View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1525_1D_high_1 (Length: 339)
Name: NF1525_1D_high_1
Description: NF1525_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1525_1D_high_1 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 93 - 339
Target Start/End: Original strand, 49866150 - 49866396
Alignment:
| Q |
93 |
aagaatactacttaccacaacacacacgagtgaattcaactttaactaagcatcggcgatgtgttttggaaagacaaacatcatattaagatcttgaaaa |
192 |
Q |
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| T |
49866150 |
aagaatactacttaccacaacacacacgagtgaattcaactttaaccaagcatcggcgatgtgtttcggaaagccaaacatcatataaagatcttgaaaa |
49866249 |
T |
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| Q |
193 |
cttccaaatttcagcagggaacattttgaaaagatgaagtaagatacaaaacatatccataaactgactttatatgttactgtcttgaccaaatcctcaa |
292 |
Q |
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| T |
49866250 |
cttccaaatttcagcagggaacattttgaaaagatgaagtaagatacaaaacatatccataaactgactttatatgttagtgtcttgaccaaatcctcaa |
49866349 |
T |
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| Q |
293 |
aaactgcaagtcaaatacattctattaaaataatagaacatatattc |
339 |
Q |
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| T |
49866350 |
aaactgcaagtcaaatacattctattaaaataatagaacatatattc |
49866396 |
T |
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