View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15255_low_9 (Length: 359)
Name: NF15255_low_9
Description: NF15255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15255_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 18 - 347
Target Start/End: Complemental strand, 37721170 - 37720841
Alignment:
| Q |
18 |
acttaaaatcttaacaacaatacactaaaacactcaactaaatttcaagactttacaaggaacacaaatcagagaagatgatcaaatgaaaaagttcatc |
117 |
Q |
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| T |
37721170 |
acttaaaatcttaacaacaatacactaaaacactcaactaaatttcaagactttacaaggaacacaaatcagagaagatgatcaaatgaaaaagttcatc |
37721071 |
T |
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| Q |
118 |
caattcactcaagaactcaaaagaaaagactccaattttgtaatcccagacatcctaatgacagtattcaacatgaaaacataattgggtcgtgacataa |
217 |
Q |
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| T |
37721070 |
catttcactcaagaactcaaaagaaaagactccaattttgtaatcccagacatcctaatgacagtattcaacatgaaaacataattgggtcgtgacataa |
37720971 |
T |
|
| Q |
218 |
tcttgcaaattttaaggtttcaactttcaagagtaataattgatgaaaaaacagtttcaacgatgacacaaagaagatcaaattaatttaaaacatgttt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37720970 |
tcttgcaaattttaaggtttcaactttcaagagtaataattgatgaaaaaacagtttcaacgatgacacaaagaagatcaaattaatttaaaacatgttt |
37720871 |
T |
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| Q |
318 |
catagaaatactataatagtctatgatgat |
347 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37720870 |
catagaaatactataatagtctatgatgat |
37720841 |
T |
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