||||    
T  17539138 gttagtctcacccttaccttaaattagatgatcggattctacaagattactcctcttctcacaagattcttct 17539210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 14641739 - 14641676
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctt 87  Q
    ||||||||||| ||  |||| || ||||||||||||| |||| |||||| ||||||||||||||    
T  14641739 acctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactctt 14641676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 11563747 - 11563789
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||    
T  11563747 attagagaaggttagtcccacccttaccttagattagatgatc 11563789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 18890287 - 18890325
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaac 62  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  18890287 acctatgattattccacaacctgaacatcaattcttaac 18890325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 45530622 - 45530553
Alignment:
Q  194 gttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattctt 264  Q
    |||||||||| | ||| |||| |||||||||||  |||||||||||||||| || ||||||||| ||||||    
T  45530622 gttagtcccatc-ttaccttaaattagatgatcggactctacaagattgctccttttctcacaagattctt 45530553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 10551167 - 10551236
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || | |||| ||||||||||||||||||||    
T  10551167 acctatgattattctacaacatgaacaccacctattactttaatccatcagattatctactctttctaca 10551236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 14508733 - 14508778
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaa 94  Q
    |||||||||| || ||| |||||| |||||||||||||||||||||    
T  14508733 caccaattatcaatctaattcatcagattatctactctttctacaa 14508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 16643935 - 16643984
Alignment:
Q  13 taggaagctctacctatgattattccacaacctgaacaccaattattaac 62  Q
    |||||||||  |||||||||||||| |||||||||||| ||||| |||||    
T  16643935 taggaagcttaacctatgattattctacaacctgaacatcaattcttaac 16643984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 21619245 - 21619314
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||| ||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  21619245 acctatgattcttctacaacatgaacaccacctattactttaattcatctgattatctactctttctaca 21619314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 36167394 - 36167463
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||| ||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  36167394 acctatgattcttctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 36167463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 6003207 - 6003247
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatga 224  Q
    |||||||||||||||||||||| ||| |||||||| |||||    
T  6003207 attaaagaaggttagtcccacccttaccttagattggatga 6003247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 12155058 - 12155030
Alignment:
Q  181 atgattaaagaaggttagtcccaccatta 209  Q
    |||||||||||||||||||||||||||||    
T  12155058 atgattaaagaaggttagtcccaccatta 12155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 49 - 264
Target Start/End: Original strand, 26762289 - 26762504
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26762289 caccaattatcaacctaattcatcgaattatttactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 26762388  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||| |||   |||| |||||||||||||||||||||    
T  26762389 aaggttaaaccctttttcaggattacataattatgattaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgcttctc 26762488  T
Q  249 ttctcacaatattctt 264  Q
    ||||||||| ||||||    
T  26762489 ttctcacaagattctt 26762504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 14025972 - 14025795
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||  |||||||||||| ||||||||||||||    
T  14025972 caccaattatcaacctaattcatcggattatctactctttctacgatcaattgtagtttcaaaccctaattatacaacatcaaaatctattaacaactac 14025873  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14025872 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagattagatgatc 14025795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 49 - 253
Target Start/End: Complemental strand, 8504053 - 8503849
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8504053 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 8503954  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||  || |||| ||||||||| | |||||| |||||||||||||||||| ||| |||| ||||||| |||   |||||| |||||||| ||     
T  8503953 aaggttaaactcttgttcaggattacatacttatgattgaagaaggttagtcccacccttaccttatattagataatcggtctctacgagattgctccta 8503854  T
Q  249 ttctc 253  Q
    |||||    
T  8503853 ttctc 8503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 8833371 - 8833194
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  8833371 caccaattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactat 8833272  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||| ||||||||| ||| | ||| ||||||||||    
T  8833271 aaggttaaaccctttttcaggattacatacttatgattaaagaaggtcagtcccacccttaccctaggttagatgatc 8833194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 26749919 - 26750095
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||  || ||||||||||| || ||||||||| ||||||||||||| |||||||||||||    
T  26749919 caccaattatcaacctaattcatcggattatctactctttctatgatcaattttagttttaa-ccctaattctacaacatcaaaacttattaacaactac 26750017  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    |||||||||||  |||||| ||||| ||| | ||||||||| |||||||||| |||| ||| ||||| ||||||||||    
T  26750018 aaggttaaaccccttttcaggattatatacttatgattaaaaaaggttagtctcacccttaccttaggttagatgatc 26750095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 1627023 - 1626910
Alignment:
Q  109 aaaccctaattccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccatt 208  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||| |||| ||    
T  1627023 aaactctaattttacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcacaccctt 1626924  T
Q  209 atcttagattagat 222  Q
    | ||||| ||||||    
T  1626923 accttaggttagat 1626910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 266
Target Start/End: Complemental strand, 23199297 - 23199155
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtc-atgattaaagaaggttagtcccaccattatcttagattagat 222  Q
    ||||||||||| || ||||||||||||||||||||| |||||||  |||| | |  | || |||| |||| | |||||||||| ||| |||| |||||||    
T  23199297 aacatcaaaac-tactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagat 23199199  T
Q  223 gatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||  ||||||||||||||||  ||||||||||| ||||||||    
T  23199198 gatcggactctacaagattgctcttcttctcacaagattcttct 23199155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 21503989 - 21504232
Alignment:
Q  12 ataggaagctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||| ||| |||||||||||||| |||||||||||| || || |||   || ||||| |||| | |||||||||| ||||| |||||     |  ||    
T  21503989 ataggaaactcaacctatgattattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaatgaatttgcaaatttaa 21504088  T
Q  112 ccctaattcc-acaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattat 210  Q
    |||||||| | | ||||||||||| || ||||||||||||  ||||||| |||||||  |  | ||| | ||||||||||||||||||||||||| |||     
T  21504089 ccctaatttctataacatcaaaac-tactaacaactacaaacttaaaccctttttcagaaccatatacttatgattaaagaaggttagtcccacctttac 21504187  T
Q  211 cttagattagatga--tcaaactctacaagattgcttctcttctc 253  Q
    |||||||| | |||  ||  |||||||||| ||||| ||||||||    
T  21504188 cttagattggttgaattcggactctacaagcttgctcctcttctc 21504232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 21398659 - 21398592
Alignment:
Q  199 tcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||||| ||| ||||||||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  21398659 tcccacccttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattcttct 21398592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 24068191 - 24068235
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaa 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttcaa 24068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 36508933 - 36508862
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||| ||||||| |||||||||||||| | || |||||| ||||| |||||||||| |||||    
T  36508933 acctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaat 36508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 21300074 - 21300017
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  21300074 attagagaaagttagtcccacccttaccttagattagatgatcagactctacaagatt 21300017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 18318391 - 18318322
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  18318391 acctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 18318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 20765436 - 20765367
