View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15254_high_9 (Length: 582)

Name: NF15254_high_9
Description: NF15254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15254_high_9
NF15254_high_9
[»] chr8 (34 HSPs)
chr8 (243-403)||(26144496-26144663)
chr8 (405-557)||(16235440-16235592)
chr8 (405-557)||(26145700-26145852)
chr8 (405-557)||(26144705-26144854)
chr8 (243-406)||(16235632-16235802)
chr8 (244-406)||(16234287-16234456)
chr8 (120-211)||(32638832-32638923)
chr8 (268-335)||(26145917-26145984)
chr8 (470-554)||(16234472-16234556)
chr8 (121-207)||(16384683-16384768)
chr8 (72-178)||(40412508-40412614)
chr8 (85-194)||(8171170-8171278)
chr8 (121-197)||(12580520-12580596)
chr8 (153-207)||(4246006-4246059)
chr8 (117-207)||(32759439-32759528)
chr8 (155-211)||(5539485-5539541)
chr8 (121-196)||(22201304-22201379)
chr8 (153-196)||(36483511-36483554)
chr8 (121-196)||(34901349-34901424)
chr8 (153-196)||(45217219-45217262)
chr8 (153-207)||(2872909-2872962)
chr8 (153-195)||(32424998-32425040)
chr8 (153-207)||(32877503-32877556)
chr8 (153-207)||(43771703-43771756)
chr8 (154-197)||(13422283-13422326)
chr8 (153-211)||(12357939-12357997)
chr8 (153-211)||(12359067-12359125)
chr8 (243-293)||(16237155-16237205)
chr8 (153-207)||(25022191-25022244)
chr8 (153-195)||(28876565-28876607)
chr8 (155-197)||(37372334-37372376)
chr8 (153-195)||(42949207-42949249)
chr8 (153-197)||(27886265-27886309)
chr8 (153-197)||(27944923-27944967)
[»] chr4 (24 HSPs)
chr4 (66-237)||(39957600-39957770)
chr4 (66-144)||(24784367-24784445)
chr4 (118-207)||(52122833-52122921)
chr4 (153-211)||(38492268-38492326)
chr4 (121-207)||(19738763-19738848)
chr4 (117-206)||(53322404-53322492)
chr4 (119-211)||(36943730-36943822)
chr4 (119-197)||(52721339-52721417)
chr4 (119-196)||(31946191-31946268)
chr4 (121-197)||(3403552-3403628)
chr4 (119-195)||(24793696-24793772)
chr4 (121-196)||(8064076-8064151)
chr4 (153-196)||(36511933-36511976)
chr4 (153-207)||(5325720-5325773)
chr4 (119-197)||(40694145-40694223)
chr4 (153-207)||(42472568-42472621)
chr4 (154-207)||(17892314-17892366)
chr4 (153-197)||(4400543-4400587)
chr4 (153-197)||(5834905-5834949)
chr4 (153-197)||(21637740-21637784)
chr4 (153-196)||(37992532-37992575)
chr4 (153-196)||(41145688-41145731)
chr4 (159-196)||(14795078-14795115)
chr4 (153-205)||(4119504-4119556)
[»] chr3 (34 HSPs)
chr3 (66-211)||(2567310-2567454)
chr3 (72-196)||(52684277-52684401)
chr3 (117-211)||(22611347-22611441)
chr3 (153-215)||(1528549-1528611)
chr3 (153-211)||(53192549-53192607)
chr3 (121-207)||(40497396-40497481)
chr3 (153-207)||(45532979-45533032)
chr3 (119-207)||(28968576-28968663)
chr3 (121-197)||(37996778-37996854)
chr3 (119-211)||(47642068-47642159)
chr3 (153-197)||(52505832-52505876)
chr3 (153-207)||(1679697-1679750)
chr3 (153-211)||(10225161-10225218)
chr3 (153-195)||(45347374-45347416)
chr3 (153-197)||(7899718-7899762)
chr3 (119-196)||(13748413-13748489)
chr3 (156-207)||(42464909-42464959)
chr3 (153-207)||(7327778-7327831)
chr3 (153-211)||(19349599-19349657)
chr3 (119-197)||(19421491-19421569)
chr3 (153-207)||(35389816-35389869)
chr3 (153-207)||(42229740-42229793)
chr3 (85-211)||(21006424-21006552)
chr3 (154-215)||(53165509-53165570)
chr3 (120-197)||(55268982-55269059)
chr3 (153-197)||(3983772-3983816)
chr3 (119-211)||(19879068-19879160)
chr3 (120-196)||(28882644-28882720)
chr3 (153-197)||(48122900-48122944)
chr3 (153-208)||(5271533-5271588)
chr3 (153-207)||(33240016-33240069)
chr3 (153-195)||(52121257-52121299)
chr3 (154-195)||(30787562-30787603)
chr3 (153-197)||(41742071-41742115)
[»] chr2 (26 HSPs)
chr2 (72-199)||(45159227-45159353)
chr2 (153-211)||(20536826-20536884)
chr2 (118-207)||(33324884-33324972)
chr2 (118-207)||(38602286-38602374)
chr2 (121-207)||(7876780-7876865)
chr2 (153-207)||(16561866-16561919)
chr2 (153-207)||(22484333-22484386)
chr2 (153-207)||(40308896-40308949)
chr2 (154-215)||(14824195-14824256)
chr2 (119-211)||(3563902-3563993)
chr2 (153-197)||(4170501-4170545)
chr2 (153-197)||(6497648-6497692)
chr2 (153-196)||(1776435-1776478)
chr2 (153-196)||(8482916-8482959)
chr2 (153-207)||(4561854-4561907)
chr2 (153-207)||(6124239-6124292)
chr2 (153-194)||(2319353-2319394)
chr2 (153-206)||(7807373-7807425)
chr2 (154-211)||(40536293-40536350)
chr2 (153-197)||(35342392-35342436)
chr2 (153-197)||(44156672-44156716)
chr2 (153-195)||(18301049-18301091)
chr2 (155-207)||(22571003-22571054)
chr2 (153-197)||(31236185-31236229)
chr2 (153-197)||(34146255-34146299)
chr2 (153-197)||(40497384-40497428)
[»] chr7 (34 HSPs)
chr7 (85-207)||(25969460-25969582)
chr7 (85-207)||(9250351-9250474)
chr7 (120-211)||(36202754-36202845)
chr7 (120-211)||(42897050-42897140)
chr7 (118-196)||(38263072-38263150)
chr7 (116-207)||(48163471-48163561)
chr7 (121-207)||(27353984-27354069)
chr7 (121-207)||(27555336-27555421)
chr7 (153-211)||(39520848-39520905)
chr7 (117-193)||(11829765-11829841)
chr7 (153-197)||(47720171-47720215)
chr7 (121-196)||(16850859-16850934)
chr7 (153-211)||(47238616-47238674)
chr7 (121-196)||(34238231-34238306)
chr7 (121-196)||(40095723-40095798)
chr7 (153-207)||(34122616-34122669)
chr7 (66-128)||(47720094-47720156)
chr7 (153-197)||(16564378-16564422)
chr7 (153-197)||(16601240-16601284)
chr7 (119-195)||(26973127-26973203)
chr7 (153-196)||(1043070-1043113)
chr7 (116-195)||(26773674-26773753)
chr7 (154-197)||(35159937-35159980)
chr7 (153-211)||(554889-554947)
chr7 (153-195)||(1363011-1363053)
chr7 (153-211)||(36660536-36660594)
chr7 (154-199)||(7416684-7416729)
chr7 (124-197)||(26845866-26845939)
chr7 (154-195)||(27688010-27688051)
chr7 (153-197)||(21409463-21409507)
chr7 (153-197)||(23311794-23311838)
chr7 (153-189)||(27398046-27398082)
chr7 (154-194)||(40041454-40041494)
chr7 (153-197)||(44960134-44960178)
[»] chr5 (27 HSPs)
chr5 (85-207)||(30777452-30777574)
chr5 (72-211)||(6243085-6243225)
chr5 (118-207)||(32707795-32707883)
chr5 (153-207)||(1639781-1639834)
chr5 (153-211)||(7977302-7977360)
chr5 (153-207)||(11906284-11906337)
chr5 (122-207)||(32624943-32625027)
chr5 (153-211)||(12852170-12852227)
chr5 (119-197)||(26716348-26716426)
chr5 (153-211)||(26795003-26795060)
chr5 (119-197)||(26986088-26986166)
chr5 (121-207)||(39690730-39690815)
chr5 (153-196)||(1795468-1795511)
chr5 (153-207)||(9792385-9792438)
chr5 (119-197)||(17138219-17138297)
chr5 (153-207)||(32728708-32728761)
chr5 (153-197)||(33829828-33829872)
chr5 (153-196)||(3934787-3934830)
chr5 (153-196)||(14836457-14836500)
chr5 (153-196)||(21251541-21251584)
chr5 (154-197)||(30284607-30284650)
chr5 (119-197)||(26691691-26691769)
chr5 (119-197)||(26961423-26961501)
chr5 (121-207)||(41392679-41392764)
chr5 (120-197)||(34032444-34032521)
chr5 (153-197)||(19102464-19102508)
chr5 (153-189)||(27938242-27938278)
[»] chr1 (26 HSPs)
chr1 (121-211)||(36367669-36367759)
chr1 (118-207)||(1043293-1043381)
chr1 (118-196)||(1036535-1036613)
chr1 (153-207)||(20409553-20409606)
chr1 (121-207)||(28949208-28949293)
chr1 (121-207)||(37104186-37104271)
chr1 (153-206)||(8132250-8132302)
chr1 (119-196)||(28659265-28659342)
chr1 (153-196)||(2364753-2364796)
chr1 (121-196)||(6916841-6916916)
chr1 (121-196)||(38330503-38330578)
chr1 (121-196)||(52895680-52895755)
chr1 (153-207)||(3426914-3426967)
chr1 (153-207)||(13012991-13013044)
chr1 (153-207)||(25256682-25256735)
chr1 (153-207)||(30323781-30323834)
chr1 (153-207)||(31653401-31653454)
chr1 (153-195)||(38948809-38948851)
chr1 (153-194)||(38218461-38218502)
chr1 (154-194)||(14167162-14167202)
chr1 (153-207)||(37346847-37346900)
chr1 (155-204)||(9092494-9092543)
chr1 (153-194)||(34432382-34432423)
chr1 (153-193)||(5984306-5984346)
chr1 (153-197)||(14334235-14334279)
chr1 (153-193)||(32381058-32381098)
[»] scaffold0640 (1 HSPs)
scaffold0640 (118-207)||(8056-8144)
[»] chr6 (11 HSPs)
chr6 (118-207)||(8357024-8357112)
chr6 (155-215)||(7254977-7255037)
chr6 (153-207)||(3212543-3212596)
chr6 (121-207)||(31195836-31195921)
chr6 (119-196)||(19128229-19128306)
chr6 (155-215)||(10894584-10894644)
chr6 (121-196)||(1036793-1036868)
chr6 (153-194)||(7188778-7188819)
chr6 (153-197)||(32130658-32130702)
chr6 (153-206)||(21113579-21113632)
chr6 (153-193)||(32018056-32018096)
[»] scaffold0177 (1 HSPs)
scaffold0177 (153-211)||(25540-25597)
[»] scaffold0037 (1 HSPs)
scaffold0037 (153-211)||(27790-27848)
[»] scaffold0250 (1 HSPs)
scaffold0250 (120-207)||(5578-5664)
[»] scaffold0112 (1 HSPs)
scaffold0112 (153-211)||(42075-42132)
[»] scaffold0060 (1 HSPs)
scaffold0060 (121-207)||(30411-30496)
[»] scaffold0406 (1 HSPs)
scaffold0406 (153-197)||(13931-13975)
[»] scaffold0005 (1 HSPs)
