View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15266_low_4 (Length: 312)

Name: NF15266_low_4
Description: NF15266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15266_low_4
NF15266_low_4
[»] chr1 (41 HSPs)
chr1 (16-312)||(28030827-28031126)
chr1 (23-130)||(6766374-6766481)
chr1 (23-130)||(16120593-16120700)
chr1 (23-130)||(36757639-36757746)
chr1 (10-121)||(38153417-38153528)
chr1 (23-130)||(6402563-6402670)
chr1 (23-130)||(11641220-11641327)
chr1 (23-130)||(17305956-17306063)
chr1 (23-130)||(30003535-30003642)
chr1 (23-130)||(42735318-42735428)
chr1 (23-130)||(52024028-52024135)
chr1 (23-132)||(27292640-27292749)
chr1 (25-130)||(44644510-44644615)
chr1 (23-122)||(48526837-48526936)
chr1 (23-130)||(9342798-9342905)
chr1 (23-130)||(36399100-36399207)
chr1 (23-130)||(40771925-40772032)
chr1 (23-130)||(44647866-44647973)
chr1 (16-130)||(24321261-24321377)
chr1 (23-130)||(30701720-30701827)
chr1 (23-125)||(4302125-4302227)
chr1 (23-125)||(40977641-40977743)
chr1 (25-117)||(26910091-26910183)
chr1 (23-130)||(42788695-42788802)
chr1 (23-122)||(19711845-19711940)
chr1 (23-130)||(30385298-30385405)
chr1 (24-125)||(25695404-25695508)
chr1 (23-122)||(3485360-3485459)
chr1 (23-130)||(31444925-31445032)
chr1 (23-121)||(40800540-40800638)
chr1 (23-125)||(15382579-15382681)
chr1 (23-125)||(34634914-34635016)
chr1 (29-74)||(7568645-7568690)
chr1 (23-116)||(48375018-48375111)
chr1 (30-124)||(50972794-50972892)
chr1 (55-119)||(15912521-15912585)
chr1 (23-130)||(27984558-27984664)
chr1 (34-96)||(52163615-52163677)
chr1 (10-87)||(9881321-9881398)
chr1 (39-116)||(16689840-16689917)
chr1 (23-59)||(22575740-22575776)
[»] chr4 (51 HSPs)
chr4 (10-130)||(36523108-36523228)
chr4 (23-130)||(43967725-43967832)
chr4 (23-130)||(44232230-44232337)
chr4 (26-121)||(25101731-25101826)
chr4 (23-130)||(38416803-38416910)
chr4 (17-121)||(2571029-2571133)
chr4 (23-126)||(5428584-5428685)
chr4 (23-130)||(39307698-39307805)
chr4 (23-130)||(2760880-2760987)
chr4 (23-130)||(26169988-26170095)
chr4 (23-130)||(29830345-29830452)
chr4 (23-130)||(35381047-35381154)
chr4 (23-130)||(54330843-54330950)
chr4 (23-130)||(55209727-55209834)
chr4 (23-125)||(25296733-25296835)
chr4 (23-123)||(12625260-12625360)
chr4 (25-125)||(55800841-55800941)
chr4 (23-122)||(3036990-3037089)
chr4 (23-130)||(7614617-7614724)
chr4 (34-125)||(34652211-34652302)
chr4 (23-130)||(38721339-38721446)
chr4 (24-130)||(27407773-27407879)
chr4 (16-130)||(37767104-37767218)
chr4 (34-127)||(29051689-29051782)
chr4 (23-95)||(4467672-4467744)
chr4 (25-125)||(55191831-55191931)
chr4 (23-122)||(12240331-12240430)
chr4 (23-122)||(35686383-35686482)
chr4 (23-122)||(38716897-38716995)
chr4 (23-130)||(47386439-47386546)
chr4 (23-129)||(25918206-25918312)
chr4 (16-122)||(31010224-31010330)
chr4 (28-130)||(50205745-50205847)
chr4 (23-123)||(30446307-30446406)
chr4 (23-130)||(17610282-17610389)
chr4 (23-130)||(26125710-26125817)
chr4 (23-102)||(45291862-45291941)
chr4 (23-122)||(19433511-19433614)
chr4 (43-121)||(27755730-27755808)
chr4 (26-127)||(20875403-20875504)
chr4 (31-130)||(23360180-23360276)
chr4 (16-130)||(9029595-9029712)
chr4 (26-116)||(56297858-56297948)
chr4 (16-125)||(30191619-30191723)
chr4 (68-125)||(34323076-34323133)
chr4 (26-117)||(34316536-34316626)
chr4 (23-103)||(19595734-19595814)
chr4 (23-122)||(10550434-10550535)
chr4 (24-74)||(19903804-19903854)
chr4 (23-125)||(50620835-50620937)
chr4 (30-123)||(40682627-40682720)
[»] chr7 (49 HSPs)
chr7 (10-130)||(36341622-36341742)
chr7 (23-130)||(28061668-28061775)
chr7 (23-130)||(36623310-36623417)
chr7 (23-130)||(47156029-47156136)
chr7 (16-130)||(38851993-38852107)
chr7 (23-130)||(41897990-41898097)
chr7 (23-130)||(42890496-42890603)
chr7 (23-127)||(30342079-30342183)
chr7 (27-130)||(8683820-8683923)
chr7 (23-130)||(32431511-32431618)
chr7 (23-125)||(40256064-40256166)
chr7 (26-127)||(27045564-27045665)
chr7 (23-130)||(6766703-6766810)
chr7 (23-122)||(7438913-7439012)
chr7 (23-130)||(7457875-7457981)
chr7 (23-130)||(39130079-39130186)
chr7 (23-130)||(40090071-40090178)
chr7 (34-125)||(42662194-42662284)
chr7 (23-130)||(48602438-48602545)
chr7 (23-117)||(44732027-44732121)
chr7 (49-130)||(46322144-46322225)
chr7 (23-122)||(11502733-11502832)
chr7 (23-130)||(16778507-16778614)
chr7 (23-130)||(20885105-20885212)
chr7 (23-130)||(35117128-35117234)
chr7 (34-128)||(7169130-7169224)
chr7 (23-127)||(4131656-4131760)
chr7 (23-123)||(46479838-46479938)
chr7 (23-125)||(36585116-36585218)
chr7 (34-130)||(2952424-2952521)
chr7 (24-125)||(25566702-25566802)
chr7 (23-130)||(46103523-46103623)
chr7 (23-127)||(5529016-5529120)
chr7 (23-125)||(34750507-34750611)
chr7 (23-130)||(42877388-42877495)
chr7 (23-129)||(6174839-6174945)
chr7 (23-121)||(26161607-26161705)
chr7 (16-127)||(3851082-3851190)
chr7 (26-130)||(47525992-47526097)
chr7 (52-130)||(45331917-45331992)
chr7 (30-130)||(49110630-49110730)
chr7 (31-118)||(16870641-16870728)
chr7 (23-125)||(35570202-35570309)
chr7 (23-130)||(41134641-41134743)
chr7 (29-74)||(3785578-3785623)
chr7 (54-123)||(26980056-26980125)
chr7 (23-64)||(39278484-39278525)
chr7 (26-74)||(37467463-37467511)
chr7 (32-76)||(38767221-38767265)
[»] chr3 (40 HSPs)
chr3 (10-123)||(44561793-44561906)
chr3 (23-130)||(27334884-27334991)
chr3 (23-130)||(13499488-13499595)
chr3 (23-130)||(42490349-42490456)
chr3 (23-130)||(20765198-20765305)
chr3 (23-130)||(21005295-21005402)
chr3 (23-130)||(27010627-27010734)
chr3 (23-122)||(33415809-33415908)
chr3 (23-130)||(39866294-39866401)
chr3 (23-130)||(42761636-42761743)
chr3 (49-130)||(45613575-45613656)
chr3 (38-130)||(19823902-19823994)
chr3 (29-125)||(34912301-34912397)
chr3 (23-117)||(3430427-3430521)
chr3 (23-125)||(21797563-21797665)
chr3 (23-121)||(33803532-33803631)
chr3 (23-82)||(44856396-44856455)
chr3 (26-130)||(41252919-41253023)
chr3 (23-130)||(43181508-43181616)
chr3 (23-122)||(15332959-15333058)
chr3 (23-125)||(25527413-25527513)
chr3 (16-130)||(15568081-15568194)
chr3 (19-125)||(41751559-41751665)
chr3 (55-125)||(42049788-42049858)
chr3 (23-125)||(54507648-54507750)
chr3 (62-130)||(32220865-32220933)
chr3 (16-91)||(17643772-17643847)
chr3 (51-125)||(43467923-43467997)
chr3 (17-130)||(15664092-15664204)
chr3 (41-125)||(22782273-22782357)
chr3 (41-125)||(22786637-22786721)
chr3 (23-91)||(30213845-30213913)
chr3 (39-130)||(37766049-37766145)
chr3 (23-130)||(36227547-36227654)
chr3 (27-93)||(27813445-27813511)
chr3 (23-124)||(6910342-6910443)
chr3 (26-121)||(30057310-30057405)
chr3 (86-127)||(27813817-27813858)
