View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1526-2-Insertion-1 (Length: 687)

Name: NF1526-2-Insertion-1
Description: NF1526-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1526-2-Insertion-1
NF1526-2-Insertion-1
[»] chr2 (31 HSPs)
chr2 (474-679)||(4592847-4593052)
chr2 (254-396)||(4592627-4592769)
chr2 (569-686)||(10256021-10256138)
chr2 (495-599)||(10255919-10256027)
chr2 (247-395)||(10256485-10256632)
chr2 (252-395)||(4593399-4593541)
chr2 (274-389)||(22539115-22539226)
chr2 (276-368)||(45114914-45115006)
chr2 (270-364)||(36657634-36657728)
chr2 (252-368)||(39619273-39619390)
chr2 (278-368)||(33003741-33003831)
chr2 (323-396)||(10255738-10255810)
chr2 (273-368)||(10865201-10865296)
chr2 (252-342)||(28780079-28780169)
chr2 (254-368)||(39618028-39618141)
chr2 (278-389)||(33002900-33003009)
chr2 (249-342)||(9707862-9707955)
chr2 (253-368)||(36764752-36764867)
chr2 (252-342)||(1090541-1090632)
chr2 (252-342)||(6924103-6924194)
chr2 (250-368)||(17600710-17600826)
chr2 (278-368)||(36766103-36766193)
chr2 (278-366)||(45227240-45227327)
chr2 (318-368)||(32946712-32946762)
chr2 (248-381)||(38018381-38018514)
chr2 (253-305)||(10255696-10255749)
chr2 (250-342)||(5439064-5439156)
chr2 (253-297)||(17815461-17815505)
chr2 (249-360)||(19222859-19222970)
chr2 (254-342)||(41727126-41727214)
chr2 (273-360)||(44258005-44258092)
[»] chr5 (59 HSPs)
chr5 (474-687)||(5347943-5348158)
chr5 (251-396)||(5347720-5347865)
chr5 (495-686)||(36429532-36429723)
chr5 (253-395)||(5348501-5348642)
chr5 (249-396)||(36429277-36429423)
chr5 (253-395)||(31808276-31808417)
chr5 (252-396)||(36681845-36681986)
chr5 (254-396)||(7491248-7491392)
chr5 (247-368)||(19897385-19897506)
chr5 (254-388)||(33136590-33136723)
chr5 (253-368)||(17640352-17640467)
chr5 (270-368)||(43492769-43492867)
chr5 (596-668)||(26380043-26380115)
chr5 (274-396)||(29500028-29500150)
chr5 (253-368)||(38559570-38559685)
chr5 (254-340)||(17641744-17641830)
chr5 (323-396)||(36430060-36430132)
chr5 (249-366)||(38561144-38561260)
chr5 (272-368)||(34088593-34088688)
chr5 (279-389)||(10326845-10326955)
chr5 (253-368)||(23094739-23094854)
chr5 (254-309)||(36430117-36430172)
chr5 (253-368)||(26626570-26626686)
chr5 (245-368)||(19898806-19898929)
chr5 (277-395)||(29500700-29500817)
chr5 (254-309)||(23093239-23093294)
chr5 (276-366)||(1302791-1302881)
chr5 (250-396)||(36681034-36681175)
chr5 (253-396)||(7493203-7493347)
chr5 (312-384)||(21012417-21012487)
chr5 (248-364)||(34384968-34385085)
chr5 (272-368)||(34089951-34090047)
chr5 (254-366)||(43492543-43492654)
chr5 (254-368)||(1301227-1301339)
chr5 (253-360)||(5874258-5874365)
chr5 (252-360)||(459467-459575)
chr5 (252-360)||(6681263-6681371)
chr5 (278-366)||(27915075-27915161)
chr5 (249-360)||(8408156-8408267)
chr5 (248-360)||(18146441-18146553)
chr5 (253-360)||(39760568-39760675)
chr5 (254-360)||(8159935-8160041)
chr5 (250-360)||(17526052-17526162)
chr5 (276-381)||(971249-971352)
chr5 (251-360)||(6844938-6845047)
chr5 (272-314)||(26625059-26625101)
chr5 (271-360)||(38482971-38483060)
chr5 (248-342)||(38977552-38977646)
chr5 (254-307)||(1144439-1144492)
chr5 (253-342)||(17526847-17526936)
chr5 (253-342)||(19292226-19292315)
chr5 (253-342)||(19877679-19877767)
chr5 (253-360)||(8407380-8407487)
chr5 (253-360)||(9475178-9475285)
chr5 (249-297)||(9587503-9587551)
chr5 (253-360)||(11445832-11445939)
chr5 (249-297)||(19293267-19293315)
chr5 (253-360)||(38395380-38395487)
chr5 (253-360)||(38396147-38396254)
[»] chr3 (61 HSPs)
chr3 (474-687)||(54560253-54560468)
chr3 (492-687)||(50837942-50838139)
chr3 (495-686)||(47470944-47471134)
chr3 (253-396)||(54560032-54560175)
chr3 (249-396)||(50838253-50838399)
chr3 (252-395)||(54560812-54560954)
chr3 (254-395)||(1576486-1576626)
chr3 (254-395)||(1577506-1577645)
chr3 (252-396)||(47471470-47471613)
chr3 (259-396)||(43546371-43546507)
chr3 (249-395)||(50837455-50837599)
chr3 (254-396)||(35942098-35942241)
chr3 (276-381)||(50382749-50382853)
chr3 (249-368)||(11032382-11032501)
chr3 (254-368)||(52946366-52946480)
chr3 (254-381)||(31800374-31800499)
chr3 (249-368)||(1137609-1137728)
chr3 (254-368)||(49725987-49726101)
chr3 (254-368)||(52118264-52118378)
chr3 (253-389)||(50381851-50381986)
chr3 (249-368)||(52947788-52947906)
chr3 (254-364)||(1136240-1136350)
chr3 (323-396)||(47470763-47470835)
chr3 (253-394)||(28539353-28539491)
chr3 (279-389)||(35942778-35942887)
chr3 (272-366)||(51149983-51150077)
chr3 (253-389)||(31799469-31799603)
chr3 (245-368)||(34651382-34651506)
chr3 (245-368)||(34649866-34649989)
chr3 (254-368)||(11033763-11033877)
chr3 (273-368)||(40954663-40954759)
chr3 (254-364)||(32610819-32610929)
chr3 (277-351)||(33831660-33831734)
chr3 (252-342)||(36026967-36027057)
chr3 (252-360)||(10657146-10657254)
chr3 (253-358)||(43640785-43640890)
chr3 (254-367)||(49964678-49964791)
chr3 (254-342)||(1033840-1033927)
chr3 (254-342)||(35234839-35234927)
chr3 (254-309)||(47470722-47470778)
chr3 (254-309)||(49724626-49724681)
chr3 (270-305)||(52116926-52116961)
chr3 (250-360)||(35154662-35154772)
chr3 (253-363)||(43643792-43643902)
chr3 (253-342)||(11653821-11653910)
chr3 (252-360)||(3370777-3370885)
chr3 (253-360)||(13342367-13342474)
chr3 (276-368)||(25580806-25580897)
chr3 (254-334)||(55455882-55455962)
chr3 (254-297)||(6757006-6757049)
chr3 (251-342)||(32951015-32951106)
chr3 (251-297)||(29587095-29587141)
chr3 (251-297)||(40066635-40066681)
chr3 (270-360)||(45078348-45078438)
chr3 (248-297)||(45252529-45252579)
chr3 (253-342)||(54627022-54627111)
chr3 (254-294)||(6756713-6756753)
chr3 (318-366)||(25582422-25582470)
chr3 (254-342)||(29491998-29492086)
chr3 (253-297)||(31585335-31585379)
chr3 (249-360)||(52170924-52171035)
[»] chr8 (38 HSPs)
chr8 (474-687)||(14790893-14791112)
chr8 (249-396)||(14790667-14790814)
chr8 (495-686)||(20111970-20112160)
chr8 (7-203)||(11754905-11755098)
chr8 (253-395)||(14791449-14791590)
chr8 (254-396)||(20112271-20112411)
chr8 (251-389)||(20111489-20111625)
chr8 (253-366)||(14864971-14865084)
chr8 (252-368)||(35124626-35124742)
chr8 (254-368)||(767605-767719)
chr8 (272-368)||(32672308-32672404)
chr8 (253-368)||(11681568-11681683)
chr8 (254-368)||(11680170-11680284)
chr8 (254-366)||(27242993-27243105)
chr8 (254-366)||(27254568-27254680)
chr8 (272-368)||(35123254-35123350)
chr8 (276-366)||(21190065-21190155)
chr8 (254-366)||(32219538-32219650)
chr8 (270-374)||(32673670-32673774)
chr8 (254-366)||(14866109-14866222)
chr8 (517-588)||(18308842-18308911)
chr8 (272-368)||(12128081-12128177)
chr8 (311-389)||(26544581-26544659)
chr8 (251-342)||(38713360-38713451)
chr8 (270-360)||(14053958-14054048)
chr8 (249-360)||(355945-356056)
chr8 (254-342)||(39132733-39132821)
chr8 (335-379)||(45105524-45105567)
chr8 (251-342)||(31127684-31127775)
chr8 (272-314)||(27241619-27241661)
chr8 (272-314)||(27247492-27247534)
chr8 (251-360)||(28775997-28776106)
chr8 (311-361)||(36338521-36338571)
chr8 (252-342)||(36469176-36469265)
chr8 (251-360)||(9737137-9737246)
chr8 (253-342)||(41578098-41578187)
chr8 (253-360)||(10443057-10443164)
chr8 (254-342)||(15565625-15565713)
[»] chr6 (25 HSPs)
chr6 (485-687)||(15347663-15347867)
chr6 (492-687)||(17732499-17732698)
chr6 (492-684)||(6009115-6009313)
chr6 (252-396)||(15347430-15347574)
chr6 (495-686)||(30709739-30709934)
chr6 (250-396)||(17732810-17732955)
chr6 (253-396)||(30709490-30709630)
chr6 (252-395)||(17732013-17732155)
chr6 (249-396)||(30710273-30710418)
chr6 (251-389)||(15348198-15348334)
chr6 (259-396)||(6009422-6009558)
chr6 (254-395)||(6008641-6008781)
chr6 (254-368)||(10917859-10917973)
chr6 (272-368)||(4137673-4137769)
chr6 (254-364)||(1387596-1387706)
chr6 (254-368)||(4138916-4139029)
chr6 (252-368)||(10919272-10919388)
chr6 (254-368)||(1378455-1378568)
chr6 (254-368)||(1386203-1386316)
chr6 (253-342)||(23075347-23075436)
chr6 (271-360)||(8812840-8812929)
chr6 (279-389)||(1792644-1792753)
chr6 (272-360)||(14394690-14394778)
chr6 (253-339)||(5430189-5430275)
chr6 (255-297)||(23074300-23074342)
[»] chr1 (49 HSPs)
chr1 (492-686)||(47445466-47445660)
chr1 (249-389)||(47444983-47445122)
chr1 (253-396)||(47445769-47445913)
chr1 (254-395)||(36475966-36476106)
chr1 (275-395)||(27585312-27585429)
chr1 (252-368)||(11343355-11343471)
chr1 (252-368)||(11501375-11501491)
chr1 (252-368)||(14282778-14282894)
chr1 (252-368)||(14284194-14284310)
chr1 (253-394)||(36475270-36475411)
chr1 (251-361)||(786732-786843)
chr1 (251-368)||(41707005-41707122)
chr1 (249-368)||(11341964-11342083)
chr1 (249-368)||(11499983-11500102)
chr1 (248-389)||(27585987-27586125)
chr1 (277-389)||(45575952-45576061)
chr1 (272-368)||(4564152-4564248)
chr1 (248-368)||(51306292-51306413)
chr1 (254-368)||(41729856-41729970)
chr1 (254-368)||(42813796-42813910)
chr1 (273-368)||(42813248-42813343)
chr1 (250-368)||(16420114-16420231)
chr1 (272-366)||(38482469-38482563)
chr1 (272-368)||(51304754-51304851)
chr1 (252-368)||(16422060-16422180)
chr1 (254-363)||(46318760-46318869)
chr1 (249-360)||(20898509-20898620)
chr1 (312-363)||(24646463-24646514)
chr1 (253-360)||(20899286-20899393)
chr1 (312-368)||(26991038-26991094)
chr1 (251-342)||(3898450-3898541)
chr1 (251-342)||(43680361-43680452)
chr1 (254-297)||(44209101-44209144)
chr1 (279-389)||(5158677-5158785)
chr1 (252-342)||(18806629-18806719)
chr1 (253-307)||(46294436-46294490)
chr1 (251-297)||(52869655-52869701)
chr1 (272-360)||(37612849-37612937)
chr1 (253-342)||(38787531-38787620)
chr1 (248-297)||(45141461-45141510)
chr1 (254-335)||(52360345-52360426)
chr1 (253-297)||(16834364-16834408)
chr1 (254-342)||(27234232-27234320)
chr1 (253-360)||(29330062-29330169)
chr1 (254-342)||(29358401-29358489)
chr1 (254-306)||(31675384-31675436)
chr1 (254-306)||(44431180-44431232)
chr1 (326-370)||(46319143-46319187)
chr1 (249-305)||(46319178-46319234)
[»] scaffold0102 (3 HSPs)
scaffold0102 (495-686)||(32602-32793)
scaffold0102 (251-396)||(32348-32493)
scaffold0102 (254-396)||(33138-33280)
[»] chr4 (52 HSPs)
chr4 (495-686)||(27455168-27455361)
chr4 (253-395)||(621531-621672)
chr4 (254-396)||(27454917-27455057)
chr4 (254-395)||(620470-620610)
chr4 (254-395)||(49681264-49681402)
chr4 (492-575)||(49681835-49681918)
chr4 (584-686)||(49681748-49681850)
chr4 (253-396)||(21225798-21225938)
chr4 (253-366)||(49682055-49682167)
chr4 (253-368)||(16508143-16508258)
chr4 (275-389)||(31633614-31633726)
chr4 (254-368)||(2613631-2613745)
chr4 (254-368)||(50662995-50663109)
chr4 (254-368)||(50664422-50664536)
chr4 (252-368)||(16506867-16506983)
chr4 (271-366)||(23102304-23102399)
chr4 (254-368)||(55978475-55978589)
chr4 (252-368)||(23100936-23101052)
chr4 (306-389)||(11147797-11147879)
chr4 (248-368)||(2215779-2215899)
chr4 (253-389)||(31632381-31632514)
chr4 (272-368)||(56065151-56065247)
chr4 (253-368)||(2217152-2217267)
chr4 (254-368)||(56063647-56063762)
chr4 (253-389)||(21226525-21226658)
chr4 (254-370)||(677046-677162)
chr4 (253-396)||(21224245-21224385)
chr4 (253-309)||(27455765-27455821)
chr4 (254-368)||(2615022-2615136)
chr4 (305-389)||(11148098-11148180)
chr4 (323-396)||(27455708-27455780)
chr4 (253-388)||(31779860-31779995)
chr4 (273-368)||(52897714-52897809)
chr4 (277-368)||(52896329-52896420)
chr4 (272-309)||(3880872-3880909)
chr4 (251-297)||(30317555-30317601)
chr4 (256-309)||(6194940-6194993)
chr4 (272-360)||(21917096-21917184)
chr4 (254-343)||(36077284-36077373)
chr4 (253-342)||(36870096-36870185)
chr4 (249-297)||(7971917-7971965)
chr4 (249-360)||(32859919-32860030)
chr4 (248-299)||(5865442-5865492)
chr4 (251-342)||(50182043-50182134)
chr4 (251-297)||(15031882-15031928)
chr4 (249-342)||(23161089-23161182)
chr4 (245-297)||(23591299-23591352)
chr4 (272-360)||(28255921-28256009)
chr4 (252-297)||(37687493-37687538)
chr4 (323-367)||(3880894-3880938)
chr4 (254-342)||(13966696-13966784)
chr4 (258-342)||(46614755-46614839)
[»] chr7 (36 HSPs)
chr7 (533-680)||(36067603-36067750)
chr7 (254-388)||(3987239-3987371)
chr7 (250-396)||(36067292-36067435)
chr7 (253-389)||(32390892-32391025)
chr7 (276-384)||(36068113-36068220)
chr7 (277-396)||(30480689-30480808)
chr7 (254-380)||(6733017-6733141)
chr7 (254-368)||(31286866-31286980)
chr7 (271-368)||(31285487-31285584)
chr7 (250-389)||(6733140-6733276)
chr7 (277-388)||(24240589-24240699)
chr7 (253-368)||(35394712-35394827)
chr7 (245-368)||(29721083-29721203)
chr7 (254-366)||(34894195-34894307)
chr7 (254-368)||(35393163-35393277)
chr7 (254-342)||(26157272-26157360)
chr7 (249-309)||(29417146-29417206)
chr7 (294-395)||(3986569-3986667)
chr7 (254-309)||(21125695-21125750)
chr7 (339-389)||(41589267-41589315)
chr7 (253-342)||(29418148-29418237)
chr7 (492-529)||(36067544-36067581)
chr7 (245-360)||(3627927-3628042)
chr7 (254-342)||(22021769-22021856)
chr7 (250-297)||(11455413-11455460)
chr7 (254-297)||(17774288-17774331)
chr7 (252-307)||(26928069-26928124)
chr7 (254-309)||(33697389-33697444)
chr7 (273-360)||(39628393-39628480)
chr7 (250-360)||(45154905-45155015)
chr7 (274-360)||(17271802-17271888)
chr7 (253-342)||(5668244-5668333)
chr7 (303-366)||(32389978-32390038)
chr7 (254-342)||(34994702-34994790)
chr7 (250-342)||(41080258-41080350)
chr7 (253-360)||(46100898-46101005)
[»] scaffold0020 (1 HSPs)
scaffold0020 (303-388)||(1997-2080)
[»] scaffold0169 (2 HSPs)
scaffold0169 (254-389)||(26683-26817)
scaffold0169 (312-389)||(27404-27477)
[»] scaffold0006 (1 HSPs)
scaffold0006 (254-342)||(43413-43501)
[»] scaffold0096 (1 HSPs)
scaffold0096 (254-309)||(35077-35132)
[»] scaffold0340 (1 HSPs)
scaffold0340 (248-306)||(1325-1383)
[»] scaffold0945 (1 HSPs)
scaffold0945 (253-342)||(1162-1251)
[»] scaffold0078 (1 HSPs)
scaffold0078 (251-348)||(1775-1872)
[»] scaffold0008 (1 HSPs)
scaffold0008 (253-342)||(239161-239250)
[»] scaffold0380 (1 HSPs)
scaffold0380 (259-295)||(7662-7697)
[»] scaffold0031 (1 HSPs)
scaffold0031 (253-297)||(95051-95095)


Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 474 - 679
Target Start/End: Original strand, 4592847 - 4593052
Alignment:
Q  474 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaa 573  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  4592847 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttgaattaatcaacaa 4592946  T
Q  574 caaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaac 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4592947 caaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaacaccaac 4593046  T
Q  674 atcaac 679  Q
    ||||||    
T  4593047 atcaac 4593052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 254 - 396
Target Start/End: Original strand, 4592627 - 4592769
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4592627 gagtgaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccatgaaattatcaaacgtta 4592726  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4592727 gtcaattaccccccttccgtttgttttggctgttaagtgacta 4592769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 569 - 686
Target Start/End: Original strand, 10256021 - 10256138
Alignment:
Q  569 aacaacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaaca 668  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  10256021 aacaacaaccctttggaattcatcaacaacaaaatgaataatagaaaagatcatgaacttgttggaaaaagaacaaggtttatgatgaatagcatgaaca 10256120  T
Q  669 ccaacatcaacatcaacg 686  Q
     ||||||||||| |||||    
T  10256121 acaacatcaacagcaacg 10256138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 495 - 599
Target Start/End: Original strand, 10255919 - 10256027
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctc----tctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattca 590  Q
    |||||||||||||||||||||||||||||| |||||||||||    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  10255919 aacaacatcatcatcaacatcacacactttataatgattctctctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaattca 10256018  T
Q  591 tcaacaaca 599  Q
    |||||||||    
T  10256019 tcaacaaca 10256027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 247 - 395
Target Start/End: Complemental strand, 10256632 - 10256485
Alignment:
Q  247 ttaaaatgagtaaataggcaaaaacccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatc 345  Q
    ||||| ||||||||||||||||||   |||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||| |||||||||||  |    
T  10256632 ttaaattgagtaaataggcaaaaaaaacccttgaaattgtagctttcgtcaaaaacccccctgatttctaggaaacttcaaaaac-cccctgaaattgcc 10256534  T
Q  346 aaacgttagtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||||||||| | |||||||||||||||| |||| |||||    
T  10256533 aaacgttagtcaattaccccgc-tccgtttgttttggctattaaatgact 10256485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 4593541 - 4593399
Alignment:
Q  252 atgagtaaataggcaaaaacc-cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    |||||||||||||||||||   ||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||    
T  4593541 atgagtaaataggcaaaaaaaacccctgaaaatgtagctttcgtcaaaaaccccc-tgatttttaggaaacttcaaaaaaccccctgaaattgacaaacg 4593443  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    | ||||||||| ||||| ||||||||||||||||||||| |||||    
T  4593442 tcagtcaattatccccc-tccgtttgttttggctgttaaatgact 4593399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 274 - 389
Target Start/End: Complemental strand, 22539226 - 22539115
Alignment:
Q  274 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgt 373  Q
    |||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||   |||||    
T  22539226 ccctgaaattgtaactttcgtcaagaaccccc-tgacttttaaaaaacttcaaaaaaccccatgaaattgtcaaacgttagtcaattacccc---tccgt 22539131  T
Q  374 ttgttttggctgttaa 389  Q
     |||||||||||||||    
T  22539130 atgttttggctgttaa 22539115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 276 - 368
Target Start/End: Complemental strand, 45115006 - 45114914
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| | ||||||| |||||||||||| ||||||||||||    
T  45115006 ctgaaattgtaactttcgtcaaaaacccccttgacttttaagaaacttcaaaacccctcatgaaattgtcaaacgttagttaattacccccct 45114914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 36657728 - 36657634
Alignment:
Q  270 acccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccc 364  Q
    |||||||| |||||||||||||||||||||||  |||||| ||||   ||||||||||||||| |||||||||||||||||| |||||| |||||    
T  36657728 acccccctaaaattgtaactttcgtcaaaaacttccctgaattttgcaaaacttcaaaaaccctcctgaaattatcaaacgtcagtcaaataccc 36657634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 39619390 - 39619273
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaa-aacccccctgaaattatcaaacg 350  Q
    |||||||||||| |||  |||| |||||||||||| |||||||||||||||||||||| ||||   |||||| ||| | ||||||||||||| |||| ||    
T  39619390 atgagtaaatagtcaattaccctcctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaactttaaataccccccctgaaattgtcaagcg 39619291  T
Q  351 ttagtcaattacccccct 368  Q
    || |||||||||||||||    
T  39619290 tttgtcaattacccccct 39619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 278 - 368
Target Start/End: Complemental strand, 33003831 - 33003741
Alignment:
Q  278 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||| |||||  || |||||||||||||||||| |||||  ||| ||||||| ||||||||| |||||||||||||||    
T  33003831 gaaattgtaactttcgtaaaaaaaaccgctgatttttaagaaacttaaaaaattcccttgaaattgtcaaacgttggtcaattacccccct 33003741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 10255738 - 10255810
Alignment:
Q  323 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  10255738 tcaaaaagccccttgaaattatcaaacgtcagtcaattacccccc-tccgtttgttttggctgttaaatgacta 10255810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 10865201 - 10865296
Alignment:
Q  273 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||   |||  |||||||||| |||||||||||||| |||  |||||||||||||||    
T  10865201 cccctgaaattgtaacttttgtcaaaaaccctcctgaattttgcaaaatgtcaaaaaccctcctgaaattatcaagcgtctgtcaattacccccct 10865296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 28780079 - 28780169
