View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15264_low_7 (Length: 379)
Name: NF15264_low_7
Description: NF15264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15264_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 49 - 348
Target Start/End: Complemental strand, 30862542 - 30862244
Alignment:
| Q |
49 |
ggaaaaatagtgttttgtatgtggttaaaaagttgtcacataaatgggaatgaaaggtcccattggaaagagtaaaagggttacatattcagcaaaaatg |
148 |
Q |
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| T |
30862542 |
ggaaaaatagtgttttgtatgtggttaaatagttgtcacataaatgggaatgaaaggtcccattggaaagagtaaaagggttacatattcagcaaaaatg |
30862443 |
T |
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| Q |
149 |
gccaaggctatagcttcacagggaatatatgtggaatttagtttgatccttgaagccttttcagttcaagacagttgag-ttttagacttaaatatttta |
247 |
Q |
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| T |
30862442 |
gcc-aggctatagcttcacagggaatatatgtggaatttagtttgatccttgaagccttttcagttcaagacagttgagtttttagacttaaata-ttta |
30862345 |
T |
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| Q |
248 |
ttaatatttagtaatgctgtgatttagaattaatgggtgaaatatgtaaattttagacttaaatatttactaatatttagttctatataatcatatctgt |
347 |
Q |
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| T |
30862344 |
ctaatatttagttatgctgtgatttagaattaatgggtgaaatatgtaaattttagagttaaatatttactaatatttagttctatataattatatctgt |
30862245 |
T |
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