View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15254_low_13 (Length: 555)

Name: NF15254_low_13
Description: NF15254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15254_low_13
NF15254_low_13
[»] chr6 (59 HSPs)
chr6 (239-543)||(26138244-26138548)
chr6 (243-541)||(26017493-26017792)
chr6 (243-541)||(26156866-26157165)
chr6 (16-197)||(26138037-26138218)
chr6 (13-197)||(26017264-26017448)
chr6 (13-197)||(26156637-26156821)
chr6 (353-543)||(25507288-25507478)
chr6 (351-488)||(18234089-18234226)
chr6 (351-477)||(29253628-29253754)
chr6 (351-503)||(23517585-23517738)
chr6 (351-503)||(23574910-23575063)
chr6 (351-492)||(17739315-17739456)
chr6 (351-477)||(5949958-5950084)
chr6 (351-488)||(12660733-12660870)
chr6 (351-488)||(13217570-13217707)
chr6 (351-474)||(5398871-5398995)
chr6 (428-543)||(5398998-5399112)
chr6 (351-543)||(17284256-17284450)
chr6 (351-465)||(12658264-12658378)
chr6 (351-488)||(18399903-18400040)
chr6 (351-474)||(25963560-25963684)
chr6 (351-474)||(25968207-25968331)
chr6 (359-474)||(32542903-32543019)
chr6 (351-450)||(19613084-19613183)
chr6 (351-450)||(20463968-20464067)
chr6 (351-465)||(17794232-17794346)
chr6 (351-474)||(25948960-25949084)
chr6 (428-519)||(5949867-5949958)
chr6 (351-450)||(15471451-15471550)
chr6 (436-534)||(29253762-29253860)
chr6 (436-543)||(25949095-25949203)
chr6 (351-450)||(18973307-18973406)
chr6 (436-503)||(25963695-25963762)
chr6 (436-503)||(25968342-25968409)
chr6 (436-503)||(32543030-32543097)
chr6 (351-413)||(25339560-25339622)
chr6 (351-464)||(3923346-3923459)
chr6 (351-450)||(15161856-15161955)
chr6 (351-450)||(15171863-15171962)
chr6 (351-412)||(23348527-23348588)
chr6 (351-412)||(26821551-26821612)
chr6 (351-467)||(18627103-18627218)
chr6 (366-465)||(20222599-20222698)
chr6 (366-465)||(22116583-22116682)
chr6 (351-414)||(29093234-29093297)
chr6 (359-414)||(29360006-29360061)
chr6 (351-412)||(24393263-24393324)
chr6 (359-414)||(6794647-6794702)
chr6 (351-414)||(19993270-19993333)
chr6 (359-414)||(30244943-30244998)
chr6 (359-413)||(19564216-19564270)
chr6 (373-447)||(20222182-20222256)
chr6 (373-447)||(22116166-22116240)
chr6 (351-465)||(25031508-25031622)
chr6 (359-413)||(25631108-25631162)
chr6 (351-413)||(25923739-25923801)
chr6 (356-413)||(24545964-24546021)
chr6 (365-413)||(1122829-1122877)
chr6 (365-413)||(23603640-23603688)
[»] scaffold0098 (1 HSPs)
scaffold0098 (351-530)||(44502-44681)
[»] chr3 (43 HSPs)
chr3 (351-534)||(22038571-22038754)
chr3 (351-488)||(34053879-34054016)
chr3 (351-477)||(25766018-25766144)
chr3 (351-477)||(19567325-19567450)
chr3 (351-474)||(13601380-13601503)
chr3 (454-532)||(13601521-13601599)
chr3 (351-492)||(17022929-17023070)
chr3 (351-474)||(14661093-14661217)
chr3 (351-492)||(20225522-20225662)
chr3 (359-467)||(25054678-25054787)
chr3 (359-474)||(3250385-3250501)
chr3 (436-543)||(14495007-14495114)
chr3 (359-464)||(11398535-11398641)
chr3 (351-474)||(14495125-14495249)
chr3 (428-543)||(19567210-19567325)
chr3 (351-447)||(17050426-17050522)
chr3 (351-450)||(41546101-41546200)
chr3 (359-463)||(3245372-3245477)
chr3 (351-448)||(8686207-8686304)
chr3 (436-543)||(14660975-14661082)
chr3 (351-465)||(8531596-8531710)
chr3 (351-443)||(17041407-17041499)
chr3 (352-465)||(11870135-11870245)
chr3 (436-503)||(25054807-25054874)
chr3 (436-503)||(36075967-36076034)
chr3 (437-503)||(11398662-11398728)
chr3 (359-474)||(36075840-36075956)
chr3 (351-450)||(16703457-16703556)
chr3 (351-414)||(40846472-40846535)
chr3 (436-502)||(3245284-3245350)
chr3 (351-413)||(42244899-42244961)
chr3 (351-450)||(7908196-7908295)
chr3 (351-414)||(11827764-11827827)
chr3 (351-450)||(27406883-27406982)
chr3 (359-414)||(27879922-27879977)
chr3 (358-412)||(27993181-27993236)
chr3 (371-413)||(13298111-13298153)
chr3 (365-413)||(3226550-3226598)
chr3 (365-413)||(4829769-4829817)
chr3 (365-413)||(13664802-13664850)
chr3 (365-413)||(13690933-13690981)
chr3 (365-413)||(14094629-14094677)
chr3 (365-413)||(15429593-15429641)
[»] chr7 (67 HSPs)
chr7 (351-543)||(6257723-6257915)
chr7 (351-474)||(1462209-1462332)
chr7 (354-488)||(4461012-4461146)
chr7 (351-477)||(19515686-19515812)
chr7 (351-474)||(21005787-21005911)
chr7 (351-474)||(48713113-48713236)
chr7 (428-533)||(9194210-9194315)
chr7 (351-474)||(9194318-9194441)
chr7 (428-536)||(48713239-48713348)
chr7 (432-543)||(9264595-9264706)
chr7 (351-477)||(9004270-9004396)
chr7 (352-488)||(11484131-11484267)
chr7 (351-474)||(16463534-16463658)
chr7 (428-543)||(9004396-9004511)
chr7 (351-474)||(10204326-10204450)
chr7 (351-474)||(48355898-48356022)
chr7 (436-534)||(1462343-1462442)
chr7 (359-465)||(9192467-9192574)
chr7 (351-465)||(17911265-17911379)
chr7 (351-444)||(8880345-8880438)
chr7 (351-467)||(14942045-14942161)
chr7 (351-467)||(15369638-15369754)
chr7 (428-517)||(21005695-21005784)
chr7 (359-474)||(13434527-13434643)
chr7 (436-543)||(14941920-14942027)
chr7 (436-543)||(15369513-15369620)
chr7 (351-470)||(9264717-9264836)
chr7 (351-465)||(4540884-4540998)
chr7 (351-444)||(16897626-16897719)
chr7 (359-474)||(649095-649211)
chr7 (359-474)||(4307513-4307629)
chr7 (359-474)||(4312883-4312999)
chr7 (351-474)||(25181278-25181402)
chr7 (437-543)||(10204462-10204568)
chr7 (351-450)||(30064300-30064399)
chr7 (359-444)||(15707580-15707665)
chr7 (436-543)||(4313010-4313117)
chr7 (436-543)||(25181160-25181267)
chr7 (351-465)||(4983420-4983534)
chr7 (436-504)||(15707470-15707538)
chr7 (436-543)||(19515571-19515678)
chr7 (359-474)||(33612577-33612693)
chr7 (436-503)||(4307640-4307707)
chr7 (351-450)||(4467319-4467418)
chr7 (436-519)||(33609485-33609568)
chr7 (374-474)||(33609373-33609474)
chr7 (437-501)||(16897519-16897583)
chr7 (436-503)||(8880187-8880254)
chr7 (436-503)||(13434654-13434721)
chr7 (356-474)||(46274035-46274154)
chr7 (437-503)||(35964473-35964539)
chr7 (437-502)||(649018-649083)
chr7 (351-450)||(4256928-4257025)
chr7 (358-466)||(15522671-15522779)
chr7 (394-465)||(35964560-35964632)
chr7 (436-492)||(48355831-48355887)
chr7 (358-413)||(680319-680374)
chr7 (365-432)||(1611715-1611782)
chr7 (436-503)||(16463456-16463523)
chr7 (439-502)||(33612501-33612563)
chr7 (351-413)||(5825729-5825791)
chr7 (351-413)||(21062967-21063029)
chr7 (365-413)||(23203491-23203539)
chr7 (365-413)||(23509618-23509666)
chr7 (365-413)||(23515400-23515448)
chr7 (358-414)||(38877030-38877086)
chr7 (365-413)||(41113178-41113226)
[»] scaffold0264 (1 HSPs)
scaffold0264 (351-535)||(22621-22809)
[»] scaffold0713 (2 HSPs)
scaffold0713 (266-475)||(6950-7180)
scaffold0713 (486-523)||(6924-6961)
[»] chr5 (24 HSPs)
chr5 (351-492)||(2953797-2953938)
chr5 (351-474)||(25486009-25486132)
chr5 (363-474)||(20104255-20104366)
chr5 (433-543)||(20104136-20104247)
chr5 (351-488)||(16676772-16676909)
chr5 (351-474)||(20967405-20967529)
chr5 (351-474)||(23343851-23343975)
chr5 (436-543)||(20967540-20967647)
chr5 (436-535)||(23343742-23343840)
chr5 (351-450)||(24143521-24143620)
chr5 (429-503)||(20738115-20738189)
chr5 (351-465)||(24164674-24164788)
chr5 (436-535)||(15059225-15059324)
chr5 (359-474)||(15059098-15059214)
chr5 (428-543)||(21273408-21273523)
chr5 (351-399)||(21497345-21497393)
chr5 (351-450)||(12410201-12410300)
chr5 (351-414)||(34223468-34223531)
chr5 (351-413)||(23029986-23030047)
chr5 (351-466)||(22170459-22170574)
chr5 (351-414)||(22940773-22940836)
chr5 (353-414)||(31414319-31414381)
chr5 (351-413)||(31758474-31758536)
chr5 (365-413)||(41766081-41766129)
[»] chr4 (40 HSPs)
chr4 (351-503)||(38651831-38651983)
chr4 (428-536)||(10730916-10731023)
chr4 (428-536)||(10944685-10944792)
chr4 (351-465)||(24125538-24125653)
chr4 (351-474)||(10730791-10730913)
chr4 (351-474)||(10944560-10944682)
chr4 (351-474)||(11902934-11903058)
chr4 (351-474)||(45234005-45234129)
chr4 (351-474)||(13621976-13622099)
chr4 (351-465)||(5513937-5514051)
chr4 (436-543)||(24125412-24125519)
chr4 (394-477)||(11889309-11889392)
chr4 (359-474)||(15409696-15409812)
chr4 (351-450)||(5675104-5675203)
chr4 (356-465)||(22181326-22181435)
chr4 (351-474)||(45244574-45244703)
chr4 (436-543)||(21275024-21275131)
chr4 (351-450)||(33331367-33331466)
chr4 (351-444)||(3772544-3772637)
chr4 (352-465)||(11922718-11922831)
chr4 (436-492)||(11902867-11902923)
chr4 (436-543)||(15409823-15409930)
chr4 (436-504)||(45233926-45233994)
chr4 (351-426)||(9488708-9488783)
chr4 (436-503)||(31593664-31593731)
chr4 (351-413)||(16212695-16212757)
chr4 (436-501)||(45244498-45244563)
chr4 (441-501)||(3772439-3772499)
chr4 (435-488)||(11889249-11889302)
chr4 (355-443)||(31593534-31593621)
chr4 (351-404)||(12346308-12346361)
chr4 (456-503)||(13622109-13622156)
chr4 (351-413)||(5717148-5717210)
chr4 (351-413)||(18983687-18983749)
chr4 (359-432)||(9856887-9856960)
chr4 (41-102)||(41561791-41561852)
chr4 (365-413)||(10631083-10631131)
chr4 (365-413)||(10821713-10821761)
chr4 (365-413)||(18241924-18241972)
chr4 (365-413)||(20617878-20617926)
[»] chr1 (32 HSPs)
chr1 (428-543)||(8648626-8648741)
chr1 (353-488)||(30819335-30819470)
chr1 (351-511)||(39286857-39287016)
chr1 (351-474)||(20411894-20412017)
chr1 (428-536)||(20412020-20412128)
chr1 (351-534)||(43998149-43998317)
chr1 (351-490)||(25405274-25405413)
chr1 (351-474)||(16431203-16431327)
chr1 (351-474)||(17716387-17716511)
chr1 (351-490)||(16382344-16382483)
chr1 (351-474)||(8648500-8648623)
chr1 (351-447)||(26191894-26191990)
chr1 (351-474)||(44537899-44538023)
chr1 (351-474)||(48255947-48256071)
chr1 (359-474)||(52236180-52236296)
chr1 (351-452)||(16385240-16385341)
chr1 (436-543)||(44538034-44538141)
chr1 (359-462)||(26134845-26134949)
chr1 (351-450)||(20861115-20861214)
chr1 (436-503)||(17716522-17716589)
chr1 (436-503)||(52236102-52236169)
chr1 (436-502)||(26134756-26134822)
chr1 (436-503)||(16431338-16431405)
chr1 (351-414)||(28764218-28764281)
chr1 (436-497)||(48256082-48256143)
chr1 (353-413)||(13799802-13799862)
chr1 (351-426)||(23298512-23298587)
chr1 (359-467)||(41801962-41802069)
chr1 (359-413)||(8953822-8953876)
chr1 (351-412)||(16148802-16148863)
chr1 (359-432)||(17986261-17986334)
chr1 (365-413)||(38045042-38045090)
[»] chr2 (42 HSPs)
chr2 (351-477)||(23140287-23140413)
chr2 (351-477)||(23552077-23552203)
chr2 (351-474)||(29568801-29568924)
chr2 (351-475)||(44997870-44997994)
chr2 (355-488)||(25337421-25337554)
chr2 (351-488)||(15583454-15583594)
chr2 (351-461)||(25858969-25859079)
chr2 (351-474)||(16134500-16134624)
chr2 (436-543)||(25481170-25481277)
chr2 (436-543)||(25488776-25488883)
chr2 (351-474)||(32441712-32441836)
chr2 (351-465)||(24506968-24507083)
chr2 (427-504)||(44997995-44998072)
chr2 (351-474)||(11390811-11390935)
chr2 (351-474)||(11407472-11407596)
chr2 (436-519)||(24507103-24507185)
chr2 (351-440)||(20281688-20281777)
chr2 (428-536)||(23140179-23140287)
chr2 (428-536)||(23551969-23552077)
chr2 (427-488)||(29568738-29568799)
chr2 (359-474)||(19927060-19927176)
chr2 (352-450)||(24321479-24321577)
chr2 (436-543)||(16134382-16134489)
chr2 (351-443)||(41653930-41654022)
chr2 (351-450)||(21344800-21344899)
chr2 (351-466)||(24371794-24371909)
chr2 (351-450)||(21753-21852)
chr2 (436-503)||(20281822-20281889)
chr2 (440-503)||(32441634-32441697)
chr2 (351-413)||(23257415-23257477)
chr2 (351-411)||(20851896-20851956)
chr2 (436-502)||(19927187-19927253)
chr2 (351-412)||(25481078-25481139)
chr2 (351-412)||(25488684-25488745)
chr2 (351-413)||(19124663-19124726)
chr2 (484-535)||(25858856-25858907)
chr2 (359-414)||(28496996-28497051)
chr2 (359-413)||(25043459-25043513)
chr2 (358-413)||(15027021-15027077)
chr2 (365-413)||(21468752-21468800)
chr2 (365-413)||(24825302-24825350)
chr2 (359-467)||(30949537-30949645)
[»] chr8 (21 HSPs)
chr8 (351-477)||(24966920-24967046)
chr8 (351-492)||(21319123-21319264)
chr8 (351-488)||(24341740-24341877)
chr8 (439-528)||(9973-10062)
chr8 (351-503)||(10035-10184)
chr8 (434-543)||(14351828-14351937)
chr8 (351-474)||(18161657-18161781)
chr8 (436-543)||(18161792-18161898)
chr8 (350-450)||(18007782-18007882)
chr8 (428-543)||(24967046-24967161)
chr8 (359-477)||(14351943-14352060)
chr8 (358-465)||(24221906-24222013)
chr8 (351-414)||(21139339-21139402)
chr8 (351-413)||(14162499-14162561)
chr8 (351-464)||(19792532-19792645)
chr8 (352-414)||(23222347-23222409)
chr8 (359-432)||(23455265-23455338)
chr8 (359-414)||(26012672-26012727)
chr8 (358-413)||(31470169-31470224)
chr8 (359-413)||(20263092-20263146)
chr8 (356-388)||(26853822-26853854)
[»] scaffold0012 (2 HSPs)
scaffold0012 (351-474)||(49524-49650)
scaffold0012 (436-543)||(49661-49768)
[»] scaffold0092 (2 HSPs)
scaffold0092 (351-466)||(19849-19964)
scaffold0092 (428-511)||(19755-19838)
[»] scaffold0471 (2 HSPs)
scaffold0471 (351-465)||(10126-10241)
scaffold0471 (436-543)||(10000-10107)
[»] scaffold0168 (2 HSPs)
scaffold0168 (428-535)||(9074-9181)
scaffold0168 (351-468)||(9190-9307)
[»] scaffold0360 (1 HSPs)
scaffold0360 (348-465)||(41-159)
[»] scaffold0064 (2 HSPs)
scaffold0064 (351-464)||(48447-48561)
scaffold0064 (436-541)||(48582-48687)
[»] scaffold0334 (1 HSPs)
scaffold0334 (359-492)||(6901-7034)
[»] scaffold0057 (2 HSPs)
scaffold0057 (351-474)||(20816-20940)
scaffold0057 (436-503)||(20951-21018)
[»] scaffold1559 (1 HSPs)
scaffold1559 (351-465)||(1077-1191)
[»] scaffold0916 (2 HSPs)
scaffold0916 (351-474)||(3147-3271)
scaffold0916 (436-503)||(3282-3349)
[»] scaffold0213 (3 HSPs)
scaffold0213 (359-474)||(26640-26756)
scaffold0213 (376-473)||(21360-21456)
scaffold0213 (351-383)||(21033-21065)
[»] scaffold0197 (2 HSPs)
scaffold0197 (351-474)||(9187-9312)
scaffold0197 (436-503)||(9109-9176)
[»] scaffold0371 (2 HSPs)
scaffold0371 (351-474)||(9399-9523)
scaffold0371 (436-543)||(9281-9388)
[»] scaffold0251 (2 HSPs)
scaffold0251 (351-474)||(19252-19376)
scaffold0251 (436-543)||(19134-19241)
[»] scaffold0001 (2 HSPs)
scaffold0001 (351-465)||(520422-520536)
scaffold0001 (351-413)||(83002-83064)
[»] scaffold0074 (1 HSPs)
scaffold0074 (351-464)||(23091-23204)
[»] scaffold0031 (4 HSPs)
scaffold0031 (359-474)||(22929-23045)
scaffold0031 (359-474)||(100034-100150)
scaffold0031 (436-504)||(100161-100229)
scaffold0031 (438-497)||(23058-23117)
[»] scaffold0096 (3 HSPs)
scaffold0096 (351-465)||(38291-38406)
scaffold0096 (436-497)||(38210-38271)
scaffold0096 (461-543)||(38142-38224)
[»] scaffold0058 (2 HSPs)
scaffold0058 (360-474)||(61515-61630)
scaffold0058 (454-543)||(61654-61743)
[»] scaffold0447 (4 HSPs)
scaffold0447 (359-444)||(6105-6190)
scaffold0447 (359-444)||(10719-10804)
scaffold0447 (436-502)||(6210-6276)
scaffold0447 (436-502)||(10824-10890)
[»] scaffold0383 (2 HSPs)
scaffold0383 (359-444)||(8714-8799)
scaffold0383 (436-502)||(8819-8885)
[»] scaffold0123 (1 HSPs)
scaffold0123 (351-426)||(13830-13905)
[»] scaffold0006 (1 HSPs)
scaffold0006 (351-420)||(28781-28850)
[»] scaffold0014 (1 HSPs)
scaffold0014 (351-465)||(167793-167907)
[»] scaffold0011 (1 HSPs)
scaffold0011 (351-466)||(172410-172525)
[»] scaffold0362 (1 HSPs)
scaffold0362 (351-413)||(9450-9512)
[»] scaffold0084 (1 HSPs)
scaffold0084 (351-413)||(31336-31398)
[»] scaffold0231 (1 HSPs)
scaffold0231 (351-412)||(20994-21055)
[»] scaffold0347 (1 HSPs)
scaffold0347 (365-413)||(2414-2462)
[»] scaffold0113 (1 HSPs)
scaffold0113 (365-413)||(46915-46963)
[»] scaffold0071 (1 HSPs)
scaffold0071 (365-413)||(32597-32645)
[»] scaffold0035 (1 HSPs)
scaffold0035 (358-413)||(32393-32449)


Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-125; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 239 - 543
Target Start/End: Original strand, 26138244 - 26138548
Alignment:
Q  239 aattactatgatgtatatgtggctttttcatggtggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggnnnnnnnaacaggggaca 338  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||       || ||||||      
T  26138244 aattactatgatgtatatgtggctttttcatgggtgcctcaaagttgcataagggagtaaagttagagggttggaaagtgggtttttttaataggggatc 26138343  T
Q  339 aaaatcgtaactattgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaa 438  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  26138344 aaaatcgcaactattgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaa 26138443  T
Q  439 aaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctgcct 538  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |    
T  26138444 aaatatgaagatctgatacaaaaatatcttgtgcaaataatttgaagatcttgtgcaaaaatataacaagtggcgggccccttttacccttttgctgctt 26138543  T
Q  539 ttgct 543  Q
    |||||    
T  26138544 ttgct 26138548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 243 - 541
Target Start/End: Original strand, 26017493 - 26017792
Alignment:
Q  243 actatgatgtatatgtggctttttcatggtggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggnnnnnnnaacaggggacaaaaa 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||  ||||    
T  26017493 actatgatgtatatgtggctttttcatgggggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggtttttttaataggggatcaaaa 26017592  T
Q  343 tcgtaactattgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa-gaagaattagagctaattcgtgccaaaaa 441  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||||||||||||||||||    
T  26017593 tcgcaattattgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaa 26017692  T
Q  442 tatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctgcctttg 541  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  26017693 tatgaagatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgctgcttttg 26017792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 243 - 541
Target Start/End: Original strand, 26156866 - 26157165
Alignment:
Q  243 actatgatgtatatgtggctttttcatggtggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggnnnnnnnaacaggggacaaaaa 342  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||  ||||    
T  26156866 actatgatgtatatgtggctttttcatgggggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggtttttttaataggggatcaaaa 26156965  T
Q  343 tcgtaactattgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa-gaagaattagagctaattcgtgccaaaaa 441  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||||||||||||||||||    
T  26156966 tcgcaattattgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaa 26157065  T
Q  442 tatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctgcctttg 541  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  26157066 tatgaagatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgctgcttttg 26157165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 26138037 - 26138218
Alignment:
Q  16 tcttcttctagcatcatagcaatggaaatcggaattgattattggataacggttaaacggttcgaagaacggttatggaaaattgaacggtaatagagta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26138037 tcttcttctagcatcatagcaatggaaatcggaattgattattggataacggtgaaacggttcgaagaacggttatggaaaattgaacggtaatagagta 26138136  T
Q  116 atagagagaacatggttatgcagcactcaagtgagggggtctcaaagttacccatggttatggagaattgtatggatcgaac 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  26138137 atagagagaacatggttatgcagcactcaagtgagggggtctcaaagttacctatggttatggagaattgtacggatcgaac 26138218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 26017264 - 26017448
Alignment:
Q  13 tcatcttcttctagcatcatagcaatggaaatcggaattgattattggataacggttaaacggttcgaagaacggttatggaaaattgaacggtaataga 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  26017264 tcatcttcttctagcatcatagcaatggaaatcggaattgattatttgataacggtgaaacggtttgaagaacggttatggaaaattgaacggtaataga 26017363  T
Q  113 gtaatagagagaacatggttatgcagcactcaagtgagggggtctcaaagttacccatggttatggagaattgtatggatcgaac 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26017364 gtaatagagagaacatggttatgcagcactcaagtgagggggtctcaaagttacccatggttatggagaattgtacggatcgaac 26017448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 26156637 - 26156821
Alignment:
Q  13 tcatcttcttctagcatcatagcaatggaaatcggaattgattattggataacggttaaacggttcgaagaacggttatggaaaattgaacggtaataga 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  26156637 tcatcttcttctagcatcatagcaatggaaatcggaattgattatttgataacggtgaaacggtttgaagaacggttatggaaaattgaacggtaataga 26156736  T
Q  113 gtaatagagagaacatggttatgcagcactcaagtgagggggtctcaaagttacccatggttatggagaattgtatggatcgaac 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26156737 gtaatagagagaacatggttatgcagcactcaagtgagggggtctcaaagttacccatggttatggagaattgtacggatcgaac 26156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 353 - 543
Target Start/End: Original strand, 25507288 - 25507478