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||| | ||||||||| ||||||   || |||||| ||||||||||||||||||||    
T  20765436 acctatgattattctacatcatgaacaccacttattactttaattcatcagattatctactctttctaca 20765367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 21398862 - 21398805
Alignment:
Q  149 aaggttaaacc-ttttttcaagattacatagtcatgattaaagaaggttagtcccacc 205  Q
    ||||||||||| ||||||||  |||| | | |||||||||||||||||||||||||||    
T  21398862 aaggttaaacccttttttcagaattatacactcatgattaaagaaggttagtcccacc 21398805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 10611 - 10394
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10611 caccaattatcaacctaattcatcgtattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 10512  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    || |||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||| |||   |||| ||||||||||||||||| |||    
T  10511 aatgttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgctcctc 10412  T
Q  249 ttctcacaatattcttct 266  Q
    ||||||||| ||| ||||    
T  10411 ttctcacaagattattct 10394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 266
Target Start/End: Original strand, 3864 - 3978
Alignment:
Q  152 gttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttc 251  Q
    |||||| | ||||||| ||||||||| | ||| |||||||||||| ||| |||| ||| ||||| |||   |||| ||||||| |||||||||  |||||    
T  3864 gttaaatcctttttcaggattacatacttatgtttaaagaaggttggtcacacccttaccttaggttaatcgatcgaactctataagattgctcatcttc 3963  T
Q  252 tcacaatattcttct 266  Q
    |||||| ||||||||    
T  3964 tcacaagattcttct 3978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 23431612 - 23431420
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  23431612 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattagcaactac 23431513  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||  ||| ||||||||||||||||  |||||||||||||    
T  23431512 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacgcttaccttagattagatgatcggactctacaagatt 23431420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 253
Target Start/End: Original strand, 25921864 - 25922092
Alignment:
Q  25 cctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccaca 124  Q
    ||||||||||||| ||||||||||||||||| |||| | || |||||| |||||| ||||||||||||||| ||||||||||||||||| |||||| |||    
T  25921864 cctatgattattctacaacctgaacaccaatcattaccttaattcatcagattatttactctttctacaatcaattttagtttcaaaccttaattctaca 25921963  T
Q  125 acatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatga 224  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||||||||| | ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  25921964 acatcaaaacctattaacaactacaaggttaaacccttttttaggattacatacttatgattaaataaggttagtcccacccttaccttagattagatga 25922063  T
Q  225 tcaaactctacaagattgcttctcttctc 253  Q
    ||   |||||| |||||||| ||||||||    
T  25922064 tcggtctctacgagattgctcctcttctc 25922092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 49 - 264
Target Start/End: Original strand, 31734594 - 31734809
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||| |    
T  31734594 caccaattatcaaccaaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattttacaacatcaaaacctattaacaactgc 31734693  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| |||||||  |||||||| | ||||||||||||||||||||||||| ||| ||||| |||   |||| ||||||||||||||||| |||    
T  31734694 aaggttaaaccctttttcagaattacatacttatgattaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgctcctc 31734793  T
Q  249 ttctcacaatattctt 264  Q
    ||||||||| ||||||    
T  31734794 ttctcacaagattctt 31734809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 18455238 - 18455060
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  18455238 caccaattatcaacctaattcatcggattatctactctttctactatcaattctagtttcaaaccctaattctacaatatcaaaacctattaacaactac 18455139  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatca 227  Q
    ||||||||| | ||||||| ||||||||| | ||||||||||||||||| ||||||| ||| ||||| |||||||||||    
T  18455138 aaggttaaaacctttttcaggattacatacttatgattaaagaaggttactcccacccttaccttaggttagatgatca 18455060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 22557135 - 22557311
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  22557135 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaacccgaattctacaacatcaaaacctattaacaactac 22557234  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | |||| |||||||||||| ||||||| ||| ||||| ||||||||||    
T  22557235 aaggttaaaccctttttcaggattacatacttatga-taaagaaggttactcccacccttaccttaggttagatgatc 22557311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 7217408 - 7217232
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||  | |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  7217408 caccaattatcaactgaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaa-cctattaacaactac 7217310  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||||||||| |||| ||| |||||  |||||||||    
T  7217309 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtctcacccttaccttaggctagatgatc 7217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 32259732 - 32259901
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||| ||||||    
T  32259732 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaaaaactac 32259831  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||  ||||||| ||||||||| | |||||||||||||||||||| |||| ||| || |||||    
T  32259832 aaggttaaactctttttcaggattacatacttatgattaaagaaggttagtcacacccttacctaagatt 32259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 23657986 - 23658093
Alignment:
Q  60 aacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaaggttaaacc 159  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  23657986 aacctaattcatcggattatctactctttctacaatcaattttagtttcaaacccttattctacaacatcaaaacctattaacaactacaaggttaaacc 23658085  T
Q  160 ttttttca 167  Q
     |||||||    
T  23658086 ctttttca 23658093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 29045122 - 29045221
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||    
T  29045122 ctctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatt 29045221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 1818915 - 1819045
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatg 223  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||  | || ||| |||||||||||||||||||||| |||| ||| |||||||| | ||    
T  1818915 aacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcacccttaccttagattggttg 1819013  T
Q  224 a--tcaaactctacaagattgcttctcttctc 253  Q
    |  ||| |||||| ||| ||||| ||||||||    
T  1819014 aattcagactctataagcttgctcctcttctc 1819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 7827994 - 7828076
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  7827994 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 7828076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 17318184 - 17318114
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  17318184 tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 17318114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 23150317 - 23150235
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||| ||||    
T  23150317 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatttttct 23150235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 19655261 - 19655179
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  ||||||||||||||||  ||||||||||| ||||||||    
T  19655261 attagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacaagattcttct 19655179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 13285765 - 13285841
Alignment:
Q  179 tcatgattaaagaaggttagtcccaccattatcttagattagatg--atcaaactctacaagattgcttctcttctc 253  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||   ||| |||||||||| ||||| ||||||||    
T  13285765 tcatgattatagaaggttagtcccacccttaccttagattagatggtttcagactctacaagcttgctcctcttctc 13285841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 20410525 - 20410460
Alignment:
Q  201 ccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  20410525 ccacccttaccttaaattagatgatcgcactctacaagattgctcctcttctcacaagattcttct 20410460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 27125507 - 27125428
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattct 263  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  ||||||||||||||||  ||||||||||| |||||    
T  27125507 attagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacaaaattct 27125428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 18703590 - 18703672
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||  ||| |||| |||||||||||  |||||||||||||| | ||||||||| || ||||||||    
T  18703590 attagagaaagttagtcccacacttaccttaaattagatgatcggactctacaagattgttcctcttctcataagattcttct 18703672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 18709525 - 18709607
