View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15258_low_1 (Length: 298)
Name: NF15258_low_1
Description: NF15258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15258_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 24 - 288
Target Start/End: Complemental strand, 25777901 - 25777638
Alignment:
| Q |
24 |
tcttatgcatatcctcagatctgcgatattaagtgatgaagaaaatgaggcattgatgttacacttgtaccttctagttgtcggtttctcccacttcacc |
123 |
Q |
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| T |
25777901 |
tcttatgcacatcctcagatctgtgatattaagtgatgaagataatgaggcattgatgttacacttgtaccttctagttgtcggtttctcccacttcacc |
25777802 |
T |
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| Q |
124 |
aaatctcagctgattgagatttgctggttcgtgatcgtagttgttgtactacgagactttaaacactgtgccactcttcaatattcatcctgcaagtggg |
223 |
Q |
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|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
25777801 |
aaatctcagctgattgagatttaccagttcgtgatcgtagttgttgtactacgagactttaaacattgtgccactcttcaatattcatcctgcaagtggg |
25777702 |
T |
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| Q |
224 |
ttgctcatccaattacttgcgtgcttgttttgttctgtttgttgacaaattttcaggtttctgtg |
288 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
25777701 |
ttgctcatccaattacttgcgtgcttgttttgttctg-ttgttgacaaattttcaggtttctgtg |
25777638 |
T |
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