chr3 (16-76)||(33128065-33128125)
chr3 (39-127)||(42469635-42469722)
[»] chr2 (33 HSPs)
chr2 (23-123)||(7799856-7799956)
chr2 (23-130)||(7608051-7608158)
chr2 (23-132)||(5404996-5405105)
chr2 (23-126)||(6223072-6223175)
chr2 (23-130)||(8042175-8042282)
chr2 (23-130)||(19141219-19141326)
chr2 (13-130)||(39358148-39358265)
chr2 (23-117)||(16865069-16865163)
chr2 (23-130)||(2183110-2183217)
chr2 (23-121)||(43444693-43444791)
chr2 (23-125)||(44365164-44365266)
chr2 (26-122)||(11931701-11931797)
chr2 (34-125)||(32774598-32774689)
chr2 (23-125)||(19262687-19262789)
chr2 (25-130)||(9006939-9007044)
chr2 (23-127)||(24251965-24252069)
chr2 (23-118)||(11841746-11841841)
chr2 (50-125)||(13598449-13598523)
chr2 (26-130)||(22839083-22839187)
chr2 (23-127)||(38291957-38292061)
chr2 (34-121)||(33607387-33607474)
chr2 (23-126)||(36072180-36072283)
chr2 (29-118)||(13117483-13117572)
chr2 (10-127)||(24093676-24093794)
chr2 (34-97)||(44644905-44644968)
chr2 (23-129)||(19165936-19166041)
chr2 (25-121)||(42133763-42133859)
chr2 (35-125)||(30548839-30548929)
chr2 (23-76)||(9172299-9172352)
chr2 (34-127)||(31904044-31904137)
chr2 (40-121)||(9553890-9553967)
chr2 (34-101)||(36177741-36177809)
chr2 (23-130)||(44563150-44563258)
[»] chr6 (38 HSPs)
chr6 (23-130)||(6563228-6563335)
chr6 (23-130)||(24624094-24624201)
chr6 (23-130)||(4147933-4148040)
chr6 (10-125)||(4440857-4440972)
chr6 (23-130)||(17257804-17257911)
chr6 (23-130)||(19088111-19088218)
chr6 (23-130)||(32414832-32414939)
chr6 (23-130)||(17213937-17214044)
chr6 (23-130)||(29790208-29790315)
chr6 (23-125)||(15383083-15383185)
chr6 (23-125)||(22054779-22054881)
chr6 (23-124)||(31569179-31569280)
chr6 (23-130)||(18668841-18668948)
chr6 (23-122)||(20226451-20226550)
chr6 (23-122)||(22120435-22120534)
chr6 (39-130)||(25475977-25476068)
chr6 (23-121)||(28477764-28477862)
chr6 (23-127)||(15337493-15337597)
chr6 (23-130)||(32671818-32671925)
chr6 (23-121)||(29693894-29693992)
chr6 (49-125)||(3989442-3989518)
chr6 (23-123)||(17155158-17155258)
chr6 (39-130)||(10520470-10520561)
chr6 (23-129)||(5495252-5495358)
chr6 (23-125)||(31869715-31869817)
chr6 (23-95)||(2360027-2360099)
chr6 (23-102)||(1040854-1040933)
chr6 (23-123)||(14214066-14214166)
chr6 (50-121)||(21540809-21540880)
chr6 (23-124)||(3623863-3623963)
chr6 (16-77)||(12226030-12226091)
chr6 (34-130)||(20437177-20437274)
chr6 (23-95)||(10298726-10298798)
chr6 (23-103)||(24955549-24955629)
chr6 (16-101)||(19240738-19240823)
chr6 (23-76)||(23158062-23158115)
chr6 (29-88)||(3321706-3321766)
chr6 (23-59)||(26567297-26567333)
[»] chr5 (32 HSPs)
chr5 (24-130)||(38916404-38916510)
chr5 (23-130)||(978079-978186)
chr5 (23-130)||(8086183-8086290)
chr5 (23-125)||(14634310-14634412)
chr5 (23-130)||(9502780-9502887)
chr5 (23-130)||(18094234-18094341)
chr5 (23-130)||(33387222-33387329)
chr5 (23-123)||(3472430-3472530)
chr5 (23-130)||(12007785-12007892)
chr5 (56-130)||(18598546-18598620)
chr5 (17-122)||(27579577-27579681)
chr5 (23-130)||(33587622-33587729)
chr5 (23-121)||(39776641-39776739)
chr5 (19-101)||(11251145-11251227)
chr5 (23-125)||(34111969-34112071)
chr5 (23-123)||(30355027-30355127)
chr5 (23-122)||(7224175-7224274)
chr5 (39-121)||(11785895-11785977)
chr5 (23-125)||(32017220-32017322)
chr5 (23-116)||(12456793-12456886)
chr5 (26-130)||(24992294-24992398)
chr5 (23-130)||(40156200-40156307)
chr5 (23-101)||(6996012-6996089)
chr5 (26-75)||(26387035-26387084)
chr5 (66-130)||(10696792-10696856)
chr5 (34-129)||(5947715-5947810)
chr5 (26-130)||(24916402-24916508)
chr5 (23-86)||(3422363-3422429)
chr5 (23-122)||(20692544-20692641)
chr5 (68-130)||(9050763-9050825)
chr5 (23-113)||(18998706-18998796)
chr5 (30-76)||(31197850-31197896)
[»] chr8 (31 HSPs)
chr8 (23-130)||(616785-616892)
chr8 (23-130)||(623178-623285)
chr8 (23-125)||(2766201-2766303)
chr8 (23-130)||(18044427-18044534)
chr8 (23-130)||(42587401-42587508)
chr8 (23-125)||(3100648-3100750)
chr8 (23-136)||(36642011-36642125)
chr8 (23-125)||(40494391-40494493)
chr8 (25-121)||(13216876-13216972)
chr8 (34-130)||(24524102-24524198)
chr8 (40-130)||(6414135-6414225)
chr8 (23-125)||(14237287-14237389)
chr8 (23-125)||(32998457-32998559)
chr8 (17-130)||(5878319-5878431)
chr8 (23-127)||(38957175-38957279)
chr8 (29-129)||(22489433-22489533)
chr8 (39-127)||(35403521-35403609)
chr8 (26-130)||(36167078-36167182)
chr8 (23-121)||(41263821-41263919)
chr8 (16-117)||(3370402-3370503)
chr8 (26-123)||(18090338-18090434)
chr8 (23-130)||(132019-132126)
chr8 (23-125)||(4270245-4270347)
chr8 (49-130)||(8394348-8394429)
chr8 (29-130)||(33700232-33700334)
chr8 (23-121)||(18035111-18035209)
chr8 (23-124)||(5173259-5173360)
chr8 (23-86)||(32780081-32780144)
chr8 (68-130)||(13217219-13217281)
chr8 (23-103)||(11637811-11637891)
chr8 (68-132)||(38497083-38497147)
[»] scaffold0295 (2 HSPs)
scaffold0295 (23-130)||(13870-13977)
scaffold0295 (71-130)||(9374-9433)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-130)||(100800-100907)
[»] scaffold0003 (1 HSPs)
scaffold0003 (23-130)||(161990-162097)
[»] scaffold0225 (1 HSPs)
scaffold0225 (23-127)||(8986-9090)
[»] scaffold0029 (1 HSPs)
scaffold0029 (23-127)||(138183-138287)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-123)||(67922-68022)
[»] scaffold0262 (1 HSPs)
scaffold0262 (23-127)||(22785-22889)
[»] scaffold0595 (1 HSPs)
scaffold0595 (23-116)||(3964-4057)
[»] scaffold0056 (1 HSPs)
scaffold0056 (26-130)||(70963-71066)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-125)||(217031-217131)


Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 312
Target Start/End: Original strand, 28030827 - 28031126
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28030827 aatatcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 28030926  T
Q  116 ttgaaacggatggagcagctttttcttggtatcgatggccgagaatatgatgatagctaccaggacaaagatctgcatgcaaattagnnnnnnncgacta 215  Q
    |||||||| |||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  28030927 ttgaaacgtatggagcaactttttcttattatcggtggccgagaatatgatgatagctaccaggacaaagatctgcatgcaaattagtttgtttcgacta 28031026  T
Q  216 ---tggtgtgccactagtagatcaagagtggctggatcgcttatgattcattacctgccaaagtgattcttgcaccattttgaatatgtgaagactatcc 312  Q
       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28031027 tggtggtgtgccactagtagatcaagagtggctggatcacttatgattcattacctgccaaagtgattcttgcaccattttgaatatgggaagactatcc 28031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 6766481 - 6766374
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  6766481 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 6766382  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  6766381 ggagggag 6766374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 16120593 - 16120700