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||  ||| |||| |||||||||||  |||||||||||||| | ||||||||| || ||||||||    
T  18709525 attagagaaagttagtcccacacttaccttaaattagatgatcggactctacaagattgttcctcttctcataagattcttct 18709607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 16447961 - 16447892
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  16447961 acctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 16447892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 21120013 - 21119944
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  21120013 acctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 21119944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 34140529 - 34140415
Alignment:
Q  140 aacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgat--caaactctacaa 237  Q
    |||||||||||| |||||||   |||||| |||| | |  ||| |||| |||| | |||||||||| ||| |||||||||||||||  ||||||||||||    
T  34140529 aacaactacaagattaaaccagatttcaaaattataaacccattattagagaa-gctagtcccacccttaccttagattagatgattacaaactctacaa 34140431  T
Q  238 gattgcttctcttctc 253  Q
    | ||||| ||||||||    
T  34140430 gcttgctcctcttctc 34140415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 34153090 - 34153031
Alignment:
Q  196 tagtcccaccattatcttagattagatgat--caaactctacaagattgcttctcttctc 253  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||| ||||| ||||||||    
T  34153090 tagtcccacccttaccttagattagatgattacaaactctacaagcttgctcctcttctc 34153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 25601515 - 25601326
Alignment:
Q  25 cctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattcc-ac 123  Q
    ||||||||||||  ||||| |||||| ||||||||| | || ||| | |||||| |||||||||  |||||||| || | | |  |||||||||| | |     
T  25601515 cctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaattaaattcaatct--aaccctaatttctat 25601418  T
Q  124 aacatcaaaacctattaacaactacaa-ggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||| |||||    |||||||||||| ||||||||| |||||||  |||||||  | |||||||| ||||||||||| | || ||| ||||||||    
T  25601417 aacatgaaaac----taacaactacaaaggttaaaccctttttcagaattacattcttatgattaatgaaggttagtctctcccttaccttagatt 25601326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 19102669 - 19102600
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||| ||||||||||||    
T  19102669 acctatgattattctacaacatgaacaccacctattactttaattcatcagattatccactctttctaca 19102600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 18459302 - 18459362
Alignment:
Q  158 ccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||  || | ||| |||||||||||| |||||||||||||| ||| ||||||||    
T  18459302 ccttttttcagaatcatatactcatgattaaagtaggttagtcccacccttaccttagatt 18459362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 8e-70; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 41225619 - 41225402
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||| ||||| |    
T  41225619 caccaattatcaaccaaattcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgc 41225520  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| |||| |||||||||||  |||| ||||||||||| |||    
T  41225519 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctcctc 41225420  T
Q  249 ttctcacaatattcttct 266  Q
    ||||||||| ||||||||    
T  41225419 ttctcacaagattcttct 41225402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 41226872 - 41226655
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||| ||||| |    
T  41226872 caccaattatcaaccaaattcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgc 41226773  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctc 248  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| |||| |||||||||||  |||| ||||||||||| |||    
T  41226772 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctcctc 41226673  T
Q  249 ttctcacaatattcttct 266  Q
    ||||||||| ||||||||    
T  41226672 ttctcacaagattcttct 41226655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 44892336 - 44892513
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  44892336 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaatatcaaaacctattaacaactac 44892435  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  44892436 aaggttaaatcctttttcaagattacatacttatgattaaagaaggttagtcccacccttaacttaggttagatgatc 44892513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 14792728 - 14792551
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  14792728 caccaattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcgaaacctattaacaactac 14792629  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  14792628 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatc 14792551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 18121490 - 18121667
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||| ||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18121490 caccaattatcaacctaattcatcggattatctactctttttacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactac 18121589  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||| | ||||||| ||||||||| | ||||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  18121590 aaggttaaatcctttttcaggattacatacttatgattaaagaaggttaatcccacccttaccttaggttagatgatc 18121667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 38887252 - 38887074
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||| | ||||||||||||||||| || | |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38887252 caccaattatcaacctaattcatcagtttatctactctttctacgatcacttttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 38887153  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatca 227  Q
    ||| ||||||| ||||||| ||||||||| | |||||||||||||||||||  |||| ||| ||||| |||||||||||    
T  38887152 aagattaaaccctttttcaggattacatacttatgattaaagaaggttagtttcacccttaccttaggttagatgatca 38887074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 225
Target Start/End: Complemental strand, 21243931 - 21243746
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||       ||||    
T  21243931 ctctgcctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactctttctacaatcaattttagtttc-------aatt 21243839  T
Q  120 ccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccatta-tcttagatt 218  Q
                  |||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||| |||| |||  ||||||||    
T  21243838 --------------cctattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtctcacccttacccttagatt 21243753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 17901996 - 17901905
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    |||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  17901996 ctctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaacaatcaattttagtttcaaa 17901905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 21239237 - 21239146
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    |||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  21239237 ctctacctatgattattctacaaactgaacaccaattattaccttagttcatcggattacctactctttcaacaatcaattttagtttcaaa 21239146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 6834024 - 6834126
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagt---tcatcggattatctactctttctacaattaattttagtttcaaacccta 116  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||   ||||||||||| |||||||||| ||||| ||||||||||||||| ||||    
T  6834024 ctctacctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattacctactctttcaacaatcaattttagtttcaaaaccta 6834123  T
Q  117 att 119  Q
    |||    
T  6834124 att 6834126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 8306466 - 8306561
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    |||||||||||||| |||| ||||||||||||||||| | || |||||||||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  8306466 acctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatt 8306561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 39061283 - 39061375
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagat 217  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||  |||| ||| ||||||||| ||||||||||||||||  ||| |||||||    
T  39061283 aacatcaaaac-tatcaacaactacaaggttaaaccttttttcagaattatatactcatgattacagaaggttagtcccactcttaccttagat 39061375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 19676733 - 19676815
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  19676733 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 19676815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 20633651 - 20633579
Alignment:
Q  194 gttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||||| |||||||| |||||||||||  ||||||||||||||||  ||||||||||| ||||||||    
T  20633651 gttagtcccacccttatcttaaattagatgatcggactctacaagattgctcatcttctcacaagattcttct 20633579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 35894964 - 35895048
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    |||||||||||||| ||||||||||||||||||| | || |||||||||||| | | |||||| ||||| ||||||| |||||||    
