View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15257_low_4 (Length: 247)
Name: NF15257_low_4
Description: NF15257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15257_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 6315133 - 6315347
Alignment:
| Q |
15 |
agagaagaagtaagcagctttggaatatgcctggcaacaatccaacaagctatttagttccctgttgttttgaaatggcaaaagaaaaagcagcaaaata |
114 |
Q |
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| T |
6315133 |
agagaagaagtaagcagctttggaatatgcctggcaacaatccaacaagctatttagttccctgttgttttgaaatggcaaaagaaaaagcagcaaaata |
6315232 |
T |
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| Q |
115 |
cttagaatttggagattaacacgaggcatatagtagatggaaaaaaccacaacaggggtacttgtcatatggcaacaggtggattagtagcaacggagac |
214 |
Q |
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| T |
6315233 |
cttagaatttggagattaacacgaggcatatagtagatggaaaagaccacaacaggggtacttgtcatatggcaacaggtggattagtagcaacggagac |
6315332 |
T |
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| Q |
215 |
ttgttgggcagatgg |
229 |
Q |
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||||||||||||||| |
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| T |
6315333 |
ttgttgggcagatgg |
6315347 |
T |
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