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  16120593 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaac 16120692  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  16120693 ggagggag 16120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 36757639 - 36757746
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||     
T  36757639 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaat 36757738  T
Q  123 ggatggag 130  Q
    ||||||||    
T  36757739 ggatggag 36757746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 38153417 - 38153528
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 109  Q
    |||||||| ||| |||||| |||||||| ||||||||||||||||||||||||| || | |||||||||||| |||| ||||||||  |||||||| |||    
T  38153417 tcgaagaacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgaca 38153516  T
Q  110 tgtattttgaaa 121  Q
    ||||||||||||    
T  38153517 tgtattttgaaa 38153528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 6402563 - 6402670
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  6402563 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 6402662  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  6402663 ggagggag 6402670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 11641220 - 11641327
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||     
T  11641220 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaat 11641319  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  11641320 ggagggag 11641327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 17306063 - 17305956
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  17306063 tacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 17305964  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  17305963 ggagggag 17305956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 30003642 - 30003535
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||||||| |||||||   ||||||||||||||||    
T  30003642 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttgaaac 30003543  T
Q  123 ggatggag 130  Q
    ||||||||    
T  30003542 ggatggag 30003535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42735318 - 42735428
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaa---gtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttga 119  Q
    |||||||||| |||| ||||||||| |||||||||||   |||| |||||||||||||| || |||| |||||||||||| |||  ||||||||||||||    
T  42735318 tacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaataattgaacatgtattttga 42735417  T
Q  120 aacggatggag 130  Q
    |||||||||||    
T  42735418 aacggatggag 42735428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 52024135 - 52024028
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| ||||| |||||||||||||  ||||||||||| ||| |||||||||||| | || |||| ||||||||||||||||  |||||||||||||||||    
T  52024135 tacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 52024036  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  52024035 ggagggag 52024028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 27292749 - 27292640
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  |||||||||||||||||||||||||| ||| || |||| |||| |||||||||||   |||| |||||||||||    
T  27292749 tacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaattggacatatattttgaaac 27292650  T
Q  123 ggatggagca 132  Q
    ||| ||||||    
T  27292649 ggagggagca 27292640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 44644510 - 44644615
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    ||||||||||||| ||||||||| || |||||||| |||  |||||||||||||||| |||||| ||||||| |||||||| ||||||||||| ||| ||    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatgg 44644609  T
Q  125 atggag 130  Q
    | ||||    
T  44644610 agggag 44644615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 48526837 - 48526936
Alignment:
Q  23 tacatgctaacatttatatttata-tgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||| |||||||||||||||||| | ||| ||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||    
T  48526837 tacatactaacatttatatttataatattaattaaaaa-tatggtcaaagtaaatcatgtaaataatgtacattgcaaaaatgcaatatctattttgaaa 48526935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 9342798 - 9342905
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| |||  ||||||||||||| || ||||| |||||||||||||||   |||||| |||||||||    
T  9342798 tacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaattagacatgttttttgaaac 9342897  T
Q  123 ggatggag 130  Q
    ||||||||    
T  9342898 ggatggag 9342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 36399207 - 36399100
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||| | || |||| ||||||||||||||||   ||||||||||||||||    
T  36399207 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 36399108  T
Q  123 ggatggag 130  Q
    ||||||||    
T  36399107 ggatggag 36399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 40771925 - 40772032
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||| ||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  40771925 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 40772024  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  40772025 ggagggag 40772032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 44647866 - 44647973
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| || |||||||| |||  ||||| |||||||||| |||||| ||||||| |||||||| ||||||||||| |||     
T  44647866 tacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaat 44647965  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  44647966 ggagggag 44647973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 24321377 - 24321261
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtata--gtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgta 113  Q
    |||||| |||||||||| |||| ||||||||  ||||||||||| ||||  |||||||||| ||| || |||| |||||||||||||||| | |||||||    
T  24321377 aatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattcgacatgta 24321278  T
Q  114 ttttgaaacggatggag 130  Q
    |||| ||||||| ||||    
T  24321277 ttttaaaacggagggag 24321261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 30701827 - 30701720
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||| |||||||   ||||||||||||||||    
T  30701827 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttgaaac 30701728  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  30701727 ggagggag 30701720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 4302227 - 4302125
