View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15254_low_73 (Length: 227)

Name: NF15254_low_73
Description: NF15254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15254_low_73
NF15254_low_73
[»] chr3 (40 HSPs)
chr3 (24-207)||(2567087-2567270)
chr3 (21-208)||(52684441-52684628)
chr3 (21-208)||(21006180-21006367)
chr3 (116-208)||(30787378-30787470)
chr3 (116-208)||(45057118-45057210)
chr3 (116-208)||(47642215-47642307)
chr3 (116-208)||(13353012-13353104)
chr3 (116-208)||(28968720-28968812)
chr3 (116-208)||(19421625-19421717)
chr3 (116-208)||(19878919-19879011)
chr3 (116-208)||(7899536-7899627)
chr3 (20-108)||(10224550-10224638)
chr3 (20-108)||(45532461-45532549)
chr3 (25-108)||(48123460-48123543)
chr3 (116-200)||(983395-983479)
chr3 (20-108)||(1679080-1679168)
chr3 (116-208)||(20509973-20510065)
chr3 (116-208)||(21157545-21157638)
chr3 (116-208)||(38888902-38888995)
chr3 (20-108)||(28705368-28705456)
chr3 (116-203)||(212715-212802)
chr3 (137-208)||(22610580-22610650)
chr3 (137-208)||(25936382-25936452)
chr3 (116-187)||(55268854-55268925)
chr3 (20-89)||(25936496-25936565)
chr3 (20-108)||(52505223-52505310)
chr3 (116-185)||(6134222-6134291)
chr3 (114-167)||(28548251-28548304)
chr3 (137-208)||(7327968-7328039)
chr3 (116-167)||(25700970-25701021)
chr3 (137-208)||(45532366-45532436)
chr3 (137-208)||(1678984-1679055)
chr3 (137-208)||(37996594-37996665)
chr3 (137-208)||(52505127-52505198)
chr3 (116-150)||(2122918-2122952)
chr3 (116-150)||(29916001-29916035)
chr3 (174-208)||(29916037-29916071)
chr3 (116-150)||(29965154-29965188)
chr3 (174-208)||(29965190-29965224)
chr3 (169-206)||(35390125-35390162)
[»] chr4 (29 HSPs)
chr4 (30-208)||(52721477-52721655)
chr4 (24-208)||(24784489-24784673)
chr4 (21-208)||(39957802-39957989)
chr4 (114-208)||(24823593-24823687)
chr4 (116-208)||(24793548-24793640)
chr4 (116-206)||(44521865-44521955)
chr4 (116-208)||(3109122-3109214)
chr4 (20-208)||(53322971-53323154)
chr4 (116-208)||(17892457-17892549)
chr4 (116-204)||(36943878-36943966)
chr4 (20-108)||(31226969-31227057)
chr4 (116-208)||(55900965-55901057)
chr4 (25-108)||(52572826-52572909)
chr4 (20-208)||(41146236-41146419)
chr4 (20-108)||(8063496-8063584)
chr4 (116-208)||(46431751-46431842)
chr4 (25-108)||(14795643-14795726)
chr4 (20-108)||(3402973-3403061)
chr4 (117-208)||(722447-722538)
chr4 (117-208)||(754380-754471)
chr4 (116-167)||(2586545-2586596)
chr4 (116-167)||(42630342-42630393)
chr4 (116-157)||(49470489-49470530)
chr4 (137-208)||(3402877-3402948)
chr4 (137-208)||(8063400-8063471)
chr4 (123-165)||(37992394-37992436)
chr4 (116-150)||(51859004-51859038)
chr4 (20-85)||(52122361-52122426)
chr4 (176-208)||(51859042-51859074)
[»] chr6 (21 HSPs)
chr6 (30-208)||(3212692-3212870)
chr6 (21-208)||(32018218-32018397)
chr6 (116-206)||(7255130-7255220)
chr6 (20-167)||(22988964-22989114)
chr6 (20-167)||(23799282-23799432)
chr6 (20-109)||(8357511-8357600)
chr6 (20-108)||(7188179-7188267)
chr6 (116-208)||(10894336-10894428)
chr6 (20-108)||(1036215-1036303)
chr6 (116-208)||(6707857-6707950)
chr6 (116-208)||(13061191-13061283)
chr6 (121-197)||(31079813-31079889)
chr6 (116-208)||(11105495-11105588)
chr6 (136-208)||(26327524-26327596)
chr6 (137-203)||(8357624-8357689)
chr6 (137-208)||(1036119-1036190)
chr6 (116-208)||(13045198-13045285)
chr6 (116-167)||(13607643-13607694)
chr6 (137-208)||(7188082-7188154)
chr6 (116-150)||(27084183-27084217)
chr6 (137-208)||(31195654-31195725)
[»] chr8 (30 HSPs)
chr8 (21-208)||(8170923-8171110)
chr8 (21-208)||(40412657-40412844)
chr8 (118-208)||(27109012-27109102)
chr8 (20-108)||(37669199-37669287)
chr8 (20-108)||(36484054-36484142)
chr8 (20-108)||(43771115-43771203)
chr8 (20-108)||(45216621-45216709)
chr8 (20-208)||(12579841-12580024)
chr8 (20-108)||(4246558-4246646)
chr8 (20-108)||(5540051-5540139)
chr8 (116-208)||(7411811-7411903)
chr8 (20-108)||(34900770-34900858)
chr8 (20-108)||(28875966-28876054)
chr8 (137-208)||(32760098-32760168)
chr8 (116-208)||(32425130-32425215)
chr8 (147-208)||(36484176-36484237)
chr8 (116-208)||(38388876-38388968)
chr8 (137-208)||(32638519-32638589)
chr8 (119-208)||(29355836-29355919)
chr8 (137-208)||(4246671-4246742)
chr8 (137-208)||(28875870-28875941)
chr8 (137-208)||(34900674-34900745)
chr8 (137-208)||(45216525-45216596)
chr8 (137-203)||(22201128-22201194)
chr8 (137-208)||(37669312-37669382)
chr8 (116-150)||(3892173-3892207)
chr8 (116-150)||(5818206-5818240)
chr8 (162-208)||(43771009-43771055)
chr8 (169-206)||(19947681-19947718)
chr8 (137-208)||(5540164-5540235)
[»] chr2 (23 HSPs)
chr2 (21-208)||(45158993-45159180)
chr2 (119-208)||(31236003-31236092)
chr2 (20-109)||(4169920-4170009)
chr2 (116-208)||(35342527-35342618)
chr2 (20-108)||(6497071-6497159)
chr2 (20-108)||(6124796-6124884)
chr2 (116-208)||(10573703-10573795)
chr2 (20-108)||(22484898-22484986)
chr2 (20-108)||(40308237-40308325)
chr2 (116-208)||(2319484-2319576)
chr2 (116-208)||(34146389-34146481)
chr2 (116-208)||(3545398-3545489)
chr2 (137-203)||(6496981-6497046)
chr2 (116-208)||(21104691-21104784)
chr2 (137-208)||(7807160-7807231)
chr2 (137-208)||(4169825-4169896)
chr2 (137-208)||(22485011-22485082)
chr2 (137-208)||(40308141-40308212)
chr2 (116-167)||(9293314-9293365)
chr2 (174-208)||(4355557-4355591)
chr2 (116-150)||(44156807-44156841)
chr2 (116-145)||(4355521-4355550)
chr2 (116-145)||(5588247-5588276)
[»] chr7 (32 HSPs)
chr7 (30-208)||(9283678-9283856)
chr7 (30-208)||(25969627-25969805)
chr7 (30-208)||(9250128-9250304)
chr7 (30-161)||(47719952-47720083)
chr7 (20-208)||(11058558-11058744)
chr7 (116-208)||(23078926-23079018)
chr7 (116-208)||(1400085-1400177)
chr7 (116-208)||(15878241-15878333)
chr7 (116-208)||(33454276-33454368)
chr7 (20-208)||(36661095-36661278)
chr7 (116-208)||(36763612-36763705)
chr7 (20-108)||(11830319-11830407)
chr7 (116-208)||(36757833-36757925)
chr7 (116-208)||(36767357-36767449)
chr7 (116-208)||(35160070-35160160)
chr7 (20-108)||(27397516-27397604)
chr7 (118-196)||(21180044-21180122)
chr7 (20-108)||(40096288-40096376)
chr7 (116-187)||(40041584-40041655)
chr7 (116-167)||(44959993-44960044)
chr7 (137-208)||(27555150-27555221)
chr7 (147-203)||(47238060-47238116)
chr7 (137-208)||(11830432-11830502)
chr7 (137-208)||(16851046-16851117)
chr7 (137-208)||(48163671-48163742)
chr7 (169-208)||(1042885-1042924)
chr7 (125-208)||(38064881-38064969)
chr7 (174-208)||(554729-554763)
chr7 (116-150)||(21409596-21409630)
chr7 (116-150)||(24956457-24956491)
chr7 (137-208)||(27354184-27354255)
chr7 (137-208)||(40096401-40096472)
[»] chr5 (30 HSPs)
chr5 (30-208)||(30777227-30777405)
chr5 (21-167)||(6242901-6243047)
chr5 (21-207)||(11907405-11907591)
chr5 (116-208)||(27085558-27085650)
chr5 (44-167)||(9729489-9729613)
chr5 (116-208)||(17138071-17138163)
chr5 (116-208)||(22738047-22738138)
chr5 (20-108)||(1639188-1639276)
chr5 (116-208)||(5722186-5722278)
chr5 (116-208)||(18001783-18001875)
chr5 (20-108)||(26794392-26794480)
chr5 (116-208)||(34032571-34032663)
chr5 (116-187)||(41233515-41233586)
chr5 (116-208)||(26691825-26691918)
chr5 (116-208)||(26961557-26961650)
chr5 (116-208)||(30284424-30284514)
chr5 (20-108)||(12852741-12852829)
chr5 (116-208)||(5612258-5612351)
chr5 (20-108)||(9792927-9793015)
chr5 (20-108)||(33830392-33830480)
chr5 (20-108)||(39690130-39690218)
chr5 (162-208)||(3701319-3701365)
chr5 (137-208)||(39690034-39690105)
chr5 (137-208)||(1639093-1639163)
chr5 (137-208)||(9793040-9793111)
chr5 (116-167)||(11694412-11694461)
chr5 (116-150)||(3934662-3934696)
chr5 (174-208)||(35746160-35746194)
chr5 (20-85)||(32707323-32707388)
chr5 (137-208)||(33830505-33830575)
[»] chr1 (33 HSPs)
chr1 (116-208)||(36551593-36551685)
chr1 (116-208)||(24851679-24851771)
chr1 (116-208)||(24589940-24590033)
chr1 (116-208)||(2472740-2472832)
chr1 (116-208)||(47654873-47654965)
chr1 (20-108)||(3427469-3427557)
chr1 (20-108)||(6916263-6916351)
chr1 (20-108)||(8132801-8132889)
chr1 (20-108)||(38331068-38331156)
chr1 (20-108)||(52895102-52895190)
chr1 (20-103)||(25257237-25257320)
chr1 (126-208)||(3708103-3708185)
chr1 (20-208)||(5984806-5984989)
chr1 (25-208)||(30324344-30324522)
chr1 (137-208)||(25257349-25257419)
chr1 (116-167)||(33039819-33039870)
chr1 (147-208)||(28658707-28658768)
chr1 (116-208)||(38218592-38218682)
chr1 (20-108)||(28948608-28948696)
chr1 (116-167)||(41675848-41675899)
chr1 (137-208)||(28948512-28948583)
chr1 (137-208)||(6916167-6916238)
chr1 (117-208)||(32380897-32380989)
chr1 (137-208)||(36367483-36367554)
chr1 (137-208)||(37104382-37104453)
chr1 (137-208)||(38331181-38331252)
chr1 (162-208)||(3427613-3427659)
chr1 (174-208)||(34096392-34096426)
chr1 (174-208)||(34432254-34432288)
chr1 (175-208)||(10763899-10763932)
chr1 (137-208)||(8132914-8132985)
chr1 (116-144)||(34432325-34432353)
chr1 (137-208)||(52895006-52895077)
[»] scaffold0112 (1 HSPs)
scaffold0112 (20-208)||(41388-41571)
[»] scaffold0037 (2 HSPs)
scaffold0037 (20-108)||(27185-27273)
scaffold0037 (137-203)||(27095-27160)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-108)||(44005-44088)
[»] scaffold0177 (1 HSPs)
scaffold0177 (20-85)||(25041-25106)
[»] scaffold0640 (1 HSPs)
scaffold0640 (20-85)||(7579-7644)


Alignment Details
Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 24 - 207
Target Start/End: Complemental strand, 2567270 - 2567087
Alignment:
Q  24 taattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2567270 taattgagttagtagagttgtctttggatgaaccagatttggaagttggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgt 2567171  T
Q  124 taactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacac 207  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  2567170 taactaaaataacttaactcttgagtactgatgtgttcttttttcgatatagtgcttcctttttagatcgatatagtataacac 2567087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 52684441 - 52684628
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  52684441 ttgtaattgagttagtagagttgtctttggatgaaccaaatttggaagcagttttgtatcttgttgatggaaatggaggagaggagattgagacgattaa 52684540  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52684541 tgttaactaaaataactcaactattgagtactaatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtataacact 52684628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 21006367 - 21006180