Alignment:
Q  353 tgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatct 452  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||| |    
T  25507288 tgcaagttattttattttaggaaaaaatatttgaaagatggagtcttggagaaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatat 25507387  T
Q  453 gatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctgcctttgct 543  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| ||||||    
T  25507388 catagaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcacgcctcttttacccttttgctgcatttgct 25507478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 18234226 - 18234089
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||| ||||| |||| ||||||||||| ||||||    
T  18234226 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaggaaaagagaattggagctgattcatgccaaaaatacgaagat 18234127  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || |||||||||||| ||||||||||||||||||||||    
T  18234126 ctcatacaaaaatatcttgtgcaaagaatttgaagatc 18234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 29253628 - 29253754
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||| |||||||||||||||||||||||    
T  29253628 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagat 29253727  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    ||  ||||||||||||| |||||||||    
T  29253728 ctcgtacaaaaatatatggtgcaaaga 29253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 351 - 503
Target Start/End: Complemental strand, 23517738 - 23517585
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaa-gatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaaga 449  Q
    ||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||||| | |||| ||||| |||| || ||||||||||||||    
T  23517738 attgcaagttattttatttcaggaacaaatatttgaaaagattgagtcttggagcaaaagaaaggataattggagctgattcatgtcaaaaatatgaaga 23517639  T
Q  450 tctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    ||| |||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  23517638 tcttatacaaaaatattttgtgcaaagaatttgaagatcttgtaccaaaatata 23517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 351 - 503
Target Start/End: Complemental strand, 23575063 - 23574910
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaa-gatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaaga 449  Q
    ||||||| ||||||||||| |||||||||||||||||| |||  |||||||||||| ||||||| |||||| ||||| |||| |||||||||||||||||    
T  23575063 attgcaaattattttatttcaggaacaaatatttgaaaagattgagtcttggagcagaagaaaggagaattggagctgattcatgccaaaaatatgaaga 23574964  T
Q  450 tctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    ||| |||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  23574963 tcttatacaaaaatatcttgtgcaaagaatttgaagatcttgtaccaaaatata 23574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 351 - 492
Target Start/End: Original strand, 17739315 - 17739456
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| |||||||||||||||||||  || |||  |||||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||    
T  17739315 attgcaagttattatattttaggaacaaatattcaaaggatttagtcttggagcaaaagaaaggagaattggagttaattcatgccaaaaatatgaagat 17739414  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    || |||||||||||| |||||||||||| |||||||||||||    
T  17739415 ctcatacaaaaatatcttgtgcaaagaaattgaagatcttgt 17739456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 5950084 - 5949958
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||| |||| |||||||||||| |||||    
T  5950084 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagat 5949985  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||| ||||||||||||||    
T  5949984 ctcatgcaaaaaaatattgtgcaaaga 5949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 12660870 - 12660733
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||| || ||||| ||| ||||||||||||| |||||    
T  12660870 attgcaagttattttatttcaggaacaaatatttgaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagat 12660771  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || ||| |||||||| ||| ||||||||||||||||||    
T  12660770 cttatataaaaatatcttgggcaaagaatttgaagatc 12660733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 13217707 - 13217570
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||| ||||||  |||||||||||||||||||| ||| ||| |||| ||| |||||||||||||||||||    
T  13217707 attgcaagttatttaatttcaggaacaaatatttcaaagatttagtcttggagcaaaagaaaggagatttacagctgatttgtgccaaaaatatgaagat 13217608  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || |||||||||||| ||||| ||| | ||||||||||    
T  13217607 cttatacaaaaatatcttgtgtaaaaagtttgaagatc 13217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 5398871 - 5398995
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtc-ttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaaga 449  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||| |   ||| |||| |||||||||||||||||    
T  5398871 attgcaagttattttattttatgaacaaatatttgaaagatggagtctttggagcaaaagaaaggagaaatgttgcttattcatgccaaaaatatgaaga 5398970  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| ||||||||    
T  5398971 tctcatacaaaaatatcttgtgcaa 5398995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 428 - 543
Target Start/End: Original strand, 5398998 - 5399112
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| |||||||||||||||||||| || ||||||||| ||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||| |||    
T  5398998 attcatgccaaaaatatgaagatctcatgcaaaaatatcttgtgcaaataatttgaagatcttgtacaaaaatataacaagt-gggtgccccttttgccc 5399096  T
Q  528 ttttgctgcctttgct 543  Q
    ||||||||| ||||||    
T  5399097 ttttgctgcttttgct 5399112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 543
Target Start/End: Complemental strand, 17284450 - 17284256
Alignment:
Q  351 attgcaagttattttattttaggaacaaa-tatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa-g 448  Q
    ||||||||||||| ||||| ||||||||| ||||  ||||||  |||||| ||||||||||||  |||||| ||||| |||||||| |||||||| || |    
T  17284450 attgcaagttattatatttcaggaacaaaatattctaaagattgagtcttagagcaaaagaaatgagaattggagctgattcgtgcaaaaaatataaaag 17284351  T
Q  449 atctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgctgcctttgct 543  Q
    |||| |||||||||||| | |||||||||||||||||||||||| ||  ||||| | |||||| ||||||| || |||||||||||||| ||||||    
T  17284350 atcttatacaaaaatatctggtgcaaagaatttgaagatcttgtacattaatatca-aagtggcgcgccccattatacccttttgctgcttttgct 17284256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 12658378 - 12658264
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||| || ||||| ||| ||||||||||||| |||||    
T  12658378 attgcaagttattttatttcaggaacaaatatttgaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagat 12658279  T
Q  451 ctgatacaaaaatat 465  Q
    || ||| ||||||||    
T  12658278 cttatataaaaatat 12658264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 18400040 - 18399903
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||| |||||||||||||| | ||| ||||||||||||| |  |||||||||| ||||||||| | |||||||||| ||||  |||||||||||||||||    
T  18400040 attgtaagttattttatttcaagaataaatatttgaaagtttgagtcttggagaaaaagaaaggataattagagctgattccggccaaaaatatgaagat 18399941  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || |||||||||||| |||||||||||| ||| |||||    
T  18399940 ctaatacaaaaatatcttgtgcaaagaaattgtagatc 18399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 25963560 - 25963684
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||| ||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  25963560 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 25963659  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  25963660 tcttatacaaaaatatctagtgcaa 25963684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 25968207 - 25968331
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||| ||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  25968207 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 25968306  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  25968307 tcttatacaaaaatatctagtgcaa 25968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 32542903 - 32543019
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||| | ||    
T  32542903 ttattatatttcaggaacaaatattctaaagatttagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttacac 32543002  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  32543003 aaaaatatctggtgcaa 32543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 19613183 - 19613084
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||| | |||||||||||| |||||| | |||||||||||||||||||  || || ||||| |||||| ||||||||||||||||    
T  19613183 attgcaagttattttatttcatgaacaaatatttcaaagattacgtcttggagcaaaagaaagctgatttggagctgattcgtaccaaaaatatgaagat 19613084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 20463968 - 20464067
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | |||||||||||| ||||||  |||||||||||||||||||| ||| || ||||| ||||| |||||||||||||||||    
T  20463968 attgcaagttatttaatttcaagaacaaatatttcaaagattgagtcttggagcaaaagaaaggagatttggagctgattcgggccaaaaatatgaagat 20464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 17794346 - 17794232
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||| ||| || ||||||||| | || |||||||  |||||    
T  17794346 attgcaagttatttaatttcaggaacaaatatttgaaagatttagtcttggagcaaaagaaaggagatttggagctaatttgggctaaaaatacaaagat 17794247  T
Q  451 ctgatacaaaaatat 465  Q
     || | |||||||||    
T  17794246 ttggtgcaaaaatat 17794232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 25948960 - 25949084
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    |||| |||||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||| |||||| ||| | |||||||||||||||||  ||||    
T  25948960 attgtaagttattatatttcatgaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaaga 25949059  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  25949060 tcttatacaaaaatatctagtgcaa 25949084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 428 - 519
Target Start/End: Complemental strand, 5949958 - 5949867
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaa-atatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc 519  Q
    |||| |||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||||| ||| ||||||| |||||| |||||||    
T  5949958 attcatgccaaaaatatgaagatctcataccaaatatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 5949867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 15471550 - 15471451
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| ||||||||||| || ||||||  ||||| |||||||||||||| ||| || ||| | ||||| |||||||||||||||||    
T  15471550 attgcaagttatttaatttcaggaacaaatagttcaaagattgagtctcggagcaaaagaaaggagatttggagttgattcgggccaaaaatatgaagat 15471451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 534
Target Start/End: Original strand, 29253762 - 29253860
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcc-ccttttacccttttgct 534  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||| ||||| | |||||| ||||| | ||||||| |||||||    
T  29253762 caaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatatga-aagtggcgcgccacattttacctttttgct 29253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 25949095 - 25949203
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccc--cttttacccttttgc 533  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||| ||||| || ||||||  |||| | ||||||||    
T  25949095 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttaatccttttgc 25949193  T
Q  534 tgcctttgct 543  Q
    ||| ||||||    
T  25949194 tgcttttgct 25949203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 18973307 - 18973406
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||| ||||| |||| ||||||||||||| |||||||   |||||||||||||||||||  || || ||||| ||| | |||||||||||||||||    
T  18973307 attgcaagatatttaatttcaggaacaaatattcgaaagattgcgtcttggagcaaaagaaaggtgatttcgagctgatttgggccaaaaatatgaagat 18973406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 25963695 - 25963762
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||| |||| |||| |||||    
T  25963695 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatata 25963762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 25968342 - 25968409
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||| |||| |||| |||||    
T  25968342 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatata 25968409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 32543030 - 32543097
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  32543030 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 32543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 25339622 - 25339560
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  25339622 attgcaagttatttaattttaggaacaaatattctaaagattaagtcttgaagcaaaagaaag 25339560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 3923346 - 3923459
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||  ||||||  |||||||||||||||||||  ||| || ||||| |||||  | ||||||| ||||||    
T  3923346 attgcaagttatttaatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaatgagatttggagctgattcgaactaaaaatacgaagat 3923445  T
Q  451 ctgatacaaaaata 464  Q
     || | ||||||||    
T  3923446 ttggtgcaaaaata 3923459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 15161856 - 15161955
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||||||||||||||| || ||||||  ||||||||| |||||||| | ||| || ||| | ||||  || ||||||||||||||    
T  15161856 attgcaagttatttaattttaggaacaaatagttcaaagattgagtcttggaacaaaagaacggagatttggagttgattcaggctaaaaatatgaagat 15161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 15171863 - 15171962
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| ||||  |||||||||| || ||||||  ||||| |||||||||||||  ||| || ||| | ||||| |||||||||||||||||    
T  15171863 attgcaagttatttaatttcgggaacaaatagttcaaagattgagtctcggagcaaaagaaatgagatttggagttgattcgggccaaaaatatgaagat 15171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 23348588 - 23348527
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    |||||||||||||| |||| |||||||||||||| ||| ||  |||||||||||||||||||    
T  23348588 attgcaagttatttaatttcaggaacaaatatttcaaaaattgagtcttggagcaaaagaaa 23348527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 26821551 - 26821612
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    |||||||||||||||||||||| ||||||||||| ||||||   || |||||||||||||||    
T  26821551 attgcaagttattttattttagaaacaaatattttaaagattgtgttttggagcaaaagaaa 26821612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 467
Target Start/End: Original strand, 18627103 - 18627218
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| ||||| |||||||  ||||||  | ||||||||||||||||||  || || ||||||||||| ||  |||||| ||||||    
T  18627103 attgcaagttatttaatttcaggaataaatattctaaagattgaatcttggagcaaaagaaag-ggatttggagctaattcgggctgaaaatacgaagat 18627201  T
Q  451 ctgatacaaaaatatat 467  Q
       ||||||||||||||    
T  18627202 taaatacaaaaatatat 18627218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 465
Target Start/End: Original strand, 20222599 - 20222698
Alignment:
Q  366 attttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatacaaaaatat 465  Q
    |||| |||||||||||| ||||||||  |||||| ||| ||||||||||||| || ||||| |||   || ||||||||||||||||  | |||||||||    
T  20222599 atttaaggaacaaatatatgaaagatttagtcttcgagtaaaagaaagaagatttggagctgattgaggcaaaaaatatgaagatcttgtgcaaaaatat 20222698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 465
Target Start/End: Original strand, 22116583 - 22116682
Alignment:
Q  366 attttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatacaaaaatat 465  Q
    |||| |||||||||||| ||||||||  |||||| ||| ||||||||||||| || ||||| |||   || ||||||||||||||||  | |||||||||    
T  22116583 atttaaggaacaaatatatgaaagatttagtcttcgagtaaaagaaagaagatttggagctgattgaggcaaaaaatatgaagatcttgtgcaaaaatat 22116682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 29093234 - 29093297
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    |||||||||||||| |||| |||||| |||| |||||| ||  |||||||||||||||||||||    
T  29093234 attgcaagttatttaatttcaggaacgaataattgaaaaattgagtcttggagcaaaagaaaga 29093297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 29360006 - 29360061
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||| ||||| | |||||||||||||| |||| ||||||||||||||||||||||    
T  29360006 ttattatatttcaagaacaaatatttgatagattaagtcttggagcaaaagaaaga 29360061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 24393324 - 24393263
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    |||||||| ||||| |||| ||||||||||||| |||||||   ||||||||||||||||||    
T  24393324 attgcaagatatttaatttcaggaacaaatattcgaaagatagcgtcttggagcaaaagaaa 24393263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 6794647 - 6794702
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||| ||||||| |||| ||||||||| ||||  |||||||||||||||||||||    
T  6794647 ttattatattttatgaacgaatatttgatagattgagtcttggagcaaaagaaaga 6794702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 19993270 - 19993333
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    |||| ||||||||  |||| |||||||||||||  ||||||  |||||||||||||||||||||    
T  19993270 attgtaagttattcaatttcaggaacaaatattctaaagattcagtcttggagcaaaagaaaga 19993333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 30244943 - 30244998
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||| ||||| |||||| ||||||||| ||||  |||||||||||||||||||||    
T  30244943 ttattatatttcaggaacgaatatttgatagattgagtcttggagcaaaagaaaga 30244998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 19564270 - 19564216
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| ||||| |||||  |||||||||| ||| |||||||||||||||||||||    
T  19564270 ttattatatttcaggaatgaatatttgaaggattaagtcttggagcaaaagaaag 19564216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 447
Target Start/End: Original strand, 20222182 - 20222256
Alignment:
Q  373 gaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa 447  Q
    |||||||||| ||||||||  |||||||||||||||||||  ||| || ||||| |||   ||||||||||||||    
T  20222182 gaacaaatatatgaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaaatatgaa 20222256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 447
Target Start/End: Original strand, 22116166 - 22116240
Alignment:
Q  373 gaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa 447  Q
    |||||||||| ||||||||  |||||||||||||||||||  ||| || ||||| |||   ||||||||||||||    
T  22116166 gaacaaatatatgaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaaatatgaa 22116240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 25031622 - 25031508
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||| ||||||||| |||| ||||| |||||||| ||||||  ||||||| |||||||||||  ||| || ||||| ||||   | ||||||| ||||||    
T  25031622 attggaagttatttaatttcaggaataaatattttaaagattgagtcttgcagcaaaagaaatgagatttggagctgattcagactaaaaatacgaagat 25031523  T
Q  451 ctgatacaaaaatat 465  Q
     || | |||||||||    
T  25031522 ttggtgcaaaaatat 25031508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 25631162 - 25631108
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| ||||| |||||| |||||||||  ||| |||||||||||||||||||||    
T  25631162 ttattatatttcaggaacgaatatttgatggattaagtcttggagcaaaagaaag 25631108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 25923801 - 25923739
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| | |||||||||||  ||||||  |||||| |||||||||||||    
T  25923801 attgcaagttatttaatttcaagaacaaatattctaaagattgagtcttagagcaaaagaaag 25923739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Complemental strand, 24546021 - 24545964
Alignment:
Q  356 aagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||||| |||| | |||||||||||  ||||||  ||||||||||||||||||||    
T  24546021 aagttatttaatttaaagaacaaatattctaaagattgagtcttggagcaaaagaaag 24545964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 1122829 - 1122877
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  1122829 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 1122877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 23603688 - 23603640
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  23603688 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 23603640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 351 - 530
Target Start/End: Complemental strand, 44681 - 44502
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||||||| ||| |||||    
