View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15264_low_4 (Length: 500)

Name: NF15264_low_4
Description: NF15264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15264_low_4
NF15264_low_4
[»] chr3 (48 HSPs)
chr3 (41-482)||(4169039-4169468)
chr3 (108-273)||(42637956-42638121)
chr3 (101-319)||(3785860-3786078)
chr3 (101-319)||(3823549-3823768)
chr3 (122-319)||(9710738-9710929)
chr3 (108-324)||(19280093-19280306)
chr3 (101-297)||(1705663-1705857)
chr3 (151-316)||(11509804-11509969)
chr3 (109-281)||(44080192-44080364)
chr3 (108-291)||(26308640-26308823)
chr3 (119-260)||(5341833-5341974)
chr3 (101-232)||(22432315-22432446)
chr3 (108-230)||(31545603-31545725)
chr3 (108-267)||(19624256-19624414)
chr3 (102-320)||(27707571-27707788)
chr3 (101-217)||(42481300-42481416)
chr3 (146-281)||(23163264-23163400)
chr3 (127-204)||(27335402-27335479)
chr3 (117-205)||(13358101-13358189)
chr3 (201-298)||(31545714-31545811)
chr3 (126-266)||(27079314-27079453)
chr3 (126-266)||(27085111-27085250)
chr3 (101-266)||(34627292-34627453)
chr3 (204-299)||(26308553-26308648)
chr3 (127-204)||(27365008-27365085)
chr3 (201-297)||(3823750-3823845)
chr3 (201-297)||(22432428-22432524)
chr3 (200-299)||(18733572-18733670)
chr3 (200-299)||(27335307-27335406)
chr3 (156-263)||(41571797-41571904)
chr3 (116-178)||(11501309-11501371)
chr3 (204-297)||(19280298-19280391)
chr3 (127-204)||(27326047-27326124)
chr3 (127-204)||(27332284-27332361)
chr3 (223-290)||(5341996-5342063)
chr3 (117-192)||(39126189-39126263)
chr3 (201-297)||(3786060-3786153)
chr3 (204-281)||(27040683-27040760)
chr3 (201-250)||(34164326-34164375)
chr3 (214-281)||(11501244-11501310)
chr3 (136-186)||(23163787-23163837)
chr3 (201-267)||(39126263-39126329)
chr3 (200-273)||(33488333-33488406)
chr3 (223-279)||(13358996-13359052)
chr3 (124-162)||(11509989-11510027)
chr3 (253-319)||(31545424-31545490)
chr3 (240-289)||(1705593-1705642)
chr3 (201-265)||(18733430-18733495)
[»] chr2 (13 HSPs)
chr2 (103-319)||(43900426-43900642)
chr2 (108-320)||(30906051-30906263)
chr2 (116-297)||(45305887-45306067)
chr2 (1-236)||(1400668-1400901)
chr2 (101-231)||(28527316-28527445)
chr2 (28-204)||(33667328-33667506)
chr2 (201-297)||(1400689-1400785)
chr2 (101-284)||(7378463-7378643)
chr2 (201-291)||(28527244-28527334)
chr2 (201-297)||(33667413-33667509)
chr2 (223-297)||(41212426-41212500)
chr2 (203-297)||(30905966-30906060)
chr2 (127-181)||(34175155-34175209)
[»] chr4 (30 HSPs)
chr4 (129-297)||(9808994-9809162)
chr4 (104-297)||(17633337-17633530)
chr4 (117-297)||(9810680-9810860)
chr4 (101-317)||(16583496-16583712)
chr4 (126-297)||(55666844-55667013)
chr4 (108-317)||(19596680-19596891)
chr4 (126-320)||(8740809-8741003)
chr4 (101-236)||(1966826-1966961)
chr4 (108-277)||(33179759-33179928)
chr4 (126-267)||(35544438-35544578)
chr4 (117-279)||(2433654-2433811)
chr4 (108-221)||(33249616-33249729)
chr4 (110-266)||(42908520-42908675)
chr4 (200-291)||(24669270-24669361)
chr4 (101-281)||(14351000-14351178)
chr4 (127-266)||(24669123-24669274)
chr4 (204-289)||(1966758-1966841)
chr4 (170-236)||(20874814-20874880)
chr4 (201-299)||(42908666-42908763)
chr4 (201-281)||(14351160-14351240)
chr4 (223-299)||(17633255-17633331)
chr4 (225-319)||(19746939-19747033)
chr4 (225-319)||(19792773-19792867)
chr4 (207-281)||(9810866-9810941)
chr4 (231-318)||(25007625-25007711)
chr4 (188-226)||(1966978-1967016)
chr4 (203-297)||(19596882-19596977)
chr4 (204-286)||(8740715-8740796)
chr4 (223-281)||(9809196-9809254)
chr4 (228-296)||(33249554-33249622)
[»] chr6 (44 HSPs)
chr6 (101-297)||(22608281-22608476)
chr6 (117-297)||(33815025-33815198)
chr6 (103-278)||(10304695-10304870)
chr6 (118-317)||(3222332-3222530)
chr6 (108-316)||(23595055-23595253)
chr6 (101-213)||(138708-138820)
chr6 (101-213)||(146729-146841)
chr6 (109-319)||(3620761-3620970)
chr6 (128-289)||(9474562-9474718)
chr6 (201-297)||(9068503-9068599)
chr6 (101-212)||(9068411-9068521)
chr6 (201-318)||(7706758-7706876)
chr6 (101-165)||(2430600-2430664)
chr6 (110-205)||(2834974-2835069)
chr6 (206-297)||(7915696-7915787)
chr6 (223-302)||(23595261-23595340)
chr6 (201-299)||(30056039-30056138)
chr6 (205-286)||(10304627-10304707)
chr6 (201-277)||(138650-138726)
chr6 (201-277)||(146671-146747)
chr6 (179-267)||(11108147-11108235)
chr6 (201-257)||(2430650-2430706)
chr6 (223-280)||(11108102-11108159)
chr6 (228-297)||(18980401-18980470)
chr6 (204-297)||(24386312-24386405)
chr6 (201-281)||(2835060-2835140)
chr6 (207-262)||(2365649-2365704)
chr6 (214-297)||(9068314-9068395)
chr6 (201-267)||(2430553-2430618)
chr6 (206-267)||(7706935-7706996)
chr6 (240-319)||(7915595-7915675)
chr6 (4-73)||(11108067-11108133)
chr6 (201-252)||(14524091-14524142)
chr6 (204-298)||(22608461-22608558)
chr6 (7-70)||(2430507-2430568)
chr6 (203-281)||(3222532-3222610)
chr6 (228-282)||(20084729-20084783)
chr6 (201-250)||(15341435-15341484)
chr6 (201-250)||(15341858-15341907)
chr6 (204-297)||(20084596-20084689)
chr6 (108-165)||(20084678-20084735)
chr6 (228-297)||(24386203-24386272)
chr6 (101-165)||(7706862-7706926)
chr6 (125-165)||(24386283-24386323)
[»] chr8 (29 HSPs)
chr8 (108-319)||(38606828-38607039)
chr8 (101-291)||(5321955-5322145)
chr8 (101-319)||(1251470-1251687)
chr8 (101-297)||(31273555-31273751)
chr8 (118-291)||(5573706-5573879)
chr8 (129-297)||(29367076-29367243)
chr8 (101-260)||(15714688-15714847)
chr8 (118-281)||(26493347-26493507)
chr8 (117-319)||(31596693-31596894)
chr8 (108-249)||(1240901-1241041)
chr8 (171-319)||(33286115-33286263)
chr8 (201-308)||(15714599-15714706)
chr8 (127-320)||(15233115-15233318)
chr8 (201-299)||(5573877-5573976)
chr8 (203-286)||(38606754-38606837)
chr8 (142-321)||(32959456-32959635)
chr8 (228-318)||(24576180-24576270)
chr8 (108-233)||(24575907-24576023)
chr8 (117-208)||(6809804-6809895)
chr8 (223-299)||(28700058-28700133)
chr8 (201-267)||(5321907-5321973)
chr8 (200-281)||(15233314-15233395)
chr8 (201-250)||(40502175-40502224)
chr8 (201-252)||(24919659-24919710)
chr8 (201-255)||(24919871-24919925)
chr8 (207-297)||(26493252-26493342)
chr8 (108-205)||(24537982-24538078)
chr8 (201-250)||(40502387-40502436)
chr8 (201-273)||(26914631-26914702)
[»] chr7 (31 HSPs)
chr7 (101-320)||(31303350-31303569)
chr7 (117-273)||(20556710-20556866)
chr7 (101-319)||(18312725-18312942)
chr7 (101-321)||(21548349-21548568)
chr7 (101-299)||(4290745-4290942)
chr7 (101-250)||(21589590-21589739)
chr7 (108-279)||(15958313-15958485)
chr7 (108-299)||(5083792-5083982)
chr7 (103-266)||(22740654-22740817)
chr7 (108-213)||(28804990-28805094)
chr7 (200-299)||(32964848-32964947)
chr7 (127-319)||(32964651-32964852)
chr7 (223-297)||(28804902-28804976)
chr7 (201-319)||(28805116-28805234)
chr7 (201-297)||(21589721-21589817)
chr7 (127-204)||(46943761-46943839)
chr7 (203-312)||(31303553-31303661)
chr7 (201-281)||(22033158-22033238)
chr7 (201-280)||(21548550-21548629)
chr7 (201-267)||(5083738-5083803)
chr7 (108-173)||(5174910-5174975)
chr7 (201-281)||(18312924-18313004)
chr7 (201-297)||(20556867-20556963)
chr7 (117-204)||(27523496-27523583)
chr7 (169-211)||(2887188-2887230)
chr7 (201-267)||(15958258-15958324)
chr7 (223-281)||(22032996-22033054)
chr7 (204-281)||(4290927-4291004)
chr7 (223-297)||(22740076-22740150)
chr7 (2-73)||(28804882-28804950)
chr7 (148-204)||(22033095-22033151)
[»] chr5 (29 HSPs)
chr5 (101-318)||(13312498-13312714)
chr5 (101-231)||(35922718-35922848)
chr5 (101-297)||(22169377-22169573)
chr5 (124-256)||(38521984-38522115)
chr5 (116-266)||(43461709-43461858)
chr5 (104-277)||(33958976-33959148)
chr5 (116-291)||(19621481-19621655)
chr5 (123-319)||(31189474-31189671)
chr5 (101-236)||(42034739-42034872)
chr5 (169-319)||(36169394-36169543)
chr5 (130-297)||(43262708-43262889)
chr5 (201-299)||(15221662-15221760)
chr5 (201-283)||(13312696-13312778)
chr5 (127-204)||(30704398-30704476)
chr5 (127-299)||(7155998-7156182)
chr5 (125-180)||(30045885-30045940)
chr5 (200-293)||(30704309-30704402)
chr5 (201-297)||(22169555-22169650)
chr5 (204-299)||(42034857-42034952)
chr5 (223-297)||(35922628-35922702)
chr5 (101-169)||(2477302-2477370)
chr5 (201-281)||(33958911-33958991)
chr5 (201-297)||(35922830-35922926)
chr5 (240-291)||(31189710-31189761)
chr5 (207-281)||(36169337-36169410)
chr5 (108-163)||(15221618-15221673)
chr5 (31-73)||(19621613-19621655)
chr5 (228-281)||(15221572-15221625)
chr5 (200-248)||(7156178-7156226)
[»] scaffold1126 (2 HSPs)
scaffold1126 (101-281)||(202-382)
scaffold1126 (204-299)||(121-217)
[»] chr1 (33 HSPs)
chr1 (101-297)||(29677078-29677263)
chr1 (116-322)||(34364128-34364332)
chr1 (101-266)||(34490140-34490304)
chr1 (118-258)||(25238436-25238575)
chr1 (101-320)||(5831430-5831648)
chr1 (101-230)||(29167803-29167931)
chr1 (101-281)||(38951840-38952023)
chr1 (116-236)||(42604199-42604319)
chr1 (117-281)||(517421-517585)
chr1 (200-296)||(5855201-5855297)
chr1 (204-297)||(34490289-34490382)
chr1 (164-282)||(9929834-9929951)
chr1 (128-204)||(2996025-2996101)
chr1 (127-262)||(9468064-9468199)
chr1 (201-297)||(13350903-13350999)
chr1 (204-291)||(5831633-5831720)
chr1 (226-299)||(13351008-13351081)
chr1 (203-265)||(38244801-38244863)
chr1 (101-165)||(2569960-2570024)
chr1 (201-281)||(38952005-38952085)
chr1 (204-267)||(29167756-29167818)
chr1 (127-267)||(5855056-5855205)
chr1 (201-299)||(29676999-29677096)
chr1 (223-280)||(25238596-25238653)
chr1 (201-297)||(2570006-2570101)
chr1 (201-297)||(2569876-2569974)
chr1 (201-250)||(24708074-24708123)
chr1 (239-300)||(28499662-28499723)
chr1 (201-258)||(38245012-38245069)
chr1 (202-250)||(17227500-17227548)
chr1 (116-155)||(9929739-9929778)
chr1 (208-281)||(9929662-9929735)
chr1 (215-291)||(2995928-2996003)
[»] scaffold0251 (1 HSPs)
scaffold0251 (116-297)||(10623-10804)
[»] scaffold0123 (1 HSPs)
scaffold0123 (108-281)||(24021-24195)
[»] scaffold0126 (2 HSPs)
scaffold0126 (177-319)||(21549-21689)
scaffold0126 (201-298)||(21432-21529)
[»] scaffold0043 (2 HSPs)
scaffold0043 (127-204)||(87035-87112)
scaffold0043 (201-297)||(86895-86991)
[»] scaffold0024 (1 HSPs)
scaffold0024 (127-204)||(112158-112235)
[»] scaffold0291 (1 HSPs)
scaffold0291 (127-204)||(5870-5947)
[»] scaffold0213 (2 HSPs)
scaffold0213 (207-267)||(24738-24798)
scaffold0213 (202-265)||(24932-24995)


Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 41 - 482
Target Start/End: Original strand, 4169039 - 4169468
Alignment:
Q  41 tttgtactattctgaaaaatttcagttaaccaatatggtatgcatgacctcannnnnnncagttgcatgaccaccattttttcagaatttatttggttaa 140  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||       |||||||||||| || |||||||||||||||||||||||||    
T  4169039 tttgtactactctgaaaaatttcagttaaccaatatggtatgcgtgacctcatttttt-cagttgcatgactactattttttcagaatttatttggttaa 4169137  T
Q  141 ctaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaaga 240  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||         |||| ||||| |||    
T  4169138 ctaaatggaaaaatagtggtcacgcacattttagttgcgttaccacatttttcagcttctaaatagtggtcacgcaa---------tgtgatcacataga 4169228  T
Q  241 ccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattcaaatacaaatgcggtggttct 340  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4169229 ccatatatttagttaactgaaattttcgagataggtacaaaagggt--acatattaaagttgactatcaatctttattcaaatacaaatgcagtggttct 4169326  T
Q  341 gagtcgatacttactttaatatggtggtaacgtgcagaaattggattggaaaaggtgtaatacttgcaatagagatggtgtaaacccagtgaaatcgttt 440  Q
    ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4169327 gaggcgatacctactttaatatggtggtaacgtgcaggaattggattggaaaaggtgtaatacttgcaatagagatggtgtaaacccagtgaaatcgttt 4169426  T
Q  441 gggatactatgatagtttcaactcttcaaatcacatgaaata 482  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  4169427 gggataccatgatagtttcaactcttcatatcacatgaaata 4169468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 108 - 273
Target Start/End: Original strand, 42637956 - 42638121
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| ||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42637956 tgaccactattttttcagaatttatttggttaactaagttgaaaaatagtggttacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 42638055  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 273  Q
    |||||||||||||| |||||||||||| | | ||||||||||||||||||||||||||| ||||||    
T  42638056 ggtcacgcaactgaaaaaatgtggtcatatataccatatatttagttaactgaaattttcgagagt 42638121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 101 - 319
Target Start/End: Complemental strand, 3786078 - 3785860
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt-cagcttc 199  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| |||||| ||||||     
T  3786078 agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacgcgcattttagttgcgtgaccatattttttcagctta 3785980  T
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||||| ||| || |||||||||||||| |||||||| | || ||||||||||||||| |||||||||||||| ||||||||| ||||| |    
T  3785979 taaatagtggtcacgtaacagaaaaaatgtggtcacacagaccataaaattggttaactgaaattttcgagagtggtacaaaggggtgtacacattaagg 3785880  T
Q  300 ttgactatcaatctttattc 319  Q
     || ||| ||||||||||||    
T  3785879 gtgtctaccaatctttattc 3785860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 101 - 319
Target Start/End: Complemental strand, 3823768 - 3823549
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt--cagctt 198  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||| ||||||  ||||||    
T  3823768 agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacacgcattttagttgcgtgaccatatttttttcagctt 3823670  T
Q  199 ctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 298  Q
     ||||||||||||||||||| || |||||||||||||| |||||||||| || ||||||||||||||| |||||||||||||| ||||||||| |||||     
T  3823669 ataaatagtggtcacgcaacagaaaaaatgtggtcacacagaccatataattggttaactgaaattttcgagagtggtacaaaggggtgtacacattaag 3823570  T
Q  299 gttgactatcaatctttattc 319  Q
    | || |||  |||||||||||    
T  3823569 ggtgtctactaatctttattc 3823549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 122 - 319
Target Start/End: Original strand, 9710738 - 9710929
Alignment:
Q  122 tcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactga 221  Q
    ||||||||||||||||||||||| || |||||||||||||| | | |||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||    
T  9710738 tcagaatttatttggttaactaagtggaaaaatagtggtcaagtgtattt-agttgcgtgaccacagttttcagcttctaagtagtggtcacgcaaccga 9710836  T
Q  222 taaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
     ||||| ||||||     ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| | |  ||| ||||||||||||    
T  9710837 aaaaatatggtca-----accatatatttggttaactgaaatttttcagagtggtacaaaggggtgtacatattaagggtttctaccaatctttattc 9710929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 108 - 324
Target Start/End: Complemental strand, 19280306 - 19280093
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| | ||||||| ||||||||||||||||||| || |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  19280306 tgaccactaatttttcaaaatttatttggttaactaagtggaaaa-tagtggtcacgcgaattttagttgcgtgaccacatttttcaacttctaaacagt 19280208  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 307  Q
    ||||||||| |||| |||||||||||||  ||||||||||||| ||||||| |||| |||   ||||||||||| |||||||||  |||| | || |||     
T  19280207 ggtcacgcatctgaaaaaatgtggtcactcagaccatatatttggttaactaaaatattt--tagtggtacaaaggggtgtacactttaagggtgtctac 19280110  T
Q  308 caatctttattcaaata 324  Q
    | |||||||||| ||||    
T  19280109 cgatctttattccaata 19280093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 1705663 - 1705857
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    ||||| |||||||| | |||| ||||| ||||||||||||||||  | |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1705663 agttgtatgaccactagttttccagaaattatttggttaactaaggggaaaaatagtggtcacgcgcattttagttgcatgaccatatttttcagcttct 1705762  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||||||||   ||||| || ||||| | | ||| ||||| |||||||||||||||| | | || |||| |||| |||||| |||||    
T  1705763 aaatagtggtcacgcaact--aaaaatatgatcacacatatcatgtatttggttaactgaaattttttacaatgatacacaaggatgtacacattaa 1705857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 151 - 316
Target Start/End: Complemental strand, 11509969 - 11509804
Alignment:
Q  151 aaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||| | | |  ||||||    
T  11509969 aaataggggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaataaaggtcacgcaagtgaaaaaatgtggtcacacaaatcgcatattt 11509870  T
Q  251 agttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttta 316  Q
     ||||  |||||||||| ||||||||||||| ||||||||| |||||   || |||||||||||||    
T  11509869 ggttatttgaaatttttaagagtggtacaaaggggtgtacacattaagtgtgtctatcaatcttta 11509804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 109 - 281
Target Start/End: Complemental strand, 44080364 - 44080192
Alignment:
Q  109 gaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtg 208  Q
    |||||| |||||| || ||||| ||||||||||||| || ||||||||||| ||||| ||||||||||  |||||||||||||||| |||||||||||||    
T  44080364 gaccactatttttccaaaatttttttggttaactaagtggaaaaatagtgggcacgcacattttagttt-gtgaccacatttttcaacttctaaatagtg 44080266  T
Q  209 gtcacgcaactg-ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||| | ||||| |||||||| |||  |||||||| ||||||||||||| || |||||||||||||    
T  44080265 gtcacgcaactgcaaaaaatatggtcacacagattatatatttggttaactgaaattgttcagagtggtacaaa 44080192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 108 - 291
Target Start/End: Original strand, 26308640 - 26308823
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| | |||| |||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  26308640 tgaccactaattttccagaatttatttggttaagtaagtggaaaaatagtggtcacgcgcattttaattgcgtgaccacattattcagcttctaaatagt 26308739  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    |||| |  || ||  ||||||||| |||| | |||||||||||  |||||||||| |||| |||||  ||||||  ||||||||    
T  26308740 ggtcccagaattggaaaaatgtggccacacaaaccatatatttgattaactgaaaattttcagagttatacaaagaggtgtaca 26308823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 5341974 - 5341833
Alignment:
Q  119 ttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaac 218  Q
    |||||||||||||||||||||||||| || ||||||||||||||   | ||||||||||  ||||||||||||||| ||||||||||||||||||||| |    
T  5341974 ttttcagaatttatttggttaactaagtggaaaaatagtggtcatatgtattttagttgtatgaccacatttttcaacttctaaatagtggtcacgcagc 5341875  T
Q  219 tgataaaatgtggtcacaaagaccatatatttagttaactga 260  Q
    | | ||||| |||||||| | |||||||||||| ||||||||    
T  5341874 taaaaaaatatggtcacacaaaccatatatttaattaactga 5341833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 22432446 - 22432315
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||||||||||| ||||||||| |||||||||||| |||||  || ||||||||||| ||| |||||||||||||  ||||||||||||||||||| |    
T  22432446 agttgcatgaccactattttttcataatttatttggtcaactatgtggaaaaatagtggacacacgcattttagttgattgaccacatttttcagctttt 22432347  T
Q  201 aaatagtggtcacgcaactgataaaatgtggt 232  Q
    ||||||||| ||||||||||| ||||| ||||    
T  22432346 aaatagtggacacgcaactgaaaaaatatggt 22432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 31545725 - 31545603
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| |||||| |||||||||||| ||||||||| |  |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  31545725 tgaccactatttttccagaatttattttgttaactaagtagaaaaatagtggtcatgcacattttagttgtgtgaccacatttttcagcttctaaatagt 31545626  T
Q  208 ggtcacgcaactgataaaatgtg 230  Q
    ||| || ||||||| ||||||||    
T  31545625 ggttactcaactgaaaaaatgtg 31545603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 108 - 267
Target Start/End: Complemental strand, 19624414 - 19624256
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| |||||| |||||||||| ||||||||||| || |||||||||||||||| |||||||||||| ||| |||||| ||| ||||| |||||| |    
T  19624414 tgaccacaatttttccagaatttatgtggttaactaagtggaaaaatagtggtcacgtgcattttagttgggtggccacatattttagcttataaata-t 19624316  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    |||||| |||||||  |||| || ||||  |||| ||||||||  |||||||||||||||    
T  19624315 ggtcacacaactgaagaaatatgatcacttagactatatatttgattaactgaaattttt 19624256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 320
Target Start/End: Complemental strand, 27707788 - 27707571
Alignment:
Q  102 gttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcta 201  Q
    |||||||| |||| |||||| ||||||||||||||||||  || ||||||||||||||||| || ||||||||||| | |||||||||||| || ||| |    
T  27707788 gttgcatgtccactatttttccagaatttatttggttaatcaagtgaaaaaatagtggtcatgcacattttagttgtgcgaccacattttttagtttcaa 27707689  T
Q  202 aatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagtt 301  Q
    ||| |||||||| ||| ||| ||||||||| |||| | |||||||||||  |||| |||| ||||| | | || || |||  ||| |||| ||||||| |    
T  27707688 aat-gtggtcacacaattgaaaaaatgtgggcacacaaaccatatatttgattaattgaatttttttaaaatgatataaagaggtatacaaattaaaggt 27707590  T
Q  302 gactatcaatctttattca 320  Q
    | | ||| |||||||||||    
T  27707589 gtcaatctatctttattca 27707571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 42481416 - 42481300
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||| ||||||||  ||||||||||||||||||||||||||||| |  ||||||| ||||||||  ||||||||||| ||||||| ||||||||| || |    
T  42481416 agttacatgaccattattttttcagaatttatttggttaactaagtagaaaaataatggtcacgtacattttagttgtgtgaccatatttttcagttttt 42481317  T
Q  201 aaatagtggtcacgcaa 217  Q
    |||||||||||||||||    
T  42481316 aaatagtggtcacgcaa 42481300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 23163400 - 23163264
Alignment:
Q  146 tgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgat--aaaatgtggtcacaaagacca 243  Q
    |||||||||| || ||||| |||||||||||| ||||||| |||||||||| |||| |||||||||| |||||||||  ||||||| |||||| ||||||    
T  23163400 tgaaaaaataatgatcacgtgcattttagttgtgtgaccatatttttcagc-tctacatagtggtcatgcaactgataaaaaatgtagtcacatagacca 23163302  T
Q  244 tatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||   |||||||| ||||| ||||||||||||||    
T  23163301 tatattagattaactgatattttcgagagtggtacaaa 23163264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 27335402 - 27335479
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||||||| || |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  27335402 atttatttggttaactaagtggaaaaatagtggtcacgtgtattttagttgtgtgaccacatttttcagcttctaaat 27335479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 13358101 - 13358189
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaata 205  Q
    |||||||| ||||||||||||||||||  || |||||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||    
T  13358101 ttttttcaaaatttatttggttaactatgtggaaaaatagtggtaacgcgcattttaattgtgtgaccatatttttcagcttctaaata 13358189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 31545714 - 31545811
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 298  Q
    ||||||||||||| ||||| | |||||||||||||| ||||||||||||  |||| ||||||||||| |||||| ||||||| | |||||||||||||    
T  31545714 aaatagtggtcacacaactaaaaaaatgtggtcacatagaccatatattaggttacctgaaatttttcagagtgatacaaaaagatgtacatattaaa 31545811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 27079314 - 27079453
Alignment:
Q  126 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagctt--ctaaatagtggtcacgcaactgata 223  Q
    |||||||||| |||||||| || ||||||  |||||||||||||||||| | |||||||||||||||    ||    |||| ||||||| |||||||| |    
T  27079314 aatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt---tttgaaaaaattgtggtcatgcaactgaaa 27079410  T
Q  224 aaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    || |||||||||| ||||||||||||| |||||| ||||||||    
T  27079411 aattgtggtcacacagaccatatatttggttaaccgaaatttt 27079453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 27085111 - 27085250
Alignment:
Q  126 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagctt--ctaaatagtggtcacgcaactgata 223  Q
    |||||||||| |||||||| || ||||||  |||||||||||||||||| | |||||||||||||||    ||    |||| ||||||| |||||||| |    
T  27085111 aatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt---tttgaaaaaattgtggtcatgcaactgaaa 27085207  T
Q  224 aaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    || |||||||||| ||||||||||||| |||||| ||||||||    
T  27085208 aattgtggtcacacagaccatatatttggttaaccgaaatttt 27085250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 266
Target Start/End: Original strand, 34627292 - 34627453
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt-cagcttc 199  Q
    |||||| |||| || |||||||  ||||||||||||||||||||||| ||||||| |||| ||  | ||||||||||||||||||||||||| | | ||     
T  34627292 agttgcgtgactactatttttttcgaatttatttggttaactaaatggaaaaataatggttacatgtattttagttgcgtgaccacatttttccgggttt 34627391  T
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    |||||||||  |  |||||||| ||||||| |||||| ||| ||||    |||||||||||||||||    
T  34627392 taaatagtgtccttgcaactgaaaaaatgt-gtcacacagatcata----tagttaactgaaatttt 34627453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 26308648 - 26308553
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||| ||||| | | |||||||||||| | ||||||||||||||||||||| |||||| | |||| |||||||  |||||||||||||||    
T  26308648 tagtggtcacacaactaaaacaatgtggtcacacaaaccatatatttagttaactgatatttttcaaagtgatacaaaaaagtgtacatattaaag 26308553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 27365008 - 27365085
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||| ||| || ||||||||||||||| || ||||||| |||||||| ||||||||||| ||||||||    
T  27365008 atttatttggttaattaagtggaaaaatagtggtcacacgtattttagctgcgtgactacatttttcagtttctaaat 27365085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 3823750 - 3823845
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||| | |||| ||||||||| |||| |||||||| |||||||| |||||||  |||| ||||||| ||||| |||||||||    
T  3823750 aaatagtggtcacgcaact-aaaaaacgtggtcacacagacaatatatttggttaactggaatttttctgagtagtacaaacgggtgaacatattaa 3823845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 22432428 - 22432524
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||| |||||| | ||||||| |||||| |||||||||||||  || ||| |||||||| | |||| |||||||||||||||| |||||    
T  22432428 aaatagtggtcatgcaactaaaaaaatgtagtcacacagaccatatatttgatttactcaaatttttcaaagtgctacaaaagggtgtacacattaa 22432524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 299
Target Start/End: Original strand, 18733572 - 18733670
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||| ||||||||||| | ||| |||||||||  | ||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||| |||||||    
T  18733572 taaatagttgtcacgcaactaagaaa-tgtggtcacccataccatatatttagttaacttaaatttttcagaatggtataaaggggtgtacacattaaag 18733670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 27335406 - 27335307
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||| ||||||||||| | |||||||||||||| | |||||||  || ||||||| ||| |||| ||| ||||||||| ||||||||| |||||||    
T  27335406 taaatagttgtcacgcaactaaaaaaatgtggtcacacataccatattattggttaactcaaaattttcagaatggtacaaaggggtgtacacattaaag 27335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 41571904 - 41571797
Alignment:
Q  156 gtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagtta 255  Q
    |||||||||  |||||||  || |||| ||||||||||| ||| ||||||||||||||| |||||| |||||||||| ||| | |||||||||||  ||     
T  41571904 gtggtcacgtacattttaactgtgtgatcacatttttcaacttttaaatagtggtcacgtaactgaaaaaatgtggttacatataccatatatttgattg 41571805  T
Q  256 actgaaat 263  Q
    ||||||||    
T  41571804 actgaaat 41571797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 11501371 - 11501309
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgc 178  Q
    ||||||| | ||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  11501371 atttttttaaaatttatttggttaactaattggaaaaatagtggtcacgcacattttagttgc 11501309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 19280298 - 19280391
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||| | ||| | ||||||| |||||| |||||||||||||  |||||| ||| |||| ||||||||||||| ||||||||| |||||    
T  19280298 tagtggtcacaccacttaaaaaatgttgtcacacagaccatatatttgattaactaaaaattttcagagtggtacaaacgggtgtacacattaa 19280391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 27326047 - 27326124
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||| |||||| || || |||||||||||||||  | ||||||||||||||||||||||||| || ||||||||    
T  27326047 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27326124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 27332284 - 27332361
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||| |||||| || || |||||||||||||||  | ||||||||||||||||||||||||| || ||||||||    
T  27332284 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 5341996 - 5342063
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtac 290  Q
    |||||||||||||| ||||||||||||   ||||||||||||||| ||||| ||||||| ||||||||    
T  5341996 aaaatgtggtcacacagaccatatattcgattaactgaaatttttcagagtcgtacaaaggggtgtac 5342063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 39126263 - 39126189
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattttt 192  Q
    |||||| | ||||||||||||||||||| || |||||||||| || ||||| |||||||||||| |||||||||||    
T  39126263 tttttttaaaatttatttggttaactaagtggaaaaatagtgatcgcgcgc-ttttagttgcgtaaccacattttt 39126189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 3786060 - 3786153
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||| | |||| ||||||||| |||| |||||||| |||||||| |||||||  |||||||  ||| ||||| |||||||||    
T  3786060 aaatagtggtcacgcaact-aaaaaacgtggtcacacagacaatatatttggttaactggaatttttctgagtggt--aaacgggtgaacatattaa 3786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 27040683 - 27040760
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||||||||| ||| |||| ||||| ||| ||||||||| |||||| ||||||||  ||||| |||||||    
T  27040683 tagtggtcacgcaactgaaaaattgtgatcacacagatcatatatttggttaaccgaaattttctagagtagtacaaa 27040760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 34164375 - 34164326
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||||    
T  34164375 aaatagtggtcacgcaccttataaaatgtggtcacacagaccatatattt 34164326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 11501310 - 11501244
Alignment:
Q  214 gcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||| |||||||||||||| ||||||||||||| ||||  ||||| |||| |||||||||||||    