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||| ||||||||||    
T  21006367 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctggtttgtatattgttgatggaaatggtggagaggagattgagacgattaa 21006268  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||||||||| || ||||   ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  21006267 tgttaaataaaataacttaactattgagtatcgatgtgttcttttttcgatataatgcttcttttttagatcgatatagtataacact 21006180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 30787470 - 30787378
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  30787470 attaatgttaactaaaataacttaactcttgagtactgatgtgttattttttggatatagtgcttcttttttggatcgatatagtatagcact 30787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 45057210 - 45057118
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | ||||| |||||| ||||||||||||| ||||||    
T  45057210 attaatgttaactaaaataacttaactcttgagtactaatgtgttcttttttggatataatgcttattttttggatcgatatagtacaacact 45057118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 47642215 - 47642307
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| || | ||||||||||||||||||||||||||||||    
T  47642215 attaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttgaatatagcgtttcttttttagatcgatatagtataacact 47642307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 13353104 - 13353012
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||| |||||| | |||||| ||||    
T  13353104 attaatgttaactaaaataacttaactcttgagtactgatgtgttctttttttgatatagtgcttcttttttggatcgacacagtatagcact 13353012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 28968720 - 28968812
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||  ||| |||| |||||||||||||||||||| |||||||||    
T  28968720 attaatgttaactaaaataacttaactcttgagtaatgatgtgttcttttttgaatatagtgtttcttttttagatcgatataatataacact 28968812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 19421625 - 19421717
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||| ||||||||||||||||| || ||| |||| ||||||||| |||| ||||||||||||||  |||||||||||||||||||    
T  19421625 attaatgttaaccaaaataacttaactcttgagcactgatgtattcttttttggatatagtgcttcttttttgaatcgatatagtataacact 19421717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 19879011 - 19878919
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| | || ||||||||| |||||||||| |||| ||||    
T  19879011 attaatgttaactaaaataacttaactcttgagtactgatgtgttctttttttgatataatgtttcttttttggatcgatataatatatcact 19878919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 7899627 - 7899536
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| |||||||||  ||| ||||||||||||||| ||||    
T  7899627 attaatgttaactaaaataacttaactcttgagtactgatgtgttctttttt-aatatagtgcttctcgtttggatcgatatagtatagcact 7899536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 10224638 - 10224550
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||| ||||||| |||||| ||||||||||| |||||    
T  10224638 gttggaattgagttagcagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgggaatggaggagaagagat 10224550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45532549 - 45532461
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||  ||||||||||||  ||| ||||||| |||||| |||||||||||||||||    
T  45532549 gttggaattgagttagcagagttgtctttggatgaacttgatttggaagctgatttgtatcttgatgatgggaatggaggagaggagat 45532461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 48123460 - 48123543
Alignment:
Q  25 aattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |  ||| ||||||| |||||  |||||||||||||||||    
T  48123460 aatttagttagtagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgagaatggaggagaggagat 48123543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 983395 - 983479
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagt 200  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||| |||| |||||||||  || ||||||||    
T  983395 attaatgttaactaaaacaacttaactcttgagtacttatgtgttcttttttggatatagtgtttcttttttgaatggatatagt 983479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1679168 - 1679080
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  1679168 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 1679080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 20510065 - 20509973
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| |||||||||||||||||||| | || | |||| ||||||| | |||| |||||||||||||| |||||| |||||||||||||    
T  20510065 attaatgttgactaaaataacttaactcttgaatagtgatgtattcttttatggatatagtgcttcttttttggatcgacatagtataacact 20509973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 21157638 - 21157545
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctt-ttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| |||||||||||||||||  |||| | |||||||||| |||| |||| |||||||||||||| ||| ||||||||||| ||||    
T  21157638 attaatgttaattaaaataacttaactctcgagtattgatgtgttctttttttggatatagtgcttctttttttgattgatatagtatagcact 21157545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 38888995 - 38888902
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtg-ttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| ||||||  |||| ||||||||| |||| ||||||| |||||| ||| |||| |||||| ||||    
T  38888995 attaatgttaactaaaataacttaactcttgagtactggtgtgtttcttttttggatatagtgcttattttttggattgataaagtatagcact 38888902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 28705368 - 28705456
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||||||||||||  ||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  28705368 gttggaattgagttagcagagttgtctttggatgaaccgtatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 28705456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 212715 - 212802
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtata 203  Q
    |||||||| ||||||||| | ||||||||| |||| | |||||||||||||| |||| | |||||||||||| |||||||| ||||||    
T  212715 attaatgtcaactaaaattatttaactcttgagtattgatgtgttcttttttggataaaatgcttctttttttgatcgataaagtata 212802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 22610650 - 22610580
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  22610650 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 22610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 25936452 - 25936382
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  25936452 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 25936382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 55268925 - 55268854
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttctttttt 187  Q
    ||||||||||||||||||||||||| |||| |||||| ||||||| |||||| |||| ||| ||||||||||    
T  55268925 attaatgttaactaaaataacttaagtcttgagtactgatgtgttattttttggatatagttcttctttttt 55268854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 25936565 - 25936496
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatg 89  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||||||  ||| ||||||| |||||    
T  25936565 gttggaattgagttagcagagttgtctttggatgaaccagatttagaagctgatttgtatcttgatgatg 25936496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 52505310 - 52505223
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||| ||| |||||| ||| |  ||| ||||||| |||||| |||||||||||||||||    
T  52505310 gttggaattgagttagcagagttgtctttggatg-accggatttgaaagttgatttgtatcttgatgatgggaatggaggagaggagat 52505223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 6134291 - 6134222
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttctttt 185  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||| |||| | |||| | ||||||||||    
T  6134291 attaatgttgactaaaataacttaactcttgagtactgatgtgtttttttatggatataatgcttctttt 6134222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 28548251 - 28548304
Alignment:
Q  114 cgattaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||| ||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  28548251 cgataaatgttaactaaaataacttaactcttgagtcttaatgtgttctttttt 28548304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 7327968 - 7328039
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||||||||    
T  7327968 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacact 7328039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 25700970 - 25701021
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||| ||||||    
T  25700970 attaatgtttactaaaataacttaactcttgagtacttatgtgttttttttt 25701021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 45532436 - 45532366
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| ||| |||||| |||| ||||    
T  45532436 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggattgatataatatagcact 45532366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 1679055 - 1678984
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  1679055 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 1678984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 37996665 - 37996594
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  37996665 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 37996594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 52505198 - 52505127
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| | || ||||||||| ||||||||||||||||||||    
T  52505198 ttaactctta-gtactgatgtgttctttttttggatataatgattcttttttggatcgatatagtataacact 52505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 2122918 - 2122952
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  2122918 attaatgttaactaaaataacttaactcttgagta 2122952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 29916001 - 29916035
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  29916001 attaatgttaactaaaataacttaactctttagta 29916035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 29916037 - 29916071
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| |||||||||||||||||||||||||    
T  29916037 agtgcttctgttttagatcgatatagtataacact 29916071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 29965154 - 29965188
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  29965154 attaatgttaactaaaataacttaactctttagta 29965188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 29965190 - 29965224
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| |||||||||||||||||||||||||    
T  29965190 agtgcttctgttttagatcgatatagtataacact 29965224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 35390125 - 35390162
Alignment:
Q  169 gatacagtgcttcttttttagatcgatatagtataaca 206  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  35390125 gatatagtgcttcttttttggatcgatatagtataaca 35390162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 5e-80; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 52721477 - 52721655
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52721477 agttagtagagttgtctttggatgaaccagatttgaaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 52721576  T
Q  130 aaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52721577 aaataacttaactcttgagtactgatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtataacact 52721655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 24784489 - 24784673
Alignment:
Q  24 taattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgt 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24784489 taattgagttagtaaagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatggaggagagaagattgagacgattaatgt 24784588  T
Q  124 taactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  24784589 taactaaaataacttaactcttgagtactgatgtgttcttttttcgatatagtgcttcttttttagattgatatagtatagcact 24784673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 39957802 - 39957989
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  39957802 ttgtaattgagctaatagagttgtctttggatgaaccagatttggaagctagtttgtatcttgttgatggaaatggaggagaggatattgagacgattaa 39957901  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||| |||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  39957902 tgttaactaaaataacttaattcttgaatactgatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtatagcact 39957989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 24823687 - 24823593
Alignment:
Q  114 cgattaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  24823687 cgattaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttcgatatagtgcttcttttttagattgatatagtatagcact 24823593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 24793640 - 24793548
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  24793640 attaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttaaatatagtgtttcttttttagatcgatatagtataacact 24793548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 116 - 206
Target Start/End: Complemental strand, 44521955 - 44521865
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataaca 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||| | |||||||||||| ||||||||||||||||||    
T  44521955 attaatgttaactaaaataacttaactcttgagtactaatgtgttcttttttgaatataatgcttcttttttggatcgatatagtataaca 44521865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 3109214 - 3109122
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  3109214 attaatgttaactaaaataacttaactcttgagtactgatgtgttattttttgaatatagtgtttcttttttagatcgatatagtataacact 3109122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 53322971 - 53323154
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||||||||  | ||| |||    
T  53322971 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagctaatttgtatcttgatgatgggaatggaggagaggagatgtaaacg-tta 53323069  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
      ||| |||        ||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  53323070 --gtt-acttgttagtgttaactctt-agtactgatgtgttcttttttggatacagtgcttcttttttggatcgatatagtatagcact 53323154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 17892457 - 17892549
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||  ||| |||| ||||||||||||| ||||||||||||||||    
T  17892457 attaatgttaacaaaaataacttaactcttgagtactgatgtgttcttttttgaatatagtgtttcttttttagattgatatagtataacact 17892549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 36943878 - 36943966
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataa 204  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||  ||| |||| ||||||||||||||||||||||||||    
T  36943878 attaatgttaactaaaataacttaactcttgagtagtgatgtgttcttttttgaatatagtgtttcttttttagatcgatatagtataa 36943966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 31226969 - 31227057
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  31226969 gttggaattgagttagcagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 31227057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 55901057 - 55900965
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||| | ||||||| |||||||||||| |||||| |||||||||||| | |||| | |||||||||||| ||||||||||||||||||||    
T  55901057 attaatggtgactaaaaaaacttaactcttgagtactgatgtgttcttttatggatataatgcttcttttttggatcgatatagtataacact 55900965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 52572826 - 52572909
Alignment:
Q  25 aattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||  ||| ||||||| |||||| |||||||||||| ||||    
T  52572826 aattgagttagcagagttgtctttggatgaaccatatttggaagctgatttgtatcttgatgatgggaatggaggagagtagat 52572909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 41146236 - 41146419
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| |||||||||||||||||| || ||||||||||||  ||| ||||||| | |||| |||||||||||||||||  | ||| |||    
T  41146236 gttggaattgagttagcagagttgtctttggatgatccggatttggaagctgatttgtatcttgattatgggaatggaggagaggagatgtaaacg-tta 41146334  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
      ||| |||        ||||||||| |||||| |||||||||||||| |||| ||||||||||||||  |||||||||||||||||||    
T  41146335 --gtt-acttgttagtgttaactctt-agtactgatgtgttcttttttggatatagtgcttcttttttgaatcgatatagtataacact 41146419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 8063584 - 8063496
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  8063584 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 8063496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 46431842 - 46431751
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| | | |||| ||||| |||||||| |||||| ||||    
T  46431842 attaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttggatatactacttc-tttttggatcgataaagtatagcact 46431751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 14795643 - 14795726
Alignment:
Q  25 aattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||| ||||||||||||    
T  14795643 aattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatgaaggagaggagat 14795726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 3403061 - 3402973
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| | ||||||| ||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  3403061 gttggaattgagttagcaaagttgtccttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 3402973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 722538 - 722447
Alignment:
Q  117 ttaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||| |||||||||||||  ||| | ||||||| ||||||  ||| |||| ||||||||| ||| |||||||||| |||||    
T  722538 ttaatgttaactaaactaacttaactcttgtgtattgatgtgttattttttgaatatagtgtttcttttttggatagatatagtatgacact 722447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 754380 - 754471
Alignment:
Q  117 ttaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||| |||||||||||||  ||| | ||||||| ||||||  ||| |||| ||||||||| ||| |||||||||| |||||    
T  754380 ttaatgttaactaaactaacttaactcttgtgtattgatgtgttattttttgaatatagtgtttcttttttggatagatatagtatgacact 754471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 2586545 - 2586596
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  2586545 attaatgttaactaaaataacttaactcttcaggactgatgtgttctttttt 2586596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 42630393 - 42630342
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  42630393 attaatgttaactaaaataactgaactcttcagtacttatgtgttctttttt 42630342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 49470489 - 49470530
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgt 157  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  49470489 attaatgttaactaaaataacttaactcttgagtactcatgt 49470530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 3402948 - 3402877
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  3402948 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 3402877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 8063471 - 8063400
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  8063471 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 8063400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 37992436 - 37992394
Alignment:
Q  123 ttaactaaaataacttaactcttaagtactaatgtgttctttt 165  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  37992436 ttaactaaaataacttaactcttgagtaccgatgtgttctttt 37992394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 51859004 - 51859038
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  51859004 attaatgttaactaaaataacttaactcttgagta 51859038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 52122426 - 52122361
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgtt 85  Q
    |||| ||||||||||| | ||||||||||| ||||||| |||| |||||||  ||| |||||||||    
T  52122426 gttggaattgagttagcatagttgtctttgaatgaaccggattaggaagctgatttgtatcttgtt 52122361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 51859042 - 51859074
Alignment:
Q  176 tgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||| ||||||||||||||||||||    
T  51859042 tgcttcttttttggatcgatatagtataacact 51859074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 3212692 - 3212870
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3212692 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 3212791  T
Q  130 aaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  3212792 aaataacttaactcttgagtactgatgtgttctttttttgatatagtgcttattttttagatcgatatagtataacact 3212870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 32018218 - 32018397
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||| || |||| ||| |||           
T  32018218 ttgtaattgagttagtagagttgtctttggatgaaccaaatttggaagctggtttgtatcttattgatggaaatggaagataggaaattgaga------- 32018310  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  32018311 tgttaactaaaataacttaactcttgagtacta-tgtgttcttttttcgatatagtgtttcttttttagattgatatagtataacact 32018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 7255130 - 7255220
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataaca 206  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||| ||||||||||||||||||    
