View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15252_low_6 (Length: 306)
Name: NF15252_low_6
Description: NF15252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15252_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 290
Target Start/End: Original strand, 32551587 - 32551859
Alignment:
| Q |
18 |
ctttgaagtacaaaaagtaactagcgatgatggagttggcacaggtggaggcaccggtgatggtgtttgagaagaatcagactcggaagccgtagaaatg |
117 |
Q |
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| T |
32551587 |
ctttgaagtacaaaaagtaactagcgatgatggagttggcacaggtggaggcaacggtgatggtgtttgagaagaatcagactcggaagccgtagaaatg |
32551686 |
T |
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| Q |
118 |
gaactagaaagctctatataccataacagaaaagcgataaagctatagaaacttgagagattgtgtattcatctctgaaatttgttgagatttgttatca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32551687 |
gaactagaaagctctatataccataacagaaaagcgataaagctatagaaacttgagagattgtgtattcatctctgaaatttgttgagatttgttatca |
32551786 |
T |
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| Q |
218 |
atagaaagttagttacatgaaagactaggaaaggctatctacagcaacacctaactgcggtgacacagttagt |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32551787 |
atagaaagttagttacatgaaagactaggaaaggctatctacagcaacacctaactgcggtgacacagttagt |
32551859 |
T |
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