View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15252_low_8 (Length: 207)
Name: NF15252_low_8
Description: NF15252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15252_low_8 |
 | |
|
| [»] scaffold0070 (1 HSPs) |
| | |
|
| [»] scaffold0830 (1 HSPs) |
| | |
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Alignment Details
Target: chr8 (Bit Score: 149; Significance: 7e-79; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25570445 - 25570257
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
25570445 |
gagctttgatgcagaatgcaatgcaatgagaaatctacgacatcgaaatctggtaaagattatcagtagttgctcaaatcttgatttcaaatcattggtg |
25570346 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||| ||||||||||||||||| ||| ||||| |
|
|
| T |
25570345 |
atggagttcatgtcaaatggaagtgtagacaaatggttatattcaaataactattgtctaagtttcttgcaaaggttaaatataatgat |
25570257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25695919 - 25695731
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25695919 |
gagctttgatgcagaatgcaatgcgatgagaaatctacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
25695820 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||| ||||||||||||||||| ||| ||||| |
|
|
| T |
25695819 |
atggagttcatgtcaaatggaagtgtagacaaatggttatattcaaataactattgtctaagtttcttgcaaaggttaaatataatgat |
25695731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 23258763 - 23258575
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
23258763 |
gagctttgatgcagaatgcaatgcaatgagaaatctacggcatcgaaatctggttaagattatcagcagttgttccaatcttgatttcaaatcattggtg |
23258664 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||| ||| ||||| |
|
|
| T |
23258663 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagataaccattgcttaaatttcttgcaaaggttaaatataatgat |
23258575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 24912585 - 24912773
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24912585 |
gagctttgatgtagaatgcaatgcgatgagaaatctacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
24912684 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||| ||||||||||||||||| ||| ||||| |
|
|
| T |
24912685 |
atggagttcatgtcaaatggaagtgtagacaaatggttatattcaaataactattgtctaagtttcttgcaaaggttaaatataatgat |
24912773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25323215 - 25323027
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
25323215 |
gagctttgatgtagaatgcaatgcaatgagaaatctacgacatcgaaatctggtaaagattatcagtagttgctcaaatcttgatttcaaatcattggtg |
25323116 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||| |||||||||| ||| ||||| |
|
|
| T |
25323115 |
atggagttcatgtcaaatggaagtgttgacaaatggttatattcaaataactattgtctaaatttcttacaaaggttaaatataatgat |
25323027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25647571 - 25647383
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
25647571 |
gagctttgatgcagaatgtaatgcaatgagaaatctacgacatcgaaatctggtaaagattatcagaagttgatcaaatcttgatttcaaatcattggtg |
25647472 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||||||||||||||||||||| ||| ||||| |
|
|
| T |
25647471 |
atggagttcatgtcaaatggaagtgtagacaaatggttatattcaaataactattgtctaaatttcttgcaaaggttaaatataatgat |
25647383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25605196 - 25605008
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25605196 |
gagctttgatgcagaatgcaatgcgatgagaaatctacgacatcggaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
25605097 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||||||| || |||||||| |||||||||| |||||||||| ||| ||||| |
|
|
| T |
25605096 |
atggagttcatgtcaaatggaagtgtagaaaaatggttatattcaaataactattgtctaaatttcttacaaaggttaaatataatgat |
25605008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25800837 - 25800649
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25800837 |
gagctttgatgcagaatgcaatgcgatgagaaatctacgtcatcgaaatttggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
25800738 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||| |||||||||| ||| ||||| |
|
|
| T |
25800737 |
atggagttcatgtcaaatggaagtgtagacaaatggttatattcaaataactattgtctaaatttcttacaaaggttaaatataatgat |
25800649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 24874958 - 24875146
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
24874958 |
gagctttgatgcagaatgcaatgcaatgagaaatctacgtcatcgaaatctggtaaagattatcagtagttgctcaaatcttgatttcaaatcattggtg |
24875057 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||| || |||||||| ||| ||||||||||||||||| ||| ||||| |
|
|
| T |
24875058 |
atggagttcatgtcaaatggaagtgtagacagttggttatattcaaataactattgtctaagtttcttgcaaaggttaaatataatgat |
24875146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25453541 - 25453353
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25453541 |