T  7255130 attaatgttaacttaaataacttaactcttgagtactgatgtgttatttttttgatatagtgcttcttttttggatcgatatagtataaca 7255220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 22989114 - 22988964
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||  |||||||||||| ||||| |||| ||||    
T  22989114 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgtgaatggaggagagaagattgagacaatta 22989015  T
Q  120 a---tgttaactaaaataac-ttaactcttaagtactaatgtgttctttttt 167  Q
    |   |||||||||||||||| ||||||||| || ||  ||||||||||||||    
T  22989014 atattgttaactaaaataactttaactcttgagaac-gatgtgttctttttt 22988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 23799282 - 23799432
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||  |||||||||||| ||||| |||| ||||    
T  23799282 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgtgaatggaggagagaagattgagacaatta 23799381  T
Q  120 a---tgttaactaaaataac-ttaactcttaagtactaatgtgttctttttt 167  Q
    |   |||||||||||||||| ||||||||| || ||  ||||||||||||||    
T  23799382 atattgttaactaaaataactttaactcttgagaac-gatgtgttctttttt 23799432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 8357511 - 8357600
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagatt 109  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| ||||||||||||||||||    
T  8357511 gttggaattgagttagcagagttgtctttggatgaacctgatttggaagcttatttgtatcttgatgatggtaatggaggagaggagatt 8357600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 7188267 - 7188179
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  7188267 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 7188179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 10894428 - 10894336
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||| ||||||||||  |||| | ||||||||||| || |||| |||||||||||||| ||||||||||||||| ||||    
T  10894428 attaatgttaactaaaattacttaactctcgagtattgatgtgttctttgttggatatagtgcttcttttttggatcgatatagtatagcact 10894336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1036303 - 1036215
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  1036303 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 1036215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 6707950 - 6707857
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttctt-ttttagatcgatatagtataacact 208  Q
    ||||||||| |||||||||||||||||||| |||| | |||||||||||| | |||| | |||||||| |||| |||| |||||||||||||||    
T  6707950 attaatgttgactaaaataacttaactcttgagtattgatgtgttcttttatggatataatgcttctttttttggatcaatatagtataacact 6707857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 13061283 - 13061191
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| |||||||||||||||||| | || |||| | ||||||| |||||| |||| || ||||||||||| ||||||||||||||| ||||    
T  13061283 attaatattaactaaaataacttaatttttgagtattgatgtgttattttttggatatagcgcttcttttttggatcgatatagtatagcact 13061191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 31079813 - 31079889
Alignment:
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatat 197  Q
    |||||||||||||||||||| |||| | |||| |||||||||||||| |||| |||| ||||||||| ||| |||||    
T  31079813 tgttaactaaaataacttaaatcttgaatactgatgtgttcttttttggatatagtgtttcttttttggattgatat 31079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 11105495 - 11105588
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcga-tacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| |||||||| |||| |||| |||| | || |||||||||||  | |||||||||||| |||| ||| ||||||||||||||||    
T  11105495 attaatgttaaataaaataaattaattcttgagtattgatatgttcttttttttaatacagtgcttctcttttggattgatatagtataacact 11105588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 26327524 - 26327596
Alignment:
Q  136 cttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||  |||||  |||||||||||| | |||| |||||||||||||| |||| |||||||||||||||    
T  26327524 cttaactctggagtaccgatgtgttcttttatggatatagtgcttcttttttggatcaatatagtataacact 26327596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 8357624 - 8357689
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtata 203  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| |||| ||||| ||||    
T  8357624 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggatcaatataatata 8357689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 1036190 - 1036119
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  1036190 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 1036119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 13045285 - 13045198
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||| ||||||||||||||||||||| |||||     |||| |||||| |||| ||   ||||||||| ||| ||||||||||||||||    
T  13045285 attaatgtcaactaaaataacttaactcttgagtac-----tgttattttttggatatagcatttcttttttggattgatatagtataacact 13045198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 13607694 - 13607643
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    ||||||||||||||||||||||||| |||| |||| | ||||||| ||||||    
T  13607694 attaatgttaactaaaataacttaattcttgagtattgatgtgttttttttt 13607643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 7188154 - 7188082
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttc--gatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| ||||||||||||||   |||| |||| ||||||||| ||||||||||||||| ||||    
T  7188154 ttaactctta-gtactgatgtgttcttttttttggatatagtgattcttttttggatcgatatagtatagcact 7188082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 27084183 - 27084217
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  27084183 attaatgttaactaaaataacttaactcttgagta 27084217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 31195725 - 31195654
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| |||||  ||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  31195725 ttaactctta-gtactgttgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 31195654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 8171110 - 8170923
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  8171110 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctgctttgtatcttgttgatggaaatagaggagaggagattgagacgattaa 8171011  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| |||||| || || ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  8171010 tgttaactaaaataacttaactcttgagtactgatatgctcttttttcgatatagtgcttcttttttagatcgatatagtatagcact 8170923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 40412657 - 40412844
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| |||    
T  40412657 ttgtaattgagttagtagagttatctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatgaaggagaggagattgagacgactaa 40412756  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||||||||||||||||||| ||||    
T  40412757 tgttaactaaaataacttaactcttgagtactgatgtgttctttttttgatatagtgctttttttttagatcgatatagtatagcact 40412844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 27109102 - 27109012
Alignment:
Q  118 taatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  27109102 taatgttaactaaaataacttaactgttaagtaccgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtataacact 27109012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 37669199 - 37669287
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||||||||    
T  37669199 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagat 37669287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 36484054 - 36484142
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||||||||    
T  36484054 gttggaattgagttggcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagat 36484142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 43771203 - 43771115
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  43771203 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 43771115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45216709 - 45216621
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  45216709 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagtttatttgtatcttgatgatgggaatggaggagaggagat 45216621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 12580024 - 12579841
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| |||||||| || |||| |||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||||||||  | ||| |||    
T  12580024 gttggaattgagtcagcagagctgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagatgtaaacg-tta 12579926  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
      ||| |||        ||||||||| |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  12579925 --gtt-acttgttagtgttaactctt-agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 12579841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 4246558 - 4246646
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  4246558 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 4246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 5540051 - 5540139
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||| ||||||||||||    
T  5540051 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatggtaatgaaggagaggagat 5540139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 7411811 - 7411903
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| || ||  ||||||||||||||  | | |||||||  ||||| ||||||||||||||||||||    
T  7411811 attaatgttaactaaaataacttaactcttgagaaccgatgtgttcttttttgaacatagtgctttctttttggatcgatatagtataacact 7411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 34900858 - 34900770
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  34900858 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 34900770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 28876054 - 28875966
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||| |||||| |||||||||||| |  ||| ||||||| | |||| |||||||||||||||||    
T  28876054 gttggaattgagttagcagagttgtctttagatgaatcagatttggaagttgatttgtatcttgataatgggaatggaggagaggagat 28875966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 32760098 - 32760168
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  32760098 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 32760168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 32425130 - 32425215
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |       |||||||||||||  ||| |||| ||||||||||||| ||||||||||||||||    
T  32425130 attaatgttaactaaaataacttaactcttga-------tgtgttcttttttgaatatagtgtttcttttttagattgatatagtataacact 32425215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 36484176 - 36484237