T  11501310 gcaactga-aaaatgtggtcacacagaccatatatttggttatttgaaaattttcagagtggtacaaa 11501244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 23163837 - 23163787
Alignment:
Q  136 gttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccac 186  Q
    ||||||||| |||| ||||||||||||||  ||||||||||||||||||||    
T  23163837 gttaactaagtgaagaaatagtggtcacgtacattttagttgcgtgaccac 23163787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 39126263 - 39126329
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    ||||||| ||||||||||| | ||||||| |||||| ||| ||||||||| ||||||| ||||||||    
T  39126263 aaatagtagtcacgcaactaaaaaaatgttgtcacacagatcatatatttggttaacttaaattttt 39126329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 33488333 - 33488406
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 273  Q
    |||||||||||| ||||||| | || ||| ||||| | | ||||||||||||||||||| |||||||| |||||    
T  33488333 taaatagtggtcgcgcaactaaaaatatgcggtcatacataccatatatttagttaacttaaatttttcagagt 33488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 13358996 - 13359052
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtaca 279  Q
    ||||| || ||||| |||||||||||||| ||||||||||||||  |||||||||||    
T  13358996 aaaatatgatcacacagaccatatatttaattaactgaaattttccagagtggtaca 13359052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 11510027 - 11509989
Alignment:
Q  124 agaatttatttggttaactaaatgaaaaaatagtggtca 162  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  11510027 agaatttatttagttaactaattgaaaaaatagtggtca 11509989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 31545490 - 31545424
Alignment:
Q  253 ttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    |||||||||||||| |||||| ||||||| || | |||| ||||||| || ||| ||||||||||||    
T  31545490 ttaactgaaattttcgagagtagtacaaagggatatacacattaaaggtgtctaccaatctttattc 31545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 1705642 - 1705593
Alignment:
Q  240 accatatatttagttaactgaaatttttgagagtggtacaaaagggtgta 289  Q
    |||||||||||||| |||| |||||||| ||||||||| ||| |||||||    
T  1705642 accatatatttagtaaacttaaatttttcagagtggtagaaaggggtgta 1705593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 18733495 - 18733430
Alignment:
Q  201 aaatagtggtcacgcaactga-taaaatgtggtcacaaagaccatatatttagttaactgaaattt 265  Q
    ||||||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  18733495 aaatagtagtcacgcaaccgaataaaatgtggtaacacaaaccatatatttggttaattgaaattt 18733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 103 - 319
Target Start/End: Complemental strand, 43900642 - 43900426
Alignment:
Q  103 ttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaa 202  Q
    |||| ||||| | |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43900642 ttgcgtgacccctattttttcagaatttatttggttaactaaatagaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttctaa 43900543  T
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttg 302  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||||| | | |||| ||||||  ||    
T  43900542 atagtggtcacacaactgaaaaaatgtgatcacacagaccatatatttagttacctgaaattttcgagagtggtacaaaatgatctacacattaaaagtg 43900443  T
Q  303 actatcaatctttattc 319  Q
     ||||||||||||||||    
T  43900442 tctatcaatctttattc 43900426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 108 - 320
Target Start/End: Original strand, 30906051 - 30906263
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| || ||| || |||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30906051 tgaccactatgtttccataatttatttgcttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcatttaaatagt 30906150  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 307  Q
    ||||||| |||||| |||  ||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||  ||     
T  30906151 ggtcacgaaactgaaaaatggtggtcacgcagaccatatatttggttaactgaaatttttcagagtggtacaaaagggtgtacacattaaaggtgtgtac 30906250  T
Q  308 caatctttattca 320  Q
    | |||||||||||    
T  30906251 ccatctttattca 30906263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 116 - 297
Target Start/End: Complemental strand, 45306067 - 45305887
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 215  Q
    ||||||| |||||||||| |||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  45306067 atttttttagaatttattcggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtggccacatttttcagcttttaaat-gtggtcacgc 45305969  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||| ||||| |||||| | |||| ||||||||  ||||||||||||||| ||||||||||||| | |||||||||||||    
T  45305968 aactgaaaaaatatggtcatacagactatatatttgattaactgaaattttttagagtggtacaaaggagtgtacatattaa 45305887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1400668 - 1400901
Alignment:
Q  1 agcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa---tatggtatgcatgacctcannnnn 97  Q
    |||||| |||||||| |||||||||||   ||||||  | ||||||| | |||||||||||||||||||||||   |||||||||  ||||| ||         
T  1400668 agcaataataggtagacacccttaatg---tgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacattttt 1400764  T
Q  98 nncagttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagct 197  Q
       |||||| ||||||| |||||| || ||||||||||||||||||| || |||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  1400765 ta-agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaatagtgatcacgcgcatttttgttgtgtgaccacatttttcagct 1400863  T
Q  198 tctaaatagtggtcacgcaactgataaaatgtggtcaca 236  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1400864 tctaaatagtggtcacgcaactga-aaaatgtggtcaca 1400901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 28527316 - 28527445
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| |||||| |||||||||||||||||||||| || ||||||||||||||| ||||| |||||| |||||| ||||||| ||||||||    
T  28527316 agttgcgtgaccactatttttccagaatttatttggttaactaattggaaaaatagtggtcacacgcatgttagtt-cgtgacaacattttccagcttct 28527414  T
Q  201 aaatagtggtcacgcaactgataaaatgtgg 231  Q
    ||||  ||||||||||||| | |||||||||    
T  28527415 aaattatggtcacgcaactaaaaaaatgtgg 28527445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 204
Target Start/End: Complemental strand, 33667506 - 33667328
Alignment:
Q  28 atatgtacattcatttgtactattctgaaaaatttcagttaaccaa---tatggtatgcatgacctcannnnnnncagttgcatgaccaccattttttca 124  Q
    ||||||||| || ||||||| | |||||||||||| ||||||||||   ||||||||| |||| | ||        |||||| ||||||| |||||||||    
T  33667506 atatgtacactcttttgtaccactctgaaaaattttagttaaccaaatatatggtatgtatgaacacatttttta-agttgcgtgaccactattttttca 33667408  T
Q  125 gaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||| ||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||    
T  33667407 gaatatatttggttaactaagtggaaaaatagtggttacgcacattttaattgcgtgaccacatttttcaacttctaaat 33667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 1400785 - 1400689
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||| | |||||||||||||| | ||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  1400785 aaatagtggtcacgcaacttaaaaaatgtggtcacacataccatatatttggttaactgaaatttttcagattggtacaaaagggtgtacacattaa 1400689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 101 - 284
Target Start/End: Original strand, 7378463 - 7378643
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| |||| || ||||||| | |||||| | |||||| ||| || || |||||||||||| | |||||||||||||| |||| |||||| |||||||    
T  7378463 agttgcgtgactactatttttttaaaatttaat-ggttaattaagtggaataatagtggtcacacacattttagttgcgtcaccatattttt-agcttct 7378560  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagg 284  Q
    |||| ||||| |||||||||| ||||| |||||||| | ||||||||||| ||||||||||||||||  || |||| |||||||    
T  7378561 aaat-gtggttacgcaactgaaaaaatatggtcacacaaaccatatattttgttaactgaaatttttctgaatggtgcaaaagg 7378643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 28527334 - 28527244
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||    
T  28527334 aaatagtggtcacgcaactaaaaaaatgtggtcacacagaccatatatttggttagctgaaatttttcaaagtggtacaaaggggtgtaca 28527244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 33667413 - 33667509
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||| | |||||||| ||| | | ||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||    
T  33667413 aaatagtggtcacgcaacttaaaaaatgtgttcatacataccatatatttggttaactaaaatttttcagagtggtacaaaagagtgtacatattaa 33667509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 41212426 - 41212500
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||| |||| ||||||||||    
T  41212426 aaaatgtggtcacacagaccatatatttggttaacttaaatttttcagagtggtacaaaggggtatacatattaa 41212500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 30906060 - 30905966
Alignment:
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||| ||||| |  ||||||||||||| |||| |||||| | ||||||| ||| |||| ||| || |||||| || |||||| |||||    
T  30906060 atagtggtcacacaactaaataaatgtggtcacacagacaatatatctggttaactaaaaattttcagaatgttacaaagggatgtacacattaa 30905966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 34175209 - 34175155
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtg 181  Q
    |||||||||||||||||| || ||||||||  ||||| | |||||||||||||||    
T  34175209 atttatttggttaactaagtggaaaaatagcagtcacacacattttagttgcgtg 34175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 129 - 297
Target Start/End: Complemental strand, 9809162 - 9808994
Alignment:
Q  129 ttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatg 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  9809162 ttatttggttaactaaatggaaaaatagtggtcacgcgcatttgagttgcgtgactacatttttcagcttctaaatagtggtcacgcaactgaaaaaatg 9809063  T
Q  229 tggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||  |||||||||||||||||||||||| ||||| | || ||||||||||||||||||||||||    
T  9809062 tggtcacgcagaccatatatttagttaactgaattttttcatagcggtacaaaagggtgtacatattaa 9808994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 104 - 297
Target Start/End: Original strand, 17633337 - 17633530
Alignment:
Q  104 tgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcag-cttctaa 202  Q
    ||||||||||| |||| | || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||     
T  17633337 tgcatgaccacaatttgtccaaaatttatttggttaactaagttaaaaaatagtggtcacgcgcattttagttgcgtgaccatatttttcaaacttctag 17633436  T
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    || |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||||||    
T  17633437 at-gtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttggttaactgaaatttttcaaagtggtacaaaggggtgtacatattaa 17633530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 9810860 - 9810680
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 216  Q
    |||||||| || ||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  9810860 ttttttcataaattatttggttaactaaatggaaaaatagaggtcacgcacatttgagttgcgtgactacattttttagcttctaaatagtggtcacgca 9810761  T
Q  217 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||| |||||||||| ||  | |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  9810760 actgaaaaaatgtggtaacgcaaaccatatatttaattaactgaaatttttcatagtggtacaaaagggtgtacatattaa 9810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 101 - 317
Target Start/End: Complemental strand, 16583712 - 16583496
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| |||| || |||||  || ||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  16583712 agttgcgtgactactattttaccataatttatttggttaattaagtggaaaaatagtggtcacgcgcattttagttgcatgatcatatttttcagcttct 16583613  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    ||||||||||||||||||||| ||||||||||||||   ||||||||||| ||||||||||||||| |||||||||||||| || |||||  ||||| |     
T  16583612 aaatagtggtcacgcaactgaaaaaatgtggtcacatcaaccatatatttggttaactgaaattttcgagagtggtacaaagggatgtacgcattaaggg 16583513  T
Q  301 tgactatcaatctttat 317  Q
    || ||| ||||||||||    
T  16583512 tgtctaccaatctttat 16583496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 126 - 297
Target Start/End: Original strand, 55666844 - 55667013
Alignment:
Q  126 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaa 225  Q
    |||||||||| |||||||| || ||||||||||||||||  |||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||| |||    
T  55666844 aatttatttgcttaactaagtggaaaaatagtggtcacgaacattttagtt-cgtgaccacgtttttcagcttataaataatggtcacgcaactga-aaa 55666941  T
Q  226 atgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| | |||||||||||||    
T  55666942 atgtggtcacacagaccatatatttagttaactgaaattttcgaaagtggtacaaaggagtgtacatattaa 55667013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 108 - 317
Target Start/End: Complemental strand, 19596891 - 19596680
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| || |||||||||||||||||||||||||| ||   ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
T  19596891 tgaccactatgttttcagaatttatttggttaactaagtgggtaaatagtagtcatgcgcattttagttgcgtgaccacatttttcagcttctaaataat 19596792  T
Q  208 ggtcacgcaactg--ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgact 305  Q
    ||| || || |||  | |||||||||||||   |||||||||||| || ||| || |||||| ||||||||||||| ||||||||| ||||||| || ||    
T  19596791 ggttacacagctgaaaaaaaatgtggtcacgctgaccatatatttggtcaacagagatttttcagagtggtacaaaggggtgtacacattaaagatgtct 19596692  T
Q  306 atcaatctttat 317  Q
    ||||||||||||    
T  19596691 atcaatctttat 19596680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 126 - 320
Target Start/End: Original strand, 8740809 - 8741003
Alignment:
Q  126 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactg-ataa 224  Q
    ||||||||| ||||||||| |  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| | ||    
T  8740809 aatttatttagttaactaagtagaaaaatagtggtcacgcgcattttagta-cgtgaccacatttttcagcttctaaatagtgatcacgcaactgaaaaa 8740907  T
Q  225 aatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattca 320  Q
    ||| |||||||| ||| |||| ||||  |||||||||| ||||||||||| ||||||||  |||||| ||| ||| || ||| | |||||||||||    
T  8740908 aatatggtcacacagatcatacatttgattaactgaaaattttgagagtgatacaaaagaatgtacacattgaagatgtctaccgatctttattca 8741003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 1966826 - 1966961
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | |||| |||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1966826 agttgcgtgaccactagttttccagaatttatttggttaattaagtggaaaaatagtggtcacgcgcattt-agttgcgtgaccacatttttcagcttct 1966924  T
Q  201 aaatagtggtcacgcaact-gataaaatgtggtcaca 236  Q
    |||||||||||||||||||  | ||||||||||||||    
T  1966925 aaatagtggtcacgcaactaaaaaaaatgtggtcaca 1966961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 33179759 - 33179928
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| | ||||| |||||||||||| |||||||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||    
T  33179759 tgaccactacttttttagaatttatttgattaactaagtggaaaaatagtggtcacacgcattttagttgtgtggccacatttttcactttctaaatagt 33179858  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 277  Q
    ||||||||| |||| || || |||| ||| | ||||||||||||||||| | ||||||| || |||||||    
T  33179859 ggtcacgcagctgaaaagatatggtaacacataccatatatttagttaattaaaattttcgatagtggta 33179928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 267
Target Start/End: Original strand, 35544438 - 35544578
Alignment:
Q  126 aatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaa 225  Q
    ||||||||| ||||| ||| || |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |||| || |||    
T  35544438 aatttatttagttaattaagtggaaaaatagtgatcacacgcattt-agttgcgtgaccacatttttcagcttctaaatagtggtcatacaacggaaaaa 35544536  T
Q  226 atgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    ||||| ||||| | |||||||||||  |||||||||||||||    
T  35544537 atgtgatcacacataccatatatttgattaactgaaattttt 35544578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 279
Target Start/End: Complemental strand, 2433811 - 2433654
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 216  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||| |||||||  || | |||||||||||||||||||||||||||||||||  ||    
T  2433811 ttttttcataatttatttggttaacaaagtgaaaaaatagtggtcacgtgcatttttttt-catgaccacatttttcagcttctaaatagtggtcaaaca 2433713  T
Q  217 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtaca 279  Q
    ||||| |||||||| ||||    | |||||||||  |||| |||||||||| | |||||||||    
T  2433712 actgaaaaaatgtgatcac----atcatatatttgattaattgaaatttttcaaagtggtaca 2433654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 33249616 - 33249729
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| | ||||||| |||||||||| |||||||  || ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||    
T  33249616 tgaccactactttttcaaaatttatttgattaactaggtggaaaaatagtggtcacacgcattttatgtgcgtgaccacatttttcaccttctaaatagt 33249715  T
Q  208 ggtcacgcaactga 221  Q
    ||||||||||||||    
T  33249716 ggtcacgcaactga 33249729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 110 - 266
Target Start/End: Complemental strand, 42908675 - 42908520
Alignment:
Q  110 accaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccaca-tttttcagcttctaaatagtg 208  Q
    ||||| |||||| ||||||||||||||||||||||  | ||| |||||||||||||||||||||||||||||| |||| ||||||| ||| ||||| |||    
T  42908675 accactatttttccagaatttatttggttaactaagaggaaacatagtggtcacgcgcattttagttgcgtgatcacattttttcaacttttaaat-gtg 42908577  T
Q  209 gtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    ||||| ||||||| ||||| |||||| | ||||||||||||| ||| ||| |||||||    
T  42908576 gtcacacaactga-aaaatatggtcaaacagaccatatatttggttcactaaaatttt 42908520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 24669270 - 24669361
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||  |||||| |||||||| ||||||||||||| |||||||||    
T  24669270 taaatagtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttgattaacttaaatttttcagagtggtacaaaggggtgtaca 24669361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 14351178 - 14351000
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| |||||  || ||||||||||||||||||| || |||||||||||||| |  |||||||||||||||| ||||| ||| ||||||     
T  14351178 agttgcgtgaccactattttgacaaaatttatttggttaactaagtggaaaaatagtggtcatggacattttagttgcgtgatcacatcttttagcttca 14351079  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||| | |||| ||  ||||||||  || | | |   ||||||| ||||||||||||||| ||||||||| ||||    
T  14351078 aaatagtggttatgcaattg--aaaatgtgaccatacaaattgtatatttggttaactgaaattttcgagagtggtgcaaa 14351000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 24669274 - 24669123
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgc 215  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |||||| || ||||           |||||||||||||||    
T  24669274 atttatttggttaactaagtgaaaaaatagtggtcacacgaattttagttgcgtgaccatatttttgagtttctaaatgctgaaaaaatagtggtcacgc 24669175  T
Q  216 aactgataaaatgtggtcacaaagaccat-atatttagttaactgaaatttt 266  Q
    |||||| |||||||||||||| | ||||| |||||| | ||||| |||||||    
T  24669174 aactgaaaaaatgtggtcacacataccataatatttggctaacttaaatttt 24669123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 1966841 - 1966758
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgta 289  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  1966841 tagtggtcacgcaactaa-aaaatgtggtcacacagaccatatatttggttaactgaaa-ttttcagagtggtacaaaagggtgta 1966758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 20874880 - 20874814
Alignment:
Q  170 tttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcaca 236  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  20874880 tttagttgcgttaccacatttttcagcttctaaaaagtgatcacgcaactgaaaaaatatggtcaca 20874814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 42908666 - 42908763
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||| || ||||| | |||||||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||| | ||| |||||||||||    
T  42908666 aaatagtggtgactcaactaa-aaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaatgagtgcacatattaaag 42908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 14351160 - 14351240
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||||||||||   ||||| |||||||| | ||||||||||| ||||||| || |||||||||||||||||||    
T  14351160 aaatagtggtcacgcaactagaaaaatatggtcacacaaaccatatatttggttaactaaattttttgagagtggtacaaa 14351240  T