T  44681 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaattataaagat 44582  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttt 530  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44581 ctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 44502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 351 - 534
Target Start/End: Original strand, 22038571 - 22038754
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||  ||| ||||||||||||||| ||    
T  22038571 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttgttcatgccaaaaatatgaa-at 22038669  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    || |||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||  ||||||| | |||||||||||||    
T  22038670 ctcatacaaaaatatcttgtgcaaagaatttggagatcttgtacaaaaatataacaagtgacgcgccccatattacccttttgct 22038754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 34054016 - 34053879
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||  |||||| ||||| |||| ||||||||||||||||||    
T  34054016 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagaaaaggaaatgagaattggagctgattcatgccaaaaatatgaagat 34053917  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || |||||||||||| ||||||||||||||||||||||    
T  34053916 ctcatacaaaaatatcttgtgcaaagaatttgaagatc 34053879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 25766144 - 25766018
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||| |||| |||||||||||| |||||    
T  25766144 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagat 25766045  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||||||||||||||||||    
T  25766044 ctcatgcaaaaatatattgtgcaaaga 25766018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 19567450 - 19567325
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| ||||||||| || |||||    
T  19567450 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaa-ataaagat 19567352  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||||||||||||||||||    
T  19567351 ctcatgcaaaaatatattgtgcaaaga 19567325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 13601380 - 13601503
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||||||||||| |||||    
T  13601380 attgcaagttatcttattttaagaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagat 13601479  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || ||||||||||||||||||    
T  13601480 cttatgcaaaaatatattgtgcaa 13601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 454 - 532
Target Start/End: Original strand, 13601521 - 13601599
Alignment:
Q  454 atacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttg 532  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13601521 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttttg 13601599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 351 - 492
Target Start/End: Original strand, 17022929 - 17023070
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||| ||||| |||||||  ||||||  ||| || ||||||||||||  |||||| ||||| ||| |||||||||||| ||||||    
T  17022929 attgcaagttattatatttcaggaataaatattcaaaagattgagtattagagcaaaagaaatgagaattggagctgatttgtgccaaaaataagaagat 17023028  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    || | |||||||||| |||||||||||||| |||||||||||    
T  17023029 ctcacacaaaaatatcttgtgcaaagaattagaagatcttgt 17023070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 14661217 - 14661093
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  14661217 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 14661118  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  14661117 tcttatacaaaaatatctggtgcaa 14661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 492
Target Start/End: Complemental strand, 20225662 - 20225522
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||| ||||| ||||| |||||||||||||  ||||||  | || ||||||||||||||| |||||| ||||| |||| ||||||||||||||||||    
T  20225662 attgcaaattattatatttcaggaacaaatattcaaaagattga-tcgtggagcaaaagaaaggagaattggagctgattcttgccaaaaatatgaagat 20225564  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    || | |||||||||| ||||  |||||||| |||||||||||    
T  20225563 ctcacacaaaaatatcttgtataaagaattagaagatcttgt 20225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 25054678 - 25054787
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||| ||||    
T  25054678 ttattatattttaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatac 25054777  T
Q  458 aaaaatatat 467  Q
    ||||| ||||    
T  25054778 aaaaaaatat 25054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 359 - 474
Target Start/End: Complemental strand, 3250501 - 3250385
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||||| ||||    
T  3250501 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatac 3250402  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||||| ||||||    
T  3250401 aaaaatatatggtgcaa 3250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 14495114 - 14495007
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || ||||||||||||    
T  14495114 caaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcgcgccccattatacccttttgct 14495016  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  14495015 gcttttgct 14495007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 11398535 - 11398641
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| |||||||||||||||||||  | ||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||| ||||    
T  11398535 ttattatattttaggaacaaatattctatagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatac 11398634  T
Q  458 aaaaata 464  Q
    |||||||    
T  11398635 aaaaata 11398641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 14495249 - 14495125
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||  |||||| ||||| |||| ||||||||||||  ||||    
T  14495249 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaacgagaattggagctgattcatgccaaaaatataaaaga 14495150  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  14495149 tcttatacaaaaatatctggtgcaa 14495125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 543
Target Start/End: Complemental strand, 19567325 - 19567210
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcc-ccttttacc 526  Q
    |||| |||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| ||| ||||||| |||||| ||||| | || ||||    
T  19567325 attcatgccaaaaatattaagatctgataccaaaatatcttgtgcaaagaattcgaagatcttgtacaataatataa-aagtggtgcgcctcattatacc 19567227  T
Q  527 cttttgctgcctttgct 543  Q
    |||||||||| ||||||    
T  19567226 cttttgctgcttttgct 19567210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 447
Target Start/End: Original strand, 17050426 - 17050522
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa 447  Q
    |||||||||||||| |||| |||||||||||||  |||||| ||||||||||| |||||||||| || || ||||| ||||||||| ||||||||||    
T  17050426 attgcaagttatttaatttcaggaacaaatattctaaagattaagtcttggagaaaaagaaagaggatttggagctgattcgtgcctaaaatatgaa 17050522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 41546200 - 41546101
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||| ||| || ||||| ||||   |||||||||| |||||    
T  41546200 attgcaagttatttaatttcaggaacaaatatttgaaagatttagtcttggagcaaaagaaaggagattttgagctgattcagaccaaaaatataaagat 41546101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 463
Target Start/End: Complemental strand, 3245477 - 3245372
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||| ||||||||| |||||| ||||| |||||||||||||||||  ||||||| ||||    
T  3245477 ttattatatttcaggaacaaatattctaaagattgagtcttggagtaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatac 3245378  T
Q  458 aaaaat 463  Q
    ||||||    
T  3245377 aaaaat 3245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 8686304 - 8686207
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaag 448  Q
    ||||||||||||| ||||| |||||||||||||||||||||   ||| |||||||||||||||  || || ||||| ||||| |||||||||||||||    
T  8686304 attgcaagttattatatttcaggaacaaatatttgaaagattgtgtcctggagcaaaagaaaggtgatttggagctgattcgggccaaaaatatgaag 8686207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 14661082 - 14660975
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||| | ||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||||||||    
T  14661082 caaaaatatgaatatctcatacaaaaatatcatgtacgaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttgct 14660984  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  14660983 gcttttgct 14660975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 8531596 - 8531710
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||| || |||| |||||||||||||||||||||  ||| |||||||||||||||| ||| || |||   ||| | |||||||||| ||||||    
T  8531596 attgcaagttaattaatttcaggaacaaatatttgaaagattgagttttggagcaaaagaaaggagatttggaggcgatttgggccaaaaatacgaagat 8531695  T
Q  451 ctgatacaaaaatat 465  Q
     || |||||||||||    
T  8531696 ttggtacaaaaatat 8531710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 443
Target Start/End: Original strand, 17041407 - 17041499
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaata 443  Q
    |||||||||||||| |||| |||| ||||||||  ||||||  ||||||||||||||||||||| || || ||||| ||||||||| ||||||    
T  17041407 attgcaagttatttaatttcaggatcaaatattctaaagattgagtcttggagcaaaagaaagaggatttggagctgattcgtgcctaaaata 17041499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 465
Target Start/End: Complemental strand, 11870245 - 11870135
Alignment:
Q  352 ttgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatc 451  Q
    ||||||||||||||   | |||||||||||||| ||||||  |||||||||||||||||||| |||  | ||||| ||||| |||||||||| ||||||     
T  11870245 ttgcaagttatttt---tcaggaacaaatatttcaaagattgagtcttggagcaaaagaaaggagatctggagctgattcgggccaaaaatacgaagatt 11870149  T
Q  452 tgatacaaaaatat 465  Q
    || | |||||||||    
T  11870148 tggtgcaaaaatat 11870135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 25054807 - 25054874
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  25054807 caaaaatatgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 25054874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 36075967 - 36076034
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  36075967 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 36076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 437 - 503
Target Start/End: Original strand, 11398662 - 11398728
Alignment:
Q  437 aaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    ||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  11398662 aaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 11398728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 36075840 - 36075956
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  |||| |  |||||||||  ||||||||| |||||| ||||| |||||| ||||||||||  ||||||| ||||    
T  36075840 ttattatatttcaggaacaaatattctaaagtttgagtcttggaaaaaaagaaaggagaattggagctgattcgtaccaaaaatataaaagatcttatac 36075939  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  36075940 aaaaatatctagtgcaa 36075956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 16703457 - 16703556
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| ||||||||||||||  |||||  |||||||||| ||||||||| ||| || ||||| ||||| |  ||| ||||||||||    
T  16703457 attgcaagttatttaatttcaggaacaaatatttctaagattgagtcttggagtaaaagaaaggagatttggagctgattcggggtaaacatatgaagat 16703556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 40846472 - 40846535
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||||| ||||| ||||| |||||||||||||||| ||||  |||||||||||||||||||||    
T  40846472 attgcaatttattatatttcaggaacaaatatttgatagattgagtcttggagcaaaagaaaga 40846535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 436 - 502
Target Start/End: Complemental strand, 3245350 - 3245284
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    |||||||||||| |||| ||||||||||||  | ||||||||||||||||||||||| |||| ||||    
T  3245350 caaaaatatgaatatctcatacaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 42244961 - 42244899
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| |||||||||||||  ||||||  ||||||||||||||||||||    
T  42244961 attgcaagttatttaatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaag 42244899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 7908196 - 7908295
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||  ||||||  |||||| ||| |||||||||| || || ||||| |||| |||  |||||| ||||||    
T  7908196 attgcaagttatttaatttcaggaacaaatattctaaagattgagtcttcgagtaaaagaaagaggatttggagctgattcatgcttaaaatacgaagat 7908295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 414
Target Start/End: Complemental strand, 11827827 - 11827764
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    |||||||||||||| |||| |||||||||||||  ||||||   ||||||||||||||||||||    
T  11827827 attgcaagttatttaatttcaggaacaaatattctaaagattcggtcttggagcaaaagaaaga 11827764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 27406883 - 27406982
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||| | |||| || ||||||||||| ||||||  ||||||||||||||||||| | || || ||||| |||||| |  |||||| ||||||    
T  27406883 attgcaagttatataatttcagaaacaaatattttaaagattcagtcttggagcaaaagaaaaaggatttggagctgattcgtacttaaaatacgaagat 27406982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 27879922 - 27879977
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||| |||||||||||| ||||||||| ||||  |||||||||||||||||||||    
T  27879922 ttattatattttaggaacgaatatttgatagattgagtcttggagcaaaagaaaga 27879977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 27993236 - 27993181
Alignment:
Q  358 gttattttattttaggaacaaatat-ttgaaagatgaagtcttggagcaaaagaaa 412  Q
    ||||||| |||| |||||||||||| |||||||||  |||||||||||||||||||    
T  27993236 gttatttaatttcaggaacaaatatgttgaaagatttagtcttggagcaaaagaaa 27993181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 13298111 - 13298153
Alignment:
Q  371 aggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||||||||||||  ||| |||||||||||||||||||||    
T  13298111 aggaacaaatatttgatggattaagtcttggagcaaaagaaag 13298153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 3226550 - 3226598
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  3226550 tattttaggaacgaatatttgattgattgagtcttggagcaaaagaaag 3226598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 4829769 - 4829817
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  4829769 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 4829817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 13664802 - 13664850
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| ||||||||||||||||  |||  ||||||||||||||||||||    
T  13664802 tatttcaggaacaaatatttgatggattgagtcttggagcaaaagaaag 13664850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 13690933 - 13690981
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| ||||||||||||||||  |||  ||||||||||||||||||||    
T  13690933 tatttcaggaacaaatatttgatggattgagtcttggagcaaaagaaag 13690981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 14094629 - 14094677
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  14094629 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 14094677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 15429593 - 15429641
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  15429593 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 15429641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 6e-57; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 351 - 543
Target Start/End: Complemental strand, 6257915 - 6257723
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||| ||||||||||||||||||||||||||||||||| | ||||| ||||| |||||| ||| || ||||| |||| ||  ||||||||||||||    
T  6257915 attgcaagatattttattttaggaacaaatatttgaaagatggaatcttgcagcaatagaaaggagacttggagctgattcatgtaaaaaatatgaagat 6257816  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctgcctttgct 543  Q
    || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||||||| |||| ||||||    
T  6257815 ctaatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcaccccttttgcccttttcctgcttttgct 6257723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 1462209 - 1462332
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||||||| |||||||||    
T  1462209 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaagtatgaagat 1462308  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || |||||||||||| ||||||||    
T  1462309 ctcatacaaaaatatcttgtgcaa 1462332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 354 - 488
Target Start/End: Complemental strand, 4461146 - 4461012
Alignment:
Q  354 gcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctg 453  Q
    |||||||||||||||| |||||||||||||| ||||||   ||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||     
T  4461146 gcaagttattttatttcaggaacaaatatttcaaagattgcgtcttggagcaaaagaaaggagaattggagctgatccgtgccaaaaatatgaagatctt 4461047  T
Q  454 atacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    |||||||||||| ||||||||||||||||||||||    
T  4461046 atacaaaaatatcttgtgcaaagaatttgaagatc 4461012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 19515812 - 19515686
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||| ||||| |||||||||||||||||||||||    
T  19515812 attgcaagttattttattttagaaacaaatatttgaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagat 19515713  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || |||||||||||| | |||||||||    
T  19515712 ctcatacaaaaatatctggtgcaaaga 19515686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 21005911 - 21005787
Alignment:
Q  351 attgcaagttattttattttagg-aacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaaga 449  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  21005911 attgcaagttattttattttagggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaaga 21005812  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| ||||||||    
T  21005811 tctcatacaaaaatatcttgtgcaa 21005787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 48713113 - 48713236
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||| |||||||||||| |||||    
T  48713113 attgcaaattattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaagagaattagagcttattcatgccaaaaatataaagat 48713212  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || ||||||||||||||||||    
T  48713213 ctcatgcaaaaatatattgtgcaa 48713236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 428 - 533
Target Start/End: Complemental strand, 9194315 - 9194210
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  9194315 attcatgccaaaaatatgaagatctcatacaaaaatatcttgtgtaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttaccc 9194216  T
Q  528 ttttgc 533  Q
    ||||||    
T  9194215 ttttgc 9194210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 9194441 - 9194318
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||| |||| |||||||||||| |||||    
T  9194441 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagat 9194342  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
     | || |||||||||||| |||||    
T  9194341 ttcatgcaaaaatatattctgcaa 9194318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 428 - 536
Target Start/End: Original strand, 48713239 - 48713348
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaa-atatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacc 526  Q
    |||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||    
T  48713239 attcatgccaaaaatatgaagatctcatacaaaaaatatattgttcaaagaatttgaagatcttgtgcaaaaatataacaagtgccgcaccccttttacc 48713338  T
Q  527 cttttgctgc 536  Q
    ||||||||||    
T  48713339 cttttgctgc 48713348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 432 - 543
Target Start/End: Complemental strand, 9264706 - 9264595
Alignment:
Q  432 gtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccctttt 531  Q
    ||||||||||||||||||||| |  |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||    
T  9264706 gtgccaaaaatatgaagatctaaagcaaaaatatattgtgcgaagaatttgaatatcttgtgcaaaaatataacaagtggtgcaacccttttaccctttt 9264607  T
Q  532 gctgcctttgct 543  Q
    ||||| ||||||    
T  9264606 gctgcttttgct 9264595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 9004270 - 9004396
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||| |||||||| ||||| |||||||||||||||||||||  |||||||| |||||||||||||||||| ||||| |||| || ||||||||| |||||    