gagctttgatgaagaatgcaatgcaatgagaaatctacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggta |
25453442 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||| || |||||||| | | ||||||||||||||||| ||| ||||| |
|
|
| T |
25453441 |
atggaattcatgtcaaatggaagtgtagacaaatggttatattcaaataactattgtctcagtttcttgcaaaggttaaatataatgat |
25453353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25341539 - 25341351
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25341539 |
gagctttgatgcagaatgcaatgcaatgagaaatctacgacatcgaaatatggttaagattatcagcagttgttcaaatcttgatttcaaatcattggtg |
25341440 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||| || || |||| ||||||||||||||||||||| ||| ||||| |
|
|
| T |
25341439 |
atggagttcatgtcaaatggaagtgtagacaattggttatattcaaataacaattgaataaatttcttgcaaaggttaaatataatgat |
25341351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25715752 - 25715564
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
25715752 |
gagctttgatgcagaatgcaatgcgatgagaaatctacgacatcggaatctggtaaagattatcagaagttgctcaaatcttgatttcaaatcattggtg |
25715653 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||||||| || | |||||| ||| ||||||||||||||||| ||| ||||| |
|
|
| T |
25715652 |
atggagttcatgtcaaatggaagtgtagaaaaatggttatattcaaataaatattgtctaagtttcttgcaaaggttaaatataatgat |
25715564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 22900310 - 22900499
Alignment:
| Q |
2 |
ggagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggt |
101 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||| |
|
|
| T |
22900310 |
ggagctttgatcgagaatgcaatgcattgagaaatctacggcatcgaaatctggttaagattatcagcagttgttcaaatattgatttcaaagcattggt |
22900409 |
T |
|
| Q |
102 |
gatggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || | | |||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
22900410 |
gatggagttcatgtcaaatggaagtgtggacaaatggttatattcaaataattgttgtttaaatttcttgcaaaggttaaatataatgat |
22900499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 25686209 - 25686018
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||||||||||||||| |||||||||||| |
|
|
| T |
25686209 |
gagctttgatgcagaatgcaatgcgatgagaaatctacgacatcgaaatctagtaaagattatcggtagttgctcaaatcttgattttaaatcattggtg |
25686110 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattca---gattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||| |||||||||| ||| ||||| |
|
|
| T |
25686109 |
atggagttcatgtcaaatggaagtgtagacaaatggttatattcaaataataactattgtctaaatttcttacaaaggttaaatataatgat |
25686018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 25476220 - 25476044
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||| |||||||||||||||| || |||||||| | ||||| |||||||| |||||||||||||||||| |
|
|
| T |
25476220 |
gagctttgatgtagaatgcaatgcaacgagaaatctacgacatcgaaatcttgttaagattatttgtagttgttcaaatctcgatttcaaatcattggtg |
25476121 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggtt |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | || | | |||||| | ||||||||||||||| |
|
|
| T |
25476120 |
atggagttcatgtcaaatggaagtgtggacaaatggttatatttaaataattgttgtttgagtttcttgcaaaggtt |
25476044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 25311558 - 25311445
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25311558 |
gagctttgatgcagaatgcaatgcaatgagaaatctacgacatcgaaatctggttaagattatcagcagttgttcaaatcttgatttcaaatcattggtg |
25311459 |
T |
|
| Q |
103 |
atggagttcatgtc |
116 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
25311458 |
atggagttcatgtc |
25311445 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 16545 - 16733
Alignment:
| Q |
3 |
gagctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
102 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16545 |
gagctttgatgcagaatgcaatgcgatgagaaatctacgacatcgaaatttggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtg |
16644 |
T |
|
| Q |
103 |
atggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||| || |||||||| ||| ||||||||||||||||| ||| ||||| |
|
|
| T |
16645 |
atggagttcatgtcaaatggaagtgtagacagttggttatattcaaataactattgtctaagtttcttgcaaaggttaaatataatgat |
16733 |
T |
|
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Target: scaffold0830 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 4035 - 4219
Alignment:
| Q |
7 |
tttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtgatgg |
106 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4035 |
tttgatgtagaatgcaatgcaatgagaaatctacgacatcgaaatctggttaagattatcagcagttgttcaaatcttgatttcaaatcattggtgatgg |
4134 |
T |
|
| Q |
107 |
agttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| || | || ||| ||||||||||||||||||||| ||| ||||| |
|
|
| T |
4135 |
agttcatgtcaaatggaagtgtagacaaatggttatattcaaataaataatgtataaatttcttgcaaaggttaaatataatgat |
4219 |
T |
|