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Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 17633331 - 17633255
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||  |||||||||||| | ||||||| |||||||    
T  17633331 aaaatgtggtcacacagaccatatatttggttaactaaaatttttcggagtggtacaaatgagtgtacacattaaag 17633255  T

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Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 19746939 - 19747033
Alignment:
Q  225 aatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    |||||||||| | ||||||| ||||||||||||||||||||| |||| || |||||| ||||||||| ||||||  || |||  |||||||||||    
T  19746939 aatgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaaaagtgtctactaatctttattc 19747033  T

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Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 19792867 - 19792773
Alignment:
Q  225 aatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    |||||||||| | ||||||| ||||||||||||||||||||| |||| || |||||| ||||||||| ||||||  || |||  |||||||||||    
T  19792867 aatgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaaaagtgtctactaatctttattc 19792773  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 9810866 - 9810941
Alignment:
Q  207 tggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||||||| | |||| |||||||||| ||||||||||||| ||||||| ||| |||  |||||||||||||    
T  9810866 tggtcacgcaactaaaaaaaatgtggtcacacagaccatatatttggttaacttaaaatttctagagtggtacaaa 9810941  T

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Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 25007625 - 25007711
Alignment:
Q  231 gtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttatt 318  Q
    |||||| ||||||||||||| ||||||||||||||| |||| |||||| |||||||||| | |||||   || ||| |||||||||||    
T  25007625 gtcacatagaccatatatttggttaactgaaattttcgagaatggtac-aaagggtgtatacattaagagtgtctaccaatctttatt 25007711  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 1966978 - 1967016
Alignment:
Q  188 tttttcagcttctaaatagtggtcacgcaactgataaaa 226  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1966978 tttttcagcttctaaatagtggtcacgcaactgaaaaaa 1967016  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 19596882 - 19596977
Alignment:
Q  203 atagtggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||| || | |||| ||||||||||   ||||||||||| |||||||||||||||  | |  ||||||||||| |||||| |||||    
T  19596882 atagtggtcacgcagctaaaaaaaatgtggtcacacgtaccatatatttggttaactgaaattttccaaaagggtacaaaaggatgtacacattaa 19596977  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 8740796 - 8740715
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggt 286  Q
    |||||||||| ||||| | |||||||||||||| | |||||||||||  ||||||  ||||||| |||||||| |||| ||||    
T  8740796 tagtggtcac-caactaaaaaaatgtggtcacataaaccatatatttgattaacttgaatttttcagagtggtgcaaaggggt 8740715  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 9809196 - 9809254
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||||| |||||||||| || ||||||| ||| |||  |||||||||||||    
T  9809196 aaaatgtggtcacacagaccatatacttggttaacttaaaatttctagagtggtacaaa 9809254  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 33249622 - 33249554
Alignment:
Q  228 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatatta 296  Q
    ||||||||| | |||| ||||||  ||||||| ||||||| ||| ||||| |||| |||||||||||||    
T  33249622 gtggtcacacataccacatatttgattaactggaattttttagaatggtataaaaaggtgtacatatta 33249554  T

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Target: chr6 (Bit Score: 125; Significance: 4e-64; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 22608476 - 22608281
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | |||||||||| ||||||| |||||||| | ||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  22608476 agttgcgtgaccactaatttttcagaaattatttgattaactaattcaaaaaatagtggtcatgcacattttagttgcatgaccacatttttcagcttct 22608377  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||    
T  22608376 aaatagtggtcacgcaactga-aaaatgtagtcacacagaccatatatttggttaactaaaatttttgagagtggtacaaaggggtgtacacattaa 22608281  T

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Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 33815025 - 33815198
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 216  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33815025 ttttttcagaatttatttggttaactaagtggaaaaatggtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 33815124  T
Q  217 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||| |||||||||||||| |||| |||||||||||||| |||| |||       ||||||||||||||||||| |||||    
T  33815125 actgaaaaaatgtggtcacacagactatatatttagttaattgaagttt-------tggtacaaaagggtgtacacattaa 33815198  T

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Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 10304695 - 10304870
Alignment:
Q  103 ttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaa 202  Q
    |||| |||||||  ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  10304695 ttgcgtgaccactttttttccagaatttatttggttaactaagtgaaaaaatagtggtcacgcgcattttagttgcgtgaccgtatttttctgcttctaa 10304794  T
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtac 278  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||| |||||| ||||    
T  10304795 atagtgatcacgcaactgaaaaaatgtggtcacacagaccatatatttagttcactaaaattttcgagagtagtac 10304870  T

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Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 118 - 317
Target Start/End: Complemental strand, 3222530 - 3222332
Alignment:
Q  118 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 217  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  3222530 ttttccagaatttatttggttaactaagtggaaaaatagtggtcacgtacattttagttgcgtgaccgcatttttcagcatttaaatagtggtcacgcaa 3222431  T
Q  218 ctgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttat 317  Q
    |||| |||||||||||||| | ||||||||||| ||||  |||||||||| |||||  ||| |||||||||||| ||||| | || ||||||||||||||    
T  3222430 ctgaaaaaatgtggtcacagacaccatatatttggttatttgaaatttttaagagtaatac-aaagggtgtacacattaagggtgtctatcaatctttat 3222332  T

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Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 108 - 316
Target Start/End: Complemental strand, 23595253 - 23595055
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| | ||||||||||||||||| ||||||||| || ||||||||||| ||||||        |||  ||||||||||||||||||||||||||||    
T  23595253 tgaccactaatttttcagaatttattttgttaactaagtggaaaaatagtggccacgcg--------ttg--tgaccacatttttcagcttctaaatagt 23595164  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 307  Q
     ||||| ||||| | ||||| |||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||||||| || ||      
T  23595163 tgtcacacaactaaaaaaatatggtcacacagaccatatatttagttaacttaaattttcgagagtgatacaaaagggtgtacacattaaaggtgtctcc 23595064  T

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Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 138708 - 138820
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  138708 agttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaaatagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttct 138807  T
Q  201 aaatagtggtcac 213  Q
    |||||||||||||    
T  138808 aaatagtggtcac 138820  T

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Target: chr6; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 146729 - 146841
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  146729 agttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaaatagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttct 146828  T
Q  201 aaatagtggtcac 213  Q
    |||||||||||||    
T  146829 aaatagtggtcac 146841  T

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Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 109 - 319
Target Start/End: Original strand, 3620761 - 3620970
Alignment:
Q  109 gaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtg 208  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    |||||||||| |||| ||||||||||| |||||||||||||    
T  3620761 gaccactattttttcagaatttatttggttaactaagtgaaaaaatagtggtcacatatattttagttgtgtgatcacatttttcaacttctaaatagtg 3620860  T
Q  209 gtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatc 308  Q
     |||||| | ||| ||| |||  || || |||||| ||||||  |||||||||||||| || | | |||||||  | |||||| ||||| |  |||||||    
T  3620861 atcacgcgattga-aaattgtattcgcacagaccacatatttgattaactgaaattttcgaaaatagtacaaagcgatgtacacattaaggccgactatc 3620959  T
Q  309 aatctttattc 319  Q
    |||||||||||    
T  3620960 aatctttattc 3620970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 9474718 - 9474562
Alignment:
Q  128 tttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaat 227  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||       ||||||||||||| |||||    
T  9474718 tttatttggttaactaagtgaaaaaatagtggtcacacgcatttta-tttcgtgaccacattttttagcttcta-------gtcacgcaactgaaaaaat 9474627  T
Q  228 gtg--gtcacaaagaccatatatttagttaactgaaattttt-gagagtggtacaaaagggtgta 289  Q
    |||  |||| | ||| |||||| |||| ||||||||||||||  |||||||||||||||| ||||    
T  9474626 gtggtgtcatatagatcatatagttagctaactgaaatttttcaagagtggtacaaaaggatgta 9474562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 9068503 - 9068599
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||| | |||||||||||||| | |||||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||    
T  9068503 aaatagtggtcacgcaactaaaaaaatgtggtcacacataccatatatttgattaactaaaatttttcagagtggtacaaaagggtgtacacattaa 9068599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 9068521 - 9068411
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| |||||| ||||| ||||||| ||| |||| || |||||||||  ||||||||||||||| || |||||||||||||||||||| |    
T  9068521 agttgcgtgaccactatttttccagaacttatttgttta-ctaagtggaaaaatagtaatcacgcgcattttagatgtgtgaccacatttttcagctttt 9068423  T
Q  201 aaatagtggtca 212  Q
    ||||||||||||    
T  9068422 aaatagtggtca 9068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 7706876 - 7706758
Alignment:
Q  201 aaatagtggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||||||||||| |||| |||||||||| | ||||||||||   |||||| |||||||| ||| |||||||||||| |||||| |||||||    
T  7706876 aaatagtggtcacgcaactgaaaaaaatgtggtcacacaaaccatatattatattaactaaaatttttcagaatggtacaaaaggatgtacacattaaag 7706777  T
Q  300 ttgactatcaatctttatt 318  Q
     ||  ||||||||||||||    
T  7706776 gtgtttatcaatctttatt 7706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 2430600 - 2430664
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 165  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  2430600 agttgcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgc 2430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 2835069 - 2834974
Alignment:
Q  110 accaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaata 205  Q
    ||||| |||||| || ||||||||| |||| |||| || ||||||| |||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  2835069 accactatttttccataatttatttagttagctaagtggaaaaataatggtcacgcgtattttagttgcatgaccatatttttcagcttttaaata 2834974  T