Alignment:
Q  147 agtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  36484176 agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 36484237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 38388876 - 38388968
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| ||||||| |||||||||||  |||||| |||||||||||| | |||  || | |||||||||  |||||||||||||||||||    
T  38388876 attaatgttgactaaaaaaacttaactctcgagtactgatgtgttcttttatggatgtagagtttcttttttgaatcgatatagtataacact 38388968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 32638589 - 32638519
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| ||||||||| ||||| ||||    
T  32638589 ttaactctta-gtactcatgtgttcttttttggatatagtgcttcttttttggatcgatattgtatagcact 32638519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 29355836 - 29355919
Alignment:
Q  119 aatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| ||||||||||||||| |      |||||||||||||| |||| ||||||||||||||  ||  |||||||||||||||    
T  29355836 aatgttaactacaataacttaactcttca------atgtgttcttttttggatatagtgcttcttttttttattaatatagtataacact 29355919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 4246671 - 4246742
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  4246671 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 4246742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 28875941 - 28875870
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  28875941 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 28875870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 34900745 - 34900674
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  34900745 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 34900674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 45216596 - 45216525
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| | || ||||||||| ||||||||||||||||||||    
T  45216596 ttaactctta-gtactgatgtgttctttttttggatataatgattcttttttggatcgatatagtataacact 45216525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 22201194 - 22201128
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtata 203  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| |||||||||||||||    
T  22201194 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtata 22201128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 37669312 - 37669382
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||| | |||||||||||||| |||| |||||||||||||| |||| ||||| |||| ||||    
T  37669312 ttaactctta-gtattgatgtgttcttttttggatatagtgcttcttttttggatcaatataatatagcact 37669382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 3892173 - 3892207
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  3892173 attaatgttaactaaaataacttaactcttgagta 3892207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 5818240 - 5818206
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  5818240 attaatgttaactaaaataacttaactcttgagta 5818206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 43771055 - 43771009
Alignment:
Q  162 ttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| |||| |||| ||||||||| ||||||||||||||||||||    
T  43771055 ttttttggatatagtgattcttttttggatcgatatagtataacact 43771009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 19947718 - 19947681
Alignment:
Q  169 gatacagtgcttcttttttagatcgatatagtataaca 206  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  19947718 gatatagtgcttcttttttggatcgatatagtataaca 19947681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 5540164 - 5540235
Alignment:
Q  137 ttaactcttaagtactaatgtgttc-ttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||| |||||| |||| |||| ||||||||| |||||||||| |||| ||||    
T  5540164 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatataatatagcact 5540235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 45159180 - 45158993
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  45159180 ttgtaattgagttagtagaattgtctttggatgaaccagatttggaagttggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaa 45159081  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||| | ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  45159080 tgttaactaaaataattcaactcttcagtacttatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtatagcact 45158993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 31236092 - 31236003
Alignment:
Q  119 aatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  31236092 aatgttaactaaaataacttaactcttcagtactgatgtgtttttttttggatatagtgcttcttttttagatcgatatagtataacact 31236003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 4170009 - 4169920
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagatt 109  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  4170009 gttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgtatcttgatgatggaaatggaggagaggagatt 4169920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 35342527 - 35342618
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  35342527 attaatgttaactaaaataacttaactcttgattactgatgtgttctttttt-aatatagtgtttcttttttagatcgatatagtataacact 35342618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 6497159 - 6497071
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||||||||    
T  6497159 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagat 6497071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 6124796 - 6124884
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  6124796 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 6124884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 10573703 - 10573795
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||| |||||||||||||| || |||| | |||||||||||||| |||| ||||||| |||||| |||||||| |||||||||||    
T  10573703 attaatgttaaccaaaataacttaactattgagtagtgatgtgttcttttttggatatagtgcttattttttggatcgataaagtataacact 10573795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 22484898 - 22484986
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  22484898 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 22484986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 40308325 - 40308237
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  40308325 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 40308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 2319484 - 2319576
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||||| || |||||| |||  || |||| | |||| |||||||||||||| ||| ||||||||||||||||    
T  2319484 attaatgttaactaaaataacttaactattgagtactgatgcatttttttatggatatagtgcttcttttttggattgatatagtataacact 2319576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 34146389 - 34146481
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||| ||||||||| |||| | || ||||||||||| |||| | ||||| |||||||||| ||||||||||| ||||    
T  34146389 attaatgttaactaaaataatttaactcttgagtattgatttgttcttttttggatataatgcttattttttagattgatatagtatagcact 34146481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 3545489 - 3545398
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| ||||||||||||| |||| |||||| |||||||||||||| |||| ||||||| ||| ||  |||||||||||||| ||||    
T  3545489 attaatgttaattaaaataacttaattcttgagtactgatgtgttcttttttggatatagtgctt-tttattttatcgatatagtatagcact 3545398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 6497046 - 6496981
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtata 203  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  6497046 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtata 6496981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 21104691 - 21104784
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||||| || |||| | |||||| ||||||| | ||| |||||||| |||||  |||||||||||||| ||||    
T  21104691 attaatgttaactaaaataacttaacttttgagtattgatgtgtactttttttgaatatagtgcttcatttttgtatcgatatagtatatcact 21104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 7807231 - 7807160
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||||||||    
T  7807231 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacact 7807160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 4169896 - 4169825
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| | |||||| ||||| ||||||||||||||||||||    
T  4169896 ttaactctta-gtactgatgtgttctttttttggatataatgcttcatttttggatcgatatagtataacact 4169825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 22485011 - 22485082
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  22485011 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 22485082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 40308212 - 40308141
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  40308212 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 40308141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 9293314 - 9293365
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||||||||||||||||||||| |||| || |||||  ||||||||||||||    
T  9293314 attaatgttaactaaaataactcaactattgagtaccgatgtgttctttttt 9293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 4355557 - 4355591
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||| ||||||||||||||||||||    
T  4355557 agtgcttcttttttggatcgatatagtataacact 4355591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 44156807 - 44156841
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  44156807 attaatgttaactaaaataacttaactcttgagta 44156841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 4355521 - 4355550
Alignment:
Q  116 attaatgttaactaaaataacttaactctt 145  Q
    ||||||||||||||||||||||||||||||    
T  4355521 attaatgttaactaaaataacttaactctt 4355550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 5588247 - 5588276
Alignment:
Q  116 attaatgttaactaaaataacttaactctt 145  Q
    ||||||||||||||||||||||||||||||    
T  5588247 attaatgttaactaaaataacttaactctt 5588276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 9283856 - 9283678
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9283856 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 9283757  T
Q  130 aaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||| |||| | |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  9283756 aaataatttaactcttgagtaattatgtgttctttttttgatatagtgcttattttttagatcgatatagtataacact 9283678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 25969627 - 25969805