T  35894964 tatgattattccaccacctgaacaccaattattaccttacttcatcggattaccaattctttcaacaatcaattttaatttcaaa 35895048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 21046079 - 21045997
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||  |||||||||||| ||||||||    
T  21046079 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgcacctcttctcacaagattcttct 21045997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 28476809 - 28476683
Alignment:
Q  140 aacaactacaaggttaaaccttttttcaagattacatag-tcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaag 238  Q
    |||||||||||||||||||| |||||||  |||| | |  |||| |||| ||||   |||||||||| ||| |||||||||||||| |  ||||| ||||    
T  28476809 aacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacccttaccttagattagatgaccggactctgcaag 28476710  T
Q  239 attgcttctcttctcacaatattcttc 265  Q
    |||||| |||||||||||| |||||||    
T  28476709 attgctcctcttctcacaagattcttc 28476683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 40390112 - 40390156
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaa 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttcaa 40390156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 7052203 - 7052132
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||  |||||||||||||||||||||| | || |||||| ||||| |||||||||| |||||    
T  7052203 acctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 7052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 21188123 - 21188030
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||| |||||||||||  ||||| | ||| |||| |||| ||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  21188123 aacatcaaaac-tatcaacaactacaaaattaaatcctttctcaaaattatatactcatgattaaaaaaggttagtcccacccttaccttagatt 21188030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 11808288 - 11808235
Alignment:
Q  104 gtttcaaaccctaattccacaacatcaaaacctattaacaactacaaggttaaa 157  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||    
T  11808288 gtttcaaatcctaattctgaaacatcaaaacctattaacaactacaaggttaaa 11808235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 20588675 - 20588742
Alignment:
Q  199 tcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||||| ||| |||| ||| |||||||  |||||||||||||||| ||||||||||| |||||||||    
T  20588675 tcccacccttaccttaaattggatgatcggactctacaagattgctcctcttctcacagtattcttct 20588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 20593213 - 20593280
Alignment:
Q  199 tcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||||| ||| |||| ||| |||||||  |||||||||||||||| ||||||||||| |||||||||    
T  20593213 tcccacccttaccttaaattggatgatcggactctacaagattgctcctcttctcacagtattcttct 20593280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 24723650 - 24723579
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||| |||||||||||||||||||||| | || ||||||  ||||  ||||||||| |||||    
T  24723650 acctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaat 24723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 12710901 - 12710971
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||| | ||| |||||||||||||||   |||||||||||||||| ||||||||| || ||||||||    
T  12710901 tagtcccatctttaccttagattagatgatgggactctacaagattgctcctcttctcataagattcttct 12710971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 8276180 - 8276037
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt-cca 122  Q
    ||||||||||| ||  |||| || ||||||||||||| |||| |||||| ||||||||||||||    |||  ||||  |  ||| || ||||||| |||    
T  8276180 acctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattccca 8276081  T
Q  123 caacatcaaaacctattaacaactacaaggttaaaccttttttca 167  Q
     ||||||||||  ||| |||||||||||||||||||| |||||||    
T  8276080 aaacatcaaaa-atatcaacaactacaaggttaaaccctttttca 8276037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 22145863 - 22145763
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaatt-aattttagtttcaaaccctaat 118  Q
    ||||||||||||||| || ||||| |||||| |||||||||   || ||||| |||||| |||||| ||| |||||| ||||||| |||| |||| ||||    
T  22145863 ctctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactccttcaacaattcaattttaatttctaaccttaat 22145764  T
Q  119 t 119  Q
    |    
T  22145763 t 22145763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 38056863 - 38056720
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt-cca 122  Q
    ||||||||||| ||  |||| || ||||||||||||| |||| |||||| ||||||||||||||    |||  ||||  |  ||| || ||||||| |||    
T  38056863 acctatgattaatctgcaacttggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattccca 38056764  T
Q  123 caacatcaaaacctattaacaactacaaggttaaaccttttttca 167  Q
     |||||||||| |||  |||||||||||||||||||| |||||||    
T  38056763 aaacatcaaaa-ctaacaacaactacaaggttaaaccctttttca 38056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 16058333 - 16058287
Alignment:
Q  195 ttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    ||||||||||| ||| ||||||||||||||||  |||||||||||||    
T  16058333 ttagtcccacccttaccttagattagatgatcggactctacaagatt 16058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 28313212 - 28313250
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaac 62  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  28313212 acctatgattattccacaacctgaacatcaattcttaac 28313250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 62 - 266
Target Start/End: Original strand, 174121 - 174325
Alignment:
Q  62 cctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaaggttaaacctt 161  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  174121 cctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccct 174220  T
Q  162 ttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatatt 261  Q
    |||||| ||||||||| | ||||||||||||||||||||||||| |||  |||| |||   |||| ||||||||||||||||| |||||||||||| |||    
T  174221 ttttcaggattacatacttatgattaaagaaggttagtcccacccttactttaggttaatcgatcgaactctacaagattgctcctcttctcacaagatt 174320  T
Q  262 cttct 266  Q
    |||||    
T  174321 cttct 174325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 51 - 226
Target Start/End: Original strand, 4310 - 4485
Alignment:
Q  51 ccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaa 150  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4310 ccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaa 4409  T
Q  151 ggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||||||||  ||||| ||| | ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  4410 ggttaaaccttttttcgggattatatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatc 4485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 50 - 226
Target Start/End: Original strand, 8709 - 8885
Alignment:
Q  50 accaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactaca 149  Q
    ||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||||| |||||    
T  8709 accaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaaccgattaacatctaca 8808  T
Q  150 aggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    |||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  8809 aggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatc 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 232 - 409
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  232 caccaattatcaacctaattcatcggattatctactctttctactataaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 331  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||| ||| || |||| ||| ||||| ||||||||||    
T  332 aaggttaaaccctttttcaggattacatacttatgattaaagaagattaatctcacccttaccttaggttagatgatc 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 62605 - 62774
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  62605 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccac 62704  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||||||||| || | ||| ||||||||    
T  62705 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtctcatccttaccttagatt 62774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 8950 - 9119
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8950 caccaattatcaacctaattcatcgcattatatactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 9049  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||| ||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||||||    
T  9050 aagattaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagatt 9119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 10093 - 9916
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||  ||||||    
T  10093 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattagaaactac 9994  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    |||| |||||| |||||||  |||||||| | ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  9993 aaggctaaaccctttttcagaattacatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatc 9916  T