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Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 7915696 - 7915787
Alignment:
Q  206 gtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||| | ||| |||||||||| |||| ||||||||  ||||||||||||||| ||||||||| || |||||||||| |||||    
T  7915696 gtggtcacgcaactaaaaaattgtggtcacacagacgatatatttgattaactgaaatttttcagagtggtaaaagagggtgtacacattaa 7915787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 23595261 - 23595340
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttg 302  Q
    |||||||||||||| |||| |||||||| ||||| |||||||||| |||||  |||||||||||||||||||||| ||||    
T  23595261 aaaatgtggtcacacagactatatatttggttaattgaaattttttagagtaatacaaaagggtgtacatattaaggttg 23595340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 30056138 - 30056039
Alignment:
Q  201 aaatagtggtcacgcaactgataaaa-tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||||||||  | |||| |||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||| ||| ||| | |||||||    
T  30056138 aaatagtggtcacgcaacaaaaaaaaatgtggtcacatagaccatatatttggttaactgaaattttttagagttgtacaaaggggagtatacattaaag 30056039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 10304707 - 10304627
Alignment:
Q  205 agtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggt 286  Q
    ||||||||||||| | | ||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  10304707 agtggtcacgcaattaa-aaagtgtggtcacacagaccatatatttggttaactgaaattttttagagtggtacaaaggggt 10304627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 138726 - 138650
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 277  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||| ||||||| || ||||| |||||||||    
T  138726 aaatagtggtcacgcaactaagaaaatgtggccacacagaccatatatttggttaactaaatttttttagagtggta 138650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 146747 - 146671
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 277  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||| ||||||| || ||||| |||||||||    
T  146747 aaatagtggtcacgcaactaagaaaatgtggccacacagaccatatatttggttaactaaatttttttagagtggta 146671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 11108147 - 11108235
Alignment:
Q  179 gtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    |||||||||||||||||||| |  | ||||||||||||||||| |||||||||||||| | | ||||||||| ||||| |||| |||||    
T  11108147 gtgaccacatttttcagcttattgacagtggtcacgcaactgaaaaaatgtggtcacacaaatcatatatttggttaattgaatttttt 11108235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 2430650 - 2430706
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaac 257  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||||    
T  2430650 aaatagtggtcacgcaactgaaaaaatgtggtcacacaaaccatatatttggttaac 2430706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 11108159 - 11108102
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaa 280  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||| ||||| ||||||    
T  11108159 aaaatgtggtcacacagaccatatatttggttaattgaaatttttcagagtagtacaa 11108102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 18980401 - 18980470
Alignment:
Q  228 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||| ||||||||||||||||||||| | |||||  |||||||||||||| ||||| || |||||    
T  18980401 gtggtcacatagaccatatatttagttaacttagattttgcagagtggtacaaaaaggtgtgcacattaa 18980470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 24386312 - 24386405
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||| |||||||||  | || ||||||||||| ||||||||||||| ||||||| |||||||| || |||||| ||| || |||||| |||||    
T  24386312 tagtgatcacgcaacaaaaaatatgtggtcacacagaccatatatttggttaacttaaatttttcagcgtggtataaagggatgtacacattaa 24386405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 2835060 - 2835140
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||| || ||||| | |||||||||||||| |||   ||||||| ||||||| |||||||| |||||||||||||    
T  2835060 aaatagtggttacacaactaaaaaaatgtggtcacacagatggtatatttggttaacttaaatttttcagagtggtacaaa 2835140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 2365649 - 2365704
Alignment:
Q  207 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaa 262  Q
    ||||||||||||||| |||||||||||||  | ||||||||||| |||||||||||    
T  2365649 tggtcacgcaactgaaaaaatgtggtcacgcataccatatatttggttaactgaaa 2365704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 9068395 - 9068314
Alignment:
Q  214 gcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||| |||||||||||| | |||||||||| || ||||||||| ||||| ||||||||||  |||||||||| |||||||    
T  9068395 gcaactga-aaaatgtggtcatacagaccatatacttggttaactgatattttcgagagtggta-taaagggtgtatatattaa 9068314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 2430618 - 2430553
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    |||||||||||| |||||| | ||||  |||||||| ||| ||||||||||||||||||||||||||    
T  2430618 aaatagtggtcatgcaactaaaaaaaa-tggtcacacagatcatatatttagttaactgaaattttt 2430553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 7706935 - 7706996
Alignment:
Q  206 gtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    |||||| ||||||| | ||||||| || ||| |||| |||||||||||||||||||||||||    
T  7706935 gtggtctcgcaactaaaaaaatgtagttacacagactatatatttagttaactgaaattttt 7706996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 7915675 - 7915595
Alignment:
Q  240 accatatatttagttaactgaaatttttg-agagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    |||| ||||||  |||||||||||||||  |||||| |||||||||||||||| ||||||| || ||| | ||||||||||    
T  7915675 accacatatttgattaactgaaattttttcagagtgatacaaaagggtgtacacattaaaggtgtctaccgatctttattc 7915595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 11108067 - 11108133
Alignment:
Q  4 aatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 73  Q
    |||| ||||||| ||| |||||||   |||||||||| |||||||| |||||||||||||| ||||||||    
T  11108067 aatggtaggtagacactcttaatg---tgtacattcacttgtactactctgaaaaatttcaattaaccaa 11108133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 14524142 - 14524091
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttag 252  Q
    |||||||||||||||| || | | |||||||||||| |||||||||||||||    
T  14524142 aaatagtggtcacgcaccttaaacaatgtggtcacacagaccatatatttag 14524091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 22608461 - 22608558
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatata---tttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 298  Q
    |||||||||||||||| | | ||| |||||||| ||| ||||||   ||| ||||||||||| |||| | | || |||||| ||||||||||||||||    
T  22608461 tagtggtcacgcaactaaaacaatatggtcacacagatcatataatatttggttaactgaaaattttcaaaatgatacaaaggggtgtacatattaaa 22608558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 2430507 - 2430568
Alignment:
Q  7 gataggtaggcacccttaatgatatgtacattcatttgtactattctg-aaaaatttcagttaac 70  Q
    ||||||||| |||||||||||   ||||||||| ||||||| |||||| ||||||||||||||||    
T  2430507 gataggtagacacccttaatg---tgtacattcctttgtaccattctgaaaaaatttcagttaac 2430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 3222532 - 3222610
Alignment:
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||| ||||   |||||||||||||| |||||||||||||  |||||| |  ||||| |||||| ||||||    
T  3222532 atagtggtcacgtaactagaaaaatgtggtcacacagaccatatatttgattaactaatcttttttagagtgatacaaa 3222610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 20084729 - 20084783
Alignment:
Q  228 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaa 282  Q
    ||||||||| ||||||||||||||||||||| | |||||  ||| ||||||||||    
T  20084729 gtggtcacatagaccatatatttagttaacttagattttgcagaatggtacaaaa 20084783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 15341435 - 15341484
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    |||||||||||||||| || | |||||||| ||||| |||||||||||||    
T  15341435 aaatagtggtcacgcatcttaaaaaatgtgttcacacagaccatatattt 15341484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 15341858 - 15341907
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    ||||||||||||| || || | |||||||||||||| |||||||||||||    
T  15341858 aaatagtggtcacacaccttaaaaaatgtggtcacacagaccatatattt 15341907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 20084689 - 20084596
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||| |||||||||  | || ||||||||||| | ||||||||||| ||||||| |||||||| ||  ||||| ||| || |||||| |||||    
T  20084689 tagtgatcacgcaacataaaatatgtggtcacacataccatatatttggttaacttaaatttttcagcatggtataaagggatgtacacattaa 20084596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 20084735 - 20084678
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 165  Q
    ||||||| ||| |||  |||||||||||||||||||| ||||||| ||||| ||||||    
T  20084735 tgaccactattatttttgaatttatttggttaactaagtgaaaaagtagtgatcacgc 20084678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 24386272 - 24386203
Alignment:
Q  228 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||| |||||||||||||||||||||   ||||   ||||||||| |||| |||||||| |||||    
T  24386272 gtggtcacatagaccatatatttagttaacttggatttggcagagtggtataaaaaggtgtacacattaa 24386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 7706926 - 7706862
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 165  Q
    |||||| |||| || |||||| ||||| |||||||||||  ||| || |||||||||||||||||    
T  7706926 agttgcgtgacaactatttttccagaacttatttggttacttaagtggaaaaatagtggtcacgc 7706862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 24386283 - 24386323
Alignment:
Q  125 gaatttatttggttaactaaatgaaaaaatagtggtcacgc 165  Q
    |||||||||||||||||||| ||||||| ||||| ||||||    
T  24386283 gaatttatttggttaactaagtgaaaaagtagtgatcacgc 24386323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 108 - 319
Target Start/End: Original strand, 38606828 - 38607039
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| || ||| |||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38606828 tgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacacgcattttcgttgcgtgaccacatttttcagcttctaaatagt 38606927  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactat 307  Q
    ||| |||||||||| |||||||||||||  | ||||||||| ||||||||||||||||| |||||| ||||||| ||||||||| ||||| | || |||     
T  38606928 ggtaacgcaactgaaaaaatgtggtcacgcaaaccatatatgtagttaactgaaattttggagagttgtacaaaggggtgtacacattaaggatgtctac 38607027  T
Q  308 caatctttattc 319  Q
    |||| |||||||    
T  38607028 caatatttattc 38607039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 5321955 - 5322145
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  5321955 agttgcgtgaccactatttttttagaatttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 5322054  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    ||||| || |||||||| ||| |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| |||||| | |||||||    
T  5322055 aaataatgatcacgcaattgaaaaaatgtgatcacacagaccatatatttggttaattgaaatttttgagagtgatacaaaggagtgtaca 5322145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 101 - 319
Target Start/End: Original strand, 1251470 - 1251687
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| ||  |||||||||||| ||| |||||||||| | ||| |||||||||||| || |    
T  1251470 agttgcgtgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcgcgcacattttagtt-catgatcacatttttcaggtttt 1251568  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    ||||||||||||||||||||| ||||||||||| || | | ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |     
T  1251569 aaatagtggtcacgcaactgaaaaaatgtggtctcacaaatcatatatttagttaactgaaattttcgagagtggtacaaatgggtgtacacattaagga 1251668  T
Q  301 tgactatcaatctttattc 319  Q
    || ||| ||||||||||||    
T  1251669 tgtctaccaatctttattc 1251687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 31273555 - 31273751
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||| ||||||||||| ||||||||||||||||||| | ||||||||||| | ||||| ||||||||| ||| |||||| ||||||||||||||    
T  31273555 agttgcgtgatcaccattttttaagaatttatttggttaacttagtgaaaaaatagcgttcacgtgcattttagctgcatgaccatatttttcagcttct 31273654  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||| |||||||||||||| || |||||| |||| |||||||||||||  |||| ||||||||| ||||||||||||||| ||| |||| |||||    
T  31273655 aaataggggtcacgcaactgaaaacatgtggccacatagaccatatatttgattaattgaaattttcgagagtggtacaaaaaggtatacacattaa 31273751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 118 - 291
Target Start/End: Complemental strand, 5573879 - 5573706
Alignment:
Q  118 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 217  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  5573879 tttttcaaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttccatgaccacatttttcaacttctaaatagtggtcacgcaa 5573780  T
Q  218 ctgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
     ||| ||||||| |||||| | | ||||||||| |||||||||||| || |||| || ||||||||||||||||    
T  5573779 ttgaaaaaatgtagtcacatatatcatatatttggttaactgaaatgttcgagaatgatacaaaagggtgtaca 5573706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 29367076 - 29367243
Alignment:
Q  129 ttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatg 228  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||     
T  29367076 ttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcaaaatagtggtcacacaattgaaaaaata 29367175  T
Q  229 tggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||| ||| ||||||||||||||||||| | |||||||  |||||| ||| || ||||||||| |||||    
T  29367176 tggttacatagaccatatatttagttaattaaaattttcaagagtgatac-aaggggtgtacacattaa 29367243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 101 - 260
Target Start/End: Original strand, 15714688 - 15714847
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| ||||||||  ||||||||||||||||||| || ||||||||||||||||  |||||||||| |||||||| |||||||||||| |    
T  15714688 agttgcgtgaccactattttttcgaaatttatttggttaactaagtggaaaaatagtggtcacggacattttagttacgtgaccatatttttcagctttt 15714787  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactga 260  Q
    ||||||| ||||| || |||| |||||||||| ||| |||||||||||||||||||||||    
T  15714788 aaatagtagtcacacagctgaaaaaatgtggttacacagaccatatatttagttaactga 15714847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 118 - 281
Target Start/End: Original strand, 26493347 - 26493507
Alignment:
Q  118 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 217  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||    
T  26493347 tttttcagaatttatttgattaactaaatggaaaaatagttgtcacgcgcattt-agttgcgtgaccacatttttcagcttctaaatagtagttacacaa 26493445  T
Q  218 ctgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||| |||||||| ||||| | |  |||||||| ||||| |||||||||| | |||||||||||    
T  26493446 ctgaaaaaatgtgatcacacaaa--atatatttggttaattgaaatttttaaaagtggtacaaa 26493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 117 - 319
Target Start/End: Complemental strand, 31596894 - 31596693
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 216  Q
    ||||| || ||||||||||||||| ||| || |||||||||| | || ||||||| |||||  ||||||||||||||| ||||||||||||||| |||||    
T  31596894 tttttccataatttatttggttaattaagtggaaaaatagtgattacacgcattt-agttgtctgaccacatttttcatcttctaaatagtggtaacgca 31596796  T
Q  217 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttta 316  Q
    ||||| |||||||||||||| | |||||||||||  ||||||| ||||||| | |||||||||||  ||||||||||||||   || ||| |||||||||    
T  31596795 actgaaaaaatgtggtcacacataccatatatttgattaactgtaatttttcaaagtggtacaaagaggtgtacatattaagagtgtctaccaatcttta 31596696  T
Q  317 ttc 319  Q
    |||    
T  31596695 ttc 31596693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 1240901 - 1241041
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| |||||| || ||||||||||||||||||| ||  |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  1240901 tgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcacgcacattttagtt-catgaccacatttttcagcttctaaatagt 1240999  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatt 249  Q
    |||||| ||||||| ||||| ||||| || | ||||||||||    
T  1241000 ggtcacacaactgaaaaaatatggtctcacacaccatatatt 1241041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 171 - 319
Target Start/End: Complemental strand, 33286263 - 33286115
Alignment:
Q  171 ttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgag 270  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||  ||||||||||||| ||||| | || ||||| ||    
T  33286263 ttagttgcgtgaccacatttttcagcttctaaaaagtggtcacgcaattgaaaaaatgtggtcacgcagaccatatatttggttaattaaatttttttag 33286164  T
Q  271 agtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    || |||||||| ||||||||| ||||| | || | | ||||||||||||    
T  33286163 aggggtacaaatgggtgtacacattaagggtgtccaccaatctttattc 33286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 201 - 308
Target Start/End: Complemental strand, 15714706 - 15714599
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    ||||||||||||||||||| | |||||||||||||| | | ||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||     
T  15714706 aaatagtggtcacgcaactaacaaaatgtggtcacataaatcatatatttagctaactgaaatttttcagagtggtacaaaaatgtgtacatattaaagg 15714607  T
Q  301 tgactatc 308  Q
    || |||||    
T  15714606 tgtctatc 15714599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 127 - 320
Target Start/End: Complemental strand, 15233318 - 15233115
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgc 215  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |           ||||||||||||||     
T  15233318 atttatttggttaattaagtgaaaaaatagtggtcatgcgcattttagttgcgtgaccacgtttttcaacttttaaatgctggaaaaatagtggtcacgt 15233219  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttt 315  Q
    |||||| |||||||| || || |||||||||||||  ||||||||||||||| ||| |||||| ||  | |||||| ||||||| |  | ||| ||||||    
T  15233218 aactga-aaaatgtgatcgcagagaccatatatttgattaactgaaatttttcagattggtacgaagagatgtacacattaaaggtatccatccatcttt 15233120  T
Q  316 attca 320  Q
    |||||    
T  15233119 attca 15233115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 5573877 - 5573976
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagacc-atatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||||||| | | |||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||    
T  5573877 aaatagtggtcacgcaattaaaaaaatgtggtcacaaagacatatatatttagttaactgaaatcttttagagtggtacaaaagagtgtacacattaaag 5573976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 286
Target Start/End: Complemental strand, 38606837 - 38606754
Alignment:
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggt 286  Q
    |||||||||||||| || | ||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  38606837 atagtggtcacgcagctaaaaaaatatggtcacacataccatatatttagttaactgaaatttttcagagtggtacaaaggggt 38606754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 321
Target Start/End: Complemental strand, 32959635 - 32959456
Alignment:
Q  142 taaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagac 241  Q
    |||||| ||||||||||||||| | ||||||||||| ||||||| |||||| ||||||| ||| ||||||||| || ||| |||||||| ||||| | |     
T  32959635 taaatggaaaaatagtggtcacacacattttagttgtgtgaccatattttttagcttcttaatggtggtcacgtaattgaaaaaatgtgatcacacaaat 32959536  T
Q  242 catatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattcaa 321  Q
    ||| ||||| |||||  |||| |||  | | | |||||||  |||||| | || |||| || ||| ||||||||||||||    
T  32959535 catgtatttggttaatcgaaaatttccataattgtacaaagtggtgtagacataaaaggtgtctaccaatctttattcaa 32959456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 24576180 - 24576270
Alignment:
Q  228 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttatt 318  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||| ||||  | || ||| |||||||||||    
T  24576180 gtggtcacacagaccatatatttggttaattgaaattttcgagagtggtacaaaggggtgtacacattacgggtgtctaccaatctttatt 24576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 24575907 - 24576023
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  ||         | |||  ||||||||||||||||||||||||    
T  24575907 tgaccactatttttccagaatttatttggttaaataagtgaaaaaatagtggtcacttgc---------gtgtggtcacatttttcagcttctaaatagt 24575997  T
Q  208 ggtcacgcaactgataaaatgtggtc 233  Q
    ||| ||| |||| | |||||||||||    
T  24575998 ggtaacgaaactcaaaaaatgtggtc 24576023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 6809895 - 6809804
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtg 208  Q
    |||| ||| ||||||||||||||| |||||| |||||||||||||||  | |||||||| | || ||||||||||| | ||| |||||||||    
T  6809895 ttttctcataatttatttggttaattaaatggaaaaatagtggtcacatgtattttagtcgagtaaccacattttttatcttttaaatagtg 6809804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 28700133 - 28700058
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| ||| || ||||||| | |||||| |||||||    
T  28700133 aaaatatggtcacata-accatatatttagttaactgaaattttttagaatgatacaaaatgatgtacacattaaag 28700058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 5321973 - 5321907
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    ||||||||||||||||||| | |||||||||||||| |  ||||||||||| |||||| ||| ||||    
T  5321973 aaatagtggtcacgcaactaaaaaaatgtggtcacacatgccatatatttaattaactcaaaatttt 5321907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 15233314 - 15233395
Alignment:
Q  200 taaatagtggtcacgcaact-gataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||||||| ||| || |||||| |||||||||| | || ||||||||| |||||| |||||||| |||||||||||||    
T  15233314 taaatagtggtcaagcacctagataaa-tgtggtcacacaaactatatatttaattaactaaaatttttcagagtggtacaaa 15233395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 40502175 - 40502224
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    |||||||||||||||| || | |||||||||||||| |||||||||||||    
T  40502175 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaccatatattt 40502224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 24919659 - 24919710