scaffold0005 (159-196)||(44616-44653)


Alignment Details
Target: chr8 (Bit Score: 106; Significance: 9e-53; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 243 - 403
Target Start/End: Original strand, 26144496 - 26144663
Alignment:
Q  243 ctgcctagtgtatttttctgcttaatttcaaatagaaatgtgtgttcttgaatataattgcttttgccccaaattaattgtagttttgatgtata----- 337  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |         
T  26144496 ctgcctagtgtatgtttctgcttaatttcaaatagaaatgtgtgttcttgaatataattgcttttgccccaaatgaattgtagttttgatgtaaatgata 26144595  T
Q  338 --gatcattcctagttgattttgcaatgtttaatcattgaaatggtttgcagtcttcatttcagttaa 403  Q
      ||| |||| | |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  26144596 ctgataattcttggttggttttgcaatgtttaatcattgaaatggtttgcaatcttcatttaagttaa 26144663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 405 - 557
Target Start/End: Complemental strand, 16235592 - 16235440
Alignment:
Q  405 tttattagttgtatctttaaattctcatatgtaatgcacattattgacattttgtacgaataaacttgtgtgatttaaataatttctatgaaacagtaat 504  Q
    ||||||||||||||||| |||||||||| |||  ||||||||||||||||||||| |   ||||||||||||||||||| ||||||||||||||||||||    
T  16235592 tttattagttgtatcttcaaattctcatttgtggtgcacattattgacattttgttcatttaaacttgtgtgatttaaagaatttctatgaaacagtaat 16235493  T
Q  505 tgcaaggggagcatcaaggattttgtggttaaaggcttcgagttgaacatctt 557  Q
    ||||||| ||| || ||| |||||||||||||||||||| |||||||||||||    
T  16235492 tgcaaggagaggataaagaattttgtggttaaaggcttcaagttgaacatctt 16235440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 405 - 557
Target Start/End: Complemental strand, 26145852 - 26145700
Alignment:
Q  405 tttattagttgtatctttaaattctcatatgtaatgcacattattgacattttgtacgaataaacttgtgtgatttaaataatttctatgaaacagtaat 504  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |   || |||||| ||||||||||||||||||||||||||||||    
T  26145852 tttattagttgtatctttaaattctcatttgtggtgcacattattgacattttgttcatttagacttgtttgatttaaataatttctatgaaacagtaat 26145753  T
Q  505 tgcaaggggagcatcaaggattttgtggttaaaggcttcgagttgaacatctt 557  Q
    |||||||  || || |||||||||||||||||||| ||| ||||||| |||||    
T  26145752 tgcaaggaaaggataaaggattttgtggttaaaggtttcaagttgaaaatctt 26145700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 405 - 557
Target Start/End: Original strand, 26144705 - 26144854
Alignment:
Q  405 tttattagttgtatctttaaattctcatatgtaatgcacattattgacattttgtacgaataaacttgtgtgatttaaataatttctatgaaacagtaat 504  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||    
T  26144705 tttattagttgtatctttaaattctcatctgtggtgcacattattgacattttgttcttttaaacttgtgtgatttaaataatttctatgaaacagtaat 26144804  T
Q  505 tgcaaggggagcatcaaggattttgtggttaaaggcttcgagttgaacatctt 557  Q
    | ||||| ||| || ||||||||  ||||| ||||| ||||||||||||||||    
T  26144805 tacaaggagaggataaaggattt--tggtt-aaggcatcgagttgaacatctt 26144854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 243 - 406
Target Start/End: Complemental strand, 16235802 - 16235632
Alignment:
Q  243 ctgcctagtgtatttttctgcttaatttcaaatagaaatgtgtgttcttgaatataattgcttttgccccaaattaattgtagttttgatg-------ta 335  Q
    ||||||||| ||| |||| ||||||||| |||||||||||| ||||||| |||||||||||||||| ||||||| | ||||||||||||||       ||    
T  16235802 ctgcctagtctatgtttccgcttaattttaaatagaaatgtatgttcttaaatataattgcttttgtcccaaatgatttgtagttttgatgtaattgata 16235703  T
Q  336 tagatcattcctagttgattttgcaatgtttaatcattgaaatggtttgcagtcttcatttcagttaactt 406  Q
    | |||||||| | |||| ||||||||||| |||||||||||||| ||||||  ||||||||||||||||||    
T  16235702 ttgatcattcttggttggttttgcaatgtataatcattgaaatgatttgcatacttcatttcagttaactt 16235632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 16234287 - 16234456
Alignment:
Q  244 tgcctagtgtatttttctgcttaatttcaaatagaaatgtgtgttcttgaatataattgcttttgccccaaattaattgtagttttgatgtata------ 337  Q
    |||||||||||| |||| ||||||||| |||||||  |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |          
T  16234287 tgcctagtgtatgtttccgcttaattttaaatagagctgtgtgttcttgaatataattgtttttgccccaaatgaatagtagttttgatgtaaatgatac 16234386  T
Q  338 -gatcattcctagttgattttgcaatgtttaatcattgaaatggtttgcagtcttcatttcagttaactt 406  Q
     |||||||| | |||| ||||||||||| |||||||| ||| | ||| | ||||||||||||| ||||||    
T  16234387 tgatcattcttggttggttttgcaatgtctaatcattcaaacgattttccgtcttcatttcagataactt 16234456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 32638832 - 32638923
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  32638832 cgtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgggcaggtatcggtgca 32638923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 26145984 - 26145917
Alignment:
Q  268 tttcaaatagaaatgtgtgttcttgaatataattgcttttgccccaaattaattgtagttttgatgta 335  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||    
T  26145984 tttcaaatagaaatgtgtgttcttgcatataattgcttttgccccaaatgaattatatttttgatgta 26145917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 470 - 554
Target Start/End: Original strand, 16234472 - 16234556
Alignment:
Q  470 ttgtgtgatttaaataatttctatgaaacagtaattgcaaggggagcatcaaggattttgtggttaaaggcttcgagttgaacat 554  Q
    |||||||||||||||||||| ||||||||| ||||| ||| |  || || ||||||||||||||||||||||| |||||||||||    
T  16234472 ttgtgtgatttaaataatttatatgaaacaataattccaaagaaaggataaaggattttgtggttaaaggctttgagttgaacat 16234556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 16384768 - 16384683
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  16384768 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcggg-aagtatcgg 16384683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 40412614 - 40412508
Alignment:
Q  72 tatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatatt 171  Q
    |||| |||| || ||||||||||||||||||| | ||||||||  |||||||||| |||||||| ||||||||        |||||||||||||||||||    
T  40412614 tatccgtgcgtatcggaacaaatagaagtatcatccgcgtatccgggacgtatcgaaaagtatcggataattatttttttaaaaaataaaatttaatatt 40412515  T
Q  172 cggatac 178  Q
    |||||||    
T  40412514 cggatac 40412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 8171170 - 8171278
Alignment:
Q  85 cggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcg 184  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||| ||||  |||||||         |||||||||||||||||||||||||||| |     
T  8171170 cggaacaaatagaagtatccttcgcgtatccgggatgtatcggaaattatcgaataattatttttttttaaaataaaatttaatattcggatactctac- 8171268  T
Q  185 gatacgtatc 194  Q
    ||||||||||    
T  8171269 gatacgtatc 8171278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 12580520 - 12580596
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| |||||||||||||||    
T  12580520 gtatcggaaagtatcagataattatattttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg 12580596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 4246059 - 4246006
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  4246059 aaaaataaaatttaatatttggatactcttcggatacgtatcggg-aagtatcgg 4246006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 32759528 - 32759439
Alignment:
Q  117 ggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  32759528 ggacgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacgtatcggg-aagtatcgg 32759439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 5539541 - 5539485
Alignment:
Q  155 aaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||    
T  5539541 aaataaaatttaatatttggatactctccggatacatatcgggcaggtatcggtgca 5539485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 22201304 - 22201379
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||    
T  22201304 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgg 22201379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 36483554 - 36483511
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  36483554 aaaaataaaatttaatatttggatactcttcggatacgtatcgg 36483511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 34901349 - 34901424
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  34901349 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 34901424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 45217219 - 45217262
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  45217219 aaaaataaaatttaatatttggatactctccggatacgtatcgg 45217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 2872909 - 2872962
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||    
T  2872909 aaaaataaaatttcatatttggatactctccggatacgtatcggg-aagtatcgg 2872962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 32425040 - 32424998
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  32425040 aaaaataaaatttaatcttcggatactcttctgatacgtatcg 32424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 32877556 - 32877503