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||  |||||||||||  ||  ||||||||||||| ||||||| || |||||||||||||  |||||||||| | ||||    
T  4302227 tacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaaattgaacatgtattataaaac 4302128  T
Q  123 gga 125  Q
    |||    
T  4302127 gga 4302125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 40977641 - 40977743
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||| ||||| || |||| | ||||||||||||||   |||||||||||| |||    
T  40977641 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaattggacatgtattttgcaac 40977740  T
Q  123 gga 125  Q
    |||    
T  40977741 gga 40977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 26910183 - 26910091
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 117  Q
    |||| ||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||    
T  26910183 catgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattatacatgtatttt 26910091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42788695 - 42788802
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||| || |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||||||| |||||||   |||| ||||||||||     
T  42788695 tacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatatattttgaaat 42788794  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  42788795 ggagggag 42788802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 19711845 - 19711940
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||| || || ||||||||||||||||||||| |||||| |    |||||| ||||||| ||||| |||||||||||| | ||||||||||||||    
T  19711845 tacatgctatcacttgtatttatatgttagttaaaaaatatagtta----aagtcacgtaaatagtgcacgttgcaaaaatgcgatatgtattttgaaac 19711940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 30385298 - 30385405
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||| ||||||||||   |||| |||| ||||||||  |||| ||| ||||||||||| |||     
T  30385298 tacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacattataaaattgcgacatgtattttaaaat 30385397  T
Q  123 ggatggag 130  Q
     |||||||    
T  30385398 agatggag 30385405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 25695508 - 25695404
Alignment:
Q  24 acatgctaacatttatatttatatgttagttaaaaag---tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaa 120  Q
    |||||||||||||||||||||||| |||||||||||    ||| ||||| | |||| || | | ||||||||||||||||||||  | || |||||||||    
T  25695508 acatgctaacatttatatttatatattagttaaaaaaaaatatggtcaacgcaagtgatatgattaatgcacattgcaaaaatgtgaaatttattttgaa 25695409  T
Q  121 acgga 125  Q
    |||||    
T  25695408 acgga 25695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 3485360 - 3485459
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| |||||||| ||||||||| ||||||||||| |||  ||||||||||| |||  |||| |||| |||| |||| | | ||||||||||| ||||    
T  3485360 tacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatgtattttaaaac 3485459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 31445032 - 31444925
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||| ||||||| | ||||||| ||||||||||| ||| ||||| ||| |  ||| |||||||||||| || |||| ||  ||||||||||| ||||    
T  31445032 tacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaaggtacgctatgcaaataatgcacagtgtaaaattgtgacatgtattttaaaac 31444933  T
Q  123 ggatggag 130  Q
    || |||||    
T  31444932 ggttggag 31444925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 40800540 - 40800638
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||||||||| |||| |||| |||||||||||  ||| |||||||||||| |||| | |||||||||||| |||| | | |||| ||||||||||    
T  40800540 tacatgctaacatttgtatt-atatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattgtaaaattacgacatatattttgaaa 40800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 15382579 - 15382681
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| |||| |||| ||||||||| ||| |||||||   | |||| ||||||| |||| |||| || |||||| |||| ||| ||||||||||||||||    
T  15382579 tacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatgtattttgaaac 15382678  T
Q  123 gga 125  Q
    |||    
T  15382679 gga 15382681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 34635016 - 34634914
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| |||||||| ||||||||| ||||||||||| |||  ||||| ||||| |||| || | | |||||||||||  ||| |||| ||||| |||||    
T  34635016 tacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaaaacttcacattgcaaagttgcgacatttatttagaaac 34634917  T
Q  123 gga 125  Q
    |||    
T  34634916 gga 34634914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 7568645 - 7568690
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 74  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||    
T  7568645 ctaacatttatatttatatattagttaaaaagtagagttaaagtaa 7568690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 48375111 - 48375018
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    |||||||||| |||| ||||||||  ||||||||||| |||  ||||| ||||| | || ||||||| |||||||||||||  ||||| |||||    
T  48375111 tacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaattgaacatatattt 48375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 50972794 - 50972892
Alignment:
Q  30 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagtca----tgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    |||||||| ||||||||| ||| |||||||||||  |||||||||||||    ||| | || |||| ||||||||||||  ||||||| ||||||||||    
T  50972794 taacatttgtatttatatattatttaaaaagtatgttcaaagtaagtcagtcatgtgattagtgcaaattgcaaaaatgtgacatgtaatttgaaacgg 50972892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 15912521 - 15912585
Alignment:
Q  55 aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttga 119  Q
    ||||||||| |||||||||||||| || |||| ||||||||| ||||||   |||||||||||||    
T  15912521 aaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 15912585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 27984664 - 27984558
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| |||||||||| ||||  ||| ||||||||||| ||| |||||||||||  |||| |||| ||||  ||| |||| ||  ||||||||||| ||||    
T  27984664 tacaagctaacatttgtattcgtatattagttaaaaa-tatggtcaaagtaagcaatgtgaatagtgcatgttgtaaaattgtgacatgtattttaaaac 27984566  T
Q  123 ggatggag 130  Q
    ||||||||    
T  27984565 ggatggag 27984558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 52163615 - 52163677
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattg 96  Q
    |||||||||||||| ||||| ||||| |||  |||||||| ||||||| || |||||||||||    
T  52163615 atttatatttatatattagtaaaaaaatatgatcaaagtatgtcatgtcaacaatgcacattg 52163677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 9881398 - 9881321