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||  ||||||||||  || |  |||||||||| ||||||||||||||    
T  28780079 atgagtaaataggcaactacccccctgaaattgtaagtttcgtcaattacccccctgaaattaagaaaacttcaaatacccccctgaaatt 28780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 39618028 - 39618141
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  ||||||||||||||||| ||||||||||||| |||||| | ||||   |||||||||| | |||||||||||| |||| |||      
T  39618028 gagtaaatagtcaattacccccctgaaattgtagctttcgtcaaaaaaccccctaaattttgcaaaacttcaaata-ccccctgaaattgtcaagcgtct 39618126  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  39618127 gtcaattacccccct 39618141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 278 - 389
Target Start/End: Original strand, 33002900 - 33003009
Alignment:
Q  278 gaaattgtaactttcgtcaaaaacccccct-gatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 376  Q
    ||||||||||||||| | |||||  ||||| |||||||||||||||||||||| | |  ||||||| |||||||||||| ||||||||||  ||||||||    
T  33002900 gaaattgtaactttcataaaaaaaaccccttgatttttaagaaacttcaaaaa-ctcgatgaaattgtcaaacgttagttaattaccccc--tccgtttg 33002996  T
Q  377 ttttggctgttaa 389  Q
    |||||| ||||||    
T  33002997 ttttggatgttaa 33003009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 342
Target Start/End: Original strand, 9707862 - 9707955
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||| |||  |||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  9707862 aaaatgagtaaatagtcaattacccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 9707955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 36764752 - 36764867
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaa-cccccctgaaattatcaaacgt 351  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||||| |||||| | ||||   |||| ||||||| ||||||  ||||| |||| |||    
T  36764752 tgagtaaatagtcaattacccccc-gaaattgtaactttcgtcaaaaatcccccttaattttgcaaaacgtcaaaaacccccccaaaaattgtcaagcgt 36764850  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  36764851 ctgtcaattacccccct 36764867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 1090541 - 1090632
Alignment:
Q  252 atgagtaaataggcaaaaacccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||||  ||||| ||||||||||||| |||||||||  |||||| |||  || |  |||||||||| ||||||||||||||    
T  1090541 atgagtaaataggcaatgaccccccctgaaattgtaagtttcgtcaattacccccatgaaattaagaaaacttcaaatacccccctgaaatt 1090632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 6924103 - 6924194
Alignment:
Q  252 atgagtaaataggcaaaaacccc-cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||||  ||||| ||||||||||||| |||||||||  || |||||||  || |  |||||||||| ||||||||||||||    
T  6924103 atgagtaaataggcaactaccccccctgaaattgtaagtttcgtcaattactcccctgaaattaagaaaacttcaaatacccccctgaaatt 6924194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 368
Target Start/End: Complemental strand, 17600826 - 17600710
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    |||||||||||||| |||  ||| || |||||||||| ||||| ||||||||| || ||| ||||   ||||||||||||| | | ||||||| ||||||    
T  17600826 aaatgagtaaatagtcaattacctcc-tgaaattgtagctttcatcaaaaacctcc-tgaattttgcaaaacttcaaaaactcacgtgaaattgtcaaac 17600729  T
Q  350 gttagtcaattacccccct 368  Q
    || |||||| |||||||||    
T  17600728 gtcagtcaaatacccccct 17600710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 368
Target Start/End: Complemental strand, 36766193 - 36766103
Alignment:
Q  278 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||| ||||||||||||||| | |||||| ||||   |||| |||||| ||||||||||||| |||| |||  ||||||||| |||||    
T  36766193 gaaattgcaactttcgtcaaaaatctccctgaattttgcaaaacgtcaaaatcccccctgaaattgtcaagcgtctgtcaattacacccct 36766103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 366
Target Start/End: Original strand, 45227240 - 45227327
Alignment:
Q  278 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    ||||||||||||||||||||||| |||| ||| ||||   |||| || ||||||||||||||||| |||| |||  |||||||| ||||    
T  45227240 gaaattgtaactttcgtcaaaaaaccccttgaattttgtaaaacgtc-aaaacccccctgaaattgtcaagcgtctgtcaattatcccc 45227327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 32946712 - 32946762
Alignment:
Q  318 aaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||| |||| ||||||| |||||||| |||||| |||||||||    
T  32946712 aaacttcaaaaaaccccttgaaattgtcaaacgtcagtcaaatacccccct 32946762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 381
Target Start/End: Original strand, 38018381 - 38018514
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaacttt-cgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca 346  Q
    |||||||||| ||||||||||||   |   |||||||||||||| |||||||| |    |||| ||||| |||| |||||||||   | ||||||  |||    
T  38018381 taaaatgagtgaataggcaaaaaaaacttcgaaattgtaacttttcgtcaaaatcattactgacttttacgaaatttcaaaaactttcatgaaatcgtca 38018480  T
Q  347 aacgttagtcaattaccccccttccgtttgttttg 381  Q
    ||||||||||||||| ||||||||||||| |||||    
T  38018481 aacgttagtcaatta-cccccttccgtttattttg 38018514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 10255696 - 10255749
Alignment:
Q  253 tgagtaaataggcaaaaacc-cccctgaaattgtaactttcgtcaaaaaccccc 305  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||| ||||    
T  10255696 tgagtgaataggcaaaaaaaacccctgaaattgtaactttcgtcaaaaagcccc 10255749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 342
Target Start/End: Complemental strand, 5439156 - 5439064
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||| |||   ||||||||||||||||| |||||||||  ||| ||||||  || |  |||||||||  |||||| |||||||    
T  5439156 aaatgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccccttgaaatt 5439064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 17815461 - 17815505
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||    
T  17815461 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 17815505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 19222859 - 19222970
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-a 347  Q
    |||| |||||||||| |||   ||||||||||||||||| |||| ||||  | ||||||||  || |  |||||||||  |||||||||||||| ||| |    
T  19222859 aaaaagagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaaccccctgaaattaacaaaacttcaattacccccctgaaatt-tcaca 19222957  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  19222958 acgttagtcaatt 19222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 41727214 - 41727126
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  41727214 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 41727126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 44258005 - 44258092
Alignment:
Q  273 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 360  Q
    ||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  44258005 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 44258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-104; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 474 - 687
Target Start/End: Original strand, 5347943 - 5348158
Alignment:
Q  474 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctc--tctctcttgtttgttaccttcttcaattaataaac 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||    
T  5347943 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctctctctctcttgtttgttaccttcttgaattaatcaac 5348042  T
Q  572 aacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacacca 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5348043 aacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaacacca 5348142  T
Q  672 acatcaacatcaacgt 687  Q
    ||||||||||||||||    
T  5348143 acatcaacatcaacgt 5348158  T

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Target: chr5; HSP #2
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 251 - 396
Target Start/End: Original strand, 5347720 - 5347865
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5347720 aatgagtgaataggcaaaaacccctctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 5347819  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5347820 ttagtcaattaccccccttccgtttgttttggctgttaagtgacta 5347865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 495 - 686
Target Start/End: Original strand, 36429532 - 36429723
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcatcaa 594  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  36429532 aacaacatcatcattaacatcacacactttataatgattctctctctcttgtttgttaccttcttgaattaatcaacaacaaccttttggaattcatcaa 36429631  T
Q  595 caacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    ||||| || |||||| ||||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||| ||||||||||| |||||    
T  36429632 caacaaaatgaataatagaaaagatcatgaacttgtttgaaaaagaacaaggtttatgatgaatagcatggacaacaacatcaacagcaacg 36429723  T

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Target: chr5; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 253 - 395
Target Start/End: Complemental strand, 5348642 - 5348501
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||    
T  5348642 tgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtt 5348543  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  5348542 agtcaattacccccc-tccgtttgttttggctgttaaatgact 5348501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 249 - 396
Target Start/End: Original strand, 36429277 - 36429423
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  36429277 aaaaggagtgaataggccaaaaaccccctgaaattgtaactttcgtcaaaaatccccctgatttttaagaaacttcaaaaacgcccctgaaattatcaaa 36429376  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  36429377 cgtcagtcaattacccccc-tccgtttgttttggctgttaaatgacta 36429423  T

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Target: chr5; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 253 - 395
Target Start/End: Original strand, 31808276 - 31808417
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| |||||||||||| | ||||||| |||||||||||||||||||   ||||||||||||||||||||||||||| | ||||||||| | |||||||    
T  31808276 tgagtgaataggcaaaaatctccctgaatttgtaactttcgtcaaaaatttccctgatttttaagaaacttcaaaaactctcctgaaattgttaaacgtt 31808375  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    ||||||||||||||| || |||||||||||||||||| |||||    
T  31808376 agtcaattacccccc-tcagtttgttttggctgttaaatgact 31808417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 396
Target Start/End: Complemental strand, 36681986 - 36681845
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||| ||||| |||||| |||| |||||||||||||||||| ||||| ||||||||||||||| |||||||  |||||||| ||||||| ||||||||    
T  36681986 atgagtgaatagacaaaaatccccttgaaattgtaactttcgttaaaaatccccctgatttttaaaaaacttc--aaacccccatgaaattgtcaaacgt 36681889  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||    
T  36681888 tagtcaattacccccc-tccgtttgttttgactgttaaatgacta 36681845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 254 - 396
Target Start/End: Original strand, 7491248 - 7491392
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacc---cccctgaaattatcaaacg 350  Q
    |||| |||||||||| |||| ||| |||||||||||||||||||||| | |||||| ||||||||||||| |||||     ||||||||||| | |||||    
T  7491248 gagtgaataggcaaacaccctcctaaaattgtaactttcgtcaaaaatcaccctgacttttaagaaacttaaaaaaaaaaacccctgaaattgtgaaacg 7491347  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  7491348 ttagtcaattacccccctt-cgtttgttttggctgttaaatgacta 7491392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 247 - 368
Target Start/End: Original strand, 19897385 - 19897506
Alignment:
Q  247 ttaaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca 346  Q
    ||||| ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||    
T  19897385 ttaaattgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtca 19897484  T
Q  347 aacgttagtcaattacccccct 368  Q
    | |||  |||||||||||||||    
T  19897485 agcgtctgtcaattacccccct 19897506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 33136723 - 33136590
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||| |||  ||||| ||||||||| |||||||| | |||| ||||||   ||||||||||||| ||||||||||| | ||||||||    
T  33136723 gagtgaataggcaaaaatccctttgaaagtgtaacttttgtcaaaaaactccctaatttttgcaaaacttcaaaaactcccctgaaattgttaaacgtta 33136624  T
Q  354 gtcaattaccccccttccgtttgttttggctgtta 388  Q
    |||||||||||||| ||| | ||||||||||||||    
T  33136623 gtcaattacccccc-tccatctgttttggctgtta 33136590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 17640352 - 17640467
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||| |||||||| |||    |||  |||||||||||||||||||| |||| |||     
T  17640352 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaatccccctgaatttggtaaaatgtcaaaaacccccctgaaattgtcaagcgtc 17640451  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  17640452 tgtcaattacccccct 17640467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 270 - 368
Target Start/End: Complemental strand, 43492867 - 43492769
Alignment:
Q  270 acccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||   |||| ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  43492867 acccccctgaaattgtaactttcgtcaaaaccccccctgaattttgcaaaacatcaaaaatccccctgaaattgtcaagcgtctgtcaattacccccct 43492769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 596 - 668
Target Start/End: Original strand, 26380043 - 26380115
Alignment:
Q  596 aacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaaca 668  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||    
T  26380043 aacagaatgaataacagaaaagatcatgaacttgttggaaaaagaacaaggtttatgatgaataacattaaca 26380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 274 - 396
Target Start/End: Original strand, 29500028 - 29500150
Alignment:
Q  274 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacc-cccctgaaattatcaaacgttagtcaattaccccccttccg 372  Q
    |||| ||||| ||||||| || ||||| |||||| ||||||||||||||||| ||||| | | | ||||| |||||||||||||||||||||| | ||||    
T  29500028 ccctcaaattataacttttgttaaaaatccccctaatttttaagaaacttcataaacctctcataaaattgtcaaacgttagtcaattacccctc-tccg 29500126  T
Q  373 tttgttttggctgttaagtgacta 396  Q
    |||||||||||| |||| ||||||    
T  29500127 tttgttttggctcttaaatgacta 29500150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 38559570 - 38559685
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||||| ||||||| ||||   |||  |||||||||||||||||||| |||| | |     
T  38559570 tgagtaaatagtcgattacccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcatc 38559669  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  38559670 tgtcaattacccccct 38559685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 17641830 - 17641744
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaa 340  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||||||||||||||    
T  17641830 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaa 17641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 36430132 - 36430060
Alignment:
Q  323 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||| ||||||    
T  36430132 tcaaaaacccccctgaaattgccaaacgttagtcaattac-ccccatccgtttgttttggctgttaaatgacta 36430060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 249 - 366
Target Start/End: Complemental strand, 38561260 - 38561144
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    ||||||||||||||| |||  |||||| |||||||||||||||||||||||||||| |||| ||||   |||  ||||||| |||||||||||| ||||     
T  38561260 aaaatgagtaaatagtcaattaccccc-tgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaag 38561162  T
Q  349 cgttagtcaattaccccc 366  Q
    |||  |||||||||||||    
T  38561161 cgtctgtcaattaccccc 38561144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 34088593 - 34088688
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||||    
T  34088593 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtctgtcaattacccccct 34088688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 10326955 - 10326845
Alignment:
Q  279 aaattgtaactttcgtcaaaaacccccctgatttttaagaaactt-caaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgt 377  Q
    |||||||||||||||||||||||| || |||||||||||||||||  |||||    | ||||||| |||||| |||||||| |||||||| ||||| |||    
T  10326955 aaattgtaactttcgtcaaaaacctccatgatttttaagaaacttaaaaaaaaaatcttgaaattgtcaaacattagtcaactacccccc-tccgtctgt 10326857  T
Q  378 tttggctgttaa 389  Q
    ||||||||||||    
T  10326856 tttggctgttaa 10326845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 23094854 - 23094739
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||| || ||||| ||||   |||  |||||||||||||||||||| |||| |||     
T  23094854 tgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaacctcctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgta 23094755  T
Q  353 agtcaattacccccct 368  Q
     |||||||| ||||||    
T  23094754 tgtcaattatccccct 23094739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 36430172 - 36430117
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  36430172 gagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctga 36430117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 26626686 - 26626570
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaa-acccccctgaaattatcaaacgt 351  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||||| ||||||| ||||   |||| ||||||  ||||||||||||| |||| |||    
T  26626686 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaactcccctgaattttgtaaaacgtcaaaacccccccctgaaattgtcaagcgt 26626587  T
Q  352 tagtcaattacccccct 368  Q
      ||||||||| |||||    
T  26626586 ctgtcaattacgcccct 26626570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 368
Target Start/End: Complemental strand, 19898929 - 19898806
Alignment:
Q  245 atttaaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattat 344  Q
    |||||| | |||||||||| |||  |||||||| ||||||||||||| ||||||||||||||||| ||||   |||  |||||  |||||| |||||| |    
T  19898929 atttaagaagagtaaatagtcaattacccccctaaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaacccccccccgaaattgt 19898830  T
Q  345 caaacgttagtcaattacccccct 368  Q
    ||| |||  |||||||||||||||    
T  19898829 caagcgtcggtcaattacccccct 19898806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 277 - 395
Target Start/End: Complemental strand, 29500817 - 29500700
Alignment:
Q  277 tgaaattgtaactttcgtcaaaaacccccc-tgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 375  Q
    ||||||| ||| ||||||||||||| |||| | | |||||||||| ||||||||   || ||||||| ||||||||||||||||||||  |  |||||||    
T  29500817 tgaaattataattttcgtcaaaaactccccataacttttaagaaagttcaaaaaaatccttgaaattgtcaaacgttagtcaattaccttc--tccgttt 29500720  T
Q  376 gttttggctgttaagtgact 395  Q
    ||||||| |||||| |||||    
T  29500719 gttttggttgttaaatgact 29500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 23093239 - 23093294
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||    
T  23093239 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaccccctga 23093294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 276 - 366
Target Start/End: Complemental strand, 1302881 - 1302791
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    ||||||||||||||||||||||||| |||||| | ||||   |||  ||||||| |||||||||||| |||| |||  |||||||||||||    
T  1302881 ctgaaattgtaactttcgtcaaaaatccccctaaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtctgtcaattaccccc 1302791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 396
Target Start/End: Original strand, 36681034 - 36681175
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctg-aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||||||| ||||| |||||| ||||||  ||||||||||||| |||||||| |  |||  |||  || |||||||||||||||   ||||||| |||||    
T  36681034 aaatgagtgaatagacaaaaatcccccttcaaattgtaacttttgtcaaaaatcttcctacttt--aaaaaacttcaaaaaccctt-tgaaattgtcaaa 36681130  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||    |||| |||||||||||||| ||||||    
T  36681131 cgttagtcaattaccccc---tcgttcgttttggctgttaaatgacta 36681175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 396
Target Start/End: Complemental strand, 7493347 - 7493203
