View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15264_low_2 (Length: 558)
Name: NF15264_low_2
Description: NF15264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15264_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 265 - 542
Target Start/End: Original strand, 53538378 - 53538655
Alignment:
| Q |
265 |
tccatcatttgaacaacaattactgcaagtcactcgcaagcaaaagaatgatagtgagaggagaagcactgattataaagaatgatagtgctgattttca |
364 |
Q |
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| T |
53538378 |
tccatcatatgaacaacaattactgcaagtcactcgcaagcaaaagaatgatagtgagaggagaagcactgattataaagaatgatagtgctgattttca |
53538477 |
T |
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| Q |
365 |
atagtgagctctgccatctaattctaaccctcatcatatgattgttgaagcctttgatcaagtgaggacatggagcctacatggtcacctaaccttcctt |
464 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53538478 |
atagtgagctctgccatctaattctaaccctcatcatatgattgttgaagcctttgatcaagtgaggacatggagcctacatggtcacctaaccttcctt |
53538577 |
T |
|
| Q |
465 |
ctataattcattcaatcagctgctgtttgctctgatataaccccctggctgacagatcacatagagctccccaaaatg |
542 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53538578 |
ctataattcattcaatcagctgctgtttgctctgatataaccccctggctgacagatcacatagagctccccaaaatg |
53538655 |
T |
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