T  9004270 attgtaagttattatatttcaggaacaaatatttgaaagattgagtcttggggcaaaagaaagaagaattggagcttattcatggcaaaaatataaagat 9004369  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||||||||||||||||||    
T  9004370 ctcatgcaaaaatatattgtgcaaaga 9004396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 488
Target Start/End: Complemental strand, 11484267 - 11484131
Alignment:
Q  352 ttgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatc 451  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||| ||| || ||||| |||  |||||||| ||||||||||    
T  11484267 ttgcaagttattttattttaggaacaaatatttgaaagattgagtctcagagcaaaagaaaggagatttggagctgatttatgccaaaagtatgaagatc 11484168  T
Q  452 tgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    | |||||||| ||| ||||||||| | | ||||||||    
T  11484167 ttatacaaaagtatcttgtgcaaaaagtgtgaagatc 11484131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 16463658 - 16463534
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||    
T  16463658 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaaga 16463559  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  16463558 tcttatacaaaaatatctggtgcaa 16463534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 428 - 543
Target Start/End: Original strand, 9004396 - 9004511
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacc 526  Q
    |||| |||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||    
T  9004396 attcatgccaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacc 9004494  T
Q  527 cttttgctgcctttgct 543  Q
    |||||||||| ||||||    
T  9004495 cttttgctgcttttgct 9004511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 10204326 - 10204450
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||| | | |||||||||||||||  ||||    
T  10204326 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagatgaatcgtgccaaaaatataaaaga 10204425  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||||| ||||||    
T  10204426 tcttatacaaaaatatatggtgcaa 10204450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 48356022 - 48355898
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| | |||| ||||| |||||||||||||||||  ||||    
T  48356022 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatataaaaga 48355923  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  48355922 tcttatacaaaaatatctggtgcaa 48355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 534
Target Start/End: Original strand, 1462343 - 1462442
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    ||||||||||||||||  ||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||| ||||||| | |||||||||||||    
T  1462343 caaaaatatgaagatcccatacaaaaaaatcttgtgcaaagaattagaagatcttgtacaaaaatataacaagtggcgcgccccatattacccttttgct 1462442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 9192467 - 9192574
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||||  ||||||| ||||    
T  9192467 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaagaagaattggagctgattcgtgccaaaaatataaaagatcttatac 9192566  T
Q  458 aaaaatat 465  Q
    ||||||||    
T  9192567 aaaaatat 9192574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 17911265 - 17911379
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||  ||| || ||||| ||||| |||||||||| ||||||    
T  17911265 attgcaagttatttaatttcaggaacaaatatttgaaagattgagtcttggagcaaaagaaacgagatttggagctgattcgggccaaaaatacgaagat 17911364  T
Q  451 ctgatacaaaaatat 465  Q
     || | |||||||||    
T  17911365 ttggtgcaaaaatat 17911379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 8880438 - 8880345
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    ||||||||||||| |||||||||||||||||||  ||||||  |||||||||||||||||||  |||||| ||||| |||||||||||||||||    
T  8880438 attgcaagttattatattttaggaacaaatattctaaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtgccaaaaatat 8880345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 467
Target Start/End: Complemental strand, 14942161 - 14942045
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaa-atatgaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| ||||||||||||| |||  ||||    
T  14942161 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatata-aaaga 14942063  T
Q  450 tctgatacaaaaatatat 467  Q
    ||| ||||||||||||||    
T  14942062 tcttatacaaaaatatat 14942045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 467
Target Start/End: Complemental strand, 15369754 - 15369638
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaa-atatgaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| ||||||||||||| |||  ||||    
T  15369754 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatata-aaaga 15369656  T
Q  450 tctgatacaaaaatatat 467  Q
    ||| ||||||||||||||    
T  15369655 tcttatacaaaaatatat 15369638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 428 - 517
Target Start/End: Complemental strand, 21005784 - 21005695
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcc 517  Q
    |||| ||| |||| ||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  21005784 attcatgcaaaaattatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatctcgtacaaaaatataacaagtggcgcgcc 21005695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 13434527 - 13434643
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  ||||||||||||||||||||||||||| ||||  |||||||||||||||||  ||||||| ||||    
T  13434527 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaagaagaatttgagcggattcgtgccaaaaatataaaagatcttatac 13434626  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  13434627 aaaaatatctggtgcaa 13434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 14942027 - 14941920
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||||||||    
T  14942027 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttgct 14941929  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  14941928 gcttttgct 14941920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 15369620 - 15369513
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||||||||    
T  15369620 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttgct 15369522  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  15369521 gcttttgct 15369513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 9264836 - 9264717
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||||||||   ||||||  ||||||  |||||||||||||||||||| |||||| || || |||| ||||||||||||||||||    
T  9264836 attgcaagttattatattttaggattgaatattacaaagatttagtcttggagcaaaagaaaggagaattggaacttattcatgccaaaaatatgaagat 9264737  T
Q  451 ctgatacaaaaatatattgt 470  Q
    || || ||||| ||||||||    
T  9264736 ctcatgcaaaagtatattgt 9264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 4540884 - 4540998
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| ||||| |||||||||||||||  |||||||||||||||||||  ||| || ||||| |||||  ||||||||||||||||    
T  4540884 attgcaagttatttaatttcaggaataaatatttgaaagatttagtcttggagcaaaagaaaagagatttggagctgattcggaccaaaaatatgaagat 4540983  T
Q  451 ctgatacaaaaatat 465  Q
     || || ||||||||    
T  4540984 ttggtataaaaatat 4540998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 16897719 - 16897626
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    |||||||||||||| |||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||| | |||||||||||||||||    
T  16897719 attgcaagttatttaatttcaggaacaaatattcaaaagatttagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatat 16897626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 474
Target Start/End: Complemental strand, 649211 - 649095
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  |||||||  |||    
T  649211 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttgtac 649112  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  649111 aaaaatatctggtgcaa 649095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 4307513 - 4307629
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| | |||||||||||  ||||||  ||||||||| |||||||||| |||||||||||| |||||||||||||||||  ||||||| ||||    
T  4307513 ttattatatttcatgaacaaatattctaaagattgagtcttggaacaaaagaaaggagaattagagctgattcgtgccaaaaatataaaagatcttatac 4307612  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  4307613 aaaaatatctggtgcaa 4307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 4312883 - 4312999
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatg-aagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| | |||| ||||| |||||||||||||||||| ||||||| ||||    
T  4312883 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggaaaattggagctgattcgtgccaaaaatatgaaagatctcatac 4312982  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||| ||| | ||||||    
T  4312983 aaaattatctggtgcaa 4312999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 25181402 - 25181278
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  ||| |||||||||||||||  |||||| ||||| ||||||||||||| |||  ||||    
T  25181402 attgcaagttattatatttcaggaacaaatattctaaagattgagttttggagcaaaagaaatgagaattggagctgattcgtgccaaaactataaaaga 25181303  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  25181302 tcttatacaaaaatatctggtgcaa 25181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 437 - 543
Target Start/End: Original strand, 10204462 - 10204568
Alignment:
Q  437 aaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgctg 535  Q
    ||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||| |||||    
T  10204462 aaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttatgctg 10204560  T
Q  536 cctttgct 543  Q
    | ||||||    
T  10204561 cttttgct 10204568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 30064399 - 30064300
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| || ||||||||||| ||||||  |||||||||||||||||||| ||| || ||| | ||||| |||||||||||||||||    
T  30064399 attgcaagttatttaatttcagaaacaaatattttaaagattgagtcttggagcaaaagaaaggagattttgagttgattcgggccaaaaatatgaagat 30064300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 444
Target Start/End: Complemental strand, 15707665 - 15707580
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  15707665 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 15707580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 4313010 - 4313117
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||| ||||| || || |||| || ||||||||||||    
T  4313010 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgctccccattatacccttttgct 4313108  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  4313109 gcttttgct 4313117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 25181267 - 25181160
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccc-cttttacccttttgct 534  Q
    |||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||  || |||||||||| |    
T  25181267 caaaaatatgaatatctcatacaaaaatatcttgtgaaaagaatttgaagatcttgtacaataatataa-aagtggtgcgccctattatacccttttgtt 25181169  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  25181168 gcttttgct 25181160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 4983534 - 4983420
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||||||||||  |||||| ||| ||||||||| ||| || ||||| ||||| |  ||||||| ||||||    
T  4983534 attgcaagttatttaatttcaggaacaaatatttgaaagattgagtctttgagaaaaagaaaggagatttggagctgattcgggaaaaaaatacgaagat 4983435  T
Q  451 ctgatacaaaaatat 465  Q
     || | |||||||||    
T  4983434 ttggtgcaaaaatat 4983420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 504
Target Start/End: Complemental strand, 15707538 - 15707470
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataa 504  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| |||||||    
T  15707538 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa 15707470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 19515678 - 19515571
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgc-cccttttacccttttgct 534  Q
    ||||||||||||||||| |||| ||||||| || |||||||||||||||||||| || ||| ||||| | |||||| |||| || ||||||||||||| |    
T  19515678 caaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatctcgtacaataatatga-aagtggcgcgctccattttacccttttgtt 19515580  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  19515579 gcttttgct 19515571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 474
Target Start/End: Complemental strand, 33612693 - 33612577
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||  |||||| ||| | |||||||||||||||||  ||||||| ||||    
T  33612693 ttattatatttcaagaacaaatattctaaagattgagtcttggagcaaaagaaatgagaattggagttgattcgtgccaaaaatataaaagatcttatac 33612594  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  33612593 aaaaatatctggtgcaa 33612577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 4307640 - 4307707
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  4307640 caaaaatatgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 4307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 4467418 - 4467319
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | |||||||||||||||||||   ||||| ||||||||||||| ||| || ||||| ||| | |||||| ||||||||||    
T  4467418 attgcaagttatttaatttcaagaacaaatatttgaaagattgcgtctttgagcaaaagaaaggagatttggagctgatttgggccaaatatatgaagat 4467319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 519
Target Start/End: Original strand, 33609485 - 33609568
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc 519  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||  ||||| || |||||||    
T  33609485 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatacgacaagaggcgcgcccc 33609568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 474
Target Start/End: Original strand, 33609373 - 33609474
Alignment:
Q  374 aacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatacaaaaatatattgtgc 472  Q
    ||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||| ||||||||||||  ||||||| | |||||||||| | ||||    
T  33609373 aacaaatattcaaaagatttagtcttggagcaaaagaaaggagaatttgagctgattcatgccaaaaatataaaagatcttacacaaaaatatctggtgc 33609472  T
Q  473 aa 474  Q
    ||    
T  33609473 aa 33609474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 501
Target Start/End: Complemental strand, 16897583 - 16897519
Alignment:
Q  437 aaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaata 501  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||| ||| ||||    
T  16897583 aaaaatatgaatatctcatacaaaaatatattgtgcaaggaatttgaaaatcttgtacaataata 16897519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 8880254 - 8880187
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  |||||||| |||||||||||||||| |||| |||||    
T  8880254 caaaaatatgaatatctcatacaaaaatatcctgtgcaaaaaatttgaagatcttgtacaaacatata 8880187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 13434654 - 13434721
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||   |||||||||||||||||||||||| |||| |||||    
T  13434654 caaaaatatgaatatctcatacaaaaatattccgtgcaaagaatttgaagatcttgtacaaatatata 13434721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 474
Target Start/End: Original strand, 46274035 - 46274154
Alignment:
Q  356 aagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctga 454  Q
    ||||||||| |||| | |||||||||||  ||||||  |||||||||||||||||||| |||||| ||| | |||  ||||||||||||  ||||||| |    
T  46274035 aagttatttaatttcatgaacaaatattcaaaagatttagtcttggagcaaaagaaaggagaattggagttgatttctgccaaaaatataaaagatctta 46274134  T
Q  455 tacaaaaatatattgtgcaa 474  Q
     |||||||||| | ||||||    
T  46274135 cacaaaaatatctggtgcaa 46274154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 437 - 503
Target Start/End: Complemental strand, 35964539 - 35964473
Alignment:
Q  437 aaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    ||||||||||| |||| ||||||||||||  |||||||||||||| |||||||||| |||| |||||    
T  35964539 aaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttaaagatcttgtacaaatatata 35964473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 502
Target Start/End: Complemental strand, 649083 - 649018
Alignment:
Q  437 aaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    |||||| |||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  649083 aaaaatttgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaacatat 649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 4257025 - 4256928
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||  ||||  ||||||  |||||||||||||||||||| ||| || ||||| ||||||||  |||||| ||||||    
T  4257025 attgcaagttatttaatttcaggaaca--tattctaaagattgagtcttggagcaaaagaaaggagatttggagctgattcgtgctgaaaatacgaagat 4256928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 466
Target Start/End: Original strand, 15522671 - 15522779
Alignment:
Q  358 gttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatac 457  Q
    ||||||| |||| |||||||||||| ||||||||  ||||||||||||| |||||| |   |||||||| |||   || ||||||||||||||||  | |    
T  15522671 gttatttaatttcaggaacaaatatatgaaagattgagtcttggagcaagagaaaggaattttagagctgattgaggctaaaaatatgaagatcttgtgc 15522770  T
Q  458 aaaaatata 466  Q
    |||||||||    
T  15522771 aaaaatata 15522779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 35964632 - 35964560
Alignment:
Q  394 agtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatacaaaaatat 465  Q
    |||||||||||||||||||| |||| | ||||| ||| |||||||||||||  ||||||| ||||||||||||    
T  35964632 agtcttggagcaaaagaaaggagaactggagctgatttgtgccaaaaatataaaagatcttatacaaaaatat 35964560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 48355887 - 48355831
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    |||||||||||| |||| ||||||||||||  | ||||||| |||||||||||||||    
T  48355887 caaaaatatgaatatctcatacaaaaatattctatgcaaaggatttgaagatcttgt 48355831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 680374 - 680319
Alignment:
Q  358 gttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||| |||| | |||||||||| ||||||||  ||||||||||||||||||||    
T  680374 gttatttaatttcatgaacaaatatatgaaagattgagtcttggagcaaaagaaag 680319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 1611715 - 1611782
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcg 432  Q
    ||||| |||||| ||| ||||| ||||  ||||||||||||||||||||| || |||||||| |||||    
T  1611715 tatttcaggaacgaatgtttgatagattgagtcttggagcaaaagaaagaggatttagagctgattcg 1611782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 16463523 - 16463456
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| || |||||||||  | ||||||||||||||||||||| | |||| |||||    
T  16463523 caaaaatatgaatatctcatgcaaaaatatcctatgcaaagaatttgaagatcttctacaaatatata 16463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 502
Target Start/End: Complemental strand, 33612563 - 33612501
Alignment:
Q  439 aaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    ||||||||| |||| |||||||| |||  ||||||||||||||||||||||||| |||| ||||    
T  33612563 aaatatgaatatctcatacaaaa-tatcatgtgcaaagaatttgaagatcttgtacaaatatat 33612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 5825729 - 5825791
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||| ||||||||| |||| |||||||||||||  ||| ||  ||||||||||||||||||||    
T  5825729 attgtaagttatttaatttcaggaacaaatattctaaaaattgagtcttggagcaaaagaaag 5825791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 21063029 - 21062967
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| |||||||||||||  ||||||  |  |||||||||||||||||    
T  21063029 attgcaagttatttaatttcaggaacaaatattctaaagattgatacttggagcaaaagaaag 21062967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 23203491 - 23203539
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  23203491 tattttaggaacgaatatttgattgattgagtcttggagcaaaagaaag 23203539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 23509618 - 23509666
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  23509618 tattttaggaacgaatatttgattgattgagtcttggagcaaaagaaag 23509666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 23515400 - 23515448
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  23515400 tattttaggaacgaatatttgattgattgagtcttggagcaaaagaaag 23515448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 38877030 - 38877086
Alignment:
Q  358 gttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||||| |||| | ||| |||||| ||||||||  |||||||||||||||||||||    
T  38877030 gttatttaatttcaagaaaaaatatatgaaagattgagtcttggagcaaaagaaaga 38877086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 41113226 - 41113178
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  41113226 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 41113178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 351 - 535