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25969627 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 25969726  T
Q  130 aaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||| |||| | |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  25969727 aaataatttaactcttgagtaattatgtgttctttttttgatatagtgcttattttttagatcgatatagtataacact 25969805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 9250304 - 9250128
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9250304 agttagtagagttg-ctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 9250206  T
Q  130 aaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||| |||| | ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  9250205 aaataatttaactcttgagtaattatgtg-tctttttttgatatagtgcttattttttagatcgatatagtataacact 9250128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 47720083 - 47719952
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47720083 agttagtagagttgtctttggatgagccagatttggaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 47719984  T
Q  130 aaataacttaactcttaagtactaatgtgttc 161  Q
    |||||||||||||||| |||||| ||||||||    
T  47719983 aaataacttaactcttgagtactgatgtgttc 47719952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 11058558 - 11058744
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||| ||||||| ||||| |||| ||||    
T  11058558 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatgaaggagagaagattgagacaatta 11058657  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| |||| ||| ||  |||||| |||||||||| | |||||||    
T  11058658 atgttaactaaaataacttaactcttgtgtactgatgtgttcttttttggatatagttct--ttttttggatcgatataatgtaacact 11058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 23079018 - 23078926
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  23079018 attaatgttaattaaaataacttaactcttaagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 23078926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 1400177 - 1400085
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||| ||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  1400177 attaatgttaattaaaataacttaactcttaagtattgatgtgttattttttgaatatagtgtttcttttttagatcgatatagtataacact 1400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 15878333 - 15878241
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||||||||||||||||| |||| | ||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  15878333 attaatattaactaaaataacttaactcttgagtattgatgtgttctttttttaatatagtgtttcttttttagatcgatatagtataacact 15878241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 33454276 - 33454368
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| ||||||| |||||||||||| |||||| |||||||||||| | |||| |||||||||||||| ||||||||||||||||||||    
T  33454276 attaatgttgactaaaaaaacttaactcttgagtacttatgtgttcttttatggatatagtgcttcttttttggatcgatatagtataacact 33454368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 36661095 - 36661278
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||| ||||||||||||  | ||| |||    
T  36661095 gttggaattgagttagaagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatgcaggagaggagatgtaaacg-tta 36661193  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
      ||| |||        ||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  36661194 --gtt-acttgttagtgttaactctt-agtactgatgtgttcttttttggatacagtgcttcttttttggatcgataaagtataacact 36661278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 36763705 - 36763612
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttc-ttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||| | |||||| |||| ||||| |||||||| ||||||||||||||||||||    
T  36763705 attaatgttaactaaaataacttaactcttgagtactgatgtgtcctttttttggatatagtgcctcttttttggatcgatatagtataacact 36763612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 11830319 - 11830407
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||  ||| ||||||| |||||| |||||||||||||||||    
T  11830319 gttggaattgagttagcagagttgtctttggatgaaccagatttgaaagctgatttgtatcttgatgatgggaatggaggagaggagat 11830407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 36757925 - 36757833
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||  ||||||  ||| ||||||| |||||| ||||||||||||||||||||    
T  36757925 attaatgttaactaaaataacttaactcttgagtactgatgtgtcattttttgtatatagtgcttattttttggatcgatatagtataacact 36757833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 36767449 - 36767357
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||||  ||||||  ||| ||||||| |||||| ||||||||||||||||||||    
T  36767449 attaatgttaactaaaataacttaactcttgagtactgatgtgtcattttttgtatatagtgcttattttttggatcgatatagtataacact 36767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 35160070 - 35160160
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||||||||| |||  |||||||||||||| ||||||||||||||| ||||    
T  35160070 attaatgttaattaaaataatttaactcttgagtactgatgtgttcttttttagat--agtgcttcttttttggatcgatatagtatagcact 35160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 27397604 - 27397516
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| |||||  ||| ||||||| |||||| |||||||||||||||||    
T  27397604 gttggaattgagttagcagagttgtctttggatgaaccggatttgaaagctaatttgtatcttgatgatgggaatggaggagaggagat 27397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 21180044 - 21180122
Alignment:
Q  118 taatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgata 196  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||| ||||||||    
T  21180044 taatgataactaaaataacttaactcttgagtactgatgtgttcttttttggatatagtgcttattttttggatcgata 21180122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 40096288 - 40096376
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  40096288 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 40096376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 40041584 - 40041655
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttctttttt 187  Q
    |||||||||||||||||||| |||||| || |||||| |||||||||||||| |||| | ||||||||||||    
T  40041584 attaatgttaactaaaataatttaactattgagtactgatgtgttcttttttagatataatgcttctttttt 40041655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 44960044 - 44959993
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  44960044 attaatgttaactaaaataacttaactcttgagtactgatgtgttctttttt 44959993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 27555221 - 27555150
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||||||||    
T  27555221 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacact 27555150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 47238116 - 47238060
Alignment:
Q  147 agtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtata 203  Q
    |||||| |||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  47238116 agtactgatgtgttcttttttggatatagtgcttcttttttgaatcgatatagtata 47238060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 11830432 - 11830502
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| | |||||||||||| |||| | |||||||||||| ||||||||||||||| ||||    
T  11830432 ttaactctta-gtactgacgtgttcttttttggatataatgcttcttttttggatcgatatagtatagcact 11830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 16851046 - 16851117
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  16851046 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 16851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 48163671 - 48163742
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  48163671 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 48163742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 1042924 - 1042885
Alignment:
Q  169 gatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  1042924 gatatagtgcttcttttttggatcgatatagtataacact 1042885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 38064881 - 38064969
Alignment:
Q  125 aactaaaataacttaactcttaagtactaatgtgttcttt----tttcgatacagtgcttc-ttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||| || |||||||||||||| |||    | | |||| |||||||| |||||| |||||||||| |||||||||    
T  38064881 aactaaaataacttaacttttgagtactaatgtgtttttttgtgtgtggatatagtgcttctttttttggatcgatataatataacact 38064969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 554763 - 554729
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||| ||||||||||||||||||||    
T  554763 agtgcttcttttttggatcgatatagtataacact 554729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 21409596 - 21409630
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  21409596 attaatgttaactaaaataacttaactcttgagta 21409630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 24956457 - 24956491
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  24956457 attaatgttaactaaaataacttaactcttgagta 24956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 27354184 - 27354255
Alignment:
Q  137 ttaactcttaagtactaatgtgttc-ttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||| |||||| |||| |||| ||||||||| |||||||||| |||| ||||    
T  27354184 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatataatatagcact 27354255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 40096401 - 40096472
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| || |||||| ||||||||||||||| ||||    
T  40096401 ttaactctta-gtactgatgtgttctttttttggatatagtgatttttttttggatcgatatagtatatcact 40096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 7e-73; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 30 - 208
Target Start/End: Complemental strand, 30777405 - 30777227
Alignment:
Q  30 agttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaacta 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30777405 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatggaaatggaggagaggagattgagacgattaatgttaacta 30777306  T
Q  130 aaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||| |||| | |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  30777305 aaataatttaactcttgagtaattatgtgttctttttttgatatagtgcttattttttagatcgatatagtataacact 30777227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 6243047 - 6242901
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||||||||||||||||||||| ||||||||||    
T  6243047 ttgtaattgagttagtagagttgtctttggatgaaccagattttgaagctggtgtgtatcttgttgatggaaatggaggagaggagattgagacgattaa 6242948  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||||||||||| || ||||||||||| |||| ||||||||||||||    
