View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15254_high_68 (Length: 232)
Name: NF15254_high_68
Description: NF15254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15254_high_68 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 45398706 - 45398508
Alignment:
| Q |
17 |
ttctcaagaaataggtattttgttatgaatttgattgcttagtcacagaaataggtgctctttaataggcataatttgatttcaatttttatacagatta |
116 |
Q |
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| T |
45398706 |
ttctcaagaaataggtattttgttatgaatttgattgcttagtcacagaaataggtgctctttaataggcataatttgatttcaatttttatacagatta |
45398607 |
T |
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| Q |
117 |
tcttcaggatcaacttagtacaaaaaacacagaagtgaactatctagaagagcgtgttcgtgttcttgaattgaaatttaaagagaccgaagatttacg |
215 |
Q |
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| T |
45398606 |
tcttcaggatcaacttagtacaaaaaacacagaagtgaactatctagaagagcgtgttcgtgttcttgaattgaaatttaaagagactgaagatttacg |
45398508 |
T |
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