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaaccc-ccctgatttttaagaaacttcaaaaacc-cccctgaaattatcaaacg 350  Q
    ||||| |||||||||||  || | |||||| ||||||||||| ||||| || |||| |||||||||||| |||||||||| ||| | ||||| |||||      
T  7493347 tgagtgaataggcaaaattcctcttgaaatcgtaactttcgtaaaaaatcctccctaatttttaagaaatttcaaaaacctcccataaaattgtcaaata 7493248  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||| |  || || ||||||||||| |||||| ||||||    
T  7493247 ttagtcaattatcttcc-tctgtttgttttggttgttaaatgacta 7493203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 21012487 - 21012417
Alignment:
Q  312 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggct 384  Q
    ||||||||||||||||| ||| | ||||||| |||||||||| ||||||||||||  || |||||||||||||    
T  21012487 tttaagaaacttcaaaaccccacttgaaattgtcaaacgttaatcaattaccccc--tctgtttgttttggct 21012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 34384968 - 34385085
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccc-tgaaattatca 346  Q
    |||| ||||||||||| |||   | ||||||||||||||| |||||||||||| |||| ||| ||||   |||| ||||||||||||| ||||||| |||    
T  34384968 taaattgagtaaatagtcaattgctcccctgaaattgtaattttcgtcaaaaaaccccttgaattttgcaaaacgtcaaaaaccccccttgaaattgtca 34385067  T
Q  347 aacgttagtcaattaccc 364  Q
    | |||  |||||||||||    
T  34385068 agcgtctgtcaattaccc 34385085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 34090047 - 34089951
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||  || |||| ||||   |||  ||||||||||| |||||||| |||| |||  |||||||| ||||||    
T  34090047 ccccctgaaattgtaactttcgtcaaaaattcctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtctgtcaattatccccct 34089951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 43492543 - 43492654
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  ||| |||||||||||||||||||||||||||||||    | ||||   |||| || ||||||||||||||||| |||| |||      
T  43492543 gagtaaatagtcaattacctccctgaaattgtaactttcgtcaaaaaccccttgaaattttgcaaaacgtc-aaaacccccctgaaattgtcaagcgtct 43492641  T
Q  354 gtcaattaccccc 366  Q
    |||||||||||||    
T  43492642 gtcaattaccccc 43492654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 1301227 - 1301339
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  | |||| ||||||||||||||| ||||||||||||||||| ||||   |||  |||||||   |||||||||| |||| |||      
T  1301227 gagtaaatagtcaattatccccttgaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaaaa--tccctgaaattgtcaagcgtct 1301324  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  1301325 gtcaattacccccct 1301339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 5874258 - 5874365
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| ||||||||||||| ||  | |||||   |||||||||| ||| || |||| ||||||| |||||||||||||||   ||||||| |||||||||    
T  5874258 tgagtgaataggcaaaaacacctttaaaattagtactttcgtcataaatcctcctggtttttaaaaaacttcaaaaacccttttgaaattgtcaaacgtt 5874357  T
Q  353 agtcaatt 360  Q
     |||||||    
T  5874358 ggtcaatt 5874365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 459467 - 459575
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacg 350  Q
    |||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||    
T  459467 atgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacg 459565  T
Q  351 ttagtcaatt 360  Q
    ||||||||||    
T  459566 ttagtcaatt 459575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 6681371 - 6681263
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacg 350  Q
    |||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||    
T  6681371 atgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaagtacccccctgaaattaacaaaacttcaactacccccctgaaatt-tcacaacg 6681273  T
Q  351 ttagtcaatt 360  Q
    ||||||||||    
T  6681272 ttagtcaatt 6681263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 27915161 - 27915075
Alignment:
Q  278 gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    |||||| |||||||||||||||| |||  |||  ||||||||||||||||||   || | ||||| ||||| |||||||||||||||||    
T  27915161 gaaattataactttcgtcaaaaaaccc--tgacatttaagaaacttcaaaaaaatccattaaattgtcaaatgttagtcaattaccccc 27915075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 8408267 - 8408156
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-a 347  Q
    ||||||||||||||| |||   ||||||||||||||||| |||| ||||  |||| |||||  || |  |||||||||  |||||||||||||| ||| |    
T  8408267 aaaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatt-tcaca 8408169  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  8408168 acgttagtcaatt 8408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 360
Target Start/End: Complemental strand, 18146553 - 18146441
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaa 347  Q
    ||||| |||||||||| |||   ||||||||||||||||| |||| ||||  |||| |||||  || |  |||||||||  |||||||||||||| |  |    
T  18146553 taaaacgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaattttaca 18146454  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  18146453 acgttagtcaatt 18146441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 39760568 - 39760675
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  39760568 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 39760666  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  39760667 tagtcaatt 39760675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 360
Target Start/End: Original strand, 8159935 - 8160041
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgtt 352  Q
    |||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||    
T  8159935 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaataaaacttcaattacccccctgaaatt-tcacaacgtt 8160033  T
Q  353 agtcaatt 360  Q
    ||||||||    
T  8160034 agtcaatt 8160041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 17526052 - 17526162
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aa 348  Q
    |||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||| ||||  || |  |||||||||  |||||||||||||| ||| ||    
T  17526052 aaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaatt-tcacaa 17526150  T
Q  349 cgttagtcaatt 360  Q
    ||||||||||||    
T  17526151 cgttagtcaatt 17526162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 971352 - 971249
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg--ttagtcaattaccccccttccgt 373  Q
    |||||||||||| |||||||||||| ||   |||||||||||| |||||||||| ||   ||||||| |||||||  ||| |||||||  |||||||| |    
T  971352 ctgaaattgtaattttcgtcaaaaaacct--tgatttttaagagacttcaaaaaacctattgaaattgtcaaacgttttactcaatta--ccccttccat 971257  T
Q  374 ttgttttg 381  Q
    ||||||||    
T  971256 ttgttttg 971249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 6844938 - 6845047
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aac 349  Q
    ||||||||||||| |||   ||| ||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||    
T  6844938 aatgagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaac 6845036  T
Q  350 gttagtcaatt 360  Q
    |||||||||||    
T  6845037 gttagtcaatt 6845047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 26625059 - 26625101
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgattttt 314  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||    
T  26625059 ccccctgaaattgtaactttcgtaaaaaaccctcctgaatttt 26625101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 38482971 - 38483060
Alignment:
Q  271 cccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 360  Q
    ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  38482971 cccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 38483060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 38977552 - 38977646
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||| |||||||||||||  | |||||||||||||||| |||| ||||  ||||| ||||  || |  |||||||||  ||||||||||||||    
T  38977552 taaaataagtaaataggcaattatccccctgaaattgtaagtttcatcaattacccctctgaaattaagaaaacttcaattacccccctgaaatt 38977646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 1144492 - 1144439
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccct 307  Q
    |||||||||| |||  |||||||||||||||||| |||||||||  ||||||||    
T  1144492 gagtaaatagtcaactacccccctgaaattgtaagtttcgtcaattacccccct 1144439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 17526936 - 17526847
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  17526936 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 17526847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 19292226 - 19292315
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||  ||||| |||||||||||| |||||||||  || |||||||  || |  |||||||||  ||||||||||||||    
T  19292226 tgagtaaatagacaattacccctctgaaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattacccccctgaaatt 19292315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 19877767 - 19877679
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||  |||| ||| |||||| |||||||||||||| ||||  ||| ||||   ||||||| |||||||||||||||||    
T  19877767 tgagtaaatagtcaattaccctcctaaaattgcaactttcgtcaaaatccccattgaattttgcaaaacttc-aaaacccccctgaaatt 19877679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 8407380 - 8407487
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   |||| |||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  8407380 tgagtaaatagtcaatttcccctctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 8407478  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  8407479 tagtcaatt 8407487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 9475178 - 9475285
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   || |||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  9475178 tgagtaaatagtcaatttcctccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 9475276  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  9475277 tagtcaatt 9475285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 9587503 - 9587551
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||| |||||||||| |||  |||||||||||||||||| |||||||||    
T  9587503 aaaaagagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 9587551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 11445939 - 11445832
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  | |||||||||||| ||| |||||    
T  11445939 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattatccccctgaaatt-tcacaacgt 11445841  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  11445840 tagtcaatt 11445832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 19293315 - 19293267
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||| ||||||||||||||  ||| |||||||||||||| |||||||||    
T  19293315 aaaacgagtaaataggcaattacctccctgaaattgtaagtttcgtcaa 19293267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 38395380 - 38395487
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||| ||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  38395380 tgagtaaatagtcaatttcccccttgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 38395478  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  38395479 tagtcaatt 38395487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 38396254 - 38396147
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| || |  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  38396254 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 38396156  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  38396155 tagtcaatt 38396147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 474 - 687
Target Start/End: Original strand, 54560253 - 54560468
Alignment:
Q  474 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctc--tctctcttgtttgttaccttcttcaattaataaac 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||    
T  54560253 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctctctctctcttgtttgttaccttcttgaattaatcaac 54560352  T
Q  572 aacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacacca 671  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54560353 tacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaacacca 54560452  T
Q  672 acatcaacatcaacgt 687  Q
    ||||||||||||||||    
T  54560453 acatcaacatcaacgt 54560468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 492 - 687
Target Start/End: Complemental strand, 50838139 - 50837942
Alignment:
Q  492 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctct--tgtttgttaccttcttcaattaataaacaacaaccctttggaattc 589  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||    
T  50838139 aacaacatcatcatcatcaacctcacacactttctaatgattctctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaattc 50838040  T
Q  590 atcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacgt 687  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  50838039 atcaacaacagaatgaataacagaaaagatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaacaccaacatcaacagcaacgt 50837942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 495 - 686
Target Start/End: Original strand, 47470944 - 47471134
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcatcaa 594  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  47470944 aacaacatcatcatcaacatcacacactttataatgattctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaa-tcatcaa 47471042  T
Q  595 caacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||    
T  47471043 caacaaaatgaataatagaaaagatcatgaacttgttggaaaaagaacaaggtttataatgaatagcatgaacaacaacatcaacatcaacg 47471134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 54560032 - 54560175
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54560032 tgagtgaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccatgaaattatcaaacgtt 54560131  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54560132 agtcaattaccccccttccgtttgttttggctgttaagtgacta 54560175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 249 - 396
Target Start/End: Complemental strand, 50838399 - 50838253
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  50838399 aaaaagagtgaataggcaaaaatccccctgaaattgtaactttcgtcaaaaacccccctaatttttaagaaacttcaaaaactcccctgaaattatcaaa 50838300  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  50838299 cgttagtcaattacccccc-tccgtttgttttggctgttaaatgacta 50838253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 54560954 - 54560812
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||    
T  54560954 atgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgt 54560855  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  54560854 tagtcaattacccccc-tccgtttgttttggctgttaaatgact 54560812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 254 - 395
Target Start/End: Original strand, 1576486 - 1576626
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  1576486 gagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtta 1576585  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||| |||||||||||||||| |||| |||||    
T  1576586 gtcaattacccccc-tccgtttgttttggctattaaatgact 1576626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 254 - 395
Target Start/End: Complemental strand, 1577645 - 1577506
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||    
T  1577645 gagtaaatagtcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaac-cccctgaaattgacaaacgtta 1577547  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  1577546 gtcaattacccccc-tccgtttgttttggctgttaaatgact 1577506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 252 - 396
Target Start/End: Complemental strand, 47471613 - 47471470
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  47471613 atgagtaaataggcaaaaaaccccttgaaattgtagctttcgtcaaaaccccccctgatttttaggaaacttcaaaaacccccctgaaattgccaaacgt 47471514  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||||||| || |||||||||||||||||| ||||||    
T  47471513 tagtcaattacccccc-tctgtttgttttggctgttaaatgacta 47471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 259 - 396
Target Start/End: Original strand, 43546371 - 43546507
Alignment:
Q  259 aataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaa 358  Q
    ||||||||||||| || ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  43546371 aataggcaaaaactcctctgaaattgtaactttcgtcaaaaatcttcctgatttttaagaaacttcaaaaacccctctgaaattatcaaacgtcagtcaa 43546470  T
Q  359 ttaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  43546471 ttacccccc-tccgtttgttttggctgttaaatgacta 43546507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 249 - 395
Target Start/End: Original strand, 50837455 - 50837599
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||  ||||    
T  50837455 aaaaagagtgaataggcaaaaatccccctgaaattgtaactttcgtcaaaaacccccctgatttttagaaaatttcaaaaa-ccccctgaaattgacaaa 50837553  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  50837554 cgttagtcaattacccccc-tccgtttgttttggctgttaaatgact 50837599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 254 - 396
Target Start/End: Original strand, 35942098 - 35942241
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||  |||||| ||||||||||||||||||||||| | |||||||||||||||||||  ||||| ||||||||||| ||||||||||    
T  35942098 gagtgaataggcaaaactccccctaaaattgtaactttcgtcaaaaactctcctgatttttaagaaactt-taaaactcccctgaaattgtcaaacgtta 35942196  T
Q  354 gtcaattacccc--ccttccgtttgttttggctgttaagtgacta 396  Q
    ||||| ||||||  || ||| ||||||||||||||||| ||||||    
T  35942197 gtcaactaccccctccctccatttgttttggctgttaaatgacta 35942241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 50382853 - 50382749
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 375  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||  |||||||||||||||||||||||||| |||||    
T  50382853 ctgaaatcgtaactttcgtcaaaaactcccctgacttttaagaaacttcaaacacccccatgaaatggtcaaacgttagtcaattacccccctt-cgttt 50382755  T
Q  376 gttttg 381  Q
    ||||||    
T  50382754 gttttg 50382749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 368
Target Start/End: Original strand, 11032382 - 11032501
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    ||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| ||||     
T  11032382 aaaatgagtaaatagtcaattacccccctgaaattttaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaag 11032481  T
Q  349 cgttagtcaattacccccct 368  Q
    |||  |||||||||||||||    
T  11032482 cgtctgtcaattacccccct 11032501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 52946366 - 52946480
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  52946366 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 52946465  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  52946466 gtcaattacccccct 52946480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 254 - 381
Target Start/End: Complemental strand, 31800499 - 31800374
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| ||||||||||||| |||| |||||||||||||||||||||||  ||| |||||||||||||||||| ||||| ||  | ||||| | ||||||||    
T  31800499 gagtgaataggcaaaaactcccccgaaattgtaactttcgtcaaaaaatcccatgatttttaagaaacttctaaaactcctataaaattgtgaaacgtta 31800400  T
Q  354 gtcaattaccccccttccgtttgttttg 381  Q
    |||| ||||||||  |||||||||||||    
T  31800399 gtcagttaccccc--tccgtttgttttg 31800374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 249 - 368
Target Start/End: Complemental strand, 1137728 - 1137609
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||| ||||   |||  |||||| ||||||||||||| ||||     
T  1137728 aaaatgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaccccccctgaaattgtcaag 1137629  T
Q  349 cgttagtcaattacccccct 368  Q
    |||  |||||||||||||||    
T  1137628 cgtctgtcaattacccccct 1137609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 49726101 - 49725987
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||      
T  49726101 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtct 49726002  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  49726001 gtcaattacccccct 49725987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 52118378 - 52118264
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||| ||| ||||   |||  |||||||||||||||||||| |||| |||      