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Target: scaffold0011 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 33341 - 33510
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33341 caccaattatcaacctaattcatcggattatctactatttcaacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 33440  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    | | ||||||| ||||||| ||||| ||| | ||||||||||||||||||||||||| ||| ||||||||    
T  33441 acgtttaaaccctttttcaggattaaatacttatgattaaagaaggttagtcccacccttaccttagatt 33510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 56863 - 57037
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  56863 caccaattatcaacctaattcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacatctac 56962  T
Q  149 aaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    |||||||   | ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||| ||| ||||||    
T  56963 aaggtta---cctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttatatgatc 57037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 266
Target Start/End: Original strand, 5517 - 5737
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  5517 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactac 5616  T
Q  149 aaggttaaacc--ttttttcaagattaca-tagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgctt 245  Q
    || ||||||||  ||||||||  |||| |  |  ||| |||| |||| | |||||||||| ||| |||| |||||||||||  ||||||||||||||||     
T  5617 aaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctc 5716  T
Q  246 ctcttctcacaatattcttct 266  Q
     ||||||||||| ||||||||    
T  5717 ttcttctcacaagattcttct 5737  T

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Target: scaffold0121 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 20092 - 20196
Alignment:
Q  55 ttattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactacaaggtt 154  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  20092 ttattaacctaattcatcggattatctattctttctacaatcaattttaatttcaaaccctaattctaaaacatcaaaacctattaacaactacaaggtt 20191  T
Q  155 aaacc 159  Q
    |||||    
T  20192 aaacc 20196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 571 - 681
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| ||||||||||||| |||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  571 caccaattatcaacctaattcatcggattatatactctttctatgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 670  T
Q  149 aaggttaaacc 159  Q
    || ||||||||    
T  671 aatgttaaacc 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 6303 - 6422
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaaca-tcaaaacctattaacaacta 147  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||| ||||||||    
T  6303 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacattaaaaacctataaacaacta 6402  T
Q  148 caaggttaaaccttttttca 167  Q
    |||| |||| || |||||||    
T  6403 caagattaatccctttttca 6422  T

