View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15263_low_5 (Length: 350)
Name: NF15263_low_5
Description: NF15263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15263_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 332
Target Start/End: Original strand, 10765847 - 10766167
Alignment:
| Q |
13 |
atactcacaaaa-ctattcagttatgtcttctatctttaacaaaaaattaagattttttatccaagagattctatttctgaatgctcaccctgtcacagt |
111 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10765847 |
atactcacaaaaactattcagttatgtcttctatctttaacaaaaaattaagattttttatccaagagattctatttctgaatgctcaccctgtcacagt |
10765946 |
T |
|
| Q |
112 |
ctatagcaaacagtagcacatgaccaagagataagttgttatacatgtgtaaacnnnnnnnnnnnnnnnnnnnnntgtaaggttctatatttgtccaatt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
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| T |
10765947 |
ctatagcaaacagtagcacatgaccaagagataagttgttatacatgtgtaaacaaataaaaataaaataaaaattgtaaggttctatttttgtccaatt |
10766046 |
T |
|
| Q |
212 |
attttctgttacccatgtgaccaagtgcaaacacagaaacagttgtaacattagtacaaattttgtaatctaggacaaagatgacactgaggtcgagatg |
311 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
10766047 |
attttctgttacccatgtgaccaagtgcaaacacagaaacagttgtaacattagtacaaattttgtagtctaggacaaagatgacactgaggtcgagatg |
10766146 |
T |
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| Q |
312 |
aatctatgttaggcatgtcct |
332 |
Q |
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||||||||||||||||||||| |
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| T |
10766147 |
aatctatgttaggcatgtcct |
10766167 |
T |
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