View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15255_low_19 (Length: 224)
Name: NF15255_low_19
Description: NF15255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15255_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 3925130 - 3924993
Alignment:
| Q |
13 |
cataggatgataataaatttcatactcataattgattcttgactcatgtacaccattcatgtgttcaattttgggatcaaatacagtatacattataaaa |
112 |
Q |
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| T |
3925130 |
cataggatgataataaatttcatactcataattgattcttgactcatgtacaccattcatgtgttcaattttgggatcaaatacagtatacattataaaa |
3925031 |
T |
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| Q |
113 |
ttttgactcatgtacttcttaattatggttcatatgac |
150 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
3925030 |
ttttgactcatgtacttcttaattatggttcatatgac |
3924993 |
T |
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