T  52118378 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 52118279  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  52118278 gtcaattacccccct 52118264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 50381851 - 50381986
Alignment:
Q  253 tgagtaaataggcaaaaaccc-ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||||||||||||||||    ||| ||||||||| | || |||||||||||| ||||  ||||||||||||||||  |||| |||||||| ||||||||    
T  50381851 tgagtaaataggcaaaaaaaaaccccgaaattgtagcatttgtcaaaaacccctctgacatttaagaaacttcaaat-cccctctgaaattgtcaaacgt 50381949  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||||||||||||||| || ||||||||||||||||||    
T  50381950 tagtcaattacccccc-tctgtttgttttggctgttaa 50381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 249 - 368
Target Start/End: Complemental strand, 52947906 - 52947788
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||||||||| |||  ||||||||||||||||||||||||||||||||||| |||| |||||  |||  |||||||| ||||||||||| ||||     
T  52947906 aaaaagagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccctctgaattttacaaaatgtcaaaaac-cccctgaaattgtcaag 52947808  T
Q  349 cgttagtcaattacccccct 368  Q
    |||  |||||||||||||||    
T  52947807 cgtctgtcaattacccccct 52947788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 1136240 - 1136350
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||  |||      
T  1136240 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcacgcgtct 1136339  T
Q  354 gtcaattaccc 364  Q
    |||||||||||    
T  1136340 gtcaattaccc 1136350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 47470763 - 47470835
Alignment:
Q  323 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  47470763 tcaaaaatccccctgaaattatcaaacgtcagtcaattacccccc-tccgtttgttttggctgttaaatgacta 47470835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 253 - 394
Target Start/End: Complemental strand, 28539491 - 28539353
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| |||||||||||||| || | |||| || |||||  | ||||| || |||||||||||||||||||| ||||||||| | ||||| | |||||||    
T  28539491 tgagtcaataggcaaaaaccaccataaaatcgtgacttttataaaaaatcctcctgatttttaagaaacttc-aaaacccccataaaattgttaaacgtt 28539393  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgac 394  Q
    ||||||||| || |  ||||||||||||||||||||| ||||    
T  28539392 agtcaattatcctc--tccgtttgttttggctgttaaatgac 28539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 279 - 389
Target Start/End: Complemental strand, 35942887 - 35942778
Alignment:
Q  279 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccct-gaaattatcaaacgttagtcaattaccccccttccgtttgt 377  Q
    ||||||||| |||||||||||| |||| ||| ||||| |||||||||||||  ||||| |||||| | |||||||||||||||||||||| ||| |||||    
T  35942887 aaattgtaattttcgtcaaaaatcccc-tgacttttatgaaacttcaaaaaaaccccttgaaattgttaaacgttagtcaattacccccc-tccatttgt 35942790  T
Q  378 tttggctgttaa 389  Q
    ||||| ||||||    
T  35942789 tttggttgttaa 35942778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 272 - 366
Target Start/End: Original strand, 51149983 - 51150077
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    ||||||||||||||||||||||||||||||||| |||| ||||   |||  ||||||||||| |||||||| |||| |||  |||||||||||||    
T  51149983 ccccctgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtctgtcaattaccccc 51150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 31799469 - 31799603
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| |||||||||| || | | ||||||| |||||||||||||||| | |||||| |||||||||||||  || |     |||||||| ||||| |||    
T  31799469 tgagtgaataggcaaagacactcatgaaattataactttcgtcaaaaaactccctgacttttaagaaacttagaagaaaaaactgaaattgtcaaatgtt 31799568  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaa 389  Q
    ||||||||||||||  ||||||||||||| |||||||    
T  31799569 agtcaattaccccc--tccgtttgttttgactgttaa 31799603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 368
Target Start/End: Complemental strand, 34651506 - 34651382
Alignment:
Q  245 atttaaaat-gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatta 343  Q
    ||||||||| |||||||||| |||  ||| ||||||||||||||||||  |||||||||||||||| ||||   |||  ||||||||||||||||||||     
T  34651506 atttaaaatagagtaaatagtcaattacctccctgaaattgtaacttttatcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattg 34651407  T
Q  344 tcaaacgttagtcaattacccccct 368  Q
    ||||   |  |||||||||||||||    
T  34651406 tcaagtttctgtcaattacccccct 34651382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 368
Target Start/End: Original strand, 34649866 - 34649989
Alignment:
Q  245 atttaaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattat 344  Q
    |||| |||||||||||||| |||  |||||| |||||||||||||||||| |||||| ||||||| ||||   |||  ||||||| | |||||||||| |    
T  34649866 attttaaatgagtaaatagtcaattacccccttgaaattgtaactttcgtaaaaaactcccctgaattttgcaaaatgtcaaaaatctccctgaaattgt 34649965  T
Q  345 caaacgttagtcaattacccccct 368  Q
    ||| |||  |||||||| ||||||    
T  34649966 caagcgtctgtcaattatccccct 34649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 11033877 - 11033763
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||| ||||||||||||||||||||||||  ||||||| ||||   |||  |||||||  ||||||||||| |||| |||      
T  11033877 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaatcccctgaattttgtaaaatgtcaaaaaaacccctgaaattgtcaagcgtct 11033778  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  11033777 gtcaattacccccct 11033763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 40954663 - 40954759
Alignment:
Q  273 cccctgaaattgtaactttcgtcaaaaac-ccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||||| ||||||||  |||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  40954663 cccctgaaattgtaacttttgtcaaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 40954759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 32610819 - 32610929
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  ||| |||| ||||||||| |||||||||||||| |||||| ||||   |||| |||||||| ||| ||||||| |||| |||      
T  32610819 gagtaaatagtcaactacctccctaaaattgtaattttcgtcaaaaacctccctgaattttgcaaaacgtcaaaaactcccatgaaattttcaagcgtct 32610918  T
Q  354 gtcaattaccc 364  Q
    |||||||||||    
T  32610919 gtcaattaccc 32610929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 33831660 - 33831734
Alignment:
Q  277 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||||| ||||||||||||||||| ||  ||| |||||||| ||||||||||||| | ||||||| ||||||||    
T  33831660 tgaaattataactttcgtcaaaaactcctttgacttttaagacacttcaaaaaccctcgtgaaattgtcaaacgt 33831734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 36026967 - 36027057
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  | ||||||||||||    
T  36026967 atgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaatt 36027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 10657254 - 10657146
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacg 350  Q
    |||||||||||| |||   ||||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||    
T  10657254 atgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacg 10657156  T
Q  351 ttagtcaatt 360  Q
    ||||||||||    
T  10657155 ttagtcaatt 10657146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 43640785 - 43640890
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  ||||| || |||||||| |||||||||||||  ||||||| ||||   ||||||||||||   |||||||||| ||||||||     
T  43640785 tgagtaaatagtcaattaccccactaaaattgtagctttcgtcaaaaaaacccctgaattttgcaaaacttcaaaaagaaccctgaaattgtcaaacgtc 43640884  T
Q  353 agtcaa 358  Q
    ||||||    
T  43640885 agtcaa 43640890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 49964678 - 49964791
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  | ||||||||||||||||||||||| ||||| |||||||| ||||   |||| |||||| |||| || ||||| |||| |||      
T  49964678 gagtaaatagtcaattatccccctgaaattgtaactttcgttaaaaaaccccctgaattttgcaaaacgtcaaaaccccctctaaaattgtcaagcgtct 49964777  T
Q  354 gtcaattacccccc 367  Q
    ||||||||| ||||    
T  49964778 gtcaattactcccc 49964791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 1033927 - 1033840
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  |||||||||||||||||| |||||||||  | ||||||||| || |  |||||||||  ||||||||||||||    
T  1033927 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaatta-ccccctgatattaacaaaacttcaattacccccctgaaatt 1033840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 35234839 - 35234927
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||| |||  |||||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  35234839 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 35234927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 47470722 - 47470778
Alignment:
Q  254 gagtaaataggcaaaaa-cccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  47470722 gagtgaatgggcaaaaatcccccctgaaattgtaactttcgtcaaaaatccccctga 47470778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 49724626 - 49724681
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||||| ||||    
T  49724626 gagtaaatagtcaattacccccctgaaattgtaattttcgtcaaaaaccccactga 49724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 52116926 - 52116961
Alignment:
Q  270 acccccctgaaattgtaactttcgtcaaaaaccccc 305  Q
    ||||||||||||||||||||||||||||||||||||    
T  52116926 acccccctgaaattgtaactttcgtcaaaaaccccc 52116961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 35154772 - 35154662
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    |||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||| ||  |||||||||||||| |  |||    
T  35154772 aaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaactttaattacccccctgaaattttacaac 35154673  T
Q  350 gttagtcaatt 360  Q
    |||||||||||    
T  35154672 gttagtcaatt 35154662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 363
Target Start/End: Complemental strand, 43643902 - 43643792
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||  |||  ||||| ||||||||||| |||| |||||||| || ||||| ||||   |||||||||||||| |  ||||||| |||||| ||    
T  43643902 tgagtaaataatcaattacccctctgaaattgtagcttttgtcaaaaatcctcctgaattttgcaaaacttcaaaaacctctttgaaattgtcaaacatt 43643803  T
Q  353 agtcaattacc 363  Q
    |||||| ||||    
T  43643802 agtcaaatacc 43643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 11653910 - 11653821
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||| |||||  |||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  11653910 tgagtaaatgggcaattacccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 11653821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 3370885 - 3370777
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    |||||    
T  3370885 atgagtaaatagtcaatttcccccctgaaattgtaaatttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcttaacgt 3370786  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  3370785 tagtcaatt 3370777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 13342474 - 13342367
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  13342474 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 13342376  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  13342375 tagtcaatt 13342367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 368
Target Start/End: Original strand, 25580806 - 25580897
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||   || ||| ||||   |||| || ||||||||||||||||| |||| |||  |||||||||||||||    
T  25580806 ctgaaattgtaactttcgtcaaaaatttccttgaattttgcaaaacgtc-aaaacccccctgaaattgtcaagcgtctgtcaattacccccct 25580897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 334
Target Start/End: Original strand, 55455882 - 55455962
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaaccccc 334  Q
    |||||||||| |||  ||||||||||||||||| |||||| ||||| | ||| ||| ||||   |||||||||||||||||    
T  55455882 gagtaaatagtcaattacccccctgaaattgtagctttcgccaaaatctcccttgaattttgcaaaacttcaaaaaccccc 55455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 6757049 - 6757006
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||||  |||||||||||||||||| |||||||||    
T  6757049 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 6757006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 32951106 - 32951015
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  | ||||||||| || |  |||||||||  ||||||||||||||    
T  32951106 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgatattaacaaaacttcaattacccccctgaaatt 32951015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 29587095 - 29587141
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||||||||||||||||  |||| ||||||||||||| |||||||||    
T  29587095 aatgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa 29587141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 40066681 - 40066635
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||| |||  |||||||||||||||||| |||||||||    
T  40066681 aatgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 40066635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 45078348 - 45078438
Alignment:
Q  270 acccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 360  Q
    |||||||||||||||||| |||| || |  ||||||||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  45078348 acccccctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 45078438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 45252579 - 45252529
Alignment:
Q  248 taaaatgagtaaataggcaaaaacc-cccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||||||||||  ||| ||||||||||||||| |||||||||    
T  45252579 taaaatgagtaaataggcaattacctcccctgaaattgtaagtttcgtcaa 45252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 54627022 - 54627111
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||  ||||| |||||||||||| |||||||||  ||||||||||  || |  |||||||||  |||||| |||||||    
T  54627022 tgagtaaatagtcaattacccctctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccttgaaatt 54627111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 6756753 - 6756713
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgt 294  Q
    ||||||||||||||  |||||||||||||||||| ||||||    
T  6756753 gagtaaataggcaattacccccctgaaattgtaagtttcgt 6756713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 318 - 366
Target Start/End: Complemental strand, 25582470 - 25582422
Alignment:
Q  318 aaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    |||| |||||||||||||||||||| |||| |||  |||||||||||||    
T  25582470 aaacgtcaaaaacccccctgaaattgtcaagcgtctgtcaattaccccc 25582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 29491998 - 29492086
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||| |||   ||||||||||||||||  |||||||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  29491998 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 29492086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 31585379 - 31585335
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||||||||||||||  |||||| ||||||||||| |||||||||    
T  31585379 tgagtaaataggcaattacccccttgaaattgtaagtttcgtcaa 31585335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 52170924 - 52171035
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-a 347  Q
    ||||||||||||||| |||    |||| ||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |    
T  52170924 aaaatgagtaaatagtcaatttaccccttgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcaca 52171022  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  52171023 acgttagtcaatt 52171035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 474 - 687
Target Start/End: Original strand, 14790893 - 14791112
Alignment:
Q  474 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgatt------ctctctctcttgtttgttaccttcttcaattaat 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  14790893 tccagaaaaaatttaagaaacaacaacatcatcatcaacatcacacactttctaatgattatctctctctctctcttgtttgttaccttcttcaattaat 14790992  T
Q  568 aaacaacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaac 667  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14790993 caacaacaaccctttggaattcatcaacaacagaaagaataacagaaaatatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaac 14791092  T
Q  668 accaacatcaacatcaacgt 687  Q
    ||||||||||||||||||||    
T  14791093 accaacatcaacatcaacgt 14791112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 249 - 396
Target Start/End: Original strand, 14790667 - 14790814
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14790667 aaaaagagtaaataggcaaaaaaccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 14790766  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14790767 cgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 14790814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 495 - 686
Target Start/End: Complemental strand, 20112160 - 20111970
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcatcaa 594  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  20112160 aacaacatcatcatcaacatcacacactttataatgattctctctct--tgtttgttaccttcttgaattaatcaacagcaaccctttggaattcatcaa 20112063  T
Q  595 caacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaag-gttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||| |||||    
T  20112062 caacaaaatgaataatagaaaagatcatgaacttgttggaaaaagaacaaggttttatgatgaatagcatgaacaacaacatcaacaacaacg 20111970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 7 - 203
Target Start/End: Complemental strand, 11755098 - 11754905
Alignment:
Q  7 acatcctatatgttcgatcgatgaatcgccagaaaaacaggtaattagggttttaaaatccaacatgatgnnnnnnnnnnnnnnngagagaaaaatccaa 106  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||                |||||||||||||||    
T  11755098 acatcctatatgttcgatcgatgaatcacaagaaagacgggtaattagggttttaaaatccaacatgat---attatttttttttgagagaaaaatccaa 11755002  T
Q  107 catgatataaaatcccgtgtaaaagaaatgtatagtccagtaactcttggtttaatgatatacacgggactctttgcatgatactttctttaaaaat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  11755001 catgatataaaatcccgtgtaaaagaaatgtatagtccagtaactcttggtttaatgatatacacgagactttttgcataatactttctttaaaaat 11754905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 253 - 395
Target Start/End: Complemental strand, 14791590 - 14791449
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||    
T  14791590 tgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaaaccccctgaaattgacaaacgtt 14791491  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  14791490 agtcaattacccccc-tccgtttgttttggctgttaaatgact 14791449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 254 - 396
Target Start/End: Complemental strand, 20112411 - 20112271
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20112411 gagtgaataggcaaaaacccctctgaaattgtaactttcgtaaaaaaaacccctgatttttaagaaacttcaaaaaccccactgaaattatcaaacgtta 20112312  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||||  ||||||||||||||||||||| ||||||    
T  20112311 gtcaattaccccc--tccgtttgttttggctgttaaatgacta 20112271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 251 - 389
Target Start/End: Original strand, 20111489 - 20111625
Alignment:
Q  251 aatgagtaaataggcaaaaacccccct-gaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    ||||||||||||||||||||| ||||| | ||||||| ||||||||||||  |||||| ||||||| |||| |||||||| || ||| ||||| ||||||    
T  20111489 aatgagtaaataggcaaaaactccccttgtaattgtagctttcgtcaaaa--ccccctaatttttaggaaatttcaaaaatcctcctaaaattgtcaaac 20111586  T
Q  350 gttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
     ||||||||||||||||| |||||||||||| ||||||||    
T  20111587 attagtcaattacccccc-tccgtttgttttagctgttaa 20111625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 366
Target Start/End: Original strand, 14864971 - 14865084
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||     
T  14864971 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtc 14865070  T
Q  353 agtcaattaccccc 366  Q
     |||||||||||||    
T  14865071 tgtcaattaccccc 14865084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 35124742 - 35124626