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataa 87  Q
    ||||| || ||| |||||| |||||||||||| ||||| ||||||||||| ||| || ||| ||||| |||| |||||    
T  9881398 tcgaacaacatcttacatgataacatttatatgtatatattagttaaaaattatggttaaaataagttatgtgaataa 9881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 16689917 - 16689840
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||||||| ||||||| ||| |||  ||||||||||| |||| |||| ||||||| | |||| ||| ||||||||||    
T  16689917 tatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacatcgtaaaattgctacatgtattt 16689840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 22575740 - 22575776
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaa 59  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  22575740 tacatgctaacatttgtatttatatattagttaaaaa 22575776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 36523108 - 36523228
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 109  Q
    ||||| || ||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||    
T  36523108 tcgaacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgcaaaaatgcgaca 36523207  T
Q  110 tgtattttgaaacggatggag 130  Q
    | |||||||||||||||||||    
T  36523208 tatattttgaaacggatggag 36523228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 43967832 - 43967725
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  43967832 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaattgaacatgtattttgaaac 43967733  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  43967732 ggaaggag 43967725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 44232230 - 44232337
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  44232230 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaac 44232329  T
Q  123 ggatggag 130  Q
    ||||||||    
T  44232330 ggatggag 44232337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 25101826 - 25101731
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  25101826 atgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaataatacacattgcaaaaatgcaacatgtattttgaaa 25101731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 38416803 - 38416910
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  38416803 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 38416902  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  38416903 ggagggag 38416910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 2571029 - 2571133
Alignment:
Q  17 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||| ||| |||||| |||||||||||||  |||||||  ||||||||||    
T  2571029 atatcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattt 2571128  T
Q  117 tgaaa 121  Q
    |||||    
T  2571129 tgaaa 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 5428685 - 5428584
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| || |||||||||||||  |||||||||||||||| ||||| ||||||||||| |||| |||||||||| ||||||| ||||||||||||||||    
T  5428685 tacatgatagcatttatatttat--gttagttaaaaagtatggtcaacgtaagtcatgtgaatagtgcacattgccaaaatgcgacatgtattttgaaac 5428588  T
Q  123 ggat 126  Q
    ||||    
T  5428587 ggat 5428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 39307805 - 39307698
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| ||||||||| ||||||||| ||||||||||||||   |||||||||||||||| ||||  | | ||||||||||||| ||||||||||||||||    
T  39307805 tacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaatgcgacatgtattttgaaac 39307706  T
Q  123 ggatggag 130  Q
    ||||||||    
T  39307705 ggatggag 39307698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 2760880 - 2760987
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  2760880 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 2760979  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  2760980 ggagggag 2760987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 26170095 - 26169988
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||| ||| || |||| ||||||||||||||||   ||||||||||||||||    
T  26170095 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 26169996  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  26169995 ggagggag 26169988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 29830452 - 29830345
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||  ||||||   ||||||||||||||||    
T  29830452 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaaaaaattggacatgtattttgaaac 29830353  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  29830352 ggagggag 29830345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 35381047 - 35381154
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| ||||||||| ||||||   ||||||||||||||||    
T  35381047 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaac 35381146  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  35381147 ggagggag 35381154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 54330843 - 54330950
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || ||||  |||||||||||||||   |||||||||| |||||    
T  54330843 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaattggacatgtatttcgaaac 54330942  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  54330943 ggagggag 54330950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 55209727 - 55209834
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||| ||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  55209727 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaattggacatgtattttgaaac 55209826  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  55209827 ggagggag 55209834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 25296733 - 25296835
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   | ||||||||||||||    
T  25296733 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagatatgtattttgaaac 25296832  T
Q  123 gga 125  Q
    |||    
T  25296833 gga 25296835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 12625360 - 12625260
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| |||| |||||||||||  |||||||||||||||||    
T  12625360 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaattgaacatgtattttgaaac 12625261  T
Q  123 g 123  Q
    |    
T  12625260 g 12625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 55800941 - 55800841
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  || |||||| |||||||||    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaagatgtatattgaaacgg 55800842  T
Q  125 a 125  Q
    |    
T  55800841 a 55800841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 3037089 - 3036990