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  32877556 aaaaataaaatttaatatttggatactctcccgatacgtatcggg-aagtatcgg 32877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 43771703 - 43771756
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  43771703 aaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 43771756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 13422326 - 13422283
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||||| ||||||||| || ||||||||||||    
T  13422326 aaaataaaatttaatatttggatactctccgtatacgtatcggg 13422283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 12357997 - 12357939
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||| |  ||||||||||    
T  12357997 aaaaataaaatttaatatttggatactatgctgatacgtatcgggaagatatcggtgca 12357939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 12359125 - 12359067
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||| |  ||||||||||    
T  12359125 aaaaataaaatttaatatttggatactatgctgatacgtatcgggaagatatcggtgca 12359067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 16237205 - 16237155
Alignment:
Q  243 ctgcctagtgtatttttctgcttaatttcaaatagaaatgtgtgttcttga 293  Q
    ||||||||| ||| |||| |||||||||||||||||||||  |||||||||    
T  16237205 ctgcctagtatatgtttccgcttaatttcaaatagaaatggatgttcttga 16237155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 25022244 - 25022191
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | |||||||||| || |||||||||    
T  25022244 aaaaataaaatttaatatttggatactctcccgatacgtatcagg-aagtatcgg 25022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 28876565 - 28876607
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  28876565 aaaaataaaatttaatatttggatactctctggatacgtatcg 28876607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 37372376 - 37372334
Alignment:
Q  155 aaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||| |||||||||||| | |||||||||||||    
T  37372376 aaataaaatttaatcttcggatactctcctgatacgtatcggg 37372334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 42949249 - 42949207
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||||||| ||||||||| | |||||||||||    
T  42949249 aaaaataaaatttaatatttggatactctcccgatacgtatcg 42949207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 27886309 - 27886265
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| |||||| |||||||||||| | |||||||||||||    
T  27886309 aaaaataaactttaatcttcggatactctcctgatacgtatcggg 27886265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 27944967 - 27944923
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| |||||| |||||||||||| | |||||||||||||    
T  27944967 aaaaataaactttaatcttcggatactctcctgatacgtatcggg 27944923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 39957770 - 39957600
Alignment:
Q  66 cacatttatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaattt 165  Q
    |||| |||||||||| || || |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||        |||||||||||||    
T  39957770 cacacttatctgtgcgtatcgtaacaaatagaagtatccttcgcgtatccgggacgtatcggaaagtatcggataattattttttaaaaaaataaaattt 39957671  T
Q  166 aatattcggatactcttcggatacgtatcgggcaagtatcggtgcatgatccattttcaagtatcggggctt 237  Q
    |||||||||||||||| ||||||||||||| | |||||||||  ||| ||||||||| ||||||||||||||    
T  39957670 aatattcggatactctccggatacgtatcgag-aagtatcggaacatcatccattttaaagtatcggggctt 39957600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 24784445 - 24784367
Alignment:
Q  66 cacatttatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataatta 144  Q
    |||| |||||||||| ||  ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  24784445 cacacttatctgtgcgtattggaacaaatagaagtatccttcgcgtatccaggatgtatcggaaagtatctgataatta 24784367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 52122833 - 52122921
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  52122833 gacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 52122921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 38492268 - 38492326
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  38492268 aaaaataaaatttaatatttggatactctccggatacgtatcgggcaggtatcggtgca 38492326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 19738848 - 19738763
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  19738848 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 19738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 53322492 - 53322404
Alignment:
Q  117 ggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcg 206  Q
    |||| |||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  53322492 ggacatatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcg 53322404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 36943822 - 36943730
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||| | ||||||||||||||||        ||||||||| |||||| |||||||||||||| ||||||||||||| | |||||||||||    
T  36943822 acgtatcaggaagtatcagataattatttttaaaaaaaataaattttaatcttcggatactcttctgatacgtatcgggtaggtatcggtgca 36943730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 52721417 - 52721339
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| || ||||||||||||    
T  52721417 acgtatcggaaagtatcggataattattttataaaaaaataaaatttaatatttggatactctccgaatacgtatcggg 52721339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 31946191 - 31946268
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||||| ||||||||||||    
T  31946191 acgtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgg 31946268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 3403552 - 3403628
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||| ||||||||         |||||||||||||||||| ||||||||| |||||||||||||||    
T  3403552 gtatcggaaagtatcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatcggg 3403628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 24793696 - 24793772
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    |||||| || ||||||||||||||||        |||||||||||||||| |||||||||||||| |||||||||||    
T  24793696 acgtattgggaagtatcagataattatttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcg 24793772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 8064076 - 8064151
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  8064076 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 8064151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 36511933 - 36511976
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  36511933 aaaaataaaatttaatcttcggatactcttctgatacgtatcgg 36511976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 5325720 - 5325773
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  5325720 aaaaataaaatttaatatttggatactctccagatacgtatcggg-aagtatcgg 5325773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 40694223 - 40694145
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||||||||||||        |||||||||||||||| ||| |||||||| | |||||||||||||    
T  40694223 acgtatcgggaagtatcagataattattttataaaaaaataaaatttaatcttcagatactctcctgatacgtatcggg 40694145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 42472568 - 42472621
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||    
T  42472568 aaaaataaaatttaatatttggatactctccggatacgtattggg-aagtatcgg 42472621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 17892366 - 17892314
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  17892366 aaaataaaatttaatcttcggatactcttctgatacatatcggg-aagtatcgg 17892314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 4400587 - 4400543
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||||||| |||||||| | |||||||||||||    
T  4400587 aaaaataaaatttaatattctgatactctcctgatacgtatcggg 4400543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 5834949 - 5834905
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||    
T  5834949 aaaaataaaatttaatatttggatactctcccgatacgtatcggg 5834905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 21637784 - 21637740
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||| | |||||||||||||    
T  21637784 aaaaataaaatttaatcttcggatactctcctgatacgtatcggg 21637740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 37992532 - 37992575
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| || ||||||||||| ||||||||||||    
T  37992532 aaaaataaaatttaatctttggatactcttctgatacgtatcgg 37992575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 41145731 - 41145688
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||||||| ||||||||| || |||||||||||    
T  41145731 aaaaataaaatttaatatttggatactctccgaatacgtatcgg 41145688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 14795115 - 14795078
Alignment:
Q  159 aaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  14795115 aaaatttaatatttggatactctccggatacgtatcgg 14795078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 4119504 - 4119556
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatc 205  Q
    ||||||||||||||||  ||||||||||| | |||||||||| |||| |||||    
T  4119504 aaaaataaaatttaattgtcggatactctcccgatacgtatcaggcaggtatc 4119556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 2567310 - 2567454
Alignment:
Q  66 cacatttatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaattt 165  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||||   ||| ||||||||||||||| ||||||||        |||||||||||||    
T  2567310 cacacttatctgtgcgtagcggaataaatagaagtatccttcgcgtattcgggatgtatcggaaagtatcggataattatttttttaaaaaataaaattt 2567409  T
Q  166 aatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||    
T  2567410 aatattcggatactctctggatacgtatcggg-aagtatcggtgca 2567454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 52684401 - 52684277
Alignment:
Q  72 tatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatatt 171  Q
    |||| |||| || |||||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||        |||||||||||||||||||    
T  52684401 tatccgtgcgtatcggaacaaatagaagtatcctttgcgtatccaggacgtatcggaaaatatcggataattattttttttaaaaataaaatttaatatt 52684302  T
Q  172 cggatactcttcggatacgtatcgg 196  Q
    |||||||||| |  |||||||||||    
T  52684301 cggatactctcctaatacgtatcgg 52684277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 22611347 - 22611441
Alignment:
Q  117 ggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  22611347 ggacgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgggcaggtatcggtgca 22611441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 1528611 - 1528549
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgcatgat 215  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||    
T  1528611 aaaaataaaatttaatatttggatactctccggatacgtatcgggcaggtatcgatgcatgat 1528549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 53192607 - 53192549
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  53192607 aaaaataaaatttaatatttggatactctccggatacgtatcgggcaggtatcggtgca 53192549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 40497481 - 40497396
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  40497481 gtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 40497396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 45532979 - 45533032
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  45532979 aaaaataaaatttaatatttggatactcttcggatacgtatcggg-aagtatcgg 45533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 28968663 - 28968576
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  28968663 acgtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcggg-aagtatcgg 28968576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 37996778 - 37996854
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| |||||||||||||||    
T  37996778 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg 37996854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 47642159 - 47642068
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||| ||||||||||||||||         ||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||    
T  47642159 acgtatcgggaagtatcagataattatttttttataaaataaaatttaatcttcggatactcttctgatacgtattggg-aagtatcggtgca 47642068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 52505832 - 52505876
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  52505832 aaaaataaaatttaatatttggatactcttcggatacgtatcggg 52505876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 1679697 - 1679750
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  1679697 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 1679750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 10225161 - 10225218
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||    
T  10225161 aaaaataaaatttaatatttggatactctccggatacgtatc-ggaaagtatcggtgca 10225218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 45347416 - 45347374
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  45347416 aaaaataaaatttaatcttcggatactcttcggatacgtatcg 45347374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 7899718 - 7899762
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  7899718 aaaaataaaatttaatcttcggatactcttctgatacgtatcggg 7899762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 13748413 - 13748489
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||| ||||||||||||||||        |||||||||||||||| |||||||||||||| ||||||||||||    
T  13748413 acgtatcgggaagtatcagataattattttaaa-aaaaataaaatttaatcttcggatactcttctgatacgtatcgg 13748489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 42464909 - 42464959
Alignment:
Q  156 aataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  42464909 aataaaaattaatatttggatactcttcggatacgtatcggg-aagtatcgg 42464959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 7327831 - 7327778
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  7327831 aaaaataaaatttaatatttggatactatccggatacgtatcggg-aagtatcgg 7327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 19349599 - 19349657
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||| |||||||||| |||| ||||||||| ||||||||||||||| ||||| |||||    
T  19349599 aaaaaaaaaatttaatcttcgtatactcttctgatacgtatcgggcaggtatcagtgca 19349657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 19421569 - 19421491
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||| | |||||||||||||    
T  19421569 acgtatcgggaagtatcggataattactttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcggg 19421491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 35389869 - 35389816
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  35389869 aaaaataaaatttaatatttggatactctcccgatacgtatcggg-aagtatcgg 35389816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 42229793 - 42229740
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||| |||||||||||||| |||||||||| || |||||||||    
T  42229793 aaaaataaaatttaattttcggatactcttctgatacgtatcagg-aagtatcgg 42229740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 21006424 - 21006552
Alignment:
Q  85 cggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaa--aaataaaatttaatattcggatactctt 182  Q
    ||||||||||||||||||| ||||||||||  | |||||| | |||||||| ||||||||            ||||||| |||||||||||||||||||     
T  21006424 cggaacaaatagaagtatcattcgcgtatccggaacgtatagaaaagtatcggataattattttttttttttaaataaattttaatattcggatactctc 21006523  T
Q  183 cggatacgtatcgggcaagtatcggtgca 211  Q
    || |||||| ||||||| |||||| ||||    
T  21006524 cgaatacgtgtcgggcaggtatcgatgca 21006552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 53165509 - 53165570
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgcatgat 215  Q
    |||||||||| |||| ||||||| |||||| ||||||||||||| | ||||| |||||||||    
T  53165509 aaaataaaatataatcttcggatgctcttctgatacgtatcgggaaggtatcagtgcatgat 53165570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 55268982 - 55269059
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||| | |||||||||||||    
T  55268982 cgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcggg 55269059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 3983816 - 3983772
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||| | |||||||||||||    
T  3983816 aaaaataaaatttaatcttcggatactctcctgatacgtatcggg 3983772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 19879068 - 19879160
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||| ||||||| ||||||||        |||||||||||| ||| |||||||||||| |  |||| ||||||||| |||||||||||    
T  19879068 acgtatcgggaagtatcggataattatttttttaaaaaataaaattgaatcttcggatactctccttatacatatcgggcaggtatcggtgca 19879160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 28882644 - 28882720
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| || |||||        ||||||||||||||||||| ||||||||| | ||||||||||||    
T  28882644 cgtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgg 28882720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 48122944 - 48122900
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||    
T  48122944 aaaaataaaatttaatatttggatactctctggatacgtatcggg 48122900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 5271588 - 5271533
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggt 208  Q
    |||||||||||||||| | |||||||||| | ||||||||||||| | ||||||||    
T  5271588 aaaaataaaatttaatctccggatactctcctgatacgtatcgggaaggtatcggt 5271533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 33240069 - 33240016
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||| |||||||||    