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttag 252  Q
    |||||||||||||||| || | |||||||||||||| ||| |||||||||||    
T  24919659 aaatagtggtcacgcaccttaaaaaatgtggtcacagagaacatatatttag 24919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 24919871 - 24919925
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagtta 255  Q
    |||||||||||||||| || | |||||||||||||| ||| ||||||||| ||||    
T  24919871 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaacatatatttggtta 24919925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 26493342 - 26493252
Alignment:
Q  207 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||| ||||||| | | |||||||||||| |||||||||||||  |||| | |||||||| | ||||||| ||||  ||||||| |||||    
T  26493342 tggtcgcgcaactaaaacaatgtggtcacatagaccatatatttgattaagtaaaattttttaaagtggtataaaaaagtgtacacattaa 26493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 24537982 - 24538078
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaata 205  Q
    ||||||| | |||| || |||||||||||||||| | ||| |||||||||||| || ||| ||  |||| | |||||| |||||| ||||||||||||    
T  24537982 tgaccactaattttccaaaatttatttggttaaccatatggaaaaatagtggtaacacgcgttgcagttacatgaccatattttt-agcttctaaata 24538078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 40502387 - 40502436
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    ||||||||||||| || || | |||||||||||||| |||||||||||||    
T  40502387 aaatagtggtcacacaccttaaaaaatgtggtcacacagaccatatattt 40502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 273
Target Start/End: Complemental strand, 26914702 - 26914631
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 273  Q
    |||||||||||||| |||| | |||||||| ||||| | | |||||||||||||| || |||||||| |||||    
T  26914702 aaatagtggtcacgtaactaa-aaaatgtgatcacacaaatcatatatttagttagcttaaatttttcagagt 26914631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 101 - 320
Target Start/End: Complemental strand, 31303569 - 31303350
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| || ||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31303569 agttgcgtgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcatgaccacatttttcagcttct 31303470  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||| ||||| ||| |||||||||||| |||||| |||||| || |||||| ||||| |     
T  31303469 aaatagtggtcacgcaattgaaaaaatgtggtcacgcagaccatgtatttggttgactgaaatttttcagagtgatacaaatggatgtacacattaaggg 31303370  T
Q  301 tgactatcaatctttattca 320  Q
    || ||| |||||||||||||    
T  31303369 tgtctaccaatctttattca 31303350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 117 - 273
Target Start/End: Complemental strand, 20556866 - 20556710
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgca 216  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20556866 ttttttcagaatttatttggttaactaagtggaaaaatattggtcacgcgtattttagttgcgtgaccacatttttcagcttctaaatagtggtcacaca 20556767  T
Q  217 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagt 273  Q
    ||||| ||||| ||||||||  |||||||||||| ||||||||||||||| ||||||    
T  20556766 actgaaaaaatatggtcacaccgaccatatatttggttaactgaaattttcgagagt 20556710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 101 - 319
Target Start/End: Complemental strand, 18312942 - 18312725
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| ||||||  |||||||||| |||||||||| || |||||||||||||||  ||||||||||||||||| |||||||| ||||||||    
T  18312942 agttgcgtgaccactatttttcaagaatttattaggttaactaagtggaaaaatagtggtcacatgcattttagttgcgtgagcacatttt-cagcttct 18312844  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    ||||||| || |||||||||| || ||||||||||| |||||||||||||  |||| ||||||||| |||||||||||||| |||| ||||  |||| |     
T  18312843 aaatagtagtgacgcaactgaaaatatgtggtcacagagaccatatatttgattaattgaaattttcgagagtggtacaaaggggtatacacgttaaggg 18312744  T
Q  301 tgactatcaatctttattc 319  Q
    || ||| ||||||||||||    
T  18312743 tgtctaccaatctttattc 18312725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 21548568 - 21548349
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| |||||| |||||||||||||||||||||| || ||||| |||||| |||||||||  |||||||||||||||||||||||||| |    
T  21548568 agttgcgtgaccactatttttccagaatttatttggttaactaagtggaaaaacagtggttacgcgcattcgagttgcgtgaccacatttttcagctttt 21548469  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    ||||| ||||||| ||||||| ||||| |||||||| | ||||||| |||  ||||||||||||||  |||||||||||||   ||||| |||||||||     
T  21548468 aaatattggtcacacaactgaaaaaatatggtcacacataccatat-tttgattaactgaaattttcaagagtggtacaaagaagtgtatatattaaagg 21548370  T
Q  301 tgactatcaatctttattcaa 321  Q
    || ||| | ||||||||||||    
T  21548369 tgtctaccgatctttattcaa 21548349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 101 - 299
Target Start/End: Complemental strand, 4290942 - 4290745
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||| || || |||||||||||||||||||||| |||||    
T  4290942 agttgcgtgaccactagtttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacactt-agttgcgtgaccacatttttcaacttct 4290844  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||| ||||||| |||||||||||| | | ||||||||| ||||||| | || || || |||||||||||||  ||||| || |||||||    
T  4290843 aaatagtggtcactcaactgaaaaaatgtggtcagataaaccatatatctagttaattaaatttgtttagagtggtacaaacaggtgtgcacattaaag 4290745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 101 - 250
Target Start/End: Complemental strand, 21589739 - 21589590
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||||||||||| |||||| ||||| ||||||| |||| ||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21589739 agttgcatgaccactatttttccagaacttatttgattaattaagtggaaaaatagtggtcacacgcattttagttgcatgaccacatttttcagcttct 21589640  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    |||||||| |||| ||||||| ||||| |||||||| |||| ||||||||    
T  21589639 aaatagtgatcacacaactgaaaaaatatggtcacatagacaatatattt 21589590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 108 - 279
Target Start/End: Original strand, 15958313 - 15958485
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaata----gtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaa 203  Q
    ||||||| ||||||||||||||||||||||||| ||| | |||||| |    ||| |||||| ||||| | |||||||||||||||||||||||||||||    
T  15958313 tgaccactattttttcagaatttatttggttaaataagtaaaaaaaaaaattgtgatcacgcacatttaa-ttgcgtgaccacatttttcagcttctaaa 15958411  T
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtaca 279  Q
    ||||| ||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  15958412 tagtg-tcatgcaactta-aaaatgtggtcacacagaccatatatttagttaactgaaattttacagagtggtaca 15958485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 5083792 - 5083982
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| ||||||  ||||||||||| |||||| || |  ||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||    
T  5083792 tgaccactatttttctagaatttatttcgttaacaaagttgaaaaatagtggtcacccgcattt-agttgcgtgaccatatttttcaacttctaaatagt 5083890  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||| ||| |||||||||||||| | |||||||||||  | || ||||||||| |||| |  |||||| ||||||| | |||||||    
T  5083891 ggtcacgcaattgaaaaaatgtggtcacacataccatatatttgatgaattgaaattttcgagaataatacaaaggggtgtatacattaaag 5083982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 103 - 266
Target Start/End: Original strand, 22740654 - 22740817
Alignment:
Q  103 ttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaa 202  Q
    |||| |||| || ||||||||||||||||||||||||||||| || ||||||| || ||||||  |||||||||||||||||| |||||||||||| |||    
T  22740654 ttgcgtgactactattttttcagaatttatttggttaactaagtggaaaaataatgatcacgcatattttagttgcgtgaccatatttttcagcttttaa 22740753  T
Q  203 atagtggtcacgcaactg-ataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    ||| ||||||| |||||| | |||||||||| ||| | || |||||||||||||| |||||||||    
T  22740754 ata-tggtcacacaactgaaaaaaatgtggttacacaaactatatatttagttaattgaaatttt 22740817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 28804990 - 28805094
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| || ||| || ||||||||||||||||||| || ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  28804990 tgaccactatatttccataatttatttggttaactaagtggaaaaatagtggtc-cgcgcattttggttgtgtgaccacatttttcagcttctaaatagt 28805088  T
Q  208 ggtcac 213  Q
    | ||||    
T  28805089 gatcac 28805094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 299
Target Start/End: Original strand, 32964848 - 32964947
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||||||||||||| | || ||||||||||| ||||||||||| ||||||||| |||||||| |||||| |||||||||||||| | |||||||    
T  32964848 taaatagtggtcacgcaactaaaaatatgtggtcacacagaccatatatatagttaacttaaattttttagagtgatacaaaagggtgtatacattaaag 32964947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 127 - 319
Target Start/End: Complemental strand, 32964852 - 32964651
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct----------aaatagtggtcacgca 216  Q
    ||||||| |||||| ||| || |||||||||||||||| ||||||||||| | |||||| ||||||||||||||          ||||||||||||| ||    
T  32964852 atttattaggttaattaagtggaaaaatagtggtcacgtgcattttagttacatgaccatatttttcagcttctaaatgctggaaaatagtggtcacaca 32964753  T
Q  217 actgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttta 316  Q
    | ||| ||||| |||||||| | ||||||||||||||||||| ||||| || ||||||||  ||| |  |||||| ||||| | || ||| |||||||||    
T  32964752 attga-aaaatatggtcacacataccatatatttagttaacttaaattctttagagtggtgtaaatgaatgtacacattaaggatgtctaccaatcttta 32964654  T
Q  317 ttc 319  Q
    |||    
T  32964653 ttc 32964651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 28804976 - 28804902
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||| ||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||||    
T  28804976 aaaatgtggtcacatagaccatatatttggttaactgaaattttctagaatggtacaaaagggtgtacatattaa 28804902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 319
Target Start/End: Original strand, 28805116 - 28805234
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    |||| ||| |||||||||||| |||||||||||||| | ||||||||||| ||||||| |||||||| |||||| |||||| |||| |||| ||||| |     
T  28805116 aaatcgtgatcacgcaactgaaaaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtgatacaaaggggtatacacattaaggg 28805215  T
Q  301 tgactatcaatctttattc 319  Q
    || ||| ||||||||||||    
T  28805216 tgtctaccaatctttattc 28805234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 21589721 - 21589817
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||| |||||| | |||||||||||||| ||||||||||||| | |||||||||||||| ||||||||| ||| || |||||| |||||    
T  21589721 aaatagtggtcatgcaactaaaaaaatgtggtcacacagaccatatatttggataactgaaattttttagagtggtataaacggatgtacacattaa 21589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 46943761 - 46943839
Alignment:
Q  127 atttatttggttaactaaatgaaaa--aatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  46943761 atttatttggttaactaagtgaaaaaaaatagtggtcacgcgcattttagttgcgtgatcaca-ttttcagcttctaaat 46943839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 31303553 - 31303661
Alignment:
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttg 302  Q
    ||||||||||||||||| | |||||||||||||| | ||||||||||| ||||||||||||||||  |||||||| |||||| |||| | ||||||| ||    
T  31303553 atagtggtcacgcaactaa-aaaatgtggtcacacataccatatattttgttaactgaaatttttttgagtggtataaaaggatgtagacattaaaggtg 31303651  T
Q  303 actatcaatc 312  Q
     ||| |||||    
T  31303652 tctaccaatc 31303661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 22033158 - 22033238
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||||||||| ||||||| |||||||| ||| |||||||||    
T  22033158 aaatagtggtcacgcaactcaaaaaatatggtcacacagaccatatatttggttaactaaaatttttcagaatggtacaaa 22033238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 21548550 - 21548629
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaa 280  Q
    ||||||||||||||||||| |  |||| || ||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  21548550 aaatagtggtcacgcaactaaacaaatatgatcacacagaccatatatttagttaactgaaattttttagaatggtacaa 21548629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 5083803 - 5083738
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||  |||||||||||||||    
T  5083803 aaatagtggtcacgtaactaa-aaaatgtggtcacaaagaccatatatttgattaactgaaattttt 5083738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 5174975 - 5174910
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcatttta 173  Q
    ||||||| | |||||||||||||||||| |||||||| || ||||||||||||||||| |||||||    
T  5174975 tgaccactaatttttcagaatttatttgattaactaagtgtaaaaatagtggtcacgcacatttta 5174910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 18312924 - 18313004
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||||||||||||| | ||||| | | |||| | ||||||||||| |||| ||||||||||| |||||||||||||    
T  18312924 aaatagtggtcacgcaactaaaaaaatttagccacacaaaccatatatttggttagctgaaatttttcagagtggtacaaa 18313004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 20556867 - 20556963
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||| ||||  | |||||||||||| | |||| |||||||||||||||||||| |||| | |||| |||||| | |||| ||||||||    
T  20556867 aaatagtggtcactcaaccaaaaaaatgtggtcaaacagactatatatttagttaactgaaaattttcaaagtgatacaaaggagtgtgcatattaa 20556963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 204
Target Start/End: Original strand, 27523496 - 27523583
Alignment:
Q  117 ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||| |||  ||||||  |||||||| ||||||||    
T  27523496 ttttttcagaatttatttggttaattaagtggaaaaatagtagtcaagcacattttaattgtatgaccatgtttttcagtttctaaat 27523583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 2887188 - 2887230
Alignment:
Q  169 ttttagttgcgtgaccacatttttcagcttctaaatagtggtc 211  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  2887188 ttttagttgcgtaaccacatttttcagcttctaaatagtggtc 2887230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 15958324 - 15958258
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    ||||||||||||| ||||| | ||||||||||||||  |||||||||||| ||||||| ||||||||    
T  15958324 aaatagtggtcacacaactaaaaaaatgtggtcacactgaccatatatttggttaacttaaattttt 15958258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 22033054 - 22032996
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||||| | ||||||||||| ||||||| |||||||  |||||||||||||    
T  22033054 aaaatgtggtcacacataccatatatttggttaacttaaattttaaagagtggtacaaa 22032996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 4290927 - 4291004
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||||||| | |||| ||||||| | ||| ||| ||||| |||||||||||||||| | ||| |||||||    
T  4290927 tagtggtcacgcaactaaaaaaacgtggtcatacagatcatttatttggttaactgaaatttttcaaagtagtacaaa 4291004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 22740150 - 22740076
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||| |||||||||||||  |||||| |||| ||| |||||| |||| |  |||||||| |||||    
T  22740150 aaaatgtggtcacacagaccatatatttgattaacttaaatatttcagagtgatacatagaggtgtacacattaa 22740076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 28804882 - 28804950
Alignment:
Q  2 gcaatgataggtaggcacccttaatgatatgtacattcatttgtactattctgaaaaatttcagttaaccaa 73  Q
    |||||||||||||| ||||||||||   |||||||  | ||||||| |||||  ||||||||||||||||||    
T  28804882 gcaatgataggtagacacccttaat---atgtacacccttttgtaccattctagaaaatttcagttaaccaa 28804950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 22033095 - 22033151
Alignment:
Q  148 aaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||| ||| ||||||||||| ||| ||  ||||||||| ||||||||    
T  22033095 aaaaaatagtggtcccgcacattttagttgtgtgcccgtatttttcagtttctaaat 22033151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 5e-60; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 101 - 318
Target Start/End: Complemental strand, 13312714 - 13312498
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| |||||| || ||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  13312714 agttgcgtgaccactatttttccataatttatttggttaactaagtggaaaaatagttgccacgcgcattttagttgcgtgaccacatttttcagcttct 13312615  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    |||||| |||||| ||||||| |||||||| ||||| ||||||||||||| ||||| ||||||||| || | | ||||||||||||||||| |||||||     
T  13312614 aaatagcggtcacccaactga-aaaatgtgttcacatagaccatatatttggttaattgaaattttcgaaaatagtacaaaagggtgtacacattaaagg 13312516  T
Q  301 tgactatcaatctttatt 318  Q
    |  ||| |||||||||||    
T  13312515 tatctaccaatctttatt 13312498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 101 - 231
Target Start/End: Complemental strand, 35922848 - 35922718
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35922848 agttgcatgaccactattttttcagaatttatttggttaactaaatggaaaaatagtggtcatacgcattttagttgcgtgaccacatttttcagcttct 35922749  T
Q  201 aaatagtggtcacgcaactgataaaatgtgg 231  Q
    ||||||||||||||||||||| |||||||||    
T  35922748 aaatagtggtcacgcaactgaaaaaatgtgg 35922718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 22169573 - 22169377
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||  ||||||||| ||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  22169573 agttgcgtgaccattattttttcaaaatttatttggttaactacgttgaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcaacttat 22169474  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||||| |||||||| ||||| |  ||||||||||||||||||||||||||  | | || ||||| |||||||||| |||||    
T  22169473 aaatagtggtcacgcaactgaaaaaatgtgatcacatattccatatatttagttaactgaaattttcaaaaatgatacaatagggtgtacacattaa 22169377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 38521984 - 38522115
Alignment:
Q  124 agaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgata 223  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||| |    
T  38521984 agaatttatttagttaactaagtgtaaaaatagtggtcacgcgcatttta-tcgcgtgaccacatttttcagcttctaaatagtggtcatgcaattgaaa 38522082  T
Q  224 aaatgtggtcacaaagaccatatatttagttaa 256  Q
    ||||||||||||| ||||||||||||| |||||    
T  38522083 aaatgtggtcacatagaccatatatttggttaa 38522115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 43461709 - 43461858
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 215  Q
    ||||||||||||||||||||||| ||||| || |||||||||||| ||| | |||||||||||||||||  |||||||| |||||||||||||||||| |    
T  43461709 attttttcagaatttatttggtttactaagtggaaaaatagtggttacgtgaattttagttgcgtgaccgtatttttcaacttctaaatagtggtcacac 43461808  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    |||||| ||||| ||||| ||||||||||||||||  ||||||||||||||    
T  43461809 aactgaaaaaatatggtc-caaagaccatatatttgattaactgaaatttt 43461858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 33958976 - 33959148
Alignment:
Q  104 tgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaa 203  Q
    ||||||||||| |||||| ||||||||||||||| |||||| || |||||||||||| || || |||||||||||||||||| ||||||||| |||||||    
T  33958976 tgcatgaccacaatttttccagaatttatttggtcaactaagtggaaaaatagtggttactcggattttagttgcgtgaccatatttttcagtttctaaa 33959075  T
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggta 277  Q
    ||||||||||||| |||| |||||||  ||||| |||  |||||||| |||||||||| |||| |||| |||||    
T  33959076 tagtggtcacgcagctgaaaaaatgtaatcacataga-tatatattttgttaactgaagttttcgagaatggta 33959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 116 - 291
Target Start/End: Original strand, 19621481 - 19621655
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct----aaatagtggtc 211  Q
    |||||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||     ||||    |||||||||||    
T  19621481 atttttccagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacgtttt-----ttctggaaaaatagtggtc 19621575  T
Q  212 acgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    |||||| ||  |||||||||||||| | ||||||||||| |||||||||||||||| ||| ||||||||| | |||||||    
T  19621576 acgcaaatggaaaaatgtggtcacacataccatatatttggttaactgaaatttttcagaatggtacaaaggagtgtaca 19621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 123 - 319
Target Start/End: Complemental strand, 31189671 - 31189474
Alignment:
Q  123 cagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactg-- 220  Q
    ||||||||||||| ||||| || || |||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||||  ||| |||| ||      
T  31189671 cagaatttatttgattaaccaagtggaaaa-tagtggtcacaaacattttagttgcgtgatcacatttttcagcttctaaatagtaatcatgcaattgga 31189573  T
Q  221 ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
      |||||||||||||| | || |||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||| || ||  ||||||||||||    
T  31189572 caaaaatgtggtcacacatactatatatttggttaactgaaattttcgagagtggtacaaaatgttgtacatattaaaggtgtctgccaatctttattc 31189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 42034872 - 42034739
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | |||| || ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42034872 agttgcgtgaccactagttttccaaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttct 42034773  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcaca 236  Q
     |||||  ||||||||||||| ||||||||||||||    
T  42034772 -aataggagtcacgcaactga-aaaatgtggtcaca 42034739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 36169394 - 36169543
Alignment:
Q  169 ttttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttg 268  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| | |||||||||||  | | ||||||||||||    
T  36169394 ttttagttgcgtgaccatatttttcagcttctaaatagtggtcacgcaactgaaagaatgtggtcacacataccatatatttgatcagctgaaatttttg 36169493  T
Q  269 agagtggtacaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    ||||||||  |||| | |||| | ||||||| || ||| ||||||||||||    
T  36169494 agagtggtgtaaaa-gatgtatacattaaagatgtctagcaatctttattc 36169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 43262708 - 43262889