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||| |||| | ||||||| | || | | ||||||||||||||||    
T  3037089 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatgtattttgaaac 3036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 7614724 - 7614617
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| |||||| |||||||||| | ||||  | |||| |||| | | ||||||||||||||||    
T  7614724 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattgtaaaattacgacatgtattttgaaac 7614625  T
Q  123 ggatggag 130  Q
    ||||||||    
T  7614624 ggatggag 7614617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 34652211 - 34652302
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||| ||||||||||||||||||||| ||| ||| ||||||||| |||||||| | |||||| ||||||||  |||||||||||||||||||    
T  34652211 atttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattacaaaaatgtgacatgtattttgaaacgga 34652302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 38721446 - 38721339
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| || |||||||| |||  ||||| |||||||||| |||||| ||||||| |||||||| ||||||||||| |||     
T  38721446 tacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaat 38721347  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  38721346 ggagggag 38721339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 27407773 - 27407879
Alignment:
Q  24 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    ||||||||| |||| ||||||||| ||||||||||||||  |||||||||||| |||| |||| | |||| |||||||||||  |||||||||||||| |    
T  27407773 acatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaaatgcgtcatgtattttgaaatg 27407872  T
Q  124 gatggag 130  Q
    || ||||    
T  27407873 gagggag 27407879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 37767104 - 37767218
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| ||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||| ||||||| |||| ||| ||||| ||| ||||  |||    
T  37767104 aatatcttacattctaacatttgtatttatatatacgttaaaaagtatagtcaaagtaagtcacgtaaatagtgcatatttcaaaattgcgacattcatt 37767203  T
Q  116 ttgaaacggatggag 130  Q
    || ||||||| ||||    
T  37767204 ttaaaacggagggag 37767218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 29051782 - 29051689
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 127  Q
    |||| ||||||||| ||||||||||| ||| |||||||||||| |||| ||||||| | |||| |||| ||||||||||||||| |||||||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaattgcaacatgtattttaaaacggatg 29051689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 4467672 - 4467744
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacatt 95  Q
    |||||||||| |||| ||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  4467672 tacatgctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagtcaagtaaataatgcacatt 4467744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 55191931 - 55191831
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    |||||||| |||| |||||| |  ||| ||||||||||||||||||||||||||  | |||| ||||||||||||||||  ||||| |||||||||||||    
T  55191931 catgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgaacatatattttgaaacgg 55191832  T
Q  125 a 125  Q
    |    
T  55191831 a 55191831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 12240331 - 12240430
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||| ||||||   ||||||||||||||||    
T  12240331 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaac 12240430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 35686482 - 35686383
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||  ||||||||||||||| |||||||||||| | || |||| ||||||||||||||||   ||||||||||||||||    
T  35686482 tacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 35686383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 38716995 - 38716897
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  38716995 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtca-attaatagtgcacattgcaaaaattggacatgtattttgaaac 38716897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 47386439 - 47386546
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||| ||||||    ||||||||||||||||    
T  47386439 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagtggacatgtattttgaaac 47386538  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  47386539 ggagggag 47386546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 25918312 - 25918206
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||| ||| ||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  25918312 tacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 25918213  T
Q  123 ggatgga 129  Q
    |||||||    
T  25918212 ggatgga 25918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 31010330 - 31010224
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| |||||||| |||||||   | |||||||    
T  31010330 aatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaattggatatgtatt 31010231  T
Q  116 ttgaaac 122  Q
    |||||||    
T  31010230 ttgaaac 31010224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 50205847 - 50205745
Alignment:
Q  28 gctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 127  Q
    ||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| |||||||| ||||||    ||||||||||||||||| |||    
T  50205847 gctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaacttgacatgtattttgaaacgaatg 50205748  T
Q  128 gag 130  Q
    |||    
T  50205747 gag 50205745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 30446406 - 30446307
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| |||||||||| ||||||||| ||||| ||||| ||  ||||||||||||||||| ||||||||| ||| |||| |||| ||||| ||||||||||    
T  30446406 tacaggctaacatttgtatttatatattagtcaaaaa-tagggtcaaagtaagtcatgtgaataatgcagattacaaacatgcgacatgcattttgaaac 30446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 17610389 - 17610282
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  |||| |||||| ||| |||||||||||||| || |||| |||| |||||||||||   ||||||||||| ||||    
T  17610389 tacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttaaaac 17610290  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  17610289 ggagggag 17610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 26125817 - 26125710
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || ||||||||| |||| ||||||  ||  | |||||||||||    
T  26125817 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaattgaatttatattttgaaac 26125718  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  26125717 ggagggag 26125710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 45291941 - 45291862