T  33240069 aaaaataaaatataatatttggatactctcccgatacgtatcggg-aagtatcgg 33240016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 52121299 - 52121257
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||||||| ||||||||| | |||||||||||    
T  52121299 aaaaataaaatttaatatttggatactctcccgatacgtatcg 52121257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 30787562 - 30787603
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||| |||||||||||| | |||||||||||    
T  30787562 aaaataaaatttaatcttcggatactctcctgatacgtatcg 30787603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 41742071 - 41742115
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||| | |||| ||||||||    
T  41742071 aaaaataaaatttaatcttcggatactctccagatatgtatcggg 41742115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 45159227 - 45159353
Alignment:
Q  72 tatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatatt 171  Q
    |||| |||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||        |||||||||||||||||||    
T  45159227 tatccgtgcgtatcggaacaaatagaagtatccttcgcgtatccaggacgtatcggaaagtatcggataagta-tttttttaaaaataaaatttaatatt 45159325  T
Q  172 cggatactcttcggatacgtatcgggca 199  Q
    || ||||||||| |||||||||||||||    
T  45159326 cgaatactcttcagatacgtatcgggca 45159353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 20536884 - 20536826
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20536884 aaaaataaaatttaatatttggatactcttccgatacgtatcgggcaagtatcggtgca 20536826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 33324972 - 33324884
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  33324972 gacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 33324884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 38602286 - 38602374
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||| |||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  38602286 gacgtattggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 38602374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 7876865 - 7876780
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  7876865 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 7876780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 16561919 - 16561866
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  16561919 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 16561866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 22484386 - 22484333
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  22484386 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 22484333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 40308896 - 40308949
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  40308896 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 40308949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 14824256 - 14824195
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgcatgat 215  Q
    ||||||||||||||| |||||||||||||| |||||||||| | ||  ||||||||||||||    
T  14824256 aaaataaaatttaatcttcggatactcttctgatacgtatcagacagatatcggtgcatgat 14824195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 3563993 - 3563902
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||| ||||||||||||||||        | |||||||||||||| |||||||||||| | ||||||||||||| ||||||| |||||    
T  3563993 acgtatcgggaagtatcagataattattttttaaagaaataaaatttaatcttcggatactctcctgatacgtatcggg-aagtatcagtgca 3563902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 4170501 - 4170545
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  4170501 aaaaataaaatttaatatttggatactctccggatacgtatcggg 4170545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 6497648 - 6497692
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  6497648 aaaaataaaatttaatatttggatactctccggatacgtatcggg 6497692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 1776435 - 1776478
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  1776435 aaaaataaaatttaatcttcggatactcttctgatacgtatcgg 1776478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 8482916 - 8482959
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  8482916 aaaaataaaatttaatcttcggatactcttctgatacgtatcgg 8482959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 4561907 - 4561854
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||| |||||||||||||| |||| |||||||| |||||||||    
T  4561907 aaaaataaaatttaatcttcggatactcttctgatatgtatcggg-aagtatcgg 4561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 6124292 - 6124239
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  6124292 aaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 6124239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 2319394 - 2319353
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatc 194  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  2319394 aaaaataaaatttaatcttcggatactcttctgatacgtatc 2319353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 7807373 - 7807425
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcg 206  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||    
T  7807373 aaaaataaaatttaatatttggatactttccggatacgtatcggg-aagtatcg 7807425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 40536350 - 40536293
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||||||  || |||||||||| ||||||||||||| | |||||||||||    
T  40536350 aaaataaaatttaatgatctgatactcttccgatacgtatcgggtaggtatcggtgca 40536293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 35342436 - 35342392
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||||  |||||||||||||    
T  35342436 aaaaataaaatttaatcttcggatactcttttgatacgtatcggg 35342392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 44156716 - 44156672
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||| | |||||||||||||    
T  44156716 aaaaataaaatttaatcttcggatactctcctgatacgtatcggg 44156672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 18301091 - 18301049
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||||||| ||||||||| | |||||||||||    
T  18301091 aaaaataaaatttaatatttggatactctcccgatacgtatcg 18301049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 22571054 - 22571003
Alignment:
Q  155 aaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||| ||||||||  |||||||||||| || |||||||||    
T  22571054 aaataaaatttaatatttggatactccccggatacgtatcagg-aagtatcgg 22571003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 31236185 - 31236229
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||| ||||||||||| |||||||||||| | |||||||||||||    
T  31236185 aaaattaaaatttaatcttcggatactctcctgatacgtatcggg 31236229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 34146299 - 34146255
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| || ||||||||| | |||||||||||||    
T  34146299 aaaaataaaatttaatctttggatactctcctgatacgtatcggg 34146255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 40497384 - 40497428
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| || ||||||||| | |||||||||||||    
T  40497384 aaaaataaaatttaatctttggatactctcctgatacgtatcggg 40497428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 25969582 - 25969460
Alignment:
Q  85 cggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataatta-nnnnnnnnaaaaataaaatttaatattcggatactcttc 183  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||         ||||||||||||||||||| ||||||||| |    
T  25969582 cggaacaaatagaagtatccttcgcgtatccgggacgtatcggaaagtatcggataattattttataaaaaaaataaaatttaatatttggatactctcc 25969483  T
Q  184 ggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||| |||||||||    
T  25969482 ggatacgtatcggg-aagtatcgg 25969460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 85 - 207
Target Start/End: Original strand, 9250351 - 9250474
Alignment:
Q  85 cggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataatta--nnnnnnnnaaaaataaaatttaatattcggatactctt 182  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||          ||||||||||||||||||| |||||||||     
T  9250351 cggaacaaatagaagtatccttcgcgtatccgggacgtatcggaaagtatcggataattattttaataaaaaaaataaaatttaatatttggatactctc 9250450  T
Q  183 cggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| |||||||||    
T  9250451 cggatacgtatcggg-aagtatcgg 9250474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 36202754 - 36202845
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||    
T  36202754 cgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggcaggcatcggtgca 36202845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 42897140 - 42897050
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  42897140 cgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcggtgca 42897050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 38263150 - 38263072
