View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15247_low_15 (Length: 265)
Name: NF15247_low_15
Description: NF15247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15247_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 43408320 - 43408095
Alignment:
| Q |
18 |
aattagggctgatctcctcctcataggtacccatatctgaataaggacgttgttggatgagttctttgtgtactcttttaagtaaccaacagcaaccact |
117 |
Q |
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| T |
43408320 |
aattagggctgatctcctcctcataggtacccatatctgaataaggacgttgttggatgagttctttgtgtactcttttaagtaaccaacagcaaccact |
43408221 |
T |
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| Q |
118 |
aatctttctttgacagatgttgttggacctggatttgccctaggcccaatccaccatctcttcccaacaacaaaaccactttcctgctgatcatcatgat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43408220 |
aatctttctttgacagatgttgttggacctggatttgccctaggcccaatccaccatctcttcccaacaacaaaaccactttcctgctgatcatcatgat |
43408121 |
T |
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| Q |
218 |
ttgctgctggagcagtgcattccatt |
243 |
Q |
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| T |
43408120 |
ttgctgctggagcagtgcattccatt |
43408095 |
T |
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