T  6242947 tgttaactaaaacaatttaactcttaaatactgatgtgttctttttt 6242901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 11907405 - 11907591
Alignment:
Q  21 ttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaa 120  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| |||||  ||| ||||||| ||| || |||||||||||||||||| ||||||||||    
T  11907405 ttgtaattgagttactagagttttctttggatgaaccacatttgaaagctgatttgtatcttgatgacgggaatggaggagaggagattgagacgattaa 11907504  T
Q  121 tgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacac 207  Q
    ||||||||||||||||||||||| | |||||| |||| ||||||||| |||| |||||||||||||| |||||||||| ||||||||    
T  11907505 tgttaactaaaataacttaactcctgagtactgatgtattctttttttgatatagtgcttcttttttggatcgatatattataacac 11907591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 27085558 - 27085650
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||| |||||||||| |||| ||||    
T  27085558 attaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatataatatagcact 27085650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 9729613 - 9729489
Alignment:
Q  44 tctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgttaactaaaataacttaactc 143  Q
    ||||||||||||||  ||||||||| |  ||| ||||||| |||  | |||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  9729613 tctttggatgaaccgtatttggaagttgatttgtatcttgatgaccggaatggaggagaggagattgagacaattaatattaactaaaataacttaactc 9729514  T
Q  144 -ttaagtactaatgtgttctttttt 167  Q
     ||||||||||||||||| ||||||    
T  9729513 tttaagtactaatgtgttttttttt 9729489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 17138163 - 17138071
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||| |||| |||||||||||||| ||| |||||| |||| ||||    
T  17138163 attaatgttaactaaaataacttaactcttgagtattgatgtgttcttttttggatatagtgcttcttttttggattgatataatatagcact 17138071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 22738047 - 22738138
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  22738047 attaatgttaactaaaataatttaactcttgagcactgatgtgttc-tttttggatatagtgcttcttttttggatcgatatagtataacact 22738138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1639276 - 1639188
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||| |||||  ||| ||||||| |||||| |||||||||||||||||    
T  1639276 gttggaattgagttagcagagttgtctttggatgaaccggatttgcaagctgatttgtatcttgatgatgggaatggaggagaggagat 1639188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 5722186 - 5722278
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| ||||||| |||||||||||| |||||| |||||||||||| | |||| ||||||||||||||  |||||||||| ||||||||    
T  5722186 attaatgttgactaaaaaaacttaactcttgagtacttatgtgttcttttatggatatagtgcttcttttttgaatcgatataggataacact 5722278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 18001875 - 18001783
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| | || |||||| ||||||||||||||  ||| |||||||||||||| |||||||| |||||| ||||    
T  18001875 attaatgttaactaaaataacttaattattgagtactgatgtgttcttttttgaatatagtgcttcttttttggatcgataaagtatagcact 18001783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 26794480 - 26794392
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||| ||||||| |||||| ||||||||||| |||||    
T  26794480 gttggaattgagttagcagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgggaatggaggagaagagat 26794392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 34032571 - 34032663
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||  ||| ||||||| |||||| |||||||| |||||| ||||    
T  34032571 attaatgttaactaaaataatttaacttttgagtactaatgtgttctttttttaatatagtgcttattttttggatcgataaagtatagcact 34032663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 41233515 - 41233586
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttctttttt 187  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| ||| ||||||||||    
T  41233515 attaatgttaactaaaataacttaactgttgagtactaatgtgttcttttttggatatagtccttctttttt 41233586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 26691825 - 26691918
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgtt-cttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| | || |||||| |||||||  |||||| |||| |||||||||||||| |||||||| |||||||||||    
T  26691825 attaatgttaactaaaataacttaagttttgagtactgatgtgttatttttttggatatagtgcttcttttttggatcgatagagtataacact 26691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 26961557 - 26961650
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgtt-cttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||| | || |||||| |||||||  |||||| |||| |||||||||||||| |||||||| |||||||||||    
T  26961557 attaatgttaactaaaataacttaagttttgagtactgatgtgttatttttttggatatagtgcttcttttttggatcgatagagtataacact 26961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 30284514 - 30284424
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||| | |||| | ||||||||||||||  ||| ||||||  |||||| ||||||||||||||||||||    
T  30284514 attaatgttaactaaaataacttaactcctgagtagtgatgtgttcttttttgaatatagtgct--ttttttggatcgatatagtataacact 30284424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 12852741 - 12852829
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| | ||||||||||||||||||  |||||||||| |  ||| ||||||| ||||||||||||||||||||||||    
T  12852741 gttggaattgagttagcatagttgtctttggatgaactggatttggaagttgatttgtatcttgatgatggaaatggaggagaggagat 12852829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 5612351 - 5612258
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctt-ttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||| |||||||||||||||||  |||| | |||||||||| |||| |||| |||||||||||||| ||| ||||||||||| ||||    
T  5612351 attaatgttaattaaaataacttaactctcgagtattgatgtgttctttttttggatatagtgcttctttttttgattgatatagtatagcact 5612258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 9792927 - 9793015
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||  |||||||||||||||||    
T  9792927 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgagaatggaggagaggagat 9793015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 33830392 - 33830480
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||| ||| |  ||| ||||||| |||||| |||||||||||||||||    
T  33830392 gttggaattgagttagcagagctgtctttggatgaaccggatttgaaagttgatttgtatcttgatgatgggaatggaggagaggagat 33830480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 39690218 - 39690130
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||| | |||||||||| |  ||| ||||||| |||||  |||||| ||||||||||    
T  39690218 gttggaattgagttagcagagttgtctttggatgaatcggatttggaagttgatttgtatcttgatgatgagaatggatgagaggagat 39690130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 3701319 - 3701365
Alignment:
Q  162 ttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  3701319 ttttttggatacagtgcttcttttttggatcgatatagtataacact 3701365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 39690105 - 39690034
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||||||||    
T  39690105 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacact 39690034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 1639163 - 1639093
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||  |||| |||||||||||||| |||||||||| |||| ||||    
T  1639163 ttaactctta-gtactgatgtgttctttttaggatatagtgcttcttttttggatcgatataatatagcact 1639093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 9793040 - 9793111
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  9793040 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 9793111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 11694412 - 11694461
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  11694412 attaatgttaa-taaaataacttaactctt-agtactgatgtgttctttttt 11694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 3934696 - 3934662
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagta 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  3934696 attaatgttaactaaaataacttaactcttgagta 3934662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 35746194 - 35746160
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    |||| ||||||||||||||||||||||||||||||    
T  35746194 agtgtttcttttttagatcgatatagtataacact 35746160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 32707388 - 32707323
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgtt 85  Q
    |||| ||||||||||| | ||||||||||| ||||||| |||| |||||||  ||| |||||||||    
T  32707388 gttggaattgagttagcatagttgtctttgaatgaaccggattaggaagctgatttgtatcttgtt 32707323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 33830505 - 33830575
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| || |||||| ||||||||||||||||||||    
T  33830505 ttaactctta-gtactgatgtgttctttttttggatatagtgatt-ttttttggatcgatatagtataacact 33830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 36551593 - 36551685
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  36551593 attaatgttaactaaaataacttaactcttgagtagtgatgtgttcttttttgaatatagtgtttcttttttagatcgatatagtataacact 36551685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 24851679 - 24851771
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||| |||| |||| ||||||||| ||||||||||||||| ||||    
T  24851679 attaatgttaactaaaataacttaactcttgagtaatgatgtgttctttttttgatatagtgattcttttttggatcgatatagtatagcact 24851771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 24590033 - 24589940
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtg-ttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||||  ||| |||| ||||||||| ||||||||||||||||||||    
T  24590033 attaatgttaactaaaataacttaactcttgagtactgatgtgcttcttttttgaatatagtgtttcttttttggatcgatatagtataacact 24589940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 2472832 - 2472740
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||| |||||||||||||  |||||||| |||||| ||||    
T  2472832 attaatgttaactaaaataacttaactcttgagtacgaatgtgttattttttggatatagtgcttctttttctgatcgataaagtatagcact 2472740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 47654873 - 47654965
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||||||||   |||| |||||||||||||| ||||||||||||||||||||    
T  47654873 attaatgttgactaaaaaaacttaactcttgagtactgatgtgttcttttacggatatagtgcttcttttttggatcgatatagtataacact 47654965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 3427469 - 3427557