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||    
T  38263150 gacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgg 38263072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 48163561 - 48163471
Alignment:
Q  116 aggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||| ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  48163561 aggatgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 48163471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 27354069 - 27353984
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  27354069 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 27353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 27555336 - 27555421
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  27555336 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 27555421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 39520905 - 39520848
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  39520905 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcggtgca 39520848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 11829841 - 11829765
Alignment:
Q  117 ggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtat 193  Q
    ||||||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| |||||||||||    
T  11829841 ggacgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtat 11829765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 47720171 - 47720215
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  47720171 aaaaataaaatttaatattcggatactctccggatacgtatcggg 47720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 16850934 - 16850859
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||||| ||||||||||||    
T  16850934 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcagatacgtatcgg 16850859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 47238616 - 47238674
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| | ||||| ||||||||| |||||||||||    
T  47238616 aaaaataaaatttaatatttggatactctccagatacatatcgggcaggtatcggtgca 47238674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 34238306 - 34238231
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| || |||||||||||    
T  34238306 gtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccgaatacgtatcgg 34238231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 40095798 - 40095723
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  40095798 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 40095723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 34122616 - 34122669
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  34122616 aaaaataaaatttaatatttggatactctccagatacgtatcggg-aagtatcgg 34122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 47720094 - 47720156
Alignment:
Q  66 cacatttatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcgga 128  Q
    |||| ||||| |||| || | ||||||||||||||||||||||||||||  ||||||||||||    
T  47720094 cacacttatccgtgcgtatcagaacaaatagaagtatccttcgcgtatccgggacgtatcgga 47720156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 16564378 - 16564422
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||    
T  16564378 aaaaataaaatttaatatttggatactctcccgatacgtatcggg 16564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 16601284 - 16601240
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||    
T  16601284 aaaaataaaatttaatatttggatactctcccgatacgtatcggg 16601240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 26973203 - 26973127
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||| ||||||| ||||||||        ||||| |||||||||| |||||||||||||| |||||||||||    
T  26973203 acgtatcgggaagtatcggataattatttaaaaaaaaaaaaaaatttaatcttcggatactcttctgatacgtatcg 26973127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 1043070 - 1043113
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||    
T  1043070 aaaaataaaatttaatatttggatactctcccgatacgtatcgg 1043113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 26773674 - 26773753
Alignment:
Q  116 aggacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    |||| |||| ||||||||||||| |||||        ||||||||||||||||||| ||||||||| | |||||||||||    
T  26773674 aggatgtattggaaagtatcagaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcg 26773753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 35159980 - 35159937
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||| |||||||||||| | |||||||||||||    
T  35159980 aaaataaaatttaatcttcggatactctcctgatacgtatcggg 35159937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 554889 - 554947
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||||||| |||| ||||||| | |||||||||| || | |||||||||||    
T  554889 aaaaataaaatttaatcttcgaatactctcctgatacgtatcaggaaggtatcggtgca 554947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 1363011 - 1363053
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||| ||||||||||||||| | |||||||||||    
T  1363011 aaaaataaaatttcatattcggatactctcctgatacgtatcg 1363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 36660594 - 36660536
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| | |||||||  ||||||||||||| || |||| ||||||    
T  36660594 aaaaataaaatttaatatttgaatactctctggatacgtatcggacaggtattggtgca 36660536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 7416729 - 7416684
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcgggca 199  Q
    ||||||||||||||| |||||||||||| | |||||||||| ||||    
T  7416729 aaaataaaatttaatcttcggatactctcctgatacgtatcaggca 7416684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26845866 - 26845939
Alignment:
Q  124 tcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||| ||||||||        ||||||||||||||||||| ||||||||| |  ||||||||||||    
T  26845866 tcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccaaatacgtatcggg 26845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 27688010 - 27688051
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  27688010 aaaataaaatttaatcttcggatactcttcttatacgtatcg 27688051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 21409507 - 21409463
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| || ||||||||| | |||||||||||||    
T  21409507 aaaaataaaatttaatctttggatactctcctgatacgtatcggg 21409463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 23311838 - 23311794
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| |||||||||||| | ||||| |||||||    
T  23311838 aaaaataaaatttaatcttcggatactctcctgatacatatcggg 23311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 27398046 - 27398082
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatac 189  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  27398046 aaaaataaaatttaatatttggatactctccggatac 27398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 40041494 - 40041454
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatc 194  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  40041494 aaaataaaatttaatcttcggatactctcctgatacgtatc 40041454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 44960134 - 44960178
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    |||||||||||||||| || ||||||||||| ||||| |||||||    
T  44960134 aaaaataaaatttaatctttggatactcttctgatacatatcggg 44960178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 85 - 207
Target Start/End: Original strand, 30777452 - 30777574
Alignment:
Q  85 cggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataatta-nnnnnnnnaaaaataaaatttaatattcggatactcttc 183  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||         ||||||||||||||||||| ||||||||| |    
T  30777452 cggaacaaatagaagtatccttcgcgtatccgggacgtatcggaaagtatcggataattattttataaaaaaaataaaatttaatatttggatactctcc 30777551  T
Q  184 ggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||| |||||||||    
T  30777552 ggatacgtatcggg-aagtatcgg 30777574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 6243085 - 6243225
Alignment:
Q  72 tatctgtgcatagcggaacaaatagaagtatccttcgcgtatctaggacgtatcggaaagtatcagataattannnnnnnn--aaaaataaaatttaata 169  Q
    |||| |||| || ||||||||||| ||||||||||||||||||  |||||||||| ||| |||| ||||||||          |||||||||||||||||    
T  6243085 tatccgtgcgtatcggaacaaatataagtatccttcgcgtatccgggacgtatcgaaaaatatcggataattattttttttttaaaaataaaatttaata 6243184  T
Q  170 ttcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||| |||||||||||| || |||||||||||||    
T  6243185 ttcggatactctccggatacgtatc-ggaaagtatcggtgca 6243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 32707795 - 32707883