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||    
T  35124742 atgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaatccccctgaaattgtcaagcgt 35124643  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  35124642 ctgtcaattacccccct 35124626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 767719 - 767605
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  || ||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  767719 gagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 767620  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  767619 gtcaattacccccct 767605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 32672308 - 32672404
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  32672308 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 32672404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 11681683 - 11681568
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||| ||| ||||   |||  |||||||||||||||||||| | || |||     
T  11681683 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaacccccctgaaattgttaagcgtc 11681584  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  11681583 tgtcaattacccccct 11681568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 11680170 - 11680284
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||| |||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  11680170 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11680269  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  11680270 gtcaattacccccct 11680284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 27243105 - 27242993
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||| ||||||||||||||||||||| ||| ||||   |||  |||||||| ||||||||||| |||| |||      
T  27243105 gagtaaatagtcaattacccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgtcc 27243006  T
Q  354 gtcaattaccccc 366  Q
    |||||||||||||    
T  27243005 gtcaattaccccc 27242993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 27254680 - 27254568
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||| ||||||||||||||||||||| ||| ||||   |||  |||||||| ||||||||||| |||| |||      
T  27254680 gagtaaatagtcaattacccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgtcc 27254581  T
Q  354 gtcaattaccccc 366  Q
    |||||||||||||    
T  27254580 gtcaattaccccc 27254568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 35123254 - 35123350
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||| ||||||    
T  35123254 ccccctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattatccccct 35123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 21190065 - 21190155
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    |||||||| ||||||| |||||||  |||| ||| ||||||| ||||| ||||| | || |||||||||||||||||||||||||||||||    
T  21190065 ctgaaattataacttttgtcaaaagaccccttgaattttaaggaactttaaaaaactccatgaaattatcaaacgttagtcaattaccccc 21190155  T

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Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 32219538 - 32219650
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||| ||||||||||| |||||||||||| | |||| | ||||   |||||||||| |||||||||||||| |||| |||      
T  32219538 gagtaaatagtcaattacccccttgaaattgtaattttcgtcaaaaatctccctaaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtct 32219637  T
Q  354 gtcaattaccccc 366  Q
    |||||||||||||    
T  32219638 gtcaattaccccc 32219650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 32673774 - 32673670
Alignment:
Q  270 acccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccctt 369  Q
    |||| ||| ||||||||||||||||||||||   |||||| ||||   |||  |||||||||||||||||||| |||| |||  ||||||||||||||||    
T  32673774 accctcctcaaattgtaactttcgtcaaaaatttccctgaattttgcaaaatatcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccctt 32673675  T
Q  370 ccgtt 374  Q
    |||||    
T  32673674 ccgtt 32673670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 14866222 - 14866109
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaac-ccccctgaaattatcaaacgtt 352  Q
    |||||||||| |||  ||||||||||||||||||||||| ||||||| |||||||| ||||   |||  |||||||| ||| |||||||| |||| |||     
T  14866222 gagtaaatagtcaattacccccctgaaattgtaactttcttcaaaaatccccctgaattttgcaaaatgtcaaaaactccctctgaaattgtcaagcgtc 14866123  T
Q  353 agtcaattaccccc 366  Q
     |||||||||||||    
T  14866122 tgtcaattaccccc 14866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 517 - 588
Target Start/End: Original strand, 18308842 - 18308911
Alignment:
Q  517 cacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaatt 588  Q
    |||||||| |||||||||||  |||||||||||||||| |||| ||||||| ||||||||| ||||||||||    
T  18308842 cacactttttaatgattctc--tctcttgtttgttaccatcttgaattaatcaacaacaactctttggaatt 18308911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 12128177 - 12128081
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||| |||||||||||||||||||||  | ||||| ||||   |||||||||| || ||| ||||||| |||| |||  |||||||||||||||    
T  12128177 ccccctggaattgtaactttcgtcaaaaattctcctgaattttgcaaaacttcaaatactcccttgaaattgtcaagcgtctgtcaattacccccct 12128081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 26544581 - 26544659
Alignment:
Q  311 ttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtc-aattaccccccttccgtttgttttggctgttaa 389  Q
    ||||||||||||| |||||| ||| ||||||| ||||||||||||| ||||| ||||| || ||||||||||||| ||||    
T  26544581 ttttaagaaacttgaaaaacacccttgaaattgtcaaacgttagtcaaattaaccccc-tctgtttgttttggctattaa 26544659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 38713360 - 38713451
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||||||  |||||||| ||||||||| |||||||||  |||| |||||  || |  |||||||||  ||||||||||||||    
T  38713360 aatgagtaaataggcaattacccccctcaaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatt 38713451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 14054048 - 14053958
Alignment:
Q  270 acccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 360  Q
    |||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  14054048 acccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 14053958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 356056 - 355945
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-a 347  Q
    |||| |||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |    
T  356056 aaaaagagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcaca 355958  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  355957 acgttagtcaatt 355945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 39132733 - 39132821
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||| |||||||||    
T  39132733 gagtaaataggcaattacccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctcctgaaatt 39132821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 45105524 - 45105567
Alignment:
Q  335 ctgaaattatcaaacgttagtcaattaccccccttccgtttgttt 379  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  45105524 ctgaaattgtcaaacgttagtcaattacccccc-tccgtttgttt 45105567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 31127775 - 31127684
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  31127775 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 31127684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 27241619 - 27241661
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgattttt 314  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||    
T  27241619 ccccctaaaattgtaactttcgtcaaaaactcccctgaatttt 27241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 27247492 - 27247534
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgattttt 314  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||    
T  27247492 ccccctaaaattgtaactttcgtcaaaaactcccctgaatttt 27247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 28775997 - 28776106
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aac 349  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  |||||||| |  || |  |||||||||  |||||||||||||| ||| |||    
T  28775997 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacccccctgaaatt-tcacaac 28776095  T
Q  350 gttagtcaatt 360  Q
    |||||||||||    
T  28776096 gttagtcaatt 28776106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 36338571 - 36338521
Alignment:
Q  311 ttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatta 361  Q
    ||||||||||||||||||||||   | ||||| ||||||||||||||||||    
T  36338571 ttttaagaaacttcaaaaacccttataaaattgtcaaacgttagtcaatta 36338521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 36469265 - 36469176
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||||  |||||| ||||||||||| |||| ||||  ||||||||||  || |  |||||||||| |||||| |||||||    
T  36469265 atgagtaaataggcaattaccccc-tgaaattgtaagtttcatcaattacccccctgaaattaagaaaacttcaaatacccccttgaaatt 36469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 9737246 - 9737137
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    ||||||||||||| |||  | |||||||||||||||| |||| ||||  |||||| |||  || |  |||||||||  |||||||||||||| |  ||||    
T  9737246 aatgagtaaatagtcaattaaccccctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaactacccccctgaaattttacaacg 9737147  T
Q  351 ttagtcaatt 360  Q
    ||| ||||||    
T  9737146 ttaatcaatt 9737137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 41578187 - 41578098
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||   ||||||||||||||||| |||||||||  | ||||||||  || |  |||||||||  ||||||||||||||    
T  41578187 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattacccccctgaaatt 41578098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 10443057 - 10443164
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||| ||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  10443057 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 10443155  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  10443156 tagtcaatt 10443164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 15565713 - 15565625
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||| |||  |||||| ||||||||||| ||| |||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  15565713 gagtaaatagtcaattacccccttgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 15565625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 1e-95; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 485 - 687
Target Start/End: Original strand, 15347663 - 15347867
Alignment:
Q  485 tttaagaaacaacaacatcatcatcaacatcacacactttctaatgattctc--tctctcttgtttgttaccttcttcaattaataaacaacaacccttt 582  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15347663 tttaagaaacaacaacatcatcatcaacatcgcacactttctaatgattctctctctctcttgtttgttaccttcttaaattaatcaacaacaacccttt 15347762  T
Q  583 ggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatc 682  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15347763 ggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaacaccaacatcaacatc 15347862  T
Q  683 aacgt 687  Q
    |||||    
T  15347863 aacgt 15347867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 492 - 687
Target Start/End: Complemental strand, 17732698 - 17732499
Alignment:
Q  492 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctct----tgtttgttaccttcttcaattaataaacaacaaccctttggaat 587  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||||| ||||||| |||||||||||||||||||    
T  17732698 aacaacatcatcatcatcaacctcacacactttctaatgattctctctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaat 17732599  T
Q  588 tcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacgt 687  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  17732598 tcatcaacaacagaatgaataacagaaaagatcatgaacttgttggaaaaagaacaagggttatgatgaatagcatgaacaccaacatcaacagcaacgt 17732499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 492 - 684
Target Start/End: Complemental strand, 6009313 - 6009115
Alignment:
Q  492 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctct------tgtttgttaccttcttcaattaataaacaacaaccctttgga 585  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||| ||||||| |||||||||||||||||    
T  6009313 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttgga 6009214  T
Q  586 attcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaa 684  Q
    |||||||||||||| || ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6009213 attcatcaacaacaaaatgaataacagaaaagatcgtggacttgttggaaaaagaacaagggttatgatgaatagcatgaacaccaacatcaacatcaa 6009115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 252 - 396
Target Start/End: Original strand, 15347430 - 15347574
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15347430 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 15347529  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15347530 tagtcaattaccccccttccgtttgttttggctgttaagtgacta 15347574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 495 - 686
Target Start/End: Original strand, 30709739 - 30709934
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctc----tctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattca 590  Q
    |||||||||||||||||||||||||||||| |||||||||||    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  30709739 aacaacatcatcatcaacatcacacactttataatgattctctctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaattca 30709838  T
Q  591 tcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    ||||||||| || |||||| ||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||| |||||    
T  30709839 tcaacaacaaaatgaataatagaaaagatcatgaacttgtttgaaaaagaacaaggtttatgatgaatagcatgaacaacaacatcaacagcaacg 30709934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 250 - 396
Target Start/End: Complemental strand, 17732955 - 17732810
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17732955 aaatgagtgaataggcaaaaccccccttgaaattgtaactttcgtcaaaaaaccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 17732856  T
Q  350 gttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  17732855 gttagccaattacccccc-tccgtttgttttggctgttaaatgacta 17732810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 30709490 - 30709630
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||     
T  30709490 tgagtgaataggcaaaaacccctctgaaattgtaactttcgtcaaaaatccccctgatttttaagaaacttcaaaaacgcctctgaaattatcaaacgtc 30709589  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||| |||||||||  ||||||||||||||||||||| ||||||    
T  30709590 agtc-attaccccc--tccgtttgttttggctgttaaatgacta 30709630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 252 - 395
Target Start/End: Original strand, 17732013 - 17732155
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||  ||| |||||||| ||||||||||||  |||||||    
T  17732013 atgagtaaataggcaaaaacccccctgaaattgtagttttcgtcaaaaatccccctgatttttagaaaatttcaaaaaaccccctgaaattgacaaacgt 17732112  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  17732113 tagtcaattacccccc-tccgtttgttttggctgttaaatgact 17732155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 249 - 396
Target Start/End: Complemental strand, 30710418 - 30710273
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  30710418 aaaaagagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaac-cccctgaaattgccaaa 30710320  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||| ||||| || |||||||||||||||||| ||||||    
T  30710319 cgttagtcaatta-cccccatctgtttgttttggctgttaaatgacta 30710273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 251 - 389
Target Start/End: Complemental strand, 15348334 - 15348198
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||  ||||||    
T  15348334 aatgagtaaataggcagaaacccccctgaaattgtagctttcgtcaaaaatcccc-tgatttttaggaaacttcaaaaaaccccctgaaattgacaaacg 15348236  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15348235 ttagtcaattac-ccccttccgtttgttttggctgttaa 15348198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 259 - 396
Target Start/End: Complemental strand, 6009558 - 6009422
Alignment:
Q  259 aataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaa 358  Q
    ||||||||||||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6009558 aataggcaaaaacccccttgaaattataactttcgtcaaaaactttcctgatttttaagaaacttcaaaaactcccctgaaattatcaaacgttagtcaa 6009459  T
Q  359 ttaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||| ||| | ||||||||||||||||||||| ||||||    
T  6009458 ttatccctc-tccgtttgttttggctgttaaatgacta 6009422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 254 - 395
Target Start/End: Original strand, 6008641 - 6008781
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||  |||||||||    
T  6008641 gagtaaataggcaaaaaaacccctgaaattgtagctttcgtcaaaaacctccctgatttttaggaaacttcaaaaagccccctgaaattgacaaacgtta 6008740  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||| ||||||| ||| ||||||||||||||||| |||||    
T  6008741 gtcaatcacccccc-tccatttgttttggctgttaaatgact 6008781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 10917859 - 10917973
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  10917859 gagtaaatagtcaatcacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 10917958  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  10917959 gtcaattacccccct 10917973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 4137673 - 4137769
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  4137673 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 4137769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 1387706 - 1387596
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||| ||||||| |||| |||      
T  1387706 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccttgaaattgtcaagcgtct 1387607  T
Q  354 gtcaattaccc 364  Q
    |||||||||||    
T  1387606 gtcaattaccc 1387596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 4139029 - 4138916
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||||||| |||| |||      
T  4139029 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtcg 4138931  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  4138930 gtcaattacccccct 4138916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 10919388 - 10919272
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  || ||||||||||||||||||||||||||||||| | ||| ||||   |||  |||||||||||||||||||| |||| |||    
T  10919388 atgagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaacccacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 10919289  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  10919288 ctgtcaattacccccct 10919272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 1378455 - 1378568
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  ||||  |||||||||||||||||||||||||||||| ||| ||||   |||  ||||||| |||||||||||| |||| |||      
T  1378455 gagtaaatagtcaattacccttctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtct 1378553  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  1378554 gtcaattacccccct 1378568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 1386203 - 1386316
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  ||||  |||||||||||||||||||||||||||||| ||| ||||   |||  ||||||| |||||||||||| |||| |||      
T  1386203 gagtaaatagtcaattacccttctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtct 1386301  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  1386302 gtcaattacccccct 1386316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 23075436 - 23075347
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||||  |||||||| ||||||||| |||||||||  ||||||||||  || || |||||||||  ||||||||||||||    
T  23075436 tgagtaaataggcaattacccccctaaaattgtaagtttcgtcaattacccccctgaaattaaaaaaacttcaattacccccctgaaatt 23075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 8812929 - 8812840
Alignment:
Q  271 cccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 360  Q
    ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||| |||||||||||||| ||| ||||||||||||||    
T  8812929 cccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaaatacccccctgaaatt-tcacaacgttagtcaatt 8812840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 389