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  3427469 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagat 3427557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 6916351 - 6916263
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  6916351 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 6916263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 8132801 - 8132889
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  8132801 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 8132889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 38331068 - 38331156
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  38331068 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 38331156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 52895190 - 52895102
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||| |  | | ||||||| |||||| |||||||||||||||||    
T  52895190 gttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagat 52895102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 25257237 - 25257320
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagag 103  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||||| |||||    
T  25257237 gttggaattgagttagaagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaagagag 25257320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 3708185 - 3708103
Alignment:
Q  126 actaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||| |||||  |||||||||||||| |||| | |||||||||||| |||||||| |||||| ||||    
T  3708185 actaaaataacttaactcttgagtaccgatgtgttcttttttagatataatgcttcttttttggatcgataaagtatagcact 3708103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 5984806 - 5984989
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| ||||||||||||||||||||   |||||||||||  ||| ||||||  |||||| |||||||||||||||||  | ||| |||    
T  5984806 gttggaattgagttagcagagttgtctttggatgaactgaatttggaagctgatttgtatcttaatgatgggaatggaggagaggagatgtaaacg-tta 5984904  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
      ||| |||        ||||||||| |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  5984905 --gtt-acttgttagtgttaactctt-agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 5984989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 208
Target Start/End: Original strand, 30324344 - 30324522
Alignment:
Q  25 aattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgattaatgtt 124  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||| | |||||  |||||||||||||||||  | ||| |||  |||    
T  30324344 aattgagttagcagagttgtctttggatgaaccggatttggaaggtgatttgtatctcgatgatgagaatggaggagaggagatataaacg-tta--gtt 30324440  T
Q  125 aactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
     |||        ||||||||| |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  30324441 -acttgttagtgttaactctt-agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 30324522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 25257349 - 25257419
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  25257349 ttaactctta-gtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcact 25257419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 33039819 - 33039870
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  33039819 attaatgttaactaaaataacttaactcttgagtactgatgtgttctttttt 33039870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 28658768 - 28658707
Alignment:
Q  147 agtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  28658768 agtactgatgtgttctttttttgatatagtgcttcttttttggatcgatatagtatagcact 28658707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 38218592 - 38218682
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| ||| ||||||||||||||||||| |||| | ||||||||||||||  ||| ||||  | ||||||||||||||||| |||||||||    
T  38218592 attaatattagctaaaataacttaactcttgagtattgatgtgttctttttttaatatagtg--ttttttttagatcgatataatataacact 38218682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 28948696 - 28948608
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| ||||||||||||||||||| | |||||||||| |  ||| ||||||| |||||  |||||| ||||||||||    
T  28948696 gttggaattgagttagcagagttgtctttggatgaatcggatttggaagttgatttgtatcttgatgatgagaatggatgagaggagat 28948608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 41675899 - 41675848
Alignment:
Q  116 attaatgttaactaaaataacttaactcttaagtactaatgtgttctttttt 167  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  41675899 attaatgttaattaaaataacttaactcttgagtactgatgtgttctttttt 41675848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 28948583 - 28948512
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||||||||    
T  28948583 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacact 28948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 6916238 - 6916167
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  6916238 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 6916167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 32380989 - 32380897
Alignment:
Q  117 ttaatgttaactaaaataacttaactcttaagtactaatg-tgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||||||  || ||| ||| | || |||||| |||| | ||||||||||||  ||  |||||||||||||||    
T  32380989 ttaatgttaactaaaataacttaactctagagcactgatgttttttttttttggatataatgcttcttttttgaataaatatagtataacact 32380897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 36367554 - 36367483
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  36367554 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 36367483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 37104382 - 37104453
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  37104382 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcact 37104453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 38331181 - 38331252
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| ||||||||| ||||||||||||||| ||||    
T  38331181 ttaactctta-gtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcact 38331252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 3427613 - 3427659
Alignment:
Q  162 ttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||| |||| |||| ||||||||| ||||||||||||||||||||    
T  3427613 ttttttggatatagtgattcttttttggatcgatatagtataacact 3427659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 34096426 - 34096392
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||||||||||||||||||| ||||    
T  34096426 agtgcttcttttttagatcgatatagtatagcact 34096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 34432288 - 34432254
Alignment:
Q  174 agtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||||||| ||||||||||||||||||||    
T  34432288 agtgcttcttttttggatcgatatagtataacact 34432254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 10763899 - 10763932
Alignment:
Q  175 gtgcttcttttttagatcgatatagtataacact 208  Q
    ||||||||||||||||||||||||||||| ||||    
T  10763899 gtgcttcttttttagatcgatatagtatagcact 10763932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 8132914 - 8132985
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcga-tacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| || || |||| ||||||||| ||||||||||| ||| ||||    
T  8132914 ttaactctta-gtactgatgtgttctttttttgaatatagtgattcttttttggatcgatatagaatatcact 8132985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 144
Target Start/End: Complemental strand, 34432353 - 34432325
Alignment:
Q  116 attaatgttaactaaaataacttaactct 144  Q
    |||||||||||||||||||||||||||||    
T  34432353 attaatgttaactaaaataacttaactct 34432325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 52895077 - 52895006
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcg-atacagtgcttcttttttagatcgatatagtataacact 208  Q
    |||||||||| ||||| |||||||||||||| | ||| |||| || |||||| ||||||||||||||| ||||    
T  52895077 ttaactctta-gtactgatgtgttctttttttggatatagtgatttttttttggatcgatatagtatatcact 52895006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 41571 - 41388
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagattaagacgatta 119  Q
    |||| ||||||||||| |||||||||||||||||||||  ||||| |||||  ||| ||||||| ||||||||||| ||||||||||||  | ||| |||    
T  41571 gttggaattgagttagcagagttgtctttggatgaaccgaatttgcaagctgatttgtatcttgctgatggaaatgaaggagaggagatgtaaacg-tta 41473  T
Q  120 atgttaactaaaataacttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtataacact 208  Q
      |||| ||   |    ||||||||| |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  41472 --gttacctgtta-gtgttaactctt-agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtataacact 41388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 27273 - 27185
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||| |  ||| ||||||| |||||| |||||||||||||||||    
T  27273 gttggaattgagttagcagagttgtctttggatgaaccagatttgaaagataatttgtatcttgatgatgggaatggaggagaggagat 27185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 27160 - 27095
Alignment:
Q  137 ttaactcttaagtactaatgtgttcttttttcgatacagtgcttcttttttagatcgatatagtata 203  Q
    |||||||||| ||||| |||||||||||||| ||||  ||||||||||||| |||||||||||||||    
T  27160 ttaactctta-gtactgatgtgttcttttttggatatggtgcttcttttttggatcgatatagtata 27095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 44088 - 44005
Alignment:
Q  25 aattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgttgatggaaatggaggagaggagat 108  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| |  ||| ||||||| |||||| |||| ||||||||||||    
T  44088 aattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatgaaggagaggagat 44005  T

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Target: scaffold0177 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 25106 - 25041
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgtt 85  Q
    |||| ||||||||||| |||||||||||||||||||||||||| |||||||  ||| |||||||||    
T  25106 gttggaattgagttagcagagttgtctttggatgaaccagattaggaagctgatttgtatcttgtt 25041  T

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Target: scaffold0640 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 7644 - 7579
Alignment:
Q  20 gttgtaattgagttagtagagttgtctttggatgaaccagatttggaagctcgtttatatcttgtt 85  Q
    |||| ||||||||||| ||||||||||||| ||||||| |||| |||||||  ||| |||||||||    
T  7644 gttggaattgagttagcagagttgtctttgaatgaaccggattaggaagctgatttgtatcttgtt 7579  T

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