View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15254_low_59 (Length: 253)
Name: NF15254_low_59
Description: NF15254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15254_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 42741675 - 42741644
Alignment:
| Q |
17 |
agggtaaagaaaggaagattgtagcaaaaata |
48 |
Q |
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| T |
42741675 |
agggtaaagaaaggaagattgtagcaaaaata |
42741644 |
T |
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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 42741534 - 42741502
Alignment:
| Q |
157 |
atctgtgtcaatatcaagagggaatattgtaac |
189 |
Q |
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| T |
42741534 |
atctgagtcaatatcaagagggaatattgtaac |
42741502 |
T |
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