Target Start/End: Original strand, 1792644 - 1792753
Alignment:
Q  279 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccc-tgaaattatcaaacgttagtcaattaccccccttccgtttgt 377  Q
    ||||||||||||| |||||||| |||| ||| ||  ||||| ||||||||||||||| | ||||| |||| ||||  |||||||  |||| || ||||||    
T  1792644 aaattgtaacttttgtcaaaaatccccttgacttcaaagaatcttcaaaaaccccccataaaattgtcaagcgttgctcaatta--ccccatctgtttgt 1792741  T
Q  378 tttggctgttaa 389  Q
    |||||| |||||    
T  1792742 tttggcagttaa 1792753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 14394690 - 14394778
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 360  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| |  ||||||||||||||    
T  14394690 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaatt 14394778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 5430189 - 5430275
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaa 339  Q
    |||||||||||||||  || ||||||||||||||| |||| ||||  |||| |||||  || || |||||||||  |||||||||||    
T  5430189 tgagtaaataggcaattactcccctgaaattgtaagtttcatcaattaccctcctgaaattaaaaaaacttcaattacccccctgaa 5430275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 23074300 - 23074342
Alignment:
Q  255 agtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||||||||||||  |||||||||||||||||| |||||||||    
T  23074300 agtaaataggcaattacccccctgaaattgtaagtttcgtcaa 23074342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 6e-82; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 492 - 686
Target Start/End: Complemental strand, 47445660 - 47445466
Alignment:
Q  492 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcat 591  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  47445660 aacaacaacatcatcatcaacatcacacattttctaatgattctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaattcat 47445561  T
Q  592 caacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||| |||||    
T  47445560 caacaacagaatgaataacagaaaaaatcatgaacttgttggaaaaagaacaaggtttataatgaatagcatgaacaacaacatcaacagcaacg 47445466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 249 - 389
Target Start/End: Original strand, 47444983 - 47445122
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||| ||||||| |||||    
T  47444983 aaaaggagtaaatagccaaaaaaccccctgaaattgtagctttcgtcaaaaccccccctgattttcaggaaacttcaaaaacccccatgaaattgtcaaa 47445082  T
Q  349 cgttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  47445083 cgttagtcaattacccccc-tccgtttattttggctgttaa 47445122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 253 - 396
Target Start/End: Complemental strand, 47445913 - 47445769
Alignment:
Q  253 tgagtaaataggcaaaaaccccc-ctgaaattgtaactttcgtcaaaaa-cccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    ||||| ||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  47445913 tgagtgaataggcaaaaaccccctctgaaattgtaattttcatcaaaaatcccccctgatttttaagaaacttcaaaaaaacccctgaaattatcaaacg 47445814  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||| ||| |||||||||| |||||| ||||||    
T  47445813 ttagtcaattacccccc-tccatttgttttggttgttaaatgacta 47445769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 395
Target Start/End: Complemental strand, 36476106 - 36475966
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| ||   || | |||||||||||||||||||||||| ||||||| | ||||||||    
T  36476106 gagtgaataggcaaaaaccctcctgaaattgtaactttcgtcaaaaccctatctaacttttaagaaacttcaaaaacccccatgaaattgttaaacgtta 36476007  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||| ||| ||||||||||||||||| |||||    
T  36476006 gtcaattacccccc-tccatttgttttggctgttaaatgact 36475966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 275 - 395
Target Start/End: Original strand, 27585312 - 27585429
Alignment:
Q  275 cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtt 374  Q
    |||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| || ||||    
T  27585312 cctgaaattgtacctttcgtcaaaaatccccca-atttttaagaaacttcaaaaacccc-ctgaaattgtcaaacgttagtcgattacccccatt-cgtt 27585408  T
Q  375 tgttttggctgttaagtgact 395  Q
    ||||||||||||||| |||||    
T  27585409 tgttttggctgttaaatgact 27585429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 11343471 - 11343355
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||    
T  11343471 atgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 11343372  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  11343371 ctgtcaattacccccct 11343355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 11501491 - 11501375
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||    
T  11501491 atgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 11501392  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  11501391 ctgtcaattacccccct 11501375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 14282778 - 14282894
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||| ||| |||| |||    
T  14282778 atgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgt 14282877  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  14282878 ctgtcaattacccccct 14282894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 14284310 - 14284194
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  | |||||||||||||||||| |||| |||    
T  14284310 atgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaacccccctgaaattgtcaagcgt 14284211  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  14284210 ctgtcaattacccccct 14284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 253 - 394
Target Start/End: Original strand, 36475270 - 36475411
Alignment:
Q  253 tgagtaaataggcaaaaacccccct-gaaattgtaactttcgtcaaaaacccccc-tgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    ||||| ||||||||||||   |||| ||||||||||||||||||||||| |  || ||||||||||||||||||||||    |||||||||| | |||||    
T  36475270 tgagtgaataggcaaaaaaatcccttgaaattgtaactttcgtcaaaaaacttccatgatttttaagaaacttcaaaagaaaccctgaaattgttaaacg 36475369  T
Q  351 ttagtcaattaccccccttccgtttgttttggctgttaagtgac 394  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||    
T  36475370 ttagtcaattaccccc--tccgtttgttttggctgttaaatgac 36475411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 786732 - 786843
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaac-ccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    ||||||||||| |||||||||| || |||||| |||| |||| | |||||  |||||||||||||||||||||||||||| |||| | ||||||||||||    
T  786732 aatgagtaaattggcaaaaacctccttgaaatcgtaagtttcataaaaaaatccccctgatttttaagaaacttcaaaaaaccccataaaattatcaaac 786831  T
Q  350 gttagtcaatta 361  Q
    ||||||||||||    
T  786832 gttagtcaatta 786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 251 - 368
Target Start/End: Complemental strand, 41707122 - 41707005
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacg 350  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||||||  ||||||| ||||   |||| |||||||||||||||||||| |||| ||    
T  41707122 aatgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaaaacccctgaattttgcaaaacgtcaaaaacccccctgaaattgtcaagcg 41707023  T
Q  351 ttagtcaattacccccct 368  Q
    |  |||||||||||||||    
T  41707022 tctgtcaattacccccct 41707005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 249 - 368
Target Start/End: Original strand, 11341964 - 11342083
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||||||||| |||  ||||| ||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| ||||     
T  11341964 aaaaggagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaag 11342063  T
Q  349 cgttagtcaattacccccct 368  Q
    |||  |||||||||||||||    
T  11342064 cgtctgtcaattacccccct 11342083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 249 - 368
Target Start/End: Original strand, 11499983 - 11500102
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    |||| |||||||||| |||  ||||| ||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| ||||     
T  11499983 aaaaggagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaag 11500082  T
Q  349 cgttagtcaattacccccct 368  Q
    |||  |||||||||||||||    
T  11500083 cgtctgtcaattacccccct 11500102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 248 - 389
Target Start/End: Complemental strand, 27586125 - 27585987
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaa 347  Q
    |||||||||| ||||||||||||   || |||||||||||||||||| |||||  ||||  | |||||||||||||||||||  | ||||||||| | ||    
T  27586125 taaaatgagtgaataggcaaaaaaaaccttgaaattgtaactttcgttaaaaaatccccatacttttaagaaacttcaaaaa-actcctgaaattgttaa 27586027  T
Q  348 acgttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||||||||||||||||||  ||| |||||| ||||||||||    
T  27586026 acgttagtcaattaccccc--tccatttgttatggctgttaa 27585987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 45575952 - 45576061
Alignment:
Q  277 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 376  Q
    |||||||| || ||||||||||||||||| |||||||||| ||||||| ||||| ||| | ||||| |||||||||||||||||||||||  ||||||||    
T  45575952 tgaaattgaaagtttcgtcaaaaacccccatgatttttaaaaaacttc-aaaactcccataaaattgtcaaacgttagtcaattaccccc--tccgtttg 45576048  T
Q  377 ttttggctgttaa 389  Q
    ||| |||| ||||    
T  45576049 tttgggctattaa 45576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 4564248 - 4564152
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||| ||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  4564248 ccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 4564152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 248 - 368
Target Start/End: Complemental strand, 51306413 - 51306292
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacc-cccctgatttttaagaaacttcaaaaacccccctgaaattatca 346  Q
    |||||||||||||||| |||  |||||||||||||||||||||| ||||||||   ||||||| || |  ||||  |||||||||||||||||||| |||    
T  51306413 taaaatgagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaaaaacccctgaattatgcgaaatgtcaaaaacccccctgaaattgtca 51306314  T
Q  347 aacgttagtcaattacccccct 368  Q
    | |||  |||||||||||||||    
T  51306313 agcgtctgtcaattacccccct 51306292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 41729970 - 41729856
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  || ||||||||||||||| ||||||||||||||||||| | ||||   |||  |||||||||||||||||||| |||| |||      
T  41729970 gagtaaatagtcaattacacccctgaaattgtaattttcgtcaaaaacccccctaaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 41729871  T
Q  354 gtcaattacccccct 368  Q
    |||||||| ||||||    
T  41729870 gtcaattatccccct 41729856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 42813910 - 42813796
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||||||||||| ||||   |||  |||||||   |||||||||| |||| |||      
T  42813910 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaaaccctgaaattgtcaagcgtct 42813811  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  42813810 gtcaattacccccct 42813796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 42813248 - 42813343
Alignment:
Q  273 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||| |||||||||||||||| ||||   |||  |||||||| |||||||||||  ||| |||  |||||||||||||||    
T  42813248 cccctgaaattgtaactttcatcaaaaacccccctgaattttgccaaatgtcaaaaactcccctgaaattgccaagcgtcggtcaattacccccct 42813343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 368
Target Start/End: Original strand, 16420114 - 16420231
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    |||||||||||||| |||  ||||| ||||||||||||||||||| ||||| |||||||| ||||   |||  |||||||||||||||||||| | || |    
T  16420114 aaatgagtaaatagtcaattacccc-ctgaaattgtaactttcgttaaaaatccccctgaattttgcaaaatatcaaaaacccccctgaaattgtaaagc 16420212  T
Q  350 gttagtcaattacccccct 368  Q
    ||   ||||||||||||||    
T  16420213 gtctatcaattacccccct 16420231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 38482563 - 38482469
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    |||||||||||||||||||||||||||||||||||||| ||||   |||  | ||||||||||  |||||| |||| |||  |||||||||||||    
T  38482563 ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaaccccctggaaattgtcaagcgtctgtcaattaccccc 38482469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 51304754 - 51304851
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccct-gatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||||||| ||||||| |||||| || ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  51304754 ccccctgaaattgtaactttcatcaaaaatcccccttgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 51304851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 16422180 - 16422060
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaa----acccccctgatttttaagaaacttcaaaaacccccctgaaattatcaa 347  Q
    |||||||||||| |||  ||||||||||| ||||||||||||||||||     ||||||||| || | | |||  |||||||| ||||||||||| ||||    
T  16422180 atgagtaaatagtcaattacccccctgaagttgtaactttcgtcaaaaccccccccccctgaattatgaaaaatgtcaaaaactcccctgaaattgtcaa 16422081  T
Q  348 acgttagtcaattacccccct 368  Q
     |||  |||||||||||||||    
T  16422080 gcgtctgtcaattacccccct 16422060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 363
Target Start/End: Original strand, 46318760 - 46318869
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||| | ||||||||||||||||||||| ||||||||| ||||   |||  | |||||||||||||||||  |||| |||      
T  46318760 gagtaaatagtcaattacccccataaaattgtaactttcgtcaaaaccccccctgaattttgcaaaatgtaaaaaacccccctgaaatggtcaagcgtct 46318859  T
Q  354 gtcaattacc 363  Q
    ||||||||||    
T  46318860 gtcaattacc 46318869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 20898509 - 20898620
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-a 347  Q
    ||||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |    
T  20898509 aaaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcaca 20898607  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  20898608 acgttagtcaatt 20898620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 24646514 - 24646463
Alignment:
Q  312 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacc 363  Q
    ||||||||||||||||||||| | ||||||| |||||||||| |||||||||    
T  24646514 tttaagaaacttcaaaaaccctcatgaaattgtcaaacgttaatcaattacc 24646463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 20899393 - 20899286
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| |||||    
T  20899393 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 20899295  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  20899294 tagtcaatt 20899286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 26991094 - 26991038
Alignment:
Q  312 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||  |||| ||||| |||||||||| |||||||| |||||    
T  26991094 tttaagaaacttcaaaaacttccctaaaattgtcaaacgttaatcaattactcccct 26991038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 3898541 - 3898450
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  3898541 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 3898450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 43680361 - 43680452
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  43680361 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 43680452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 44209101 - 44209144
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||||  |||||||||||||||||| |||||||||    
T  44209101 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 44209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 389
Target Start/End: Original strand, 5158677 - 5158785
Alignment:
Q  279 aaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgtt 378  Q
    |||||||| ||||||| ||||| ||| | || ||||||||||||||| ||| |||  ||||||| ||||||||| |||||||  ||| | |||| |||||    
T  5158677 aaattgtagctttcgtaaaaaatcccgc-gacttttaagaaacttcacaaatccctttgaaattgtcaaacgttggtcaattttccctc-tccgattgtt 5158774  T
Q  379 ttggctgttaa 389  Q
    |||| ||||||    
T  5158775 ttggttgttaa 5158785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 18806629 - 18806719
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||||  | || ||||||||||||| |||||||||  ||||||||||  || |  |||||||||  | ||||||||||||    
T  18806629 atgagtaaataggcaattatcctcctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaatt 18806719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 46294436 - 46294490
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccct 307  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||  ||||||||    
T  46294436 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccct 46294490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 52869655 - 52869701
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||| |||  |||||||||||||||||| |||||||||    
T  52869655 aatgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 52869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 37612849 - 37612937
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 360  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  37612849 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 37612937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 38787531 - 38787620
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||||  |||||||||||||||||| |||| ||||  | ||||||||  || |  |||||||||  | ||||||||||||    
T  38787531 tgagtaaataggcaattacccccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattatccccctgaaatt 38787620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 45141461 - 45141510
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||| ||||||||||||||  |||||| ||||||||||| |||||||||    
T  45141461 taaaacgagtaaataggcaattacccccgtgaaattgtaagtttcgtcaa 45141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 52360426 - 52360345
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccc 335  Q
    ||||||||||||||  ||||| |||||||||||| |||| ||||  ||||||||||  || || |||||||||  |||||||    
T  52360426 gagtaaataggcaattaccccactgaaattgtaagtttcatcaattacccccctgaaattaaaaaaacttcaattacccccc 52360345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 16834364 - 16834408
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||    
T  16834364 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 16834408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 27234232 - 27234320
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||| |||||  | |||||||||||||||| |||||||||  ||| ||||||  || |  |||||||||  ||||||||||||||    
T  27234232 gagtaaatcggcaattatccccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccccctgaaatt 27234320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 29330169 - 29330062
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  |||||| |||  || |  |||||||||  |||||||||||||| ||| |||||    
T  29330169 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgt 29330071  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  29330070 tagtcaatt 29330062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 29358489 - 29358401
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  | | |||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  29358489 gagtaaataggcaattatctccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 29358401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 31675384 - 31675436
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccc 306  Q
    ||||||||||||||  |||||||||||||||||| |||| ||||  |||||||    
T  31675384 gagtaaataggcaattacccccctgaaattgtaagtttcatcaattacccccc 31675436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 44431180 - 44431232
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccc 306  Q
    |||||||||| |||  |||||||||||||||||| |||||||||  |||||||    
T  44431180 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccc 44431232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 46319187 - 46319143
Alignment:
Q  326 aaaacccccctgaaattatcaaacgttagtcaattaccccccttc 370  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||    