Alignment:
Q  130 tatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacattt---ttcagcttct-----------aaatagtggtcacgc 215  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||   |||||||| |           ||||||| |||||      
T  43262708 tatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgtgaccacatttttcttcagcttttaaatgttggaaaaatagtagtcacat 43262807  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||| |  ||||||||||||| ||||||||||||| |||||||||||||||| | ||| ||||||| ||||||||| |||||    
T  43262808 aactaaacaaatgtggtcacacagaccatatatttggttaactgaaatttttcaaagtagtacaaaggggtgtacacattaa 43262889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 15221662 - 15221760
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||| ||| | | |||||||||||||| |||||||||||||||||||||||||||||| ||| || |||||| | ||||||| |||||||    
T  15221662 aaatagtggtcacacaattaaaaaaatgtggtcacacagaccatatatttagttaactgaaatttttcagaatgatacaaaggagtgtacacattaaag 15221760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 13312696 - 13312778
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaag 283  Q
    ||||||||||||||||||| | |||||||||||||| | | ||||||| | |||||||||||||||| |||||||||||||||    
T  13312696 aaatagtggtcacgcaactaaaaaaatgtggtcacacaaatcatatatatggttaactgaaatttttcagagtggtacaaaag 13312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 30704398 - 30704476
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccaca-tttttcagcttctaaat 204  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||    
T  30704398 atttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgcgaccacattttttcagcttttaaat 30704476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 299
Target Start/End: Complemental strand, 7156182 - 7155998
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct------------aaatagtggtcacg 214  Q
    |||||||||||||| ||| || ||||||| |||||||||  |||||||||||| || |||||||||||||||||            ||||||||||||      
T  7156182 atttatttggttaattaagtggaaaaataatggtcacgcatattttagttgcgcgatcacatttttcagcttctaaattctgaaaaaaatagtggtcata 7156083  T
Q  215 caactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
     |||||| |||||||| ||| | | |||||||||||  ||||||||||||||  | |||||||||||| | |||||| |||||||    
T  7156082 taactgaaaaaatgtgatcatataaaccatatatttgattaactgaaattttctaaagtggtacaaaaagatgtacacattaaag 7155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 30045940 - 30045885
Alignment:
Q  125 gaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgt 180  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||    
T  30045940 gaatttatttggttaattaaatggaaaaatagtggtcacgcgtattttagttgcgt 30045885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 293
Target Start/End: Complemental strand, 30704402 - 30704309
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacata 293  Q
    ||||||||| |||||||||| |  ||| || |||||  |||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||    
T  30704402 taaatagtgatcacgcaactaaataaacgtagtcacggagaccatatatttgattaactgaaattttacagagtggtacaaaaaggtgtacata 30704309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 22169555 - 22169650
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||| ||||||||||||| | |||||||||||||| | | |||| |||| ||||||| ||| |||| |||||||||| |||||||||||| |||||    
T  22169555 aaataatggtcacgcaactaaaaaaatgtggtcacacatatcataaatttggttaactaaaaattttcagagtggtac-aaagggtgtacagattaa 22169650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 42034857 - 42034952
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||||||||| | |||||||| | ||| | |||||||||||  | ||||||||||||| ||||||||||||| || |||||  |||||||    
T  42034857 tagtggtcacgcaactaaaaaaatgtgattacacataccatatatttgatcaactgaaattttttagagtggtacaaagggatgtacgcattaaag 42034952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 35922702 - 35922628
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||| | |||||||||||  ||||||||||||||| |||||| |||||| || |||||| |||||    
T  35922702 aaaatgtggtcacacataccatatatttgattaactgaaatttttcagagtgatacaaagggatgtacacattaa 35922628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 2477370 - 2477302
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcat 169  Q
    |||||| || |||| |||||| |||||||||||||||||||||| |  ||||||||||| |||||||||    
T  2477370 agttgcgtggccactatttttacagaatttatttggttaactaagtcgaaaaatagtggccacgcgcat 2477302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 33958991 - 33958911
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||| ||||||| ||| || | |||||||| | ||| ||||||||||||| ||||| |||||||||| |||||||||||||    
T  33958991 aaattgtggtcatgcagctaaaaaaatgtgattacatagaccatatatttggttaagtgaaatttttcagagtggtacaaa 33958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 35922830 - 35922926
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||| |||||| | ||||| ||||| || |||||||| |||| ||||||| |||||||| | |||| ||||||  |||||||| |||||    
T  35922830 aaatagtggtcatgcaacttaaaaaatatggtcccacagaccataaatttggttaacttaaatttttcaaagtgatacaaagcggtgtacacattaa 35922926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 31189710 - 31189761
Alignment:
Q  240 accatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    ||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  31189710 accatatatttggttaactgaaattttttaaagtggtacaaaggggtgtaca 31189761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 36169410 - 36169337
Alignment:
Q  207 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||||||| | ||||||||||||||   ||||||||||| ||||||| |||||||| | |||||||||||    
T  36169410 tggtcacgcaactaa-aaaatgtggtcacacctaccatatatttggttaactaaaatttttcaaagtggtacaaa 36169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 15221673 - 15221618
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcac 163  Q
    ||||||| ||||||||||||||||||| ||||| ||| || ||||| |||||||||    
T  15221673 tgaccactattttttcagaatttatttagttaattaagtggaaaaagagtggtcac 15221618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 19621655 - 19621613
Alignment:
Q  31 tgtacattcatttgtactattctgaaaaatttcagttaaccaa 73  Q
    |||||| || ||||||| |||||||||||||||||||||||||    
T  19621655 tgtacactcctttgtaccattctgaaaaatttcagttaaccaa 19621613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 15221625 - 15221572
Alignment:
Q  228 gtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||| | ||||||||||| ||||||| ||||||| |||| |||||||||    
T  15221625 gtggtcacacaaaccatatatttggttaactaaaattttcgagaatggtacaaa 15221572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 7156178 - 7156226
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatat 248  Q
    |||||||||||||| ||||| | ||||||||||||||  ||||||||||    
T  7156178 taaatagtggtcacacaactaaaaaaatgtggtcacacggaccatatat 7156226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 202 - 382
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | ||||||| || |||||||| ||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  202 agttgcgtgaccactaatttttcaaaaattatttggataagtaagtggaaaaatagtggtcatgcgcattttagttgcgtgaccacatttttcagcttct 301  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||||||||||||||||||| ||| ||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||    
T  302 aaatagtggtcacgcaactgaaaaagtgtggccacacagaccatatatttggttaactgaaaattttcagagtggtacaaa 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 217 - 121
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt-gagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||||||||| | | |||||| ||||| || |||||||||| ||||||||||||||||  ||||||||||||||   |||||| |||||||    
T  217 tagtggtcacgcaactaaaacaatgtgatcacacagtccatatatttggttaactgaaatttttcaagagtggtacaaaaaaatgtacacattaaag 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 8e-53; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 29677078 - 29677263
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29677078 agttgcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacatttttcagcttct 29677177  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||| ||||||| |||       |||    |||||||||||  |||||| ||||||||||||||||||||||  |||||||| |||||    
T  29677178 aaatagtggtcactcaactgaaaaa-------cac----accatatatttgtttaacttaaatttttgagagtggtacaaagaggtgtacacattaa 29677263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 116 - 322
Target Start/End: Complemental strand, 34364332 - 34364128
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 215  Q
    |||||| |||||||| ||||||||||||| ||||||||| |||||||||  ||||||||||| |||||||||| |||||||||||||||| ||| |||||    
T  34364332 atttttccagaatttttttggttaactaagtgaaaaaattgtggtcacgttcattttagttgtgtgaccacatgtttcagcttctaaata-tggccacgc 34364234  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagttgactatcaatcttt 315  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| |||||||  |||||||||||||  | ||| |||||||| | || | | | ||||||    
T  34364233 aactga-aaaatatggtcacacagaccatatatttagttaacttaaattttccagagtggtacaaatagatgtgcatattaatggtgtcaacctatcttt 34364135  T
Q  316 attcaaa 322  Q
    |||||||    
T  34364134 attcaaa 34364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 101 - 266
Target Start/End: Complemental strand, 34490304 - 34490140
Alignment:
Q  101 agttgcatgaccacca-ttttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttc 199  Q
    |||||| ||||||| | |||||||||||||||||||||||||||| |  |||||||||||||| |||||||||| |||| ||||||||||||| ||||||    
T  34490304 agttgcgtgaccactagttttttcagaatttatttggttaactaactagaaaaatagtggtcatgcgcatttta-ttgcatgaccacattttttagcttc 34490206  T
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttt 266  Q
    |||||||||||||  ||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  34490205 taaatagtggtcatacaactgaaaaaatgt-gtcacacagaccatatatttagttaactgaaatttt 34490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 25238575 - 25238436
Alignment:
Q  118 tttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 217  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||| ||||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  25238575 tttttcagaatttatttggttaactaagtggaaaaatagtggttacgcacatttta-ttacgtgaccacattttttagcttctaaatagtggtcacgcaa 25238477  T
Q  218 ctgataaaatgtggtcacaaagaccatatatttagttaact 258  Q
    |||| ||||| || ||| | |||||||||||||||||||||    
T  25238476 ctgaaaaaatttgatcatatagaccatatatttagttaact 25238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 101 - 320
Target Start/End: Complemental strand, 5831648 - 5831430
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | |||| |||||||||||||||||||||| || |||||| ||||| |  |||||||||||| || ||||| |||||| | |||||    
T  5831648 agttgcgtgaccactaattttccagaatttatttggttaactaagtggaaaaattgtggtaatacgcattttagttacgggaccatattttttaacttct 5831549  T
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    |||||||||||| |||||  | ||||| || ||||| | ||||||| ||||||||||| |||||||| ||| || |||||||||||||||  |||||||     
T  5831548 aaatagtggtcatgcaacaaacaaaatatgatcacacataccatatctttagttaactaaaatttttcagaatgttacaaaagggtgtactcattaaag- 5831450  T
Q  301 tgactatcaatctttattca 320  Q
    || ||| |||||||||||||    
T  5831449 tgtctaccaatctttattca 5831430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 29167803 - 29167931
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct 200  Q
    |||||| ||||||| | |||||| |||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||| |||||||    
T  29167803 agttgcctgaccactagtttttcggaatttatttggttaactaagtggaaaaatagtggtcatgcgcatttta-ttgcgtgaccatattttttagcttct 29167901  T
Q  201 aaatagtggtcacgcaactgataaaatgtg 230  Q
    ||||||||||||||||||||| ||||||||    
T  29167902 aaatagtggtcacgcaactgaaaaaatgtg 29167931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 38952023 - 38951840
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccaca--tttttcagctt 198  Q
    |||||| ||||||| |||| | || ||||||||||||||||||| |  ||||||||||||||  ||||||||||||||||||| | |  |||||||| ||    
T  38952023 agttgcttgaccactatttctccaaaatttatttggttaactaagtagaaaaatagtggtcagacgcattttagttgcgtgactatatttttttcagttt 38951924  T
Q  199 ctaaatagtggtcacgcaactg-ataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||||||||| ||| | ||||||||||  || ||||||||||||| ||||||| ||||||| ||||||||||||||    
T  38951923 ctaaatagtggtcacgcagctgaaaaaaatgtggtttcatagaccatatatttggttaacttaaattttcgagagtggtacaaa 38951840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 42604319 - 42604199
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 215  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||  |||||| | |||| ||||||||||||||||| | ||    
T  42604319 attttttcagaatttatttcgttaactaagtggaaaaatagtggtcacgcgcattttagttgtatgaccatacttttaagcttctaaatagtggtgatgc 42604220  T
Q  216 aactgataaaatgtggtcaca 236  Q
    |||||| ||||||||||||||    
T  42604219 aactgaaaaaatgtggtcaca 42604199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 517421 - 517585
Alignment:
Q  117 ttttttcagaattt-atttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 215  Q
    |||||||||||||| |||||||||||||| | |||||||||| |||| |  |||||||||||||||| || |||||| | ||||||||||||||| ||||    
T  517421 ttttttcagaattttatttggttaactaagttaaaaaatagtagtcatgttcattttagttgcgtgatcatattttttaacttctaaatagtggttacgc 517520  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    || ||| ||||||||||  || | | ||||||||| ||||||| ||||||||||||||| ||||||    
T  517521 aattga-aaaatgtggttgcacatatcatatatttggttaacttaaatttttgagagtgatacaaa 517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 5855201 - 5855297
Alignment:
Q  200 taaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatatta 296  Q
    |||||||||||||||||||| |  ||||||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  5855201 taaatagtggtcacgcaactaactaaatgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaaagagtgtacatatta 5855297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 34490289 - 34490382
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||  |||||||| |||||    
T  34490289 tagtggtcacgcaactaaaaaaatgtggtcacacagaccatatattttgtaaactgaaatttttcagagtggtacaaagtggtgtacacattaa 34490382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 9929834 - 9929951
Alignment:
Q  164 gcgcattttagttgcgtgaccacat-ttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaa 262  Q
    ||||||||||||||||||||||||| ||||| |     ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||    
T  9929834 gcgcattttagttgcgtgaccacatattttctgaaa--aaatagtggtcacgcaaatgaaaaaatgtggtcacacagaccatatatttagttaattgaaa 9929931  T
Q  263 tttttgagagtggtacaaaa 282  Q
    ||||| | | ||||||||||    
T  9929932 tttttcaaaatggtacaaaa 9929951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 2996101 - 2996025
Alignment:
Q  128 tttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||||||  | |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  2996101 tttatttggttaactaagcggaaaaatagcggccacgcgcattttatttgcgtgaccacatttttcagcttctaaat 2996025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 9468199 - 9468064
Alignment:
Q  127 atttatttggttaactaaatga-aaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaa 225  Q
    |||||||||||||||||| ||  ||||||||| |||||   ||||||||||| |||| |||||||| |||||| |||||| ||||||  ||||||| |||    
T  9468199 atttatttggttaactaagtggcaaaaatagtagtcacatacattttagttgtgtgatcacattttacagcttttaaata-tggtcagacaactgaaaaa 9468101  T
Q  226 atgtggtcacaaagaccatatatttagttaactgaaa 262  Q
    || |||||||| | ||||||||||| |||||||||||    
T  9468100 atatggtcacacataccatatatttggttaactgaaa 9468064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 13350999 - 13350903
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||| | || |||||||| |||| ||| ||||| | ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  13350999 aaatagtagccatgcaactgaaaaaacgtgatcacacataccatatatttggttaactgaaattttcgagagtggtacaaaagggtgtacacattaa 13350903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 5831633 - 5831720
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    |||||||||||||||| | ||||| |||||||| ||||||||||||| ||||| |||||||||| |||||| |||||| |||||||||    
T  5831633 tagtggtcacgcaactaaaaaaatatggtcacacagaccatatatttggttaattgaaatttttcagagtgatacaaaggggtgtaca 5831720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 13351008 - 13351081
Alignment:
Q  226 atgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    ||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||| ||||||||| |||||||    
T  13351008 atgtggtcacaaagaccatatatttggttaagttaaatttttcagagtggtacaaaggggtgtacacattaaag 13351081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 38244801 - 38244863
Alignment:
Q  203 atagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattt 265  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| | ||||| ||||||    
T  38244801 atagtggtcacgcaactgaaaaaatgtggtcacacagaccatatatttggctaacttaaattt 38244863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 2570024 - 2569960
Alignment:
Q  101 agttgcatgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgc 165  Q
    |||||| ||||||| ||||||  ||||||||||||||||||||| || |||||||||||||||||    
T  2570024 agttgcgtgaccactatttttctagaatttatttggttaactaagtggaaaaatagtggtcacgc 2569960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 38952005 - 38952085
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||||||||||| |||||| | ||||| |||||||| | |||||| |||| |||||||||||||||| |||||| ||||||    
T  38952005 aaatagtggtcaagcaactaaaaaaatatggtcacatataccatacattttgttaactgaaatttttcagagtgatacaaa 38952085  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 29167818 - 29167756
Alignment:
Q  204 tagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    ||||||||| |||||| | |||||||||||||| | ||||||||||||||||||||||||||||    
T  29167818 tagtggtcaggcaactaa-aaaatgtggtcacacaaaccatatatttagttaactgaaattttt 29167756  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 5855205 - 5855056
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttct-----------aaatagtggtcacgc 215  Q
    |||||||||||||| |||||| ||||||||  ||||  || |||||||||| |||||||||| ||| ||||| |           |||| |||||||| |    
T  5855205 atttatttggttaattaaatggaaaaatagacgtca--cgtattttagttgtgtgaccacatattttagcttttaaatgttggaaaaattgtggtcacac 5855108  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    |||||| || ||||||||||| ||||||||||||| |||| |||||||||||    
T  5855107 aactgaaaatatgtggtcacacagaccatatatttggttagctgaaattttt 5855056  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 29677096 - 29676999
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaag 299  Q
    |||||||||||| |||||| | |||||||||||||| || |||||||||| ||||||| |||||||| | |||| |||||| ||  ||||| |||||||    
T  29677096 aaatagtggtcatgcaactaa-aaaatgtggtcacacaggccatatatttggttaactaaaatttttcaaagtgctacaaagggacgtacacattaaag 29676999  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 25238596 - 25238653
Alignment:
Q  223 aaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaa 280  Q
    |||||||||||||| | |||||||||||  ||||||||||||||| ||||||||||||    
T  25238596 aaaatgtggtcacagaaaccatatatttgattaactgaaatttttcagagtggtacaa 25238653  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 2570006 - 2570101
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||||| | ||||| |||| ||| | |||||||| || ||||||| |||||||  |||| ||||| |||||||||||| |||||    
T  2570006 aaatagtggtcacgcaactcaaaaaatatggtaacacaaaccatatacttggttaacttaaattttccagagcggtac-aaagggtgtacacattaa 2570101  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 2569974 - 2569876
Alignment:
Q  201 aaatagtggtcacgcaactgataaaa--tgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||||||| ||| ||||  ||| |||||| ||||||||||||| |||||| |||| |||| ||| | |||||||   |||||||||||||    
T  2569974 aaatagtggtcacgcaattgaaaaaaaatgtagtcacacagaccatatatttggttaaccgaaaatttttagaatagtacaaagaagtgtacatattaa 2569876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 24708123 - 24708074
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    |||||||||||||||| || | |||||||||||||| |||||||||||||    
T  24708123 aaatagtggtcacgcaccttaaaaaatgtggtcacacagaccatatattt 24708074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 28499662 - 28499723
Alignment:
Q  239 gaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaagt 300  Q
    |||||||||||| |||||||||||||||| ||| |||||||||| | ||||||  |||||||    
T  28499662 gaccatatatttggttaactgaaattttttagaatggtacaaaatgatgtacacgttaaagt 28499723  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 38245012 - 38245069
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaact 258  Q
    |||||||||||||||| |||| ||||| |||| ||| ||||||||||||||| |||||    
T  38245012 aaatagtggtcacgcagctgaaaaaatctggttacatagaccatatatttagctaact 38245069  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 17227548 - 17227500
Alignment:
Q  202 aatagtggtcacgcaactgataaaatgtggtcacaaagaccatatattt 250  Q
    ||||||||||||||| || | |||||||||||||| |||||||||||||    
T  17227548 aatagtggtcacgcaccttaaaaaatgtggtcacacagaccatatattt 17227500  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 9929739 - 9929778
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaata 155  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  9929739 attttttcaaaatttatttggttaactaaatggaaaaata 9929778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 9929735 - 9929662
Alignment:
Q  208 ggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    |||| ||||||| | | |||||||||| | | ||||||||||| ||||||| |||||||  |||||||||||||    
T  9929735 ggtcgcgcaactaaaataatgtggtcatacaaaccatatatttggttaacttaaattttcaagagtggtacaaa 9929662  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 2996003 - 2995928
Alignment:
Q  215 caactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtaca 291  Q
    ||||||| |||||||||||||| | |||||||||||  |||| | || ||||| | |||||||||||||| ||||||    
T  2996003 caactgaaaaaatgtggtcacaca-accatatatttgattaattaaattttttcaaagtggtacaaaaggatgtaca 2995928  T