Target Start/End: Complemental strand, 22809 - 22621
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| || ||||| |||| || |||||||||||||||    
T  22809 attgcaagttattttattttaggaacaaatatttgaaagatggagtctttgagcaaaagaaaggagatttggagctgattcatgtcaaaaatatgaagat 22710  T
Q  451 ct----gatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctg 535  Q
    ||     |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||  |||||| |||| |||||||||||    
T  22709 ctcatatatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaaaatataacaagtgacgcgcccattttgcccttttgctg 22621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 266 - 475
Target Start/End: Complemental strand, 7180 - 6950
Alignment:
Q  266 tcatggtggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggnnnnnnn-aacaggggacaaaaatcgtaactattgcaagttattt 364  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||        || ||||||| ||||||| ||||||||||||||||||    
T  7180 tcatgggggcctcaaagttgcataagggagtaaagttagagggttggaaagtgggttttttttaataggggaccaaaatcgcaactattgcaagttattt 7081  T
Q  365 tatttta--------------------ggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    |||||||                    ||||||||||||||||||||| |||||| ||||||||||||| |||||| |||||||||||||| ||||||||    
T  7080 tattttatgaacaaatatttgaaagatggaacaaatatttgaaagatggagtcttagagcaaaagaaaggagaattggagctaattcgtgcaaaaaatat 6981  T
Q  445 gaagatctgatacaaaaatatattgtgcaaa 475  Q
    ||||||||||||||||||||| |||||||||    
T  6980 gaagatctgatacaaaaatatcttgtgcaaa 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 6961 - 6924
Alignment:
Q  486 atcttgtgcaaaaatataacaagtggggcgcccctttt 523  Q
    |||||||||||||||||||||||||| |||||||||||    
T  6961 atcttgtgcaaaaatataacaagtggcgcgcccctttt 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 351 - 492
Target Start/End: Complemental strand, 2953938 - 2953797
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||| |||||||||||||  ||||||  ||||||||| |||||||||| |||||| ||||| |||||||||||||||||||||||    
T  2953938 attgcaagttattttatttcaggaacaaatattcaaaagatttagtcttggaacaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagat 2953839  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    || |||||||||||| |||||||||||| |||||||||||||    
T  2953838 ctcatacaaaaatatcttgtgcaaagaaattgaagatcttgt 2953797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 25486132 - 25486009
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||| |||| | |||||||||| |||||    
T  25486132 attgcaagttattttattttaggaacaaatatttgaaagatggagtctttgagcaaaagaaaggagaattggagcttattcataccaaaaatataaagat 25486033  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || ||||||||||||||||||    
T  25486032 ctcatgcaaaaatatattgtgcaa 25486009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 363 - 474
Target Start/End: Complemental strand, 20104366 - 20104255
Alignment:
Q  363 tttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatacaaaaa 462  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| |||| |||  |||||||||||||||||||| |||||||||    
T  20104366 tttattttaggaataaatatttgaaagatggagtcttggagcaaaagaaaggagaattatagcttattgatgccaaaaatatgaagatctcatacaaaaa 20104267  T
Q  463 tatattgtgcaa 474  Q
    ||| ||||||||    
T  20104266 tatcttgtgcaa 20104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 433 - 543
Target Start/End: Complemental strand, 20104247 - 20104136
Alignment:
Q  433 tgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttaccctttt 531  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||| | |||||||| |    
T  20104247 tgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttatacaaaaatataacaagtggcgcgccccatattacccttct 20104148  T
Q  532 gctgcctttgct 543  Q
    ||||| ||||||    
T  20104147 gctgcttttgct 20104136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 16676772 - 16676909
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| ||||  ||||||||||||||||||||  |||||||||||||||||||   || ||  |||| ||| |||||||||||||||||||    
T  16676772 attgcaagttatttaatttatggaacaaatatttgaaagattgagtcttggagcaaaagaaaagggatttgaagctgatttgtgccaaaaatatgaagat 16676871  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || |||||||||||| ||||||||| | ||||||||||    
T  16676872 cttatacaaaaatatcttgtgcaaaaagtttgaagatc 16676909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 20967405 - 20967529
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  20967405 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 20967504  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  20967505 tcttatacaaaaatatctggtgcaa 20967529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 23343975 - 23343851
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| || ||||||||||||||  ||||    
T  23343975 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgatgcgtgccaaaaatataaaaga 23343876  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    | | | |||||||||| ||||||||    
T  23343875 ttttacacaaaaatatcttgtgcaa 23343851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 20967540 - 20967647
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| || | |||||||||||| || ||||||||||||||||||||||| |||||| |||| |||||| ||||||| || ||||||||||||    
T  20967540 caaaaatatgaatatgttatacaaaaatatcttatgcaaagaatttgaagatcttgtacaaaaacataa-aagtggcgcgccccattatacccttttgct 20967638  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  20967639 gcttttgct 20967647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 535
Target Start/End: Complemental strand, 23343840 - 23343742
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctg 535  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||||  ||||| || |||||||||||||    
T  23343840 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcccattatacccttttgctg 23343742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 24143620 - 24143521
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| ||||||||||||||||||  ||||||  ||||||||||||||||||||| || || ||||| ||||||||  |||||| ||||||    
T  24143620 attgcaagttatttaattttaggaacaaatattctaaagattcagtcttggagcaaaagaaagaggatttggagctgattcgtgcgtaaaatacgaagat 24143521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 429 - 503
Target Start/End: Original strand, 20738115 - 20738189
Alignment:
Q  429 ttcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||| ||||||||||||| ||| ||||||    
T  20738115 ttcgtgccaaaaatataaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtacaagaatata 20738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 24164674 - 24164788
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||| ||||||||  |||||||||||||||||||| ||| || ||| | |||   |||||||||||||||||    
T  24164674 attgcaagttatttaatttcaggaacaaatatatgaaagattgagtcttggagcaaaagaaaggagatttggagatgattgaagccaaaaatatgaagat 24164773  T
Q  451 ctgatacaaaaatat 465  Q
    ||  | |||||||||    
T  24164774 cttgtgcaaaaatat 24164788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 535
Target Start/End: Original strand, 15059225 - 15059324
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||||  |||||| || ||||||||||||    
T  15059225 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccccattatacccttttgct 15059323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 15059098 - 15059214
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| |||||  ||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| ||||||| |||||||||  ||||||| | ||    
T  15059098 ttattatatttcgggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgtcaaaaatataaaagatcttacac 15059197  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  15059198 aaaaatatctggtgcaa 15059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 543
Target Start/End: Original strand, 21273408 - 21273523
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacc 526  Q
    |||| |||||||||||||||||||| |||| || |||| ||||| |||||||||||| ||||||  ||| ||||||| |||||| ||||||| || ||||    
T  21273408 attcatgccaaaaatatgaagatctcataccaatatatgttgtgtaaagaatttgaatatcttgcacaataatataa-aagtggcgcgccccattatacc 21273506  T
Q  527 cttttgctgcctttgct 543  Q
     ||||||||| ||||||    
T  21273507 tttttgctgcttttgct 21273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 21497393 - 21497345
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtctt 399  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21497393 attgcaagttattttgttttaggaacaaatatttgaaagatggagtctt 21497345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 12410201 - 12410300
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||  ||||||  ||| |||| |||||||||||| || || ||||| ||||||||  |||||| ||||||    
T  12410201 attgcaagttatttaatttcaggaacaaatattctaaagattgagttttggcgcaaaagaaagaggatttggagctgattcgtgctgaaaatacgaagat 12410300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 414
Target Start/End: Complemental strand, 34223531 - 34223468
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||||||||||| ||||| |||||| ||||||||| ||||  |||||||||||||||||||||    
T  34223531 attgcaagttattatatttcaggaacgaatatttgatagattgagtcttggagcaaaagaaaga 34223468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 23030047 - 23029986
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||| ||||||| |||| ||||||||||||| |||||||  ||||||||||||||||||||    
T  23030047 attgcatgttatttaatttcaggaacaaatatt-gaaagattgagtcttggagcaaaagaaag 23029986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 466
Target Start/End: Original strand, 22170459 - 22170574
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | |||||||||||  ||| ||  |||||||||||||||||||| ||| || ||| | |||||  |  |||||| ||||||    
T  22170459 attgcaagttatttaatttcatgaacaaatattctaaatattgagtcttggagcaaaagaaaggagatttggagttgattcggacagaaaatacgaagat 22170558  T
Q  451 ctgatacaaaaatata 466  Q
     || | ||||||||||    
T  22170559 ttggtgcaaaaatata 22170574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 22940773 - 22940836
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||||| ||||| ||||| |||||| ||||||||| ||||  ||| |||||||||||||||||    
T  22940773 attgcaaattattatatttcaggaacgaatatttgatagattgagtattggagcaaaagaaaga 22940836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 414
Target Start/End: Original strand, 31414319 - 31414381
Alignment:
Q  353 tgcaagttattttattttaggaacaaatatttg-aaagatgaagtcttggagcaaaagaaaga 414  Q
    |||||||||||| |||| | ||||||||||||  ||||||  |||||||||||||||||||||    
T  31414319 tgcaagttatttaatttcaagaacaaatatttctaaagattgagtcttggagcaaaagaaaga 31414381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 31758536 - 31758474
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| ||||| |||||||  ||||||  ||| ||||||||||||||||    
T  31758536 attgcaagttatttaatttcaggaataaatattctaaagattgagttttggagcaaaagaaag 31758474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 41766129 - 41766081
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  41766129 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 41766081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 351 - 503
Target Start/End: Original strand, 38651831 - 38651983
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||| | |||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||| |||||||||||| |||||    
T  38651831 attgcaagttattttatttcatgaacaaatattcaaaagattgagtcttggagcaaaagaaaggagaattggagctgattcatgccaaaaatattaagat 38651930  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    || |||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  38651931 cttatacaaaaatatcttgtgcaaagaattggaagatcttgtgccaaaatata 38651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 428 - 536
Target Start/End: Original strand, 10730916 - 10731023
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| |||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||    
T  10730916 attcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttta-cc 10731014  T
Q  528 ttttgctgc 536  Q
    |||||||||    
T  10731015 ttttgctgc 10731023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 428 - 536
Target Start/End: Original strand, 10944685 - 10944792
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| |||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||    
T  10944685 attcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttta-cc 10944783  T
Q  528 ttttgctgc 536  Q
    |||||||||    
T  10944784 ttttgctgc 10944792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 24125653 - 24125538
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| |||||||||||||||||||| ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  24125653 attgcaagttattatattttaggaacaaatattttaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 24125554  T
Q  450 tctgatacaaaaatat 465  Q
    ||| ||||||||||||    
T  24125553 tcttatacaaaaatat 24125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 10730791 - 10730913
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||| ||||||||||| |||||| ||||| |||| | |||||||||| |||||    
T  10730791 attgcaagttattttattttatgaacaaatattcgaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagat 10730890  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || |||||| |||||||||||    
T  10730891 ctcatgcaaaaa-atattgtgcaa 10730913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 10944560 - 10944682
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||| ||||||||||| |||||| ||||| |||| | |||||||||| |||||    
T  10944560 attgcaagttattttattttatgaacaaatattcgaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagat 10944659  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || |||||| |||||||||||    
T  10944660 ctcatgcaaaaa-atattgtgcaa 10944682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 11903058 - 11902934
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    |||||||||| || ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  11903058 attgcaagttgttatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 11902959  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  11902958 tcttatacaaaaatatctggtgcaa 11902934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 45234129 - 45234005
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  ||||||||||||||| |||| |||||| ||||| |||||||||||||||||  ||||    
T  45234129 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaaaaaaggagaattggagctgattcgtgccaaaaatataaaaga 45234030  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  45234029 tcttatacaaaaatatctggtgcaa 45234005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 13621976 - 13622099
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| |||||||||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||     |||||    
T  13621976 attgcaagttattatattttaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatgtaaaagat 13622075  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || |||||||||||| | ||||||    
T  13622076 cttatacaaaaatatctggtgcaa 13622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 5514051 - 5513937
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||| |||||| |||| |||||||||||||||||||||  |||||||||||||||||||  ||| |||||||| ||||| |||||||||| ||| ||    
T  5514051 attgcaacttatttaatttcaggaacaaatatttgaaagattgagtcttggagcaaaagaaatgagatttagagctgattcgggccaaaaataagaaaat 5513952  T
Q  451 ctgatacaaaaatat 465  Q
     |||| |||||||||    
T  5513951 ttgatgcaaaaatat 5513937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 24125519 - 24125412
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||||||||    
T  24125519 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccgttatacccttttgct 24125421  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  24125420 gcttttgct 24125412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 477
Target Start/End: Complemental strand, 11889392 - 11889309
Alignment:
Q  394 agtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaaga 477  Q
    |||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  11889392 agtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatataaaaatatattatgcaaaga 11889309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 15409696 - 15409812
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||||| | ||    
T  15409696 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttacac 15409795  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  15409796 aaaaatatctggtgcaa 15409812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 5675104 - 5675203
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||  | | ||  |||| ||||| | |||||||||||||||    
T  5675104 attgcaagttatttaattttaggaacaaatatttgaaagattgagtcttggagcaaaagaaatgaaatttgaagctgattcgcggcaaaaatatgaagat 5675203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 465
Target Start/End: Complemental strand, 22181435 - 22181326
Alignment:
Q  356 aagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgat 455  Q
    ||||||||| |||| |||||||||||||| ||||||  |||||||||||||||||||| ||| |  ||||| ||||| |||||||||| |||||| || |    
T  22181435 aagttatttaatttcaggaacaaatatttcaaagattgagtcttggagcaaaagaaaggagattcggagctgattcgggccaaaaatacgaagatttggt 22181336  T
Q  456 acaaaaatat 465  Q
     |||||||||    
T  22181335 gcaaaaatat 22181326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 45244703 - 45244574
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa-----gaagaattagagctaattcgtgccaaaaatat- 444  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||     | |||||| ||||| |||||||||||||||||     
T  45244703 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaagaaaggagaattggagctgattcgtgccaaaaatata 45244604  T
Q  445 gaagatctgatacaaaaatatattgtgcaa 474  Q
     ||||||| |||||||||||| | ||||||    
T  45244603 aaagatcttatacaaaaatatctggtgcaa 45244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 21275024 - 21275131
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||||   ||||| || ||||||||||||    
T  21275024 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgttcaataatataa-aagtggcatgccccattatacccttttgct 21275122  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  21275123 gcttttgct 21275131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 33331466 - 33331367
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||| ||||||||| |||| |||||||| ||||| |||||| ||||||||||||||||||||  ||| || ||||| ||| | |||||||||||||||||    
T  33331466 attggaagttatttaatttcaggaacaagtattttaaagatcaagtcttggagcaaaagaaatgagatttggagctgattagggccaaaaatatgaagat 33331367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 444
Target Start/End: Complemental strand, 3772637 - 3772544
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    |||||||||||||| |||| |||||||||||||  ||||||  |||||||||||||||||||  |||||| ||||| ||| ||| |||||||||    
T  3772637 attgcaagttatttaatttcaggaacaaatattcaaaagatttagtcttggagcaaaagaaaagagaattggagctgatttgtgtcaaaaatat 3772544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 352 - 465
Target Start/End: Complemental strand, 11922831 - 11922718
Alignment:
Q  352 ttgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatc 451  Q
    |||||||||||||||||| | |||||||||||| ||||||   || |||||||||||||||| ||| || ||| | ||||  |||||||||||||||||     
T  11922831 ttgcaagttattttatttcatgaacaaatatttcaaagattgtgtattggagcaaaagaaaggagatttggagtttattcaggccaaaaatatgaagatt 11922732  T
Q  452 tgatacaaaaatat 465  Q
    || | |||||||||    
T  11922731 tggtgcaaaaatat 11922718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 11902923 - 11902867
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  11902923 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgt 11902867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 15409823 - 15409930
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  |||||||||| |||||||||||||| ||| ||||||| ||||||  |||||| || |||||||||| |    
T  15409823 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagagtttgaagatcttgtacaataatataa-aagtggcacgccccattatacccttttgtt 15409921  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  15409922 gcttttgct 15409930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 504
Target Start/End: Complemental strand, 45233994 - 45233926
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataa 504  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| |||||||    
T  45233994 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa 45233926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 9488783 - 9488708
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagct 426  Q