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  32707795 gacgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 32707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 1639781 - 1639834
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  1639781 aaaaataaaatttaatatttggatactcttcggatacgtatcggg-aagtatcgg 1639834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 7977360 - 7977302
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    |||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||    
T  7977360 aaaaataaaatttaatatttagatactctccgaatacgtatcgggcaagtatcggtgca 7977302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 11906337 - 11906284
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  11906337 aaaaataaaatttaatattcggatactctccggatacgtatcggg-aagtatcgg 11906284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 32625027 - 32624943
Alignment:
Q  122 tatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||| ||||||||        ||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  32625027 tatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactcttcgaatacgtatcggg-aagtatcgg 32624943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 12852227 - 12852170
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||    
T  12852227 aaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcggtgca 12852170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 26716426 - 26716348
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||||| |||||||||||||    
T  26716426 acgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggg 26716348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 26795003 - 26795060
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||    
T  26795003 aaaaataaaatttaatatttggatactctccggatacgtatc-ggaaagtatcggtgca 26795060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 26986166 - 26986088
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||||| |||||||||||||    
T  26986166 acgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggg 26986088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 39690730 - 39690815
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  39690730 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 39690815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 1795511 - 1795468
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  1795511 aaaaataaaatttaatcttcggatactcttctgatacgtatcgg 1795468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 9792438 - 9792385
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| |||||||||    
T  9792438 aaaaataaaatttaatatttggatactctctggatacgtatcggg-aagtatcgg 9792385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 17138219 - 17138297
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||||||||||||        |||||||||||||||| |||||||| ||| | |||||||||||||    
T  17138219 acgtatcgggaagtatcagataattactttttaaaaaaataaaatttaatcttcggatattctcctgatacgtatcggg 17138297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 32728708 - 32728761
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||| |||||||||    
T  32728708 aaaaataaaatctaatatttggatactctccggatacgtatcggg-aagtatcgg 32728761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 33829872 - 33829828
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||    
T  33829872 aaaaaaaaaatttaatatttggatactctccggatacgtatcggg 33829828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 3934787 - 3934830
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| |||||||||||| | ||||||||||||    
T  3934787 aaaaataaaatttaatcttcggatactctcctgatacgtatcgg 3934830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 14836500 - 14836457
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||    
T  14836500 aaaaaaaaaaattaatattcggatactcttctgatacgtatcgg 14836457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 21251584 - 21251541
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||| |||||||||||||||||||||| | ||||||||||||    
T  21251584 aaaaattaaatttaatattcggatactctcctgatacgtatcgg 21251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 30284607 - 30284650
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||| |||||||||||| | |||||||||||||    
T  30284607 aaaataaaatttaatcttcggatactctcctgatacgtatcggg 30284650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 26691769 - 26691691
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| ||||||||||||   |||||||||||||    
T  26691769 acgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcggg 26691691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 26961501 - 26961423
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| ||||||||||||   |||||||||||||    
T  26961501 acgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcggg 26961423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 41392679 - 41392764
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||         |||||||||||||||||| ||||||||  ||||||| ||||||| |||||||||    
T  41392679 gtatcggaaagtatcagattattatttttttttaaaataaaatttaatatttggatactccccggatacatatcggg-aagtatcgg 41392764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 34032521 - 34032444
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||| || ||||||||||||||||        |||||||||| ||||| |||||||||||| | |||||||||||||    
T  34032521 cgtattgggaagtatcagataattatttttttaaaaaataaaaattaatcttcggatactctcctgatacgtatcggg 34032444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 19102464 - 19102508
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||  ||| ||||||||| |||||||||||||    
T  19102464 aaaaataaaatttaattgtcgtatactcttctgatacgtatcggg 19102508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 27938278 - 27938242
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatac 189  Q
    |||||||||||||||| |||||||||||||| |||||    
T  27938278 aaaaataaaatttaatcttcggatactcttctgatac 27938242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 36367669 - 36367759
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  36367669 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggcaggtatcggtgca 36367759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 1043381 - 1043293
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  1043381 gacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 1043293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 1036613 - 1036535
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||    
T  1036613 gacgtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgg 1036535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 20409553 - 20409606
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  20409553 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 20409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 28949208 - 28949293
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  28949208 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 28949293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 37104271 - 37104186
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  37104271 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 37104186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 8132302 - 8132250
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcg 206  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  8132302 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcg 8132250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 28659265 - 28659342
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||| ||||| ||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||    
T  28659265 acgtatcggaacgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgg 28659342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 2364796 - 2364753
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  2364796 aaaaataaaatttaatcttcggatactcttctgatacgtatcgg 2364753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 6916841 - 6916916
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  6916841 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 6916916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 38330578 - 38330503
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  38330578 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 38330503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 52895680 - 52895755
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  52895680 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 52895755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 3426967 - 3426914
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  3426967 aaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 3426914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 13012991 - 13013044