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Target: scaffold0251 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 116 - 297
Target Start/End: Original strand, 10623 - 10804
Alignment:
Q  116 attttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgc 215  Q
    ||||||| ||||||||||||||||||||| || ||||||| |||||||| | ||||||||||||||||||||||||| |  || ||||||||||||| ||    
T  10623 attttttgagaatttatttggttaactaagtggaaaaataatggtcacgggtattttagttgcgtgaccacattttttattttttaaatagtggtcatgc 10722  T
Q  216 aactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    |||| | ||||| | |||||  ||||||||||||| ||||| |||||||||  ||||||||||||| |  ||||||||||||    
T  10723 aacttaaaaaatatagtcacctagaccatatatttggttaattgaaattttctagagtggtacaaaggaatgtacatattaa 10804  T

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Target: scaffold0123 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 108 - 281
Target Start/End: Original strand, 24021 - 24195
Alignment:
Q  108 tgaccaccattttttcagaatttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 207  Q
    ||||||| | |||||||||||||||||||| || ||| || |||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  24021 tgaccactagtttttcagaatttatttggtaaaataagtggaaaaatagtggtcacgcgcatttta-atgcgtaaccacattttttagcttctaaatagt 24119  T
Q  208 ggtcacgcaactgataaaatgtggtcacaaagac--catatatttagttaactgaaatttttgagagtggtacaaa 281  Q
    ||||| |||||||| ||||||| |||||| ||||  ||||||||  ||| |||||||||||| ||| || ||||||    
T  24120 ggtcatgcaactgaaaaaatgtagtcacatagacgacatatattcggttcactgaaatttttcagattgatacaaa 24195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 177 - 319
Target Start/End: Original strand, 21549 - 21689
Alignment:
Q  177 gcgtgaccacatttttcagcttctaaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggt 276  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||  ||||||||| |||||  | |||||     
T  21549 gcgtgaccacatttttcagcttctatatagtggtcacgcaactgaaaaaatgtggtcacacagaccatatattcggttaactgagattttctaaagtggc 21648  T
Q  277 acaaaagggtgtacatattaaagttgactatcaatctttattc 319  Q
    |||||   ||||||| ||||||| || ||| ||||||||||||    
T  21649 acaaa--cgtgtacacattaaaggtgtctaccaatctttattc 21689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 21529 - 21432
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaaa 298  Q
    ||||| ||||||||||||| | || || || | ||| ||||| ||||||| |||||||||||||||| | | ||||| ||| || |||||| ||||||    
T  21529 aaataatggtcacgcaacttaaaatatatgcttacacagaccgtatatttggttaactgaaattttttaaaatggtataaatggatgtacacattaaa 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 87112 - 87035
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||||||| |  |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  87112 atttatttggttaactaagtagaaaaatagtggtcacgtgtattttagttgcgtgaccacatttttcagtttctaaat 87035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 86991 - 86895
Alignment:
Q  201 aaatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaatttttgagagtggtacaaaagggtgtacatattaa 297  Q
    ||||||||||||| |||| || |||||||||||||| | || ||||||||  |||| |||| ||||  ||| ||||| ||| ||||||||| |||||    
T  86991 aaatagtggtcacacaaccgaaaaaatgtggtcacacaaactatatatttgattaattgaagttttctagaatggtagaaaggggtgtacacattaa 86895  T

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Target: scaffold0024 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 112235 - 112158
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||| ||||||||| || |||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  112235 atttatttagttaactaagtggaaaaatagtggtcacgtgcattttaattgcgtgaccacgtttttcagcttctaaat 112158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 5947 - 5870
Alignment:
Q  127 atttatttggttaactaaatgaaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaat 204  Q
    |||||||||||||| ||| || |||||||||||||||||| ||||||||||||  |||||| |||||||||| |||||    
T  5947 atttatttggttaattaagtgcaaaaatagtggtcacgcgtattttagttgcgacaccacacttttcagcttttaaat 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 24738 - 24798
Alignment:
Q  207 tggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattttt 267  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| | |||||||| |||||    
T  24738 tggtcacgcaacttataaaatgtggtcacatagaccatatatttggctaactgaatttttt 24798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 24932 - 24995
Alignment:
Q  202 aatagtggtcacgcaactgataaaatgtggtcacaaagaccatatatttagttaactgaaattt 265  Q
    |||||||||||| ||||||| || ||||||||||| |||| |||||||| | ||||||||||||    
T  24932 aatagtggtcacacaactgaaaacatgtggtcacacagactatatatttggctaactgaaattt 24995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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