    |||||||||||||| |||| |||||||||||||| ||||||  |||||||||||||||||||| ||| || |||||    
T  9488783 attgcaagttatttaatttcaggaacaaatatttcaaagattgagtcttggagcaaaagaaaggagatttggagct 9488708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 31593664 - 31593731
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  31593664 caaaaatatgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatata 31593731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 16212757 - 16212695
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  16212757 attgcaagttatttaatttcaggaacaaatatatgaaagattgagtcttggagcaaaagaaag 16212695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 501
Target Start/End: Complemental strand, 45244563 - 45244498
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaata 501  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  45244563 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataata 45244498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 3772499 - 3772439
Alignment:
Q  441 atatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaata 501  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  3772499 atatgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataata 3772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 435 - 488
Target Start/End: Complemental strand, 11889302 - 11889249
Alignment:
Q  435 ccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    |||||||||||||||||| |||| ||||||| || |||||||||||||||||||    
T  11889302 ccaaaaatatgaagatctcataccaaaatatcttctgcaaagaatttgaagatc 11889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 31593534 - 31593621
Alignment:
Q  355 caagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaata 443  Q
    ||||||||| ||||| |||||||||||||| ||||||  ||| || ||||||||||||  |||||| ||||| |||||||| |||||||    
T  31593534 caagttattatatttcaggaacaaatattttaaagattgagtatt-gagcaaaagaaatgagaattggagctgattcgtgcaaaaaata 31593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 12346361 - 12346308
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagc 404  Q
    |||||||||||||| |||| |||||||||||||| ||||||  |||||||||||    
T  12346361 attgcaagttatttaatttcaggaacaaatattttaaagattgagtcttggagc 12346308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 13622109 - 13622156
Alignment:
Q  456 acaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    ||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  13622109 acaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 13622156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 5717148 - 5717210
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||| ||||| ||||||||||| ||||||| ||  |||  ||||||||||||||||||||    
T  5717148 attgcaatttattatattttaggaaaaaatattggatggattgagtcttggagcaaaagaaag 5717210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 18983687 - 18983749
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||| |||||| ||||| |||||| |||||||||  |||  ||||||||||||||||||||    
T  18983687 attgcacgttattatatttcaggaacgaatatttgatggattgagtcttggagcaaaagaaag 18983749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 9856887 - 9856960
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcg 432  Q
    ||||| ||||| |||||| ||| ||||| ||||  |||| ||||||||||||||||||| || ||||| |||||    
T  9856887 ttattatatttcaggaacgaatgtttgatagattgagtcatggagcaaaagaaagaagatttggagctgattcg 9856960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 41561852 - 41561791
Alignment:
Q  41 aaatcggaattgattattggataacggttaaacggttcgaagaacggttatggaaaattgaa 102  Q
    |||| |||||||||||||| | |||||| ||| || ||||||| |||||||||| |||||||    
T  41561852 aaattggaattgattattgaaaaacggtgaaaaggatcgaagagcggttatggagaattgaa 41561791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 10631083 - 10631131
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  10631083 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 10631131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 10821713 - 10821761
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  10821713 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 10821761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 18241924 - 18241972
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| |||||| ||||||||| ||||  ||||||||||||||||||||    
T  18241924 tatttcaggaacgaatatttgatagattgagtcttggagcaaaagaaag 18241972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 20617878 - 20617926
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  20617878 tattttaggaacgaatatttgattgattgagtcttggagcaaaagaaag 20617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 428 - 543
Target Start/End: Original strand, 8648626 - 8648741
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  8648626 attcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccc 8648725  T
Q  528 ttttgctgcctttgct 543  Q
    ||||||||| ||||||    
T  8648726 ttttgctgcttttgct 8648741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 353 - 488
Target Start/End: Complemental strand, 30819470 - 30819335
Alignment:
Q  353 tgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatct 452  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||  |||||| ||||| |||| ||||||||||||||||||||    
T  30819470 tgcaagttattttatttcaggaacaaatatttgaaagattgagtcttagagcaaaagaaatgagaattggagctgattcatgccaaaaatatgaagatct 30819371  T
Q  453 gatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
     ||||||||||||||||||||||||| |||||||||    
T  30819370 tatacaaaaatatattgtgcaaagaaattgaagatc 30819335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 351 - 511
Target Start/End: Complemental strand, 39287016 - 39286857
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||| |||||  ||||||  ||||||  |||||||||||||||||||| ||| || ||||| |||| ||||||||||||||||||    
T  39287016 attgcaagttattatatttcaggaaagaatattcaaaagatatagtcttggagcaaaagaaaggagatttggagcttattcatgccaaaaatatgaagat 39286917  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtgg 511  Q
    || || |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39286916 ctcatgcaaaaa-atattgtgcaaagaatttggagatcttgtgcaaaaatataacaagtgg 39286857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 20411894 - 20412017
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||| |||| |||||||||||| |||||    
T  20411894 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaacgagaattggagcttattcatgccaaaaatataaagat 20411993  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || ||||||||||||||||||    
T  20411994 ctcatgcaaaaatatattgtgcaa 20412017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 428 - 536
Target Start/End: Original strand, 20412020 - 20412128
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| ||| |||||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  20412020 attcatgcaaaaaatatgaagatctcatacaaaaatatctggtgcaaagaaattgaagatcttgtgcaaaaatataacaagtggtgcgctccttttaccc 20412119  T
Q  528 ttttgctgc 536  Q
    |||||||||    
T  20412120 ttttgctgc 20412128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 534
Target Start/End: Original strand, 43998149 - 43998317
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||| |||||| ||||||  ||||||  |||||||||||||||||||| |||||||||||| || | |||||||| |||||||||    
T  43998149 attgcaagttattatatttcaggaacgaatattacaaagatttagtcttggagcaaaagaaaggagaattagagcttatccatgccaaaagtatgaagat 43998248  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgct 534  Q
    || |               |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  43998249 ctca---------------tgcaaagaatttgaagatcttgtgcaaaaatatatcaagtggcgcgacccttttacccttttgct 43998317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 490
Target Start/End: Complemental strand, 25405413 - 25405274
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |  ||||||||||| ||||||  |||||||||||||||||||| ||| || ||||| ||| |||||||||||||||||||    
T  25405413 attgcaagttatttcatttcaaaaacaaatatttcaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatatgaagat 25405314  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatctt 490  Q
    || ||||| |||||| ||||||||| | || |||||||||    
T  25405313 cttatacagaaatatcttgtgcaaaaagttagaagatctt 25405274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 16431203 - 16431327
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||   ||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  16431203 attgcaagttattatatttcaggaacaaatattctaaagattgggtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 16431302  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||||| ||||||    
T  16431303 tcttatacaaaaatatatggtgcaa 16431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 17716387 - 17716511
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  ||||||||||||||||||||  ||||| ||||| |||||||||||||||||  ||||    
T  17716387 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggcgaattggagctgattcgtgccaaaaatataaaaga 17716486  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||||| ||||||    
T  17716487 tcttatacaaaaatatatggtgcaa 17716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 490
Target Start/End: Complemental strand, 16382483 - 16382344
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||| |||||| |||| ||||| |||||||| ||||||  |||||||||||||||||||  ||| || ||||| ||| |||||||||||||||||||    
T  16382483 attgcaaattatttaatttcaggaaaaaatatttcaaagattgagtcttggagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagat 16382384  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatctt 490  Q
    ||  | ||||||||| ||||||||| | ||||||||||||    
T  16382383 cttgtgcaaaaatatcttgtgcaaaaagtttgaagatctt 16382344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 8648500 - 8648623
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||| || ||| |||||   ||||||  | |||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||    
T  8648500 attgcaagttattatatttcagaaacgaatatccaaaagatttaatcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagat 8648599  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || || ||||||||||||||||||    
T  8648600 ctcatgcaaaaatatattgtgcaa 8648623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 447
Target Start/End: Original strand, 26191894 - 26191990
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa 447  Q
    |||||||||||||| |||| |||||||||||| ||||||||  |||||||||||||||||||||||| || ||| | ||||| ||||||||||||||    
T  26191894 attgcaagttatttaatttcaggaacaaatatatgaaagattgagtcttggagcaaaagaaagaagatttggaggtgattcgggccaaaaatatgaa 26191990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 44537899 - 44538023
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||| | | |||||||||||||||  ||||    
T  44537899 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagttgaatcgtgccaaaaatataaaaga 44537998  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  44537999 tcttatacaaaaatatctggtgcaa 44538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 48255947 - 48256071
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    |||||||||||||  |||| |||||||||||||  ||||||  |||||||||||||||||||| |||||||||| | |||||||| ||||||||  ||||    
T  48255947 attgcaagttattaaatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattagagttgattcgtgcaaaaaatataaaaga 48256046  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  48256047 tcttatacaaaaatatctggtgcaa 48256071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 474
Target Start/End: Complemental strand, 52236296 - 52236180
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||||| ||||    
T  52236296 ttattatatttcaggaacaaatattctaaagattcagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatac 52236197  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  52236196 aaaaatatttggtgcaa 52236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 351 - 452
Target Start/End: Complemental strand, 16385341 - 16385240
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||  ||  || ||||| ||| | |||||||||||||||||    
T  16385341 attgcaagttatttaattttaggaacaaatattttaaagattgagtcttggagcaaaagaaatgaggtttggagctgatttgggccaaaaatatgaagat 16385242  T
Q  451 ct 452  Q
    ||    
T  16385241 ct 16385240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 44538034 - 44538141
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||| ||||||||    
T  44538034 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatactcttttgct 44538132  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  44538133 gcttttgct 44538141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 462
Target Start/End: Complemental strand, 26134949 - 26134845
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| |||||||||||||  ||||||  |||||| ||||||||||||| |||||| ||||| |||||||||||||||||  ||||||| ||||    
T  26134949 ttattatatttcaggaacaaatattctaaagattgagtcttagagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttatac 26134850  T
Q  458 aaaaa 462  Q
    |||||    
T  26134849 aaaaa 26134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 20861214 - 20861115
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | |||||||||||| ||||||  |||||||||||||||||||  | | || ||||| ||||| |||||||||||||||||    
T  20861214 attgcaagttatttaatttcaagaacaaatattttaaagattgagtcttggagcaaaagaaatgatattttgagctgattcgggccaaaaatatgaagat 20861115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 17716522 - 17716589
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  17716522 caaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaatatata 17716589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 52236169 - 52236102
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  52236169 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 52236102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 436 - 502
Target Start/End: Complemental strand, 26134822 - 26134756
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  26134822 caaaaatatgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat 26134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 16431338 - 16431405
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| || | ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  16431338 caaaaatatgaatatttcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 16431405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 414
Target Start/End: Complemental strand, 28764281 - 28764218
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    |||||||||||||| |||| ||||||||||| |||||||||  ||| |||||||||||||||||    
T  28764281 attgcaagttatttaatttcaggaacaaataattgaaagattgagttttggagcaaaagaaaga 28764218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 48256082 - 48256143
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaa 497  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||| ||||| ||||    
T  48256082 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagaacttgtacaaa 48256143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 13799862 - 13799802
Alignment:
Q  353 tgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||| |||||||||||||  ||||||  ||||||||||||||||||||    
T  13799862 tgcaagttatttaatttcaggaacaaatattataaagattgagtcttggagcaaaagaaag 13799802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 23298512 - 23298587
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagct 426  Q
    |||| ||||||||| |||| |||||| ||||||| ||||||  | |||||||||||||||||| ||| ||||||||    
T  23298512 attgaaagttatttaatttcaggaacgaatatttaaaagattgaatcttggagcaaaagaaaggagatttagagct 23298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 41801962 - 41802069
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgataca 458  Q
    ||||| ||||| |||||| ||| ||||| ||||  |||||||||||||||| |||| || |  ||||| ||||| |  |||||||||||||| ||| |||    
T  41801962 ttattatatttcaggaacgaatgtttgatagattgagtcttggagcaaaaggaagaggattaggagctgattcgggtgaaaaatatgaagat-tgaaaca 41802060  T
Q  459 aaaatatat 467  Q
    |||||||||    
T  41802061 aaaatatat 41802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 8953876 - 8953822
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  8953876 ttattatattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 8953822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 16148863 - 16148802
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    |||||||||||||| |||| |||||||||||||  |||||   ||||||||| |||||||||    
T  16148863 attgcaagttatttaatttcaggaacaaatattctaaagaatgagtcttggaacaaaagaaa 16148802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 17986261 - 17986334
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcg 432  Q
    ||||| ||||| |||||| ||| ||||| ||||  ||||||||||||||||||||| || |  |||||||||||    
T  17986261 ttattatatttcaggaacgaatgtttgatagattgagtcttggagcaaaagaaagaggattatgagctaattcg 17986334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 38045042 - 38045090
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  38045042 tattttaggaacgaatatttgattgattgagtcttggagcaaaagaaag 38045090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 8e-44; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 23140413 - 23140287
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||| |||| |||||||||||| |||||    
T  23140413 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagat 23140314  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||||||||||||||||||    
T  23140313 ctcatgcaaaaatatattgtgcaaaga 23140287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 23552203 - 23552077
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||| |||| |||||||||||| |||||    
T  23552203 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagat 23552104  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||||||||||||||||||    
T  23552103 ctcatgcaaaaatatattgtgcaaaga 23552077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 29568924 - 29568801
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||| |||||||||| ||||||||||||||||||    
T  29568924 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttcgagcaaaggaaaggagaattggagctaattcatgccaaaaatatgaagat 29568825  T
Q  451 ctgatacaaaaatatattgtgcaa 474  Q
    || ||| |||||||| ||||||||    
T  29568824 ctcatataaaaatatcttgtgcaa 29568801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 351 - 475
Target Start/End: Original strand, 44997870 - 44997994
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||  |||| |||| |||||||||||| |||||    
T  44997870 attgcaagttattttattttaggaacaaatatttgaaagatggagtctttgagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagat 44997969  T
Q  451 ctgatacaaaaatatattgtgcaaa 475  Q
    || || |||||||||||||||||||    
T  44997970 ctcatgcaaaaatatattgtgcaaa 44997994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 355 - 488
Target Start/End: Complemental strand, 25337554 - 25337421
Alignment:
Q  355 caagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctga 454  Q
    ||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||| | ||| || ||||| ||| ||||||||||||||||||||| |    
T  25337554 caagttattttatttcaggaacaaatatttaaaagattgagtcttggagcaaaagaatggagatttggagctgatttgtgccaaaaatatgaagatctta 25337455  T
Q  455 tacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    ||||||||||||||||||| | | ||||||||||    
T  25337454 tacaaaaatatattgtgcataaagtttgaagatc 25337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 15583454 - 15583594
Alignment:
Q  351 attgcaagttattt---tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa 447  Q
    ||||||||||||||   ||||| |||||||||||||| ||||||    ||||||||||||| |||| |||||| ||||| ||||||||||||||||||||    
T  15583454 attgcaagttatttaattatttcaggaacaaatatttcaaagattgcatcttggagcaaaataaaggagaattggagctgattcgtgccaaaaatatgaa 15583553  T
Q  448 gatctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    ||||| |||||||||||| ||| ||||||||||||||||||    
T  15583554 gatcttatacaaaaatatcttgcgcaaagaatttgaagatc 15583594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 351 - 461
Target Start/End: Complemental strand, 25859079 - 25858969
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||  |||| |||| || |||||||||||||||    
T  25859079 attgcaagttattttattttagaaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattgaagctgattcatgtcaaaaatatgaagat 25858980  T
Q  451 ctgatacaaaa 461  Q
    || ||||||||    
T  25858979 ctcatacaaaa 25858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 16134624 - 16134500
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| |||||||||||||||||||  ||||||  |||||||||||||||||| ||| |||| ||||| |||||||||||||||||  ||||    
