View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15266_high_4 (Length: 250)
Name: NF15266_high_4
Description: NF15266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15266_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 39122514 - 39122740
Alignment:
| Q |
1 |
ttttctcaatttccatgattaaatattctatactacaatattgtcctccctgaaagaatgtgtcatatatcgaattcaatggtatacttttagtctattg |
100 |
Q |
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| T |
39122514 |
ttttctcaatttccatgattaaatattctacactgcaatattgtcctccctgaaagaatgtgtcatatatcgaattcaatggtatacttttagtctattg |
39122613 |
T |
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| Q |
101 |
aaaaaacatgtttgatatnnnnnnnncgtgcttggtattttaacaaataatttaaaattttcaagttaaacttagctcattaatttgtgcattacttgtt |
200 |
Q |
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| T |
39122614 |
aaaaaacatgtttgatat-aaaaaaacgtgcttggtattttaacaaataatttaaaattttcaagttaaacttagctcattaa------------ttgtt |
39122700 |
T |
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| Q |
201 |
tttcttttgtttcctttcttacattatataaggacctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
39122701 |
tttcttttgtttcctttcttacattatataaggacctttg |
39122740 |
T |
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