View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1526-2-Insertion-18 (Length: 142)
Name: NF1526-2-Insertion-18
Description: NF1526-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1526-2-Insertion-18 |
 | |
|
| [»] chr7 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 134; Significance: 4e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 134; E-Value: 4e-70
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 24287079 - 24287212
Alignment:
| Q |
9 |
attaatggtattccataaaagaaaattcttcaacaacaaaataatgttaaaattatagaaatgatatttaaacaatcgttttaaagagacagttttctct |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24287079 |
attaatggtattccataaaagaaaattcttcaacaacaaaataatgttaaaattatagaaatgatatttaaacaatcgttttaaagagacagttttctct |
24287178 |
T |
|
| Q |
109 |
ttcatactcttattgtacattaattctttctccc |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
24287179 |
ttcatactcttattgtacattaattctttctccc |
24287212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University