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  13012991 aaaaataaaatttaatatttggatactctcccgatacgtatcggg-aagtatcgg 13013044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 25256735 - 25256682
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||| |||||||||    
T  25256735 aaaaataaaatttaatatttgaatactctccggatacgtatcggg-aagtatcgg 25256682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 30323834 - 30323781
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  30323834 aaaaataaaatttaatatttggatactctccagatacgtatcggg-aagtatcgg 30323781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 31653401 - 31653454
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  31653401 aaaaataaaatttaatatttggatactctcccgatacgtatcggg-aagtatcgg 31653454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 38948851 - 38948809
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcg 195  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  38948851 aaaaataaaatttaatatttggatattcttcggatacgtatcg 38948809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 38218502 - 38218461
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatc 194  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  38218502 aaaaataaaatttaatcttcggatactcttctgatacgtatc 38218461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 14167202 - 14167162
Alignment:
Q  154 aaaataaaatttaatattcggatactcttcggatacgtatc 194  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  14167202 aaaataaaatttaatcttcggatactcttctgatacgtatc 14167162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 37346847 - 37346900
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||| |||||||||    
T  37346847 aaaaataaaatttaatatttggatactcccccgatacgtatcggg-aagtatcgg 37346900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 9092494 - 9092543
Alignment:
Q  155 aaataaaatttaatattcggatactcttcggatacgtatcgggcaagtat 204  Q
    |||||||||||||| |||||||||||| | |||||||||| |||| ||||    
T  9092494 aaataaaatttaatcttcggatactctcctgatacgtatcaggcaggtat 9092543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 34432382 - 34432423
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatc 194  Q
    |||||||||||||||| |||||||||||| | ||||||||||    
T  34432382 aaaaataaaatttaatcttcggatactctcctgatacgtatc 34432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 5984346 - 5984306
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtat 193  Q
    ||||||||||||||||||| ||||||||| | |||||||||    
T  5984346 aaaaataaaatttaatatttggatactctccagatacgtat 5984306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 14334279 - 14334235
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||||    
T  14334279 aaaaataaaatttaatatttggatactctcccaatacgtatcggg 14334235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 32381058 - 32381098
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtat 193  Q
    |||||||||||||||| |||||||||||| | |||||||||    
T  32381058 aaaaataaaatttaatcttcggatactctcctgatacgtat 32381098  T

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Target: scaffold0640 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 8056 - 8144
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  8056 gacgtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 8144  T

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Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 8357112 - 8357024
Alignment:
Q  118 gacgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8357112 gacgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcggg-aagtatcgg 8357024  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 7255037 - 7254977
Alignment:
Q  155 aaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgcatgat 215  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||    
T  7255037 aaataaaatttaatcttcggatactcttctgatacgtatcgggcatgtatcggtgcatgat 7254977  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 3212596 - 3212543
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  3212596 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcgg 3212543  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 31195836 - 31195921
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  31195836 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccagatacgtatcggg-aagtatcgg 31195921  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 19128306 - 19128229
Alignment:
Q  119 acgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||| ||||||| ||||||||        |||||||||||||||| |||||||||||||| ||||||||||||    
T  19128306 acgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgg 19128229  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 10894584 - 10894644
Alignment:
Q  155 aaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgcatgat 215  Q
    |||||||||||||| || ||||||||| | |||||||||| |||| |||||||||||||||    
T  10894584 aaataaaatttaatctttggatactctcctgatacgtatcaggcaggtatcggtgcatgat 10894644  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 1036793 - 1036868
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||||| ||||||||        |||||||||||||||||||  |||||||| ||||||||||||||    
T  1036793 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcgg 1036868  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 7188778 - 7188819
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatc 194  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  7188778 aaaaataaaatttaatatttggatactctccggatacgtatc 7188819  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 32130658 - 32130702
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||    
T  32130658 aaaaataaaatttaatatttggatactctcctgatacgtatcggg 32130702  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 21113579 - 21113632
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcg 206  Q
    ||||||||||||||||  ||||||||||||  |||||| ||||| |||||||||    
T  21113579 aaaaataaaatttaatcatcggatactcttttgatacgcatcggacaagtatcg 21113632  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 32018096 - 32018056
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtat 193  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  32018096 aaaaataaaatttaatattcatatactctacggatacgtat 32018056  T

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Target: scaffold0177 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 25540 - 25597
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  25540 aaaaataaaatttaatatttggatactctccggatacgtatcggg-aagtatcggtgca 25597  T

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Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 27790 - 27848
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| || |||||||||||    
T  27790 aaaaataaaatttaatatttggatactctgcggatacgtatcggacaggtatcggtgca 27848  T

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Target: scaffold0250 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 5664 - 5578
Alignment:
Q  120 cgtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    |||||||||||||||| || |||||        ||||||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  5664 cgtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggg-aagtatcgg 5578  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 42075 - 42132
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcggtgca 211  Q
    ||||||||||||||||||| |||||||||   ||||||||||||| |||||||||||||    
T  42075 aaaaataaaatttaatatttggatactctctagatacgtatcggg-aagtatcggtgca 42132  T

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Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 30411 - 30496
Alignment:
Q  121 gtatcggaaagtatcagataattannnnnnnnaaaaataaaatttaatattcggatactcttcggatacgtatcgggcaagtatcgg 207  Q
    ||||||||||||||| ||||||||         |||||||||||||||||| ||||||||| |||||||||||| || |||||||||    
T  30411 gtatcggaaagtatcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatcagg-aagtatcgg 30496  T

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Target: scaffold0406 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 13975 - 13931
Alignment:
Q  153 aaaaataaaatttaatattcggatactcttcggatacgtatcggg 197  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||    
T  13975 aaaaaaaaaatttaatatttggatactctccggatacgtatcggg 13931  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 44616 - 44653
Alignment:
Q  159 aaaatttaatattcggatactcttcggatacgtatcgg 196  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  44616 aaaatttaatatttggatactctccggatacgtatcgg 44653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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