View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15261_low_3 (Length: 287)
Name: NF15261_low_3
Description: NF15261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15261_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 8445469 - 8445208
Alignment:
| Q |
7 |
agcaaaggtaattcattgtttcccatcctcgttgaagacttgagggtaaaaacaaagacatttagcaagaaatagaggaattgttgaatccacagatccc |
106 |
Q |
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| T |
8445469 |
agcaaagataattcattgtttccgatcctcgttgaagacttgagggtaaaaacaaagacatttagcaagaaatagaggaattgttgaatccacagatccc |
8445370 |
T |
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| Q |
107 |
cctctccaagtgctgaaagaaacgccaatgggcagagagataaaaagagattggtttgtgtaatataagagaagaatgaatgaataatatttagatatga |
206 |
Q |
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| T |
8445369 |
cctctccaagtgctgaaagaaacgccaatgggcagagagataaaaagagattggtttgtgta--ataagagaagaatgaatgaataatatttagatatga |
8445272 |
T |
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| Q |
207 |
aagtaatgtttatgtttatgatagtattattagagatgatagaattgagtttgggacgtgtcaa |
270 |
Q |
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| T |
8445271 |
aagtaatgtttatgtttatgagagtattattagagatgatagaattgagtttgggacgtgtcaa |
8445208 |
T |
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