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaa 102  Q
    |||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||| || |||| ||||||||| |||||    
T  45291941 tacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaaa 45291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 19433511 - 19433614
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtata----gtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 118  Q
    |||||||||| |||| ||||||||   |||||||||||||||    |||||||||||||| || || | ||||||||||||||||  |||||||||||||    
T  19433511 tacatgctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgcaaaaattgaacatgtattttg 19433610  T
Q  119 aaac 122  Q
    ||||    
T  19433611 aaac 19433614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 27755808 - 27755730
Alignment:
Q  43 tatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||||||||||||||| |||||| ||||| || | || |||| ||||| ||||||||| |||||||||||||||    
T  27755808 tatatgttagttaaaaagtatggtcaaaataagttatatgaacaatgtacattacaaaaatgcgacatgtattttgaaa 27755730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 20875403 - 20875504
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||| |||||||| |||||||| ||||||||||| ||| |||||||||| | || | |||| ||||||||  |||| | |||||||||||||||||| ||    
T  20875403 atgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtgcacattttaaaattacaacatgtattttgaaacaga 20875502  T
Q  126 tg 127  Q
    ||    
T  20875503 tg 20875504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 23360276 - 23360180
Alignment:
Q  31 aacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||| |||| |||| ||||||||||| ||  ||||||||||||||||  |||| |||| ||||||||||||| ||||||||||||||| | ||||||    
T  23360276 aacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatg--aatagtgcatattgcaaaaatgcgacatgtattttgaaatgaatggag 23360180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 9029595 - 9029712
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaa---aatgcaacatgt 112  Q
    |||||| ||| |||||| |||| ||||||||  ||||||||||||||| |||||||||||| | ||||||| | || ||||||||   |||   ||||||    
T  9029595 aatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtaaatagtacagattgcaaaattaattggacatgt 9029694  T
Q  113 attttgaaacggatggag 130  Q
    ||||| ||||||||||||    
T  9029695 attttaaaacggatggag 9029712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 56297858 - 56297948
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    |||||||||||| ||||||||| |||||||| || ||| ||||||  |||| |||| ||||||| |||||| |||||| | ||||||||||    
T  56297858 atgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaaatacgacatgtattt 56297948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 30191619 - 30191723
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| |||||| |||||||||||||||||| || || ||||  ||     ||||||||  |||| |||| ||||||||| |||| |||||||||||||    
T  30191619 aatatcttacatgttaacatttatatttatatattcgtaaaaacata-----aaagtaagctatgtgaatagtgcacattgtaaaattgcaacatgtatt 30191713  T
Q  116 ttgaaacgga 125  Q
    ||||||||||    
T  30191714 ttgaaacgga 30191723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 34323133 - 34323076
Alignment:
Q  68 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||||||||||||| |||||||||||||  ||||||||  ||||||||||||||||||    
T  34323133 aaagtaagtcatgtgaataatgcacattataaaaatgcgtcatgtattttgaaacgga 34323076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 34316626 - 34316536
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 117  Q
    |||||||||||| ||||||||| |||||||| || |||  |||||||||||||| |||||| |||||| || |||||| | |||| ||||||    
T  34316626 atgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtgcacactgtaaaaatacgacatatatttt 34316536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 19595814 - 19595734
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaat 103  Q
    |||||||||| |||| ||||||||  ||||||||| ||||| || ||||||||||| || |||| |||| |||| ||||||    
T  19595814 tacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgcatattgtaaaaat 19595734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 10550535 - 10550434
Alignment:
Q  23 tacatgctaacatttatatttatatgttagtta--aaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaa 120  Q
    ||||||||||||||| ||||||||| |||||||  |||| ||| || |||||||  ||||| |||| |||| |||| |||| |||||||  |||||| ||    
T  10550535 tacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaattgcaacagatattttaaa 10550436  T
Q  121 ac 122  Q
    ||    
T  10550435 ac 10550434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 19903804 - 19903854
Alignment:
Q  24 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 74  Q
    |||||||||||||| ||||||||| ||||||||||  ||| ||||||||||    
T  19903804 acatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaa 19903854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 50620835 - 50620937
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||  ||||||||  |||||||||| |||| |||||||||||| | || |||| |||| ||||| |||||   |||| |||||| ||||    
T  50620835 tacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaattggacatatattttaaaac 50620934  T
Q  123 gga 125  Q
    |||    
T  50620935 gga 50620937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 40682720 - 40682627
Alignment:
Q  30 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    |||||||| ||||||||| |   ||||||||||| || ||| ||| || |||||| | ||||||||| ||||||||  ||| ||||||||||||    
T  40682720 taacatttctatttatatatcgattaaaaagtatggttaaaataaatcttgtaaacactgcacattgtaaaaatgcggcatatattttgaaacg 40682627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 36341742 - 36341622
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 109  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||| |||||||||||||||||| |||    
T  36341742 tcgaacaacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgaca 36341643  T
Q  110 tgtattttgaaacggatggag 130  Q
    |||||||||||||| ||||||    
T  36341642 tgtattttgaaacgaatggag 36341622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 28061668 - 28061775
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  28061668 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 28061767  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  28061768 ggagggag 28061775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 36623417 - 36623310
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  36623417 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 36623318  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  36623317 ggagggag 36623310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 47156136 - 47156029
