View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1524_high_4 (Length: 239)
Name: NF1524_high_4
Description: NF1524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1524_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 4997172 - 4997398
Alignment:
| Q |
1 |
ttggtaagtctatgtcctcacattcaaagcttccctgctcccaccttaatttcttgagcatctccggcaacttattcgttggagccttaccagatttcaa |
100 |
Q |
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| T |
4997172 |
ttggtaatgctatttcctcacattccatgctaccctgctcccaccttcatttcttgaacatctccgacaacttattcgttggagccttaccagatttcaa |
4997271 |
T |
|
| Q |
101 |
ctcagaaatctttgaactaagagtacttgacgccacaggaaacaacttctccggtgacattccagcgagttttggccgattaccaaaactgaatgtgctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4997272 |
ctcagaaatctttgaactaagagtacttgacgccacaggaaacaacttctccggtgacattccagcgagttttggccgattaccaaaactgaatgtgctc |
4997371 |
T |
|
| Q |
201 |
aatttgtctaataaccttttcacaggt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
4997372 |
aatttgtctaataaccttttcacaggt |
4997398 |
T |
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