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Target: scaffold0594 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 2099 - 2189
Alignment:
Q  21 tctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  2099 tctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaatcaattttagtttcaaa 2189  T

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Target: scaffold1437 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 459 - 343
Alignment:
Q  49 caccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatcaaaacctattaacaactac 148  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||  || |||||||||||| |||| |||||  |||||||||||||||||||||||||||    
T  459 caccaattatcaacctaattcatcggattatctaatctttttatgatcaattttagtttccaaccttaattttacaacatcaaaacctattaacaactac 360  T
Q  149 aaggttaaacctttttt 165  Q
    || |||||||| |||||    
T  359 aatgttaaacccttttt 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 169328 - 169408
Alignment:
Q  50 accaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattccacaacatca 130  Q
    ||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  169328 accaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatca 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 17078 - 17163
Alignment:
Q  135 ctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattag 220  Q
    |||| ||||||||||| |||||||| ||||| |  |||| ||| ||||||||||||||| || |||||||| ||| ||||||||||    
T  17078 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttaccttagattag 17163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 26609 - 26694
Alignment:
Q  135 ctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattag 220  Q
    |||| ||||||||||| |||||||| ||||| |  |||| ||| ||||||||||||||| || |||||||| ||| ||||||||||    
T  26609 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttaccttagattag 26694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 66273 - 66183
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 111  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||| | ||| |||||||||||||||    
T  66273 ctctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttc-aaaatcaattttagtttcaaa 66183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 28528 - 28646
Alignment:
Q  140 aacaactacaa-ggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaag 238  Q
    ||||||||||| ||||||||| |||||||  |||| ||| |||||||||| |||||||||||||||  ||| |||||||||||||||   ||||||||||    
T  28528 aacaactacaaaggttaaaccctttttcagaattatatactcatgattaaggaaggttagtcccactcttaccttagattagatgataggactctacaag 28627  T
Q  239 attgcttctcttctcacaa 257  Q
    |||||| ||||||||||||    
T  28628 attgctcctcttctcacaa 28646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 2679 - 2771
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    ||||||||||| |||| ||||||||||||||||| | || |||||| ||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  2679 tatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactctttcaacaatcaattttaatttcaaaccctaatt 2771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 2858 - 2960
Alignment:
Q  140 aacaactacaaggttaaaccttttttcaagattacatagtc-atgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaag 238  Q
    |||||||||||||||||||| |||||||  |||| | |  | || |||| |||| | |||||||||| ||| ||||||||| ||||||| ||||||||||    
T  2858 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattaaatgatcagactctacaag 2957  T
Q  239 att 241  Q
    |||    
T  2958 att 2960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 38633 - 38438
Alignment:
Q  23 tacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattt-tagtttcaaaccctaattcc 121  Q
    |||||||  ||||||||||||||||||| ||||| | |   || ||||| |||||| |||| ||||| ||||| || || || ||| |||||  | |||     
T  38633 tacctattgttattccacaacctgaacatcaattttcatgttaattcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttct 38534  T
Q  122 acaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    | ||||||||||| |||||||||||||||  ||||||| |||||||  |||| ||| |||||||||||||||||||||| |||| ||| ||||||||    
T  38533 ataacatcaaaac-tattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcacacccttaccttagatt 38438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 8699 - 8798
Alignment:
Q  20 ctctacctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 119  Q
    ||||||||||||||| ||  ||||||||||||||||||||| | || |||||| ||||| |||||||||| ||||| ||||||| ||||||| |||||||    
T  8699 ctctacctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaatcaattttaatttcaaaacctaatt 8798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 19169 - 19311
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatag-tcatgattaaagaaggttagtcccaccattatcttagattagat 222  Q
    ||||||||||| || ||||||||||||||||||||| |||||||  |||| | |  | |  |||| |||| |||||||||||| |||  |||||||||||    
T  19169 aacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttagattagat 19267  T
Q  223 gatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
     |||  |||||||||||||||| |||||||||||| ||||||||    
T  19268 catcggactctacaagattgctcctcttctcacaagattcttct 19311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 21812 - 21741
Alignment:
Q  195 ttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||||||||||||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  21812 ttagtcccaccattaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 21741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 498 - 416
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  498 attagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgttcctcttctcacaagattcttct 416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 3167 - 3260
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||| |||||||||||  ||||||| |||||||  |||| ||| ||||||||||||||||||||||||||| ||| ||||||||    
T  3167 aacatcaaaac-tatcaacaactacaaaattaaaccctttttcataattatatactcatgattaaagaaggttagtcccacccttaccttagatt 3260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 24161 - 24079
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  24161 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 24079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 77709 - 77791
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||    
T  77709 attagagaaagttagtctcacccttaccttagattagatgatcagactctacaagattactcctcttctcacaagattcttct 77791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 32016 - 32098
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  32016 attagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 32098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 37323 - 37405
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| ||||||| |||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  37323 attagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 37405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 79071 - 79151
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattctt 264  Q
    |||| |||| ||||||| |||| ||| |||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  79071 attagagaaagttagtctcacccttaccttaaattagatgatcgaactctacaagattgctcctcttctcacaaaattctt 79151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 241
Target Start/End: Complemental strand, 18808 - 18613
Alignment:
Q  48 acaccaattattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattcc-acaacatcaaaacctattaacaact 146  Q
    ||||||||||||| |||| |||||| ||||||||| ||||    |||  ||||  |  ||| || ||||||||| | ||||||||||| ||  |||||||    
T  18808 acaccaattattaccctaattcatcagattatctagtcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-taacaacaact 18710  T
Q  147 acaaggttaaaccttttttcaagatta---catagtcatgattaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    |||||||||||||||||||||| ||||   || | |||| |||| |||| | |||||||||| ||| ||||||||||||||||  |||||||||||||    
T  18709 acaaggttaaaccttttttcaaaattattaca-actcattattagagaaagctagtcccacccttaccttagattagatgatcggactctacaagatt 18613  T

