View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1526-2-Insertion-17 (Length: 530)
Name: NF1526-2-Insertion-17
Description: NF1526-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1526-2-Insertion-17 |
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Alignment Details
Target: chr4 (Bit Score: 496; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 1 - 523
Target Start/End: Complemental strand, 1092722 - 1092200
Alignment:
| Q |
1 |
tctaaaatatttatagttgatgtcttgagattttgcattttgcaagtgtttgtgatatagttctctttctatcacaggagatatggaattcaagcagaac |
100 |
Q |
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| T |
1092722 |
tctaaaatatttatagttgatgtcttgagattttgcattttgcaagtgtttgtgatatagttctctttctatcacaggagatatggaattcaagcagaac |
1092623 |
T |
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| Q |
101 |
aagtatttgcctgctgaaaagcaggttgtgactgctgatcctgacgtaacttcggtaagtattgctttgtgtattatgcactacaaagaagataagactt |
200 |
Q |
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| T |
1092622 |
aagtatttgcctgctgaaaagcaggttgtgactgctgatcctgacgtaacttcggtaagtattgctttgtgtattatgcactacaaagaagataagactt |
1092523 |
T |
|
| Q |
201 |
gtagctgtttattctctgttttatttgctatattgatnnnnnnnnntatttctgttggaaatatataacttgatttatactatttgggcatcgttcatat |
300 |
Q |
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| T |
1092522 |
gtagctgtttattctctgttttatttgctatattgataaaaaaatatatttctgttggaaatatataacttgatttatactatttgggcatcgttcatat |
1092423 |
T |
|
| Q |
301 |
gctccatgatagttttgttctctattttcctcgctttaatttgaatttgtttacttattttatttatgtgcgataggttgagctttgcaaagatgatgag |
400 |
Q |
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| T |
1092422 |
gctccatgatagttttgttctctattttcctcgctttaatttgaatttgtttacttattttatttatgtgcgataggttgagctttgcaaagatgatgag |
1092323 |
T |
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| Q |
401 |
tttcttgtgatagcttgtgatgggatatggtatgttatatagatgacaaatgttccctttttattatgtattctcagttctcactttaatttacttctgt |
500 |
Q |
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| T |
1092322 |
tttcttgtgatagcttgtgatgggatatggtatgttatatagatgacaaatgttccctttttattatgtattctcagttctcactttaatttacttctgt |
1092223 |
T |
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| Q |
501 |
ataacttctttatgtgtctaggg |
523 |
Q |
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| T |
1092222 |
ataacttctttatgtgtctaggg |
1092200 |
T |
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