T  16134624 attgcaagttattatattttaggaacaaatattgtaaagattgagtcttggagcaaaagaaggaaaaattggagctgattcgtgccaaaaatataaaaga 16134525  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||||| ||||||    
T  16134524 tcttatacaaaaatatatggtgcaa 16134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 25481170 - 25481277
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcc-ccttttacccttttgct 534  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||| | || ||||||||||||    
T  25481170 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcctcattatacccttttgct 25481268  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  25481269 gcttttgct 25481277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 25488776 - 25488883
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcc-ccttttacccttttgct 534  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||| | || ||||||||||||    
T  25488776 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcctcattatacccttttgct 25488874  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  25488875 gcttttgct 25488883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 32441836 - 32441712
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  32441836 attgcaagttattatatttcaagaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 32441737  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| ||| |||||||| | ||||||    
T  32441736 tcttatagaaaaatatctggtgcaa 32441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 24506968 - 24507083
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||| ||||||||||||  |||||| ||||| |||||||||||||||||  ||||    
T  24506968 attgcaagttattatatttcaggaacaaatattctaaagattgagtctttgagcaaaagaaaagagaattggagctgattcgtgccaaaaatataaaaga 24507067  T
Q  450 tctgatacaaaaatat 465  Q
    ||| ||||||||||||    
T  24507068 tcttatacaaaaatat 24507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 427 - 504
Target Start/End: Original strand, 44997995 - 44998072
Alignment:
Q  427 aattcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataa 504  Q
    ||||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||| |||||||    
T  44997995 aattcatgccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 44998072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 11390811 - 11390935
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| ||||||| |||||  ||||||  |||||||||||||||||||  |||||| ||||| |||||| ||||||||||  ||||    
T  11390811 attgcaagttattatatttcaggaacagatattctaaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaaga 11390910  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  11390911 tcttatacaaaaatatttggtgcaa 11390935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 11407472 - 11407596
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| ||||||| |||||  ||||||  |||||||||||||||||||  |||||| ||||| |||||| ||||||||||  ||||    
T  11407472 attgcaagttattatatttcaggaacagatattctaaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaaga 11407571  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  11407572 tcttatacaaaaatatttggtgcaa 11407596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 519
Target Start/End: Original strand, 24507103 - 24507185
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc 519  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||| |||||||    
T  24507103 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24507185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 440
Target Start/End: Original strand, 20281688 - 20281777
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaa 440  Q
    ||||||||||||| ||||| |||||||||||||  ||| ||  |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  20281688 attgcaagttattatatttcaggaacaaatattctaaacattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 20281777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 428 - 536
Target Start/End: Complemental strand, 23140287 - 23140179
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacc 526  Q
    |||| |||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||| ||| |||| || |||||| ||||||| || ||||    
T  23140287 attcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgccccattatacc 23140189  T
Q  527 cttttgctgc 536  Q
    ||||||||||    
T  23140188 cttttgctgc 23140179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 428 - 536
Target Start/End: Complemental strand, 23552077 - 23551969
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacc 526  Q
    |||| |||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||| ||| |||| || |||||| ||||||| || ||||    
T  23552077 attcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgccccattatacc 23551979  T
Q  527 cttttgctgc 536  Q
    ||||||||||    
T  23551978 cttttgctgc 23551969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 29568799 - 29568738
Alignment:
Q  427 aattcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  29568799 aattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 29568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 19927060 - 19927176
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||   ||||| ||| | |||||||||||||||||  ||||||| ||||    
T  19927060 ttattatattttaggaacaaatattctaaagattgagtcttggagcaaaagaaatttgaatttgagttgattcgtgccaaaaatataaaagatcttatac 19927159  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  19927160 aaaaatatctggtgcaa 19927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 24321479 - 24321577
Alignment:
Q  352 ttgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| |||| ||||||||||||||||||| |  ||||||| |||||||||||| ||| || ||||| |||||  ||| ||||||||||||    
T  24321479 ttgcaagttatttaatttcaggaacaaatatttgaaaggttgagtcttgcagcaaaagaaaggagatttggagctgattcggcccacaaatatgaagat 24321577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 16134489 - 16134382
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    ||||||||| || |||| ||||||||||||  |||||||||||||||||||| |||| ||| ||||||| ||||||  |||||| || ||||||||||||    
T  16134489 caaaaatataaatatctcatacaaaaatatcatgtgcaaagaatttgaagatattgtacaataatataa-aagtggcacgccccattatacccttttgct 16134391  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  16134390 gcttttgct 16134382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 443
Target Start/End: Complemental strand, 41654022 - 41653930
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaata 443  Q
    |||||||||||||| |||| || ||||||||||  ||||||  ||||||||||||||||||||| || || ||||| ||||||||| ||||||    
T  41654022 attgcaagttatttaatttcagaaacaaatattctaaagattgagtcttggagcaaaagaaagaggatttggagctgattcgtgcctaaaata 41653930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 21344899 - 21344800
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | |||||||||||  ||||||  ||||| ||||||||||||||| || || ||||| |||| |||| |||||||||||||    
T  21344899 attgcaagttatttaatttcaagaacaaatattctaaagattcagtctaggagcaaaagaaagaggatttggagctgattcatgcctaaaatatgaagat 21344800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 24371909 - 24371794
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||| ||| ||||||||  |||||||||| ||||||||| ||| || ||||| |||   ||||||| |||||||||    
T  24371909 attgcaagttatttaatttcaggaacaagtatatgaaagattgagtcttggagaaaaagaaaggagatttggagctgattgaggccaaaactatgaagat 24371810  T
Q  451 ctgatacaaaaatata 466  Q
    ||  | ||||||||||    
T  24371809 cttgtgcaaaaatata 24371794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 21852 - 21753
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||  ||||||  ||||| |||| |||||||||| || || ||||| |||| |||| |||||| ||||||    
T  21852 attgcaagttatttaatttcaggaacaaatattctaaagattcagtctaggagtaaaagaaagaggatttggagctcattcatgcctaaaatacgaagat 21753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 20281822 - 20281889
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||| | |||| |||||    
T  20281822 caaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttttacaaatatata 20281889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 440 - 503
Target Start/End: Complemental strand, 32441697 - 32441634
Alignment:
Q  440 aatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    ||||| || |||| |||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  32441697 aatataaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaatatata 32441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 23257477 - 23257415
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| |||||||||||||| ||||||  |||||||||| |||||||||    
T  23257477 attgcaagttatttaatttcaggaacaaatatttcaaagattgagtcttggagtaaaagaaag 23257415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 20851896 - 20851956
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaa 411  Q
    |||||||||||||| |||| | |||||||||||| ||||||  ||||||||||||||||||    
T  20851896 attgcaagttatttaatttcaagaacaaatatttcaaagattgagtcttggagcaaaagaa 20851956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 19927187 - 19927253
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    ||||||||| || |||| ||||||||||||  || |||||||||||||||||||||| |||| ||||    
T  19927187 caaaaatatcaatatctcatacaaaaatatcctgcgcaaagaatttgaagatcttgtacaaatatat 19927253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 25481078 - 25481139
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  | |||||||||||||||||    
T  25481078 attgcaagttattatatttcaggaacaaatattctaaagattgaatcttggagcaaaagaaa 25481139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 25488684 - 25488745
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  | |||||||||||||||||    
T  25488684 attgcaagttattatatttcaggaacaaatattctaaagattgaatcttggagcaaaagaaa 25488745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 19124726 - 19124663
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttg-aaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| |||||||||||| || |||| |  ||||||||||||||||||||    
T  19124726 attgcaagttatttaatttcaggaacaaatatatgaaaagcttgagtcttggagcaaaagaaag 19124663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 25858907 - 25858856
Alignment:
Q  484 agatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctg 535  Q
    ||||||||| |||||||||||||||||| |||||||| ||  ||||||||||    
T  25858907 agatcttgtacaaaaatataacaagtggcgcgcccctattgtccttttgctg 25858856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 28497051 - 28496996
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||| ||||| |||||| |||||||||  ||| ||||||||||||||||||||||    
T  28497051 ttattatatttcaggaacgaatatttgatggattaagtcttggagcaaaagaaaga 28496996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Complemental strand, 25043513 - 25043459
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| ||||| ||||||||||||||||  |||  ||||||||||||||||||||    
T  25043513 ttattatatttcaggaacaaatatttgatggattgagtcttggagcaaaagaaag 25043459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 413
Target Start/End: Original strand, 15027021 - 15027077
Alignment:
Q  358 gttattttattttaggaacaaatatt-tgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||| |||| ||||||||||||  ||||||||  ||||||||||||||||||||    
T  15027021 gttatttaatttcaggaacaaatatggtgaaagattgagtcttggagcaaaagaaag 15027077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 21468800 - 21468752
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  21468800 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 21468752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 24825350 - 24825302
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  24825350 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 24825302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 467
Target Start/End: Complemental strand, 30949645 - 30949537
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgataca 458  Q
    ||||| ||||| |||||| ||||| ||| ||||  ||||||||||||||||||||| || |  ||||| ||||| |  ||||||| ||||||   | |||    
T  30949645 ttattatatttcaggaacgaatatgtgatagattgagtcttggagcaaaagaaagaggattaggagctgattcgggtgaaaaatacgaagattgaagaca 30949546  T
Q  459 aaaatatat 467  Q
    |||||||||    
T  30949545 aaaatatat 30949537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 351 - 477
Target Start/End: Original strand, 24966920 - 24967046
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |||| | | |||||||| |||||    
T  24966920 attgcaagttattttattttaggaacaaatatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatacaaaaaatataaagat 24967019  T
Q  451 ctgatacaaaaatatattgtgcaaaga 477  Q
    || || |||||||||||| ||||||||    
T  24967020 ctcatgcaaaaatatattttgcaaaga 24967046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 492
Target Start/End: Original strand, 21319123 - 21319264
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||||| |||||||||||||||||  ||||||  | ||||||||||||| |||| ||||||  |||| |||||||||||||||||||||||    
T  21319123 attgcaagttatttttttttaggaacaaatattcaaaagattgaatcttggagcaaaaaaaaggagaattgaagctgattcgtgccaaaaatatgaagat 21319222  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    || |||||||||||| |||||||||||| || ||||| ||||    
T  21319223 ctcatacaaaaatatcttgtgcaaagaaattaaagatgttgt 21319264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 24341740 - 24341877
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||||||||||  |||||| ||||||||||||  ||| || ||||| ||| |||||||||||||||||||    
T  24341740 attgcaagttatttaatttgaggaacaaatatttgaaagattgagtcttagagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagat 24341839  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatc 488  Q
    || |||||||||||| ||||||||| | ||||||||||    
T  24341840 cttatacaaaaatatcttgtgcaaaaagtttgaagatc 24341877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 439 - 528
Target Start/End: Complemental strand, 10062 - 9973
Alignment:
Q  439 aaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccct 528  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  10062 aaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccct 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 503
Target Start/End: Complemental strand, 10184 - 10035
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||| |||||| ||||||  ||||||  |||||||||||||||||||| | |||| ||| | |||| ||||||||||||||||||    
T  10184 attgcaagttattatatttcaggaacgaatattacaaagatttagtcttggagcaaaagaaaggaaaattggagtttattcatgccaaaaatatgaagat 10085  T
Q  451 ctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    || || |||||||||||||||||   ||| |||||||||  ||||||||||||    
T  10084 ctcatgcaaaaatatattgtgca---aatatgaagatctcatgcaaaaatata 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 434 - 543
Target Start/End: Complemental strand, 14351937 - 14351828
Alignment:
Q  434 gccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttg 532  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||||||    
T  14351937 gccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttg 14351839  T
Q  533 ctgcctttgct 543  Q
    |||| ||||||    
T  14351838 ctgcttttgct 14351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 18161657 - 18161781
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| ||||||||||| |||||  ||||    
T  18161657 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaacaatataaaaga 18161756  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  18161757 tcttatacaaaaatatctggtgcaa 18161781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 18161792 - 18161898
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctg 535  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||| |||||| || |||| ||||||||    
T  18161792 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccattataccattttgctg 18161890  T
Q  536 cctttgct 543  Q
    | ||||||    
T  18161891 cttttgct 18161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 18007782 - 18007882
Alignment:
Q  350 tattgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaaga 449  Q
    |||| ||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||  || |  ||||| ||||||||||||||||||||||    
T  18007782 tatttcaagttattttatttcaggaacaaatatttcaaagattgagtcttggagcaaaagaaaggtgattcggagctgattcgtgccaaaaatatgaaga 18007881  T
Q  450 t 450  Q
    |    
T  18007882 t 18007882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 543
Target Start/End: Original strand, 24967046 - 24967161
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacc 526  Q
    |||| ||| |||||||||||||| | |||| ||||||| |||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||    
T  24967046 attcatgcaaaaaatatgaagatatcatactaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacc 24967144  T
Q  527 cttttgctgcctttgct 543  Q
    |||||||||| ||||||    
T  24967145 cttttgctgcttttgct 24967161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 477
Target Start/End: Complemental strand, 14352060 - 14351943
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgataca 458  Q
    ||||| ||||| |||||||||||||  ||||||  |||||||||||||||||| | |||||| ||||| |||| |||||||| ||| ||||||| || ||    
T  14352060 ttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaagggagaattggagcttattcatgccaaaattataaagatcttatgca 14351961  T
Q  459 aaaatatattgtgcaaaga 477  Q
    |||| ||||||||||||||    
T  14351960 aaaa-atattgtgcaaaga 14351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 24222013 - 24221906
Alignment:
Q  358 gttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatac 457  Q
    ||||||| |||| | ||||||||||  |||||||  |||||||||||||||||||| ||| ||||||||||||   |||||||||||||||||||  | |    
T  24222013 gttatttaatttcatgaacaaatataagaaagatcgagtcttggagcaaaagaaaggagatttagagctaattgaggccaaaaatatgaagatcttgtgc 24221914  T
Q  458 aaaaatat 465  Q
    ||||||||    
T  24221913 aaaaatat 24221906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 21139339 - 21139402
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||||||||||| ||||| |||||| ||||||||| ||||  |||||||||||||||||||||    
T  21139339 attgcaagttattatatttcaggaacgaatatttgatagattgagtcttggagcaaaagaaaga 21139402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 14162561 - 14162499
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| |||||||||||||  ||||||  ||||||||||||||||||||    
T  14162561 attgcaagttatttaatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaag 14162499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 19792645 - 19792532
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | |||| ||||||  ||||||  |||||| ||||||||||||||||| |  ||||| |||||  | ||||||||||||||    
T  19792645 attgcaagttatttaatttcatgaacgaatattctaaagattgagtcttagagcaaaagaaagaagattcggagctgattcggactaaaaatatgaagat 19792546  T
Q  451 ctgatacaaaaata 464  Q
     || | ||||||||    
T  19792545 ttggtgcaaaaata 19792532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 414
Target Start/End: Complemental strand, 23222409 - 23222347
Alignment:
Q  352 ttgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||| |||||    
T  23222409 ttgcaagttatttaatttcaggaacgaataattgaaagattgagtcttggagcaaaataaaga 23222347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 23455265 - 23455338
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcg 432  Q
    ||||| |||||||||||| ||| ||||| ||||  ||||||||||||||||||||| || || ||||| |||||    
T  23455265 ttattatattttaggaacgaatgtttgatagattgagtcttggagcaaaagaaagaggatttggagctgattcg 23455338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 26012672 - 26012727
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaaga 414  Q
    ||||| ||||| |||||| ||| ||||| |||| ||||||||||||||||||||||    
T  26012672 ttattatatttcaggaacgaatgtttgatagattaagtcttggagcaaaagaaaga 26012727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 31470224 - 31470169
Alignment:
Q  358 gttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||| ||||||||||||||||| | ||| ||  ||||||||||||||||||||    
T  31470224 gttatttaattttaggaacaaatatgtcaaaaattgagtcttggagcaaaagaaag 31470169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 413
Target Start/End: Original strand, 20263092 - 20263146
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||| ||||| |||||| ||||||||| ||||  ||||||||||||||||||||    
T  20263092 ttattatatttcaggaacgaatatttgatagattgagtcttggagcaaaagaaag 20263146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 26853822 - 26853854
Alignment:
Q  356 aagttattttattttaggaacaaatatttgaaa 388  Q
    |||||||||||||| ||||||||||||||||||    
T  26853822 aagttattttatttcaggaacaaatatttgaaa 26853854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 49524 - 49650