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Target: scaffold0058 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 59735 - 59652
Alignment:
Q  135 ctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    |||| ||||||||||| |||||||| |||||||  |||| ||| |||||||||||||||||||| |||||| ||| ||||||||    
T  59735 ctatcaacaactacaaagttaaaccctttttcagaattatatactcatgattaaagaaggttagacccacccttaccttagatt 59652  T

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Target: scaffold0737 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 4744 - 4662
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||| ||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  4744 attagagaaagttagtccgacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 4662  T

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Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 34361 - 34443
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  ||||||||| |||||| |||||||||||| ||||||||    
T  34361 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaaaattgctactcttctcacaagattcttct 34443  T

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Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 58768 - 58850
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| ||||  ||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  58768 attagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctcctcttctcacaagattcttct 58850  T

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Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 78215 - 78133
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  |||||||||||||||| |||||||||||| ||| ||||    
T  78215 attagagaaagttagtcccacccttaccttaaattagatgatcgtactctacaagattgctcctcttctcacaagattattct 78133  T

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Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 23576 - 23669
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| |||||||||||||||  ||||||| ||||| |  |||| ||| ||||||||||||||||| ||||||||| ||| ||||||||    
T  23576 aacatcaaaac-tattaacaactacaaaattaaacccttttttagaattatatactcatgattaaagaaggtcagtcccacccttaccttagatt 23669  T

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Target: scaffold0149 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 21404 - 21473
Alignment:
Q  26 ctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||| |||||||||||||||||||||| | || |||||| ||||| |||||||||| |||||    
T  21404 ctatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 21473  T

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Target: scaffold0145 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 8086 - 8130
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaa 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttcaa 8130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 29273 - 29317
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaa 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttcaa 29317  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 16609 - 16467
Alignment:
Q  27 tatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctac-aattaattttagtttcaaaccctaattccac-- 123  Q
    |||||||||||  |||||| |||||||||||||| |||| ||||||  |||| |||||||||| || ||| ||||||| | || |||||||||| | |      
T  16609 tatgattattctgcaacctaaacaccaattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 16510  T
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttca 167  Q
    | |||| |||||||  |||||||||||||||||||| |||||||    
T  16509 atcatc-aaacctaacaacaactacaaggttaaaccctttttca 16467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 28686 - 28769
Alignment:
Q  135 ctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||||||||| ||||||  |||||||  |||| ||| | ||||||||||||||||||||||||  ||| ||||||||    
T  28686 ctattaacaactacaagattaaacgctttttcagaattatatacttatgattaaagaaggttagtcccactcttaccttagatt 28769  T

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Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 21984 - 22055
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctacaat 95  Q
    |||||||||||||| |||||||||||||||||| ||| | || |||||| ||||| |||||||||| |||||    
T  21984 acctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaat 22055  T

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Target: scaffold1633 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 1227 - 1309
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||  | ||||||| |||||| |||||||||||| ||||||||    
T  1227 attagagaaagttagtcccacccttaccttaaattagatgatcggattctacaaaattgctactcttctcacaagattcttct 1309  T

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Target: scaffold1102 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 2029 - 1947
Alignment:
Q  136 tattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    |||||||||| ||||  ||||||| |||||||  |||| | | ||||||||||||||||||||||||||| ||| ||||||||    
T  2029 tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggttagtcccaccgttaccttagatt 1947  T

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Target: scaffold0956 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 2577 - 2659
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| |||| |||||||||||| ||| | ||||||||||||||   |||||| |||||||| |||||||||||| ||||||||    
T  2577 attagagaaagttagtcccacccttaccgtagattagatgatcggtctctacgagattgctcctcttctcacaagattcttct 2659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11919 - 11993
Alignment:
Q  192 aggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    ||||||||| |||| ||||||||| |||   |||| ||||||||||||||||| |||||||||||| ||||||||    
T  11919 aggttagtctcacccttatcttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttct 11993  T