T  46319187 aaaacccccctgaaattgtcaagcgtctgtcaattaccccccttc 46319143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 46319234 - 46319178
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaaccccc 305  Q
    |||| ||||||| || |||  |||||||||||||| ||||||||||||||| |||||    
T  46319234 aaaaggagtaaaaagtcaattacccccctgaaattataactttcgtcaaaacccccc 46319178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 152; Significance: 4e-80; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 495 - 686
Target Start/End: Original strand, 32602 - 32793
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcatcaa 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  32602 aacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttgaaattcatcaa 32701  T
Q  595 caacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||    
T  32702 caacagaatgaataatagaaaatatcatgaacttgttggaaaaagaacaaggtttatgatgaatagcatgaacaacaacatcaacagcaacg 32793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 251 - 396
Target Start/End: Original strand, 32348 - 32493
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaaccccc-ctgaaattatcaaac 349  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  32348 aatgagtgaataggcaaaaaccctcctgaaattgtaactttcgtcaaaaatccctctgatttttaagaaacttcaaaaaccccctcggaaattatcaaac 32447  T
Q  350 gttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||| ||||| | ||||||||||||||||||||| ||||||    
T  32448 gttagtcaataacccctc-tccgtttgttttggctgttaaatgacta 32493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 254 - 396
Target Start/End: Complemental strand, 33280 - 33138
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaactt-caaaaacccccctgaaattatcaaacgtt 352  Q
    |||||||||||||||||   || |||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  33280 gagtaaataggcaaaaaaaaccttgaaattgtagctttcgtaaaaaactcccctgatttttaggaaacttccaaaaacccccctgaaattgtcaaacgtt 33181  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||    
T  33180 agtcaattacccccc-tccgtttgttttggctgttaaatgacta 33138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 9e-75; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 495 - 686
Target Start/End: Original strand, 27455168 - 27455361
Alignment:
Q  495 aacaacatcatcatcaacatcacacactttctaatgattctc--tctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcatc 592  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  27455168 aacaacatcatcatcaacatcacacactttataatgattctctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaattcatc 27455267  T
Q  593 aacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatcaacg 686  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||||    
T  27455268 aacaacaaaatgaataatagaaaagatcatgaacttgttggaaaaagaacaaggtttatgatgaatagcatgaacaacaacatcaacaacaacg 27455361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 253 - 395
Target Start/End: Complemental strand, 621672 - 621531
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  621672 tgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaacccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtt 621573  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  621572 agtcaattacccccc-tccgtttgttttggctgttaaatgact 621531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 254 - 396
Target Start/End: Original strand, 27454917 - 27455057
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |    
T  27454917 gagtgaataggcaaaaacccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttgaaaaacccctttgaaattatcaaacgtca 27455015  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  27455016 gtcaattacccccc-tccgtttgttttggctgttaaatgacta 27455057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 254 - 395
Target Start/End: Original strand, 620470 - 620610
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  620470 gagtaaataggcaaaaacccctctgaaattgtagttttcgtcaaaaatccccctgatttttaggaaacttcaaaaacccccctgaaattgacaaacgtta 620569  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  620570 gtcaattacccccc-tccgtttgttttggctgttaaatgact 620610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 254 - 395
Target Start/End: Original strand, 49681264 - 49681402
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||||||||||| ||||| |||||||| |||| ||||||||| |||||||||||||  |||||||||||||||| |||||||| ||||||| ||    
T  49681264 gagtaaataggcaaaaactcccct-aaattgtagcttttgtcaaaaactcccctgatttttagaaaacttcaaaaacccctctgaaattgtcaaacgcta 49681362  T
Q  354 gtcaattaccccccttccgtttgttttggctgttaagtgact 395  Q
    || ||||| ||||  ||||||||||||||||||||| |||||    
T  49681363 gttaattatcccc--tccgtttgttttggctgttaaatgact 49681402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 492 - 575
Target Start/End: Complemental strand, 49681918 - 49681835
Alignment:
Q  492 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttcaattaataaacaaca 575  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||    
T  49681918 aacaacaacatcatcatcaacatcacacactttctaatgattctctctctcttgtttgttaccttcttgaattcatcaacaaca 49681835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 584 - 686
Target Start/End: Complemental strand, 49681850 - 49681748
Alignment:
Q  584 gaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttggaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaacatca 683  Q
    |||||||||||||||| || |||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||    
T  49681850 gaattcatcaacaacataatgaataacataaaagatcatgaaattgttggaaaaagaacaacgtttatgatgaatagcatgaacaacaacatcaacaaca 49681751  T
Q  684 acg 686  Q
    |||    
T  49681750 acg 49681748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 21225798 - 21225938
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||| |  | ||||||||||||||||| |||||| ||  ||||||| |||||| ||    
T  21225798 tgagtgaataggcaaaa-cccacctgaaattgtaactttcgtcaaaaatcttcttgatttttaagaaactttaaaaacacctttgaaattgtcaaacctt 21225896  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    |||||||||||| |  ||||||||||||||||||||| ||||||    
T  21225897 agtcaattaccctc--tccgtttgttttggctgttaaatgacta 21225938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 253 - 366
Target Start/End: Complemental strand, 49682167 - 49682055
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| |||||||||||| || | ||||||||||||||||||||||||   |||| |||||||||||||||||||||  |||||||||||||||| ||||    
T  49682167 tgagtgaataggcaaaaatcctcttgaaattgtaactttcgtcaaaaaattccctaatttttaagaaacttcaaaaa-tcccctgaaattatcaatcgtt 49682069  T
Q  353 agtcaattaccccc 366  Q
    ||||||||||||||    
T  49682068 agtcaattaccccc 49682055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 16508258 - 16508143
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||     
T  16508258 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 16508159  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  16508158 tgtcaattacccccct 16508143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 31633726 - 31633614
Alignment:
Q  275 cctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtt 374  Q
    |||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||| | ||||| |||||| |||||| |||||||||  ||||||    
T  31633726 cctgaaattggaagtttcgtcaaaaacccccttaatttttaagaaacttcaaaaacccccataaaattgtcaaacattagtccattaccccc--tccgtt 31633629  T
Q  375 tgttttggctgttaa 389  Q
    ||||| |||||||||    
T  31633628 tgtttgggctgttaa 31633614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 2613631 - 2613745
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  2613631 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2613730  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  2613731 gtcaattacccccct 2613745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 50662995 - 50663109
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  50662995 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 50663094  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  50663095 gtcaattacccccct 50663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 50664536 - 50664422
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  50664536 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 50664437  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  50664436 gtcaattacccccct 50664422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 16506867 - 16506983
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| |||||||| ||||   |||  |||||||||||||||||||| |||| |||    
T  16506867 atgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 16506966  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  16506967 ctgtcaattacccccct 16506983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 23102399 - 23102304
Alignment:
Q  271 cccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    |||||||||||||||| |||||||||||||||||||||| ||||   |||||||||| |||||||||||||| |||| |||| |||||||||||||    
T  23102399 cccccctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtttgtcaattaccccc 23102304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 55978475 - 55978589
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| ||||||| ||||   |||  |||||||||||||||||||| |||| |||      
T  55978475 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 55978574  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  55978575 gtcaattacccccct 55978589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 23100936 - 23101052
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    |||||||||||| |||  |||||||| |||||||| |||||||||||||||||||||| ||||   |||||||||| |||||||| ||||| |||| |||    
T  23100936 atgagtaaatagtcaattacccccctaaaattgtacctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctaaaattgtcaagcgt 23101035  T
Q  352 tagtcaattacccccct 368  Q
      |||||||||||||||    
T  23101036 ctgtcaattacccccct 23101052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 11147797 - 11147879
Alignment:
Q  306 ctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||| |||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  11147797 ctgacttttaagaaacttcaaaaattcccttgaaattgtcaaacgttagtcaattacccccc-tccgtttgttttggctgttaa 11147879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 248 - 368
Target Start/End: Original strand, 2215779 - 2215899
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaa 347  Q
    |||||||||||||||| |||  |||||||| ||||||||||||||||||||||||| | ||| ||||   |||  ||||||||||||||||||||  |||    
T  2215779 taaaatgagtaaatagtcaattacccccctaaaattgtaactttcgtcaaaaaccctcatgaattttgcaaaatgtcaaaaacccccctgaaattgccaa 2215878  T
Q  348 acgttagtcaattacccccct 368  Q
     |||  |||||||||||||||    
T  2215879 gcgtctgtcaattacccccct 2215899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 31632381 - 31632514
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    |||||||||||| |||||   || |||||||  || |||||||||||||  || |||||||||||||||||| ||||||| ||| ||||| |||||||||    
T  31632381 tgagtaaataggtaaaaaaaaccttgaaattagaagtttcgtcaaaaacttccatgatttttaagaaacttc-aaaaccctcct-aaattgtcaaacgtt 31632478  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||||||| |||||| ||||||||||| |||||||||    
T  31632479 agtcaattgcccccc-tccgtttgtttgggctgttaa 31632514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 56065247 - 56065151
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||||||||| ||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  56065247 ccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 56065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 2217267 - 2217152
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||||| || ||| ||||   |||  |||||||||||||||||||| |||| |||     
T  2217267 tgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacctccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 2217168  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  2217167 tgtcaattacccccct 2217152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 56063647 - 56063762
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttc-aaaaacccccctgaaattatcaaacgtt 352  Q
    |||||||||| |||  ||||||||||||||||||||||| |||||||||||||||| ||||   |||  || |||||||||||||||||| |||| |||     
T  56063647 gagtaaatagtcaattacccccctgaaattgtaactttcatcaaaaacccccctgaattttgcaaaatgtcaaaaaacccccctgaaattgtcaagcgtc 56063746  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  56063747 tgtcaattacccccct 56063762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 253 - 389
Target Start/End: Complemental strand, 21226658 - 21226525
Alignment:
Q  253 tgagtaaataggcaaaaacc-cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||| ||||||||||||   ||||| ||||||||||||| |||||||| || ||||| |||||||||| |||||||| ||| |||||||| | |||| |    
T  21226658 tgagtgaataggcaaaaaaaacccctcaaattgtaactttagtcaaaaa-cctcctgacttttaagaaatttcaaaaa-ccctctgaaattgttaaacat 21226561  T
Q  352 tagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||||||||||||||  |||||||||||||||| ||||    
T  21226560 tagtcaattaccccc--tccgtttgttttggctattaa 21226525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 677046 - 677162
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||| ||||| ||||   |||  | |||||||||  ||||||| |||| |||      
T  677046 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaccctcctgaattttgcaaaatgtaaaaaacccctatgaaattgtcaagcgtct 677145  T
Q  354 gtcaattaccccccttc 370  Q
    |||||||||||||||||    
T  677146 gtcaattaccccccttc 677162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 21224245 - 21224385
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||| ||||||||||| | | |||||||||||||||||||| ||||| |   ||||||||||| ||| ||||||||| ||  ||||||| |||||| ||    
T  21224245 tgagtgaataggcaaaa-ctcgcctgaaattgtaactttcgtaaaaaatctttctgatttttaaaaaatttcaaaaacacctatgaaattgtcaaacctt 21224343  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||  ||||  ||||||| ||||||||||||| ||||||    
T  21224344 agtcaatt--cccctctccgtttattttggctgttaaatgacta 21224385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 27455821 - 27455765
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  27455821 tgagtaaataggcaaaaacccccttgaaattgtagctttcgtcaaaaacccccctga 27455765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 2615136 - 2615022
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||  | | ||| ||||   |||  |||||||||||||||||||| |||| |||      
T  2615136 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaacacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2615037  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  2615036 gtcaattacccccct 2615022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 11148180 - 11148098
Alignment:
Q  305 cctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    ||||| ||||||||||||||||||||||   ||||||| ||||| |||||||||||||||||  |||||||||||||| ||||||    
T  11148180 cctgacttttaagaaacttcaaaaacccttatgaaattgtcaaatgttagtcaattaccccc--tccgtttgttttggttgttaa 11148098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 27455780 - 27455708
Alignment:
Q  323 tcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  27455780 tcaaaaacccccctgaaattgccaaatgttagtcaattacccccc-tccgtttgttttggcagttaaatgacta 27455708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 388
Target Start/End: Complemental strand, 31779995 - 31779860
Alignment:
Q  253 tgagtaaataggcaaaaaccccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgt 351  Q
    ||||| ||||||| |||| |||| |||||||||||||||| ||||||||| |   ||||||||   |||||| |||||| || || ||||| | ||||||    
T  31779995 tgagtgaataggcgaaaatcccctctgaaattgtaacttttgtcaaaaactctattgatttttgcaaaactttaaaaactcctctaaaattgttaaacgt 31779896  T
Q  352 tagtcaattaccccccttccgtttgttttggctgtta 388  Q
    |||||||||||||||||| | | ||||||||||||||    
T  31779895 tagtcaattacccccctt-catctgttttggctgtta 31779860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 368
Target Start/End: Complemental strand, 52897809 - 52897714
Alignment:
Q  273 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||  || |||||||| |||| |||  |||||||||||||||    
T  52897809 cccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaacctctgaaattgtcaagcgtcggtcaattacccccct 52897714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 277 - 368
Target Start/End: Original strand, 52896329 - 52896420
Alignment:
Q  277 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    |||||||||||||||||||||||||||| |||| ||||   |||  |||||||||| | ||||||| |||| |||  |||||||||||||||    
T  52896329 tgaaattgtaactttcgtcaaaaacccctctgaattttgtaaaatgtcaaaaaccctcttgaaattgtcaagcgtctgtcaattacccccct 52896420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 3880872 - 3880909
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3880872 ccccctgaaattgtaactttcgtcaaaaacccccctga 3880909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 30317555 - 30317601
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||    
T  30317555 aatgagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 30317601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 6194993 - 6194940
Alignment:
Q  256 gtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    ||||||||||||  |||||||||||||||||| |||||||||  ||||||||||    
T  6194993 gtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctga 6194940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 21917096 - 21917184
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 360  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||| |||||||||||||| ||| ||||||||||||||    
T  21917096 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaaatacccccctgaaatt-tcacaacgttagtcaatt 21917184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 36077373 - 36077284
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatta 343  Q
    |||||||||| |||   ||||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  |||||||||||||||    
T  36077373 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatta 36077284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 36870096 - 36870185
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||  ||||| ||||  || |  |||||||||  ||||||||||||||    
T  36870096 tgagtaaatagacaattacccccctgaaattgtaagtttcgtcaattaccccactgaaattaacaaaacttcaattacccccctgaaatt 36870185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 7971917 - 7971965
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||||||||||||||||||  |||| ||||||||||||| |||||||||    
T  7971917 aaaatgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa 7971965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 32859919 - 32860030
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-a 347  Q
    ||||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||| ||||||||| ||| |    
T  32859919 aaaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctcctgaaatt-tcaca 32860017  T
Q  348 acgttagtcaatt 360  Q
    |||||||||||||    
T  32860018 acgttagtcaatt 32860030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 5865442 - 5865492
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaa 299  Q
    |||||||||| ||||||||||| ||||| | |||||||||||||||||||||    
T  5865442 taaaatgagtgaataggcaaaa-cccccttaaaattgtaactttcgtcaaaa 5865492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 50182134 - 50182043
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  50182134 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 50182043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 15031928 - 15031882
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    |||||||||||||||||  |||||||| ||||||||| |||||||||    
T  15031928 aatgagtaaataggcaattacccccctaaaattgtaagtttcgtcaa 15031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 342
Target Start/End: Original strand, 23161089 - 23161182
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||| ||||||||| ||||  || ||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  23161089 aaaacgagtaaataagcaattactcccctgaaattgtaagtttcatcaattacccccctgaaattaagaaaacttcaattacccccctgaaatt 23161182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 23591352 - 23591299
Alignment:
Q  245 atttaaaat-gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||| |||||||||    
T  23591352 atttaaaattgagtaaataggcaattacccccctaaaattgtaagtttcgtcaa 23591299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 28256009 - 28255921
Alignment:
Q  272 ccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgttagtcaatt 360  Q
    |||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||||||||||||||    
T  28256009 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaacgttagtcaatt 28255921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 37687493 - 37687538
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||||||  |||||||||||||||||| |||| ||||    
T  37687493 atgagtaaataggcaattacccccctgaaattgtaagtttcatcaa 37687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 3880894 - 3880938
Alignment:
Q  323 tcaaaaacccccctgaaattatcaaacgttagtcaattacccccc 367  Q
    |||||||||||||||||||| |||| |||  ||||||||||||||    
T  3880894 tcaaaaacccccctgaaattgtcaagcgtcggtcaattacccccc 3880938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 13966696 - 13966784
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  |||||| ||||||||||| |||||||||  | ||||||||  || |  |||||||||  |||| |||||||||    
T  13966696 gagtaaataggcaattacccccttgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattaccctcctgaaatt 13966784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 46614839 - 46614755
Alignment:
Q  258 aaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||   ||||||||||||||||| ||| |||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  46614839 aaataggcaatttcccccctgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 46614755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 533 - 680
Target Start/End: Original strand, 36067603 - 36067750
Alignment:
Q  533 tctctctctcttgtttgttaccttcttcaattaataaacaacaaccctttggaattcatcaacaacagaaagaataacagaaaagatcatgaacttgttg 632  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36067603 tctctctctcttgtttgttaccttcttgaattaatcaacaacaaccctttggaattcatcaacaacagaatgaataacagaaaagatcatgaacttgttg 36067702  T
Q  633 gaaaaagaacaaaggttatgatgaatagcatgaacaccaacatcaaca 680  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||    
T  36067703 gaaaaagaacaaggtttatgatgaatagcatgaacaacaacatcaaca 36067750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 254 - 388
Target Start/End: Complemental strand, 3987371 - 3987239
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||   || ||||||| ||||||||||    
T  3987371 gagtgaataggcaaaaagccccctgaaattgtaactttcgtcaaaaatcctcctgatttttaagaaacttaaaaaaaaaccttgaaattgtcaaacgtta 3987272  T
Q  354 gtcaattaccccccttccgtttgttttggctgtta 388  Q
    |||||||||||||  ||||||||||||||||||||    
T  3987271 gtcaattaccccc--tccgtttgttttggctgtta 3987239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 250 - 396
Target Start/End: Original strand, 36067292 - 36067435
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||||| ||| ||||    
T  36067292 aaatgagtgaataggcaaaaaccctcctgaaattgtaactttcgtcaaaatcccccctgatttttaagaaattttaaaaaaccccctgaaa-tattaaac 36067390  T
Q  350 gttagtcaattaccccccttccgtttgttttggctgttaagtgacta 396  Q
     ||||||||||||||||  ||||||| ||||||| ||||| ||||||    
T  36067391 attagtcaattaccccc--tccgtttattttggccgttaaatgacta 36067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 253 - 389
Target Start/End: Complemental strand, 32391025 - 32390892
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||||||||||   ||| ||||||||| | |||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||||||||    
T  32391025 tgagtaaataggcaaaaaaaaccccgaaattgtagcattcgtcaaaa-cccccctgacatttaagaaacttcaaaaatcccc-tgaaattatcaaacgtt 32390928  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaa 389  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  32390927 agtcaattacccccc-tccgtttgttttgactgttaa 32390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 276 - 384
Target Start/End: Complemental strand, 36068220 - 36068113
Alignment:
Q  276 ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgttt 375  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||| |||||||| |||||||||||| ||||| |||||||||||||||||| |||||||    
T  36068220 ctgaaattgtagctttcgtcaaaaaaccccctgatttttaggaaatttcaaaaaaccccctgaaattgtcaaatgttagtcaattacccccc-tccgttt 36068122  T
Q  376 gttttggct 384  Q
    |||||||||    
T  36068121 gttttggct 36068113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 277 - 396
Target Start/End: Complemental strand, 30480808 - 30480689
Alignment:
Q  277 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 376  Q
    |||||||||||||||||| |||||  ||| |||||||||||| ||||||||||  ||| ||||||| |||||||||||||||||| |||||| |||||||    
T  30480808 tgaaattgtaactttcgtaaaaaattcccttgatttttaagatacttcaaaaaatcccttgaaattgtcaaacgttagtcaattatccccct-ccgtttg 30480710  T
Q  377 -ttttggctgttaagtgacta 396  Q
     ||||||||||||| ||||||    
T  30480709 gttttggctgttaaatgacta 30480689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 380
Target Start/End: Original strand, 6733017 - 6733141
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||| |||||||||||||| || | ||||| ||||||||||||||||||||| ||| |||||| ||||||||||||| ||| ||||||| | ||||||||    
T  6733017 gagtgaataggcaaaaacctccataaaattataactttcgtcaaaaaccccc-tgacttttaaaaaacttcaaaaactcccatgaaattgttaaacgtta 6733115  T
Q  354 gtcaattaccccccttccgtttgtttt 380  Q
    |||||||| || || ||||||||||||    
T  6733116 gtcaattatcctcc-tccgtttgtttt 6733141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 31286980 - 31286866
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||| ||| |||| |||      
T  31286980 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtct 31286881  T
Q  354 gtcaattacccccct 368  Q
    |||||||||||||||    
T  31286880 gtcaattacccccct 31286866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 31285487 - 31285584
Alignment:
Q  271 cccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattacccccct 368  Q
    ||||||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||||||||||| |||| |||  |||||||||||||||    
T  31285487 cccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtctgtcaattacccccct 31285584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 389
Target Start/End: Complemental strand, 6733276 - 6733140
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaac 349  Q
    |||||||| |||||||||||| | | |||||||||||||||||||||||||   |||||||||||||||||||| |||||   |  ||||||| ||||||    
T  6733276 aaatgagtgaataggcaaaaatctctctgaaattgtaactttcgtcaaaaaaaaccctgatttttaagaaactt-aaaaaaaactttgaaattgtcaaac 6733178  T
Q  350 gttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    ||||| |||||||||||  | ||||| |||||||||||||    
T  6733177 gttagccaattaccccc--ttcgtttattttggctgttaa 6733140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 24240589 - 24240699
Alignment:
Q  277 tgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttg 376  Q
    ||||||||||||||| ||||||||||||| ||||||||   || |||||||||  ||||||||||| | ||| |||||||||||||||||| || || ||    
T  24240589 tgaaattgtaacttttgtcaaaaacccccttgatttttgcaaagcttcaaaaaaacccctgaaattgttaaatgttagtcaattacccccc-tctgtctg 24240687  T
Q  377 ttttggctgtta 388  Q
    ||||||||||||    
T  24240688 ttttggctgtta 24240699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 35394827 - 35394712
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||||||||||||| ||||   |||  |||||||||||| ||||||| |||| | |     
T  35394827 tgagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccatgaaattgtcaagcatc 35394728  T
Q  353 agtcaattacccccct 368  Q
     |||||||||||||||    
T  35394727 tgtcaattacccccct 35394712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 368
Target Start/End: Complemental strand, 29721203 - 29721083
Alignment:
Q  245 atttaaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattat 344  Q
    |||| |||||||||||||| |||  |||||| |||||||||||||||| |||||||| ||||||| ||||   |||| |||||||  ||||||||||| |    
T  29721203 attttaaatgagtaaatagtcaattacccccttgaaattgtaactttcttcaaaaac-cccctgaattttgcaaaacgtcaaaaa--cccctgaaattgt 29721107  T
Q  345 caaacgttagtcaattacccccct 368  Q
    ||| |||| |||||||||||||||    
T  29721106 caagcgtttgtcaattacccccct 29721083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 34894195 - 34894307
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||||| |||||||||| |||||||||||||  | ||||| ||||   ||||||||||||  ||||||||||| |||||||| |    
T  34894195 gagtaaatagtcaattacccccttgaaattgtagctttcgtcaaaaattctcctgaattttgcaaaacttcaaaaaaacccctgaaattgtcaaacgtca 34894294  T
Q  354 gtcaattaccccc 366  Q
    ||||| |||||||    
T  34894295 gtcaaataccccc 34894307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 35393163 - 35393277
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtta 353  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||  ||||||| ||||   |||  ||||||| |||||||||||| |||| |||      
T  35393163 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaattcccctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaagcgtct 35393262  T
Q  354 gtcaattacccccct 368  Q
    |||||||| ||||||    
T  35393263 gtcaattatccccct 35393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 26157272 - 26157360
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||| |||   ||||||||||||||||| ||| ||||||||||||| ||| ||||   |||| ||||||||||||||||||||    
T  26157272 gagtaaatagtcaattgcccccctgaaattgtaatttttgtcaaaaacccccttgaattttgcaaaacgtcaaaaacccccctgaaatt 26157360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 29417146 - 29417206
Alignment:
Q  249 aaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||  ||||||||||    
T  29417146 aaaatgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctga 29417206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 3986569 - 3986667
Alignment:
Q  294 tcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaagtga 393  Q
    |||||||||||| | |||||||||||| |||||||| ||| || ||||| | ||| |||| |||||||||||   |||||||||||||| |||||| |||    
T  3986569 tcaaaaacccccttaatttttaagaaatttcaaaaaaccctctaaaattgtaaaatgttaatcaattacccc---tccgtttgttttggttgttaaatga 3986665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 21125750 - 21125695
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    ||||||||||||||  |||||||||||||||||| |||||||||  ||||||||||    
T  21125750 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctga 21125695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 41589267 - 41589315
Alignment:
Q  339 aattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  41589267 aattatcaaacgttagtcaattaccccc--tctgtttgttttggctgttaa 41589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 29418237 - 29418148
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||||  | |||||||||||||||| |||||||||  || |||||||  || |  |||||||||  ||||||||||||||    
T  29418237 tgagtaaataggcaattatccccctgaaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattacccccctgaaatt 29418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 529
Target Start/End: Original strand, 36067544 - 36067581
Alignment:
Q  492 aacaacaacatcatcatcaacatcacacactttctaat 529  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36067544 aacaacaacatcatcttcaacatcacacactttctaat 36067581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 360
Target Start/End: Original strand, 3627927 - 3628042
Alignment:
Q  245 atttaaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattat 344  Q
    |||| |||||||||||||| |||   ||||||||||||||||| |||| ||||  |||||||| |  || |  |||||||||  |||||||||||||| |    
T  3627927 attttaaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacccccctgaaatt-t 3628025  T
Q  345 ca-aacgttagtcaatt 360  Q
    || ||||||||||||||    
T  3628026 cacaacgttagtcaatt 3628042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 22021769 - 22021856
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  ||||| |||||||||||| |||||||||  ||||||||||| || |  |||||||||  |||||| |||||||    
T  22021769 gagtaaataggcaattacccc-ctgaaattgtaagtttcgtcaattacccccctgatattaataaaacttcaattacccccttgaaatt 22021856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 11455413 - 11455460
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||||||||  |||| ||||||||||||| |||||||||    
T  11455413 aaatgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa 11455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 17774288 - 17774331
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||||||  |||||||||||||||||| |||||||||    
T  17774288 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 17774331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 26928069 - 26928124
Alignment:
Q  252 atgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccct 307  Q
    |||||||||||| |||  |||||||||||||||||| ||||||||| |||| ||||    
T  26928069 atgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaataacctccct 26928124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 33697444 - 33697389
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    ||||||||||||||  || ||||||||||||||| |||||||||  ||||||||||    
T  33697444 gagtaaataggcaattactcccctgaaattgtaagtttcgtcaattacccccctga 33697389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 39628393 - 39628480
Alignment:
Q  273 cccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 360  Q
    ||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||   |||||||||||||||    
T  39628393 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcaaaacgttagtcaatt 39628480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 45154905 - 45155015
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aa 348  Q
    |||||||||||||| |||   || |||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||||||||||| ||| ||    
T  45154905 aaatgagtaaatagtcaatttcctccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt-tcacaa 45155003  T
Q  349 cgttagtcaatt 360  Q
    ||||||||||||    
T  45155004 cgttagtcaatt 45155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 360
Target Start/End: Original strand, 17271802 - 17271888
Alignment:
Q  274 ccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaatt 360  Q
    |||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||  | ||||||||||||||    
T  17271802 ccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcccaacgttagtcaatt 17271888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 5668244 - 5668333
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  5668244 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 5668333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 366
Target Start/End: Original strand, 32389978 - 32390038
Alignment:
Q  303 cccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccc 366  Q
    |||| ||| |||||||||||| ||||   ||||||||||| |||||||||||||||||| ||||    
T  32389978 cccccgatatttaagaaactttaaaa---cccctgaaattgtcaaacgttagtcaattatcccc 32390038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 34994790 - 34994702
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  || ||||||||||||||| |||| ||||  | ||||||||  || |  |||||||||  ||||||||||||||    
T  34994790 gagtaaataggcaattacacccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattacccccctgaaatt 34994702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 250 - 342
Target Start/End: Original strand, 41080258 - 41080350
Alignment:
Q  250 aaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||| |||   ||||||||||||||||| |||| ||||  || |||||||  || |  |||||||||  ||||||||||||||    
T  41080258 aaatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattactcccctgaaattaacaaaacttcaattacccccctgaaatt 41080350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 46101005 - 46100898
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatca-aacgt 351  Q
    ||||||||||| |||   ||||||||||||||||| |||| ||||  ||||||||||  || |  |||||||||  |||||| ||||||| ||| |||||    
T  46101005 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaagttaacaaaacttcaattacccccttgaaatt-tcacaacgt 46100907  T
Q  352 tagtcaatt 360  Q
    |||||||||    
T  46100906 tagtcaatt 46100898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 1997 - 2080
Alignment:
Q  303 cccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgtta 388  Q
    ||||||||||||   |||||||||||||||| |||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  1997 cccctgatttttgcaaaacttcaaaaacccc-ctgaaattgttaaacgttagtcaattacccccc-tccgtctgttttggctgtta 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 26683 - 26817
Alignment:
Q  254 gagtaaataggcaaaaaccccc-ctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaacgtt 352  Q
    |||| |||||| |||| ||||| |||||||||||||||||||||||||  ||    | ||||||||||||||||||| |  ||||||||| |||||||||    
T  26683 gagtgaataggtaaaatccccctctgaaattgtaactttcgtcaaaaagtccgacaacttttaagaaacttcaaaaatcttcctgaaattgtcaaacgtt 26782  T
Q  353 agtcaattaccccccttccgtttgttttggctgttaa 389  Q
    || ||| ||  || | ||||||| |||||||||||||    
T  26783 agacaacta--ccacatccgtttattttggctgttaa 26817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 27477 - 27404
Alignment:
Q  312 tttaagaaacttcaaaaacccccctgaaattatcaaacgttagtcaattaccccccttccgtttgttttggctgttaa 389  Q
    |||||||||||| ||||||| | |  ||||| ||||||| |||||||||||||||  |||||||||||||||||||||    
T  27477 tttaagaaacttaaaaaacctctc--aaattgtcaaacgatagtcaattaccccc--tccgtttgttttggctgttaa 27404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 43501 - 43413
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||||||||  |||||||||||||||||| |||||||||  ||||||||||  || |  |||||||||  ||||||||||||||    
T  43501 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatt 43413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 35132 - 35077
Alignment:
Q  254 gagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctga 309  Q
    ||||||||||||||| |||||||||||||||||| | |||||||  ||||||||||    
T  35132 gagtaaataggcaaatacccccctgaaattgtaagtgtcgtcaattacccccctga 35077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 1325 - 1383
Alignment:
Q  248 taaaatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccc 306  Q
    |||||||||||||||| |||  |||||||||||||||||| |||||||||  |||||||    
T  1325 taaaatgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccc 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0945 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 1162 - 1251
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    ||||||||| |||||  |||||| ||||||||||| |||||||||  |||||| |||  || |  |||||||||  ||||||||||||||    
T  1162 tgagtaaattggcaattacccccgtgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattacccccctgaaatt 1251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 1872 - 1775
Alignment:
Q  251 aatgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaattatcaaa 348  Q
    ||||||||||||| |||   ||||||||||||||||| |||| ||||  ||||| ||||  || |  |||||||||  ||||||||||||||| ||||    
T  1872 aatgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaattaacaaa 1775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 342
Target Start/End: Original strand, 239161 - 239250
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaacccccctgatttttaagaaacttcaaaaacccccctgaaatt 342  Q
    |||||||||||||||  ||| |||||||||||||| |||||| ||  ||||||||||  || |  |||||||||  |||||| |||||||    
T  239161 tgagtaaataggcaattacctccctgaaattgtaagtttcgttaattacccccctgaaattaacaaaacttcaattacccccttgaaatt 239250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 7697 - 7662
Alignment:
Q  259 aataggcaaaaacccccctgaaattgtaactttcgtc 295  Q
    ||||||||||||||||| |||||||||||||||||||    
T  7697 aataggcaaaaaccccc-tgaaattgtaactttcgtc 7662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 95095 - 95051
Alignment:
Q  253 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaa 297  Q
    ||||||||||| |||  |||||||||||||||||| |||||||||    
T  95095 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 95051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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