Alignment:
Q  351 attgcaagttattttattttaggaacaa---atatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaa 447  Q
    ||||||||||||||||||||||||| ||   |||||||||||||| ||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||    
T  49524 attgcaagttattttattttaggaataataaatatttgaaagatggagtcttggagcaaaagaaataagaattggagcttattcatgccaaaaatatgaa 49623  T
Q  448 gatctgatacaaaaatatattgtgcaa 474  Q
    ||||| || ||||||||||||||||||    
T  49624 gatctcatgcaaaaatatattgtgcaa 49650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 436 - 543
Target Start/End: Original strand, 49661 - 49768
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttacccttttgctg 535  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| |||||||||||    
T  49661 caaaaatatgaagatctcatacgaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccctttttgcccttttgctg 49760  T
Q  536 cctttgct 543  Q
    | ||||||    
T  49761 cttttgct 49768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 76; Significance: 7e-35; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 19964 - 19849
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||| |||| |||||||||||| |||||    
T  19964 attgcaagttatcttattttaggaacaaatatttgaaagatggagtcttggagaaaaagaaaggagaattggagcttattcatgccaaaaatataaagat 19865  T
Q  451 ctgatacaaaaatata 466  Q
    || || ||||||||||    
T  19864 ctcatgcaaaaatata 19849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 428 - 511
Target Start/End: Complemental strand, 19838 - 19755
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtgg 511  Q
    ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  19838 attcgtgccaaaaatatgaagatctcatacaaaaatttcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtgg 19755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 10241 - 10126
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| |||||||||||||||||||| ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  10241 attgcaagttattatattttaggaacaaatattttaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 10142  T
Q  450 tctgatacaaaaatat 465  Q
    ||| ||||||||||||    
T  10141 tcttatacaaaaatat 10126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 10107 - 10000
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||||||||||||    
T  10107 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccgttatacccttttgct 10009  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  10008 gcttttgct 10000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 428 - 535
Target Start/End: Complemental strand, 9181 - 9074
Alignment:
Q  428 attcgtgccaaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgccccttttaccc 527  Q
    |||| |||||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||    
T  9181 attcatgccaaaaatatgaagatctcatgcaaaaatctattgtgcaaagaatttgaacatcttgtcaaaaaatataacaagtggcgcgacccttttaccc 9082  T
Q  528 ttttgctg 535  Q
    ||||||||    
T  9081 ttttgctg 9074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 468
Target Start/End: Complemental strand, 9307 - 9190
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    ||||||||||||| ||||| |||||| ||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||||||||    
T  9307 attgcaagttattatatttcaggaacgaatattcaaaagatttagtcttggagcaaaagaaaggagaattggagcttattcatgccataaatatgaagat 9208  T
Q  451 ctgatacaaaaatatatt 468  Q
    || || ||||||||||||    
T  9207 ctcatgcaaaaatatatt 9190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 159 - 41
Alignment:
Q  348 actattgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatg-a 446  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||| |    
T  159 actattgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaa 60  T
Q  447 agatctgatacaaaaatat 465  Q
    |||||| ||||||||||||    
T  59 agatcttatacaaaaatat 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 464
Target Start/End: Original strand, 48447 - 48561
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatg-aaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  48447 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaaga 48546  T
Q  450 tctgatacaaaaata 464  Q
    ||| |||||||||||    
T  48547 tcttatacaaaaata 48561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 436 - 541
Target Start/End: Original strand, 48582 - 48687
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcc-ccttttacccttttgct 534  Q
    |||||||||||| |||  ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||| | || ||||||||||||    
T  48582 caaaaatatgaatatcccatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcctcattatacccttttgct 48680  T
Q  535 gcctttg 541  Q
    || ||||    
T  48681 gcttttg 48687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 359 - 492
Target Start/End: Original strand, 6901 - 7034
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgataca 458  Q
    ||||| ||||| | |||| ||||||  ||||||  ||||||||||||||||||||  ||||| ||||| |||| |||||||||||||||||||| ||| |    
T  6901 ttattatatttcacgaacgaatattcaaaagatttagtcttggagcaaaagaaaggggaattggagctgattcatgccaaaaatatgaagatctcatata 7000  T
Q  459 aaaatatattgtgcaaagaatttgaagatcttgt 492  Q
    ||||||| |||||||||||||| |||||||||||    
T  7001 aaaatatcttgtgcaaagaattagaagatcttgt 7034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 20816 - 20940
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||| |||||  |||||||||||||||||||||||  ||||    
T  20816 attgcaagttattatatttcaagaacaaatattctaaagattgagtcttggagcaaaagaaaggagaatcggagctaattcgtgccaaaaatataaaaga 20915  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  20916 tcttatacaaaaatatctggtgcaa 20940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 20951 - 21018
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  20951 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 1077 - 1191
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||| ||||||  |||||||||||||||||||| ||| || ||||| ||||| |||||||||| ||||||    
T  1077 attgcaagttatttaatttcaggaacaaatatttcaaagattgagtcttggagcaaaagaaaggagatttggagctgattcgagccaaaaatacgaagat 1176  T
Q  451 ctgatacaaaaatat 465  Q
     || | |||||||||    
T  1177 ttggtgcaaaaatat 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 474
Target Start/End: Original strand, 3147 - 3271
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||    
T  3147 attgcaagttattatatttcatgaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaga 3246  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||  |||||||||||| | ||||||    
T  3247 tcatatacaaaaatatctggtgcaa 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 3282 - 3349
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| || | | ||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  3282 caaaaatatgaatatatcacacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 26640 - 26756
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||| |||||| ||| | |||||||||||||||||  ||||||| ||||    
T  26640 ttattatattttaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatac 26739  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  26740 aaaaatatctggtgcaa 26756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 473
Target Start/End: Original strand, 21360 - 21456
Alignment:
Q  376 caaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagatctgatacaaaaatatattgtgca 473  Q
    ||||||||| ||||||  |||||||||||||||||||| ||| || ||| | ||| ||||||||||||||||||||  |||||||||||| |||||||    
T  21360 caaatatttaaaagattgagtcttggagcaaaagaaaggaga-ttggagttgatttgtgccaaaaatatgaagatcatatacaaaaatatcttgtgca 21456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 383
Target Start/End: Original strand, 21033 - 21065
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatt 383  Q
    ||||||||||||||||||| |||||||||||||    
T  21033 attgcaagttattttatttcaggaacaaatatt 21065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 9312 - 9187
Alignment:
Q  351 attgcaagttattttattttaggaacaaa-tatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaag 448  Q
    ||||||||||||| ||||| ||||||||| ||||  ||||||  |||||||||||||| ||||| |||||| ||||| |||||||||||||||||  |||    
T  9312 attgcaagttattatatttcaggaacaaaatattctaaagattgagtcttggagcaaatgaaaggagaattggagctgattcgtgccaaaaatataaaag 9213  T
Q  449 atctgatacaaaaatatattgtgcaa 474  Q
    |||| |||||||||||| | ||||||    
T  9212 atcttatacaaaaatatctggtgcaa 9187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 9176 - 9109
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatata 503  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  9176 caaaaatatgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgttcaaatatata 9109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 9523 - 9399
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatg-aaga 449  Q
    ||||||||||||| ||||| ||||| |||||||  ||||||  ||||||| || ||||||||| |||||| ||| | |||||||||||||||||| ||||    
T  9523 attgcaagttattatatttcaggaataaatattctaaagattgagtcttgcagaaaaagaaaggagaattggagttgattcgtgccaaaaatatgaaaga 9424  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  9423 tcttatacaaaaatatctggtgcaa 9399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 9388 - 9281
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  |||| |||||||||||||||||||| ||| ||||||| |||||| ||||||| || ||  ||||||||    
T  9388 caaaaatatgaatatctcatacaaaaatatcatgtgaaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattataatcttttgct 9290  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  9289 gcttttgct 9281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 474
Target Start/End: Complemental strand, 19376 - 19252
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| || ||||||||||  ||||||  |||||||||||||| ||||  |||||| ||||| |||||||||||||||||  ||||    
T  19376 attgcaagttattatatttcagtaacaaatattcaaaagattgagtcttggagcaaatgaaaagagaattggagctgattcgtgccaaaaatataaaaga 19277  T
Q  450 tctgatacaaaaatatattgtgcaa 474  Q
    ||| |||||||||||| | ||||||    
T  19276 tcttatacaaaaatatctggtgcaa 19252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 19241 - 19134
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgct 534  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||  ||| ||||||| |||||| ||||||| || |||| |||||||    
T  19241 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgaacaataatataa-aagtggcgcgccccattatacctttttgct 19143  T
Q  535 gcctttgct 543  Q
    || ||||||    
T  19142 gcttttgct 19134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 520422 - 520536
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| |||||||||||||| ||||||  |||||||||||||||||||| ||| || | ||| ||||| ||  |||||| ||||||    
T  520422 attgcaagttatttaatttcaggaacaaatattttaaagattgagtcttggagcaaaagaaaggagatttggggctgattcgggctgaaaatacgaagat 520521  T
Q  451 ctgatacaaaaatat 465  Q
     | ||||||||||||    
T  520522 ttaatacaaaaatat 520536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 83064 - 83002
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| ||||| |||||||| ||||||  |||||| |||||| ||||||    
T  83064 attgcaagttatttaatttcaggaataaatatttcaaagattgagtcttagagcaagagaaag 83002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 23204 - 23091
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||| ||||| |||| ||||||||||||| |||||||   |||||||||||||||||||  || || ||||| ||||| |||||||||||||||||    
T  23204 attgcaagatatttaatttcaggaacaaatattcgaaagattgcgtcttggagcaaaagaaaggtgatttggagctgattcgggccaaaaatatgaagat 23105  T
Q  451 ctgatacaaaaata 464  Q
     | || ||||||||    
T  23104 tttatgcaaaaata 23091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 49; Significance: 9e-19; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 22929 - 23045
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||| ||||||  |||| |||||||||||||||||  ||||||| ||||    
T  22929 ttattatatttcacgaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattgcagctgattcgtgccaaaaatataaaagatcttatac 23028  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  23029 aaaaatatctggtgcaa 23045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 474
Target Start/End: Original strand, 100034 - 100150
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgatac 457  Q
    ||||| ||||| | |||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||||||| | ||    
T  100034 ttattatatttcaagaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagcttattcgtgccaaaaatataaaagatcttacac 100133  T
Q  458 aaaaatatattgtgcaa 474  Q
    |||||||| | ||||||    
T  100134 aaaaatatctggtgcaa 100150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 504
Target Start/End: Original strand, 100161 - 100229
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataa 504  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  100161 caaaaatatgaatatgtcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataatataa 100229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 497
Target Start/End: Original strand, 23058 - 23117
Alignment:
Q  438 aaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaa 497  Q
    |||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||||    
T  23058 aaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaa 23117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 465
Target Start/End: Complemental strand, 38406 - 38291
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaaga 449  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  ||| ||  |||||||||||| |||||| ||||| |||||||||||||||||  || |    
T  38406 attgcaagttattatatttcaggaacaaatattctaaagattgagttttttagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaata 38307  T
Q  450 tctgatacaaaaatat 465  Q
    ||| ||||||||||||    
T  38306 tcttatacaaaaatat 38291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 38271 - 38210
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaa 497  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||| || |||||||||    
T  38271 caaaaatatgaatatctcatacaaaaatattttgtgcaaagaatttgaatattttgtgcaaa 38210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 543
Target Start/End: Complemental strand, 38224 - 38142
Alignment:
Q  461 aatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgctgcctttgct 543  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||  |||||| || |||||||||| ||| ||||||    
T  38224 aatattttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgccccattatacccttttgttgcttttgct 38142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 474
Target Start/End: Original strand, 61515 - 61630
Alignment:
Q  360 tattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat-gaagatctgataca 458  Q
    |||| ||||| |||||||||||||   |||||  |||||||||||||||||||| |||||| ||||| |||||| ||||||||||  ||||||| |||||    
T  61515 tattatatttcaggaacaaatattctgaagattgagtcttggagcaaaagaaaggagaattggagctgattcgttccaaaaatataaaagatcttataca 61614  T
Q  459 aaaatatattgtgcaa 474  Q
    ||||||| | ||||||    
T  61615 aaaatatctggtgcaa 61630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 61654 - 61743
Alignment:
Q  454 atacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggggcgcccc-ttttacccttttgctgcctttgct 543  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||  |||||| || |||||||||||||| ||||||    
T  61654 atacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgccccattatacccttttgctgcttttgct 61743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 46; Significance: 6e-17; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 6105 - 6190
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    ||||| ||||| || ||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  6105 ttattatatttcagaaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 6190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 10719 - 10804
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    ||||| ||||| || ||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  10719 ttattatatttcagaaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 10804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 6210 - 6276
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    |||||||||||| |||| ||||||||||||  |||| ||| |||||||||||||||| |||| ||||    
T  6210 caaaaatatgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 6276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 10824 - 10890
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    |||||||||||| |||| ||||||||||||  |||| ||| |||||||||||||||| |||| ||||    
T  10824 caaaaatatgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 8714 - 8799
Alignment:
Q  359 ttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatat 444  Q
    ||||| ||||| || ||||||||||  ||||||  |||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  8714 ttattatatttcagaaacaaatattctaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 8799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 8819 - 8885
Alignment:
Q  436 caaaaatatgaagatctgatacaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatat 502  Q
    |||||||||||| |||| ||||||||||||  |||| ||| |||||||||||||||| |||| ||||    
T  8819 caaaaatatgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 13830 - 13905
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagct 426  Q
    |||||||||||||| ||||||| ||||||||||||||||||  | |||||||||||||||||| ||| || |||||    
T  13830 attgcaagttatttaattttagtaacaaatatttgaaagatttattcttggagcaaaagaaaggagatttggagct 13905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 28781 - 28850
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaatt 420  Q
    ||||||||||||| ||||| |||||||||||||  ||||||  |||||||||||||||||||| ||||||    
T  28781 attgcaagttattatatttcaggaacaaatattctaaagattgagtcttggagcaaaagaaaggagaatt 28850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 167793 - 167907
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||| ||||||| ||||  |||| ||| || ||||||||  ||||||||||||||||||| | || || ||||| |||   |||||||||||||||||    
T  167793 attgcatgttatttaatttctggaataaagatatgaaagattgagtcttggagcaaaagaaataggatttggagctgattgaggccaaaaatatgaagat 167892  T
Q  451 ctgatacaaaaatat 465  Q
    ||  | |||||||||    
T  167893 cttgtgcaaaaatat 167907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 466
Target Start/End: Original strand, 172410 - 172525
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaagaagaattagagctaattcgtgccaaaaatatgaagat 450  Q
    |||||||||||||| |||| | ||||| |||||  ||||||  ||||||||||||| ||||||| || || ||||| ||||| ||  ||||||  |||||    
T  172410 attgcaagttatttaatttcaagaacatatattctaaagattgagtcttggagcaacagaaagaggatttggagctgattcgggctgaaaatacaaagat 172509  T
Q  451 ctgatacaaaaatata 466  Q
     | | |||||||||||    
T  172510 ttaagacaaaaatata 172525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 9512 - 9450
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| |||| ||||||||||| |  ||||||  |||||||||| |||||||||    
T  9512 attgcaagttatttaatttcaggaacaaatactgtaaagattgagtcttggagaaaaagaaag 9450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 31336 - 31398
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||||| ||||||| |||||| ||   ||||||  ||||||||||||||||||||    
T  31336 attgcaagttatttaattttagcaacaaaaatggtaaagattgagtcttggagcaaaagaaag 31398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 20994 - 21055
Alignment:
Q  351 attgcaagttattttattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaa 412  Q
    ||||||| ||||| || || |||||||||||||  ||||||  |||||||||||||||||||    
T  20994 attgcaaattattatagttcaggaacaaatattctaaagattgagtcttggagcaaaagaaa 21055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 2462 - 2414
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  2462 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 2414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 46963 - 46915
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  46963 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 46915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 32645 - 32597
Alignment:
Q  365 tattttaggaacaaatatttgaaagatgaagtcttggagcaaaagaaag 413  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||    
T  32645 tattttaggaacgaatatttgatggattgagtcttggagcaaaagaaag 32597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 32449 - 32393
Alignment:
Q  358 gttattttattttaggaacaaatatt-tgaaagatgaagtcttggagcaaaagaaag 413  Q
    ||||||| |||| ||||||||||||  ||||||||  ||||||||||||||||||||    
T  32449 gttatttaatttcaggaacaaatatggtgaaagattgagtcttggagcaaaagaaag 32393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University