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Target: scaffold0379 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 10981 - 11051
Alignment:
Q  196 tagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||| ||||| ||| |||| |||||||||||| | |||||||||||||| |||||||||||| ||||||||    
T  10981 tagttccacccttaccttatattagatgatcagattctacaagattgctcctcttctcacaagattcttct 11051  T

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Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 31890 - 31987
Alignment:
Q  122 acaacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattag 220  Q
    ||||||||||||| |||||||||||| ||  ||||||| |||||||  || | ||| ||||||||||||| |||||||| |||| ||| ||||||||||    
T  31890 acaacatcaaaac-tattaacaactataaaattaaaccctttttcagaatcatatactcatgattaaagatggttagtctcacccttaccttagattag 31987  T

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Target: scaffold1939 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 38 - 181
Alignment:
Q  73 ggattatctactctttctacaattaattttagtttcaaaccctaa-ttccacaacatcaaaacctattaacaactacaaggttaaaccttttttcaagat 171  Q
    |||||| |||||||||| ||||| ||||||   ||  |||||||| ||| | ||||||||||| |||||||||||||||  | ||||| |||||||  |     
T  38 ggattacctactctttcaacaatcaattttcaattttaaccctaacttctataacatcaaaac-tattaacaactacaaattaaaaccctttttcagaac 136  T
Q  172 tacatagtcatgattaaagaaggttagtcccaccattatcttaga 216  Q
     | ||| | ||||||||||||||||||||||||| ||| ||||||    
T  137 catatactaatgattaaagaaggttagtcccacccttaccttaga 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 13572 - 13500
Alignment:
Q  194 gttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||||| ||| |||| |||||||||||  |||||||||||||  | |||||||||||| ||||||||    
T  13572 gttagtcccacccttaccttaaattagatgatcggactctacaagattaatcctcttctcacaagattcttct 13500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 1966 - 2042
Alignment:
Q  190 gaaggttagtcccaccattatcttagattagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||||||||| ||| |||||  ||   |||| ||||||||||||||||| |||||||||||| ||||||||    
T  1966 gaaggttagtcccacccttaccttagcataatcgatcgaactctacaagattgctcctcttctcacaagattcttct 2042  T

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Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 6494 - 6408
Alignment:
Q  140 aacaactacaa-ggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagattagatgatc 226  Q
    ||||||||||| ||||||||| |||||  | |||||||| | |||||||| |||||||||||||||| ||| ||||| ||||||||||    
T  6494 aacaactacaaaggttaaaccctttttaga-attacatacttatgattaatgaaggttagtcccacccttaccttaggttagatgatc 6408  T

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Target: scaffold0394 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 7603 - 7510
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattacatagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||| |||||||| ||  ||||||| |||||||  || | ||| |||| |||||||||||||||||||||| ||| ||||||||    
T  7603 aacatcaaaac-tatcaacaactataaaattaaaccctttttcagaatcatatactcataattaaagaaggttagtcccacccttaccttagatt 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 23890 - 23840
Alignment:
Q  216 attagatgatcaaactctacaagattgcttctcttctcacaatattcttct 266  Q
    |||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  23890 attagatgatcggactctacaagattgctcctcttctcacaagattcttct 23840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 117293 - 117362
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctactctttctaca 93  Q
    |||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  117293 acctatgattattctacaacttgaacaccacctattactttaattcatcagattatctactctttctaca 117362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 2031 - 1971
Alignment:
Q  24 acctatgattattccacaacctgaacaccaattattaacctagttcatcggattatctact 84  Q
    |||||||||||||| ||||| ||||||||| |||||| | || |||||| |||||||||||    
T  2031 acctatgattattctacaacatgaacaccacttattaccttaattcatcagattatctact 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 624 - 663
Alignment:
Q  179 tcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  624 tcatgattaaagaaggttagtcccacccttaccttagatt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 40253 - 40157
Alignment:
Q  124 aacatcaaaacctattaacaactacaaggttaaaccttttttcaagattac---atagtcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||| ||| |||||||||| ||||||||| ||||| |  ||||    ||| ||||||||| ||||||||||||||||| ||| ||||||||    
T  40253 aacatcaaaac-tatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccacccttaccttagatt 40157  T

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Target: scaffold0059 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 49746 - 49785
Alignment:
Q  179 tcatgattaaagaaggttagtcccaccattatcttagatt 218  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  49746 tcatgattaaagaaggttagtcccacccttaccttagatt 49785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 5289 - 5326
Alignment:
Q  84 tctttctacaattaattttagtttcaaaccctaattcc 121  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  5289 tcttcctacaatcaattttagtttcaaaccctaattcc 5326  T

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Target: scaffold0203 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 17970 - 17913
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatgatcaaactctacaagatt 241  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||  | |||||||||||    
T  17970 attagagaaagttagtcccacccttaccttagattagatgatcggattctacaagatt 17913  T

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Target: scaffold1434 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 1389 - 1349
Alignment:
Q  184 attaaagaaggttagtcccaccattatcttagattagatga 224  Q
    |||||||||||||||||||||| ||| |||||||| |||||    
T  1389 attaaagaaggttagtcccacccttaccttagattggatga 1349  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 127361 - 127302
Alignment:
Q  196 tagtcccaccattatcttagattagatgat--caaactctacaagattgcttctcttctc 253  Q
    |||||||||| ||| |||||||||||||||  || |||||||||| ||||| ||||||||    
T  127361 tagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 127302  T

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