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Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 10324411 - 10324224
Alignment:
| Q |
4 |
agctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtga |
103 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||| |||||||| |
|
|
| T |
10324411 |
agctttgatgcagaatgcaatgtaatgagaaatctacgacatcgaaatctggttaagattatcagtagttgttcaaatcatgatttcaaagcattggtgc |
10324312 |
T |
|
| Q |
104 |
tggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggttaagtatcatgat |
191 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| |||||||||||||| ||||||| ||| ||||| |
|
|
| T |
10324311 |
tggagttcatgtcaaatggaagtgtggacgattggttatattcagataactattgcttaaatttcttgcataggttaaatataatgat |
10324224 |
T |
|
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Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 16885950 - 16886122
Alignment:
| Q |
7 |
tttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtgatgg |
106 |
Q |
| |
|
||||| ||||| |||||||||||| | | | | |||||||||||||| || || |||| | ||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
16885950 |
tttgacgcagaatgcaatgcaatgcgcattcttcgacatcgaaatcttgttgaggttattacaagttgttcaaataaagatttcaagtcattggtgatgg |
16886049 |
T |
|
| Q |
107 |
agttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggtt |
179 |
Q |
| |
|
|||| ||||||||||||||||| || ||||||||||| || ||| ||||||||||| |||||||||||||||| |
|
|
| T |
16886050 |
agtttatgtcaaatggaagtgttgaaaaatggttatactcggataactattgtttagatttcttgcaaaggtt |
16886122 |
T |
|
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Target: chr2 (Bit Score: 68; Significance: 1e-30; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 5101666 - 5101841
Alignment:
| Q |
4 |
agctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtga |
103 |
Q |
| |
|
|||||||||||||| |||||||||||| | || | |||||| ||||||| || | ||||| || ||||| ||||||| |||||||||||| | |||| |
|
|
| T |
5101666 |
agctttgatgcagaatgcaatgcaatgcgcaaccttcgacatagaaatctagttcaaattatgagtagttgttcaaatcctgatttcaaatctctagtga |
5101765 |
T |
|
| Q |
104 |
tggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggtt |
179 |
Q |
| |
|
||||||| |||||||||||||||||||| | ||||||||| || ||| |||||| ||| |||||||||||||||| |
|
|
| T |
5101766 |
tggagtttatgtcaaatggaagtgtggaaagatggttatactctgataactattttttggatttcttgcaaaggtt |
5101841 |
T |
|
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Target: chr2; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 5119225 - 5119400
Alignment:
| Q |
4 |
agctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtga |
103 |
Q |
| |
|
|||||||||||||| |||||||||||| | || | |||||| ||||||| || | ||||| || ||||| ||||||| |||||||||||| | |||| |
|
|
| T |
5119225 |
agctttgatgcagaatgcaatgcaatgcgcaaccttcgacatagaaatctagttcaaattatgagtagttgttcaaatcctgatttcaaatctctagtga |
5119324 |
T |
|
| Q |
104 |
tggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggtt |
179 |
Q |
| |
|
||||||| |||||||||||||||||||| | ||||||||| || ||| |||||| ||| |||||||||||||||| |
|
|
| T |
5119325 |
tggagtttatgtcaaatggaagtgtggaaagatggttatactctgataactattttttggatttcttgcaaaggtt |
5119400 |
T |
|
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Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 5080308 - 5080136
Alignment:
| Q |
4 |
agctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtga |
103 |
Q |
| |
|
|||||| ||||||| |||||||| ||| | ||| | || ||||||||||| || |||| |||| |||||| |||||| || |||||| || ||||| | |
|
|
| T |
5080308 |
agctttaatgcagaatgcaatgctatgcgcaatcttcggcatcgaaatcttgttgagatcatcaccagttgttcaaatgttaatttcaggtctttggtaa |
5080209 |
T |
|
| Q |
104 |
tggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaag |
176 |
Q |
| |
|
||||||| |||||||||||||| |||| ||||||||||| | ||| |||||| |||| |||||||||||| |
|
|
| T |
5080208 |
tggagttaatgtcaaatggaagcttggaaaaatggttatacactgataactattttttaggtttcttgcaaag |
5080136 |
T |
|
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Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 14412619 - 14412444
Alignment:
| Q |
4 |
agctttgatgcagagtgcaatgcaatgagaaatttacgacatcgaaatctggtaaagattatcagcagttgctcaaatcttgatttcaaatcattggtga |
103 |
Q |
| |
|
|||||||||||||| |||||||||||| | || | || ||| ||||||| || | |||||||| ||||| ||||||| |||||||||||| | |||| |
|
|
| T |
14412619 |
agctttgatgcagaatgcaatgcaatgcgcaacctccggcatagaaatctcgtccaaattatcagtagttgttcaaatcctgatttcaaatctctagtga |
14412520 |
T |
|
| Q |
104 |
tggagttcatgtcaaatggaagtgtggacaaatggttatattcagattactattgtttaaatttcttgcaaaggtt |
179 |
Q |
| |
|
||||||| |||||||| |||||| |||| ||||||||||| || || || ||| ||| |||||||||||||||| |
|
|
| T |
14412519 |
tggagtttatgtcaaacggaagtttggaaaaatggttatactctaataacaattttttggatttcttgcaaaggtt |
14412444 |
T |
|
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