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  47156136 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 47156037  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  47156036 ggagggag 47156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 38851993 - 38852107
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   |||||||||    
T  38851993 aatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtatt 38852092  T
Q  116 ttgaaacggatggag 130  Q
    |||||||||| ||||    
T  38852093 ttgaaacggagggag 38852107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 41898097 - 41897990
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  41898097 tacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 41897998  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  41897997 ggagggag 41897990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42890496 - 42890603
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| |||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  42890496 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaattggacatgtattttgaaac 42890595  T
Q  123 ggatggag 130  Q
    ||||||||    
T  42890596 ggatggag 42890603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 30342183 - 30342079
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| |||| |||| ||||||||  |||||||||||||||||||||||||| ||| || |||||||||||||||||||||  | |||||||||| ||||    
T  30342183 tacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaaattgatcatgtattttaaaac 30342084  T
Q  123 ggatg 127  Q
    |||||    
T  30342083 ggatg 30342079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 8683923 - 8683820
Alignment:
Q  27 tgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggat 126  Q
    |||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| |||||||   ||||||||||| ||||| ||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtattttaaaacgaat 8683824  T
Q  127 ggag 130  Q
    ||||    
T  8683823 ggag 8683820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 32431511 - 32431618
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| |||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   |||| |||||||||||    
T  32431511 tacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacatatattttgaaac 32431610  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  32431611 ggagggag 32431618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 40256166 - 40256064
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || ||||  |||||||||||||||   ||||||||||||||||    
T  40256166 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaattggacatgtattttgaaac 40256067  T
Q  123 gga 125  Q
    |||    
T  40256066 gga 40256064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 27045564 - 27045665
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||||||||||  ||||| |||| |  |||||| |||| |||||||||||||||||||||||    
T  27045564 atgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaattgcaacatgtattttgaaacgga 27045663  T
Q  126 tg 127  Q
    ||    
T  27045664 tg 27045665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 6766703 - 6766810
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||||||||  |||||||  ||||||||||| ||| |||||| ||||| |||| ||||||||| |||| |||| ||| ||||||||||||||||    
T  6766703 tacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatgtattttgaaac 6766802  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  6766803 ggagggag 6766810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 7439012 - 7438913
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||| ||||||| || ||||||||| |||||||||||   ||||||||||||||||    
T  7439012 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaattagacatgtattttgaaac 7438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 7457875 - 7457981
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||| | || |||| |||||||||||||| |   ||||||||||||||||    
T  7457875 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaacttagacatgtattttgaaac 7457973  T
Q  123 ggatggag 130  Q
    ||||||||    
T  7457974 ggatggag 7457981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 39130079 - 39130186
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| ||||||| |||||| || |||| ||||||||||||||||  || ||||||||| ||||    
T  39130079 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaattaaagatgtattttaaaac 39130178  T
Q  123 ggatggag 130  Q
    ||||||||    
T  39130179 ggatggag 39130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 40090071 - 40090178
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   |||| |||||| ||||    
T  40090071 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatatattttaaaac 40090170  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  40090171 ggagggag 40090178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 42662284 - 42662194
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||| ||||||||| ||||||||||||||| |||||||||||  |||| |||||| |||||||||||| ||| |||||||||||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaaga-atgtgaataatacacattgcaaaattgcgacatgtattttgaaacgga 42662194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 48602545 - 48602438
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| ||||||||| ||||||    |||||||||||||||    
T  48602545 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaattgggcatgtattttgaaac 48602446  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  48602445 ggagggag 48602438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 44732121 - 44732027
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 117  Q
    |||||||||| |||| ||||||||  |||||||||||||||  ||||||||||||| || |||| ||||||||||||||||  ||||||||||||    
T  44732121 tacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatttt 44732027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 46322144 - 46322225
Alignment:
Q  49 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||| ||| ||||    
T  46322144 ttagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaatggagggag 46322225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 11502733 - 11502832
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  |||||||||||||||  ||||||||||| | || ||||||||||||| |||||||   ||||||||||||||||    
T  11502733 tacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagttaagtcaataatgcacattacaaaaattggacatgtattttgaaac 11502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 16778614 - 16778507
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| ||||||||||| || || |||| |||||||||||||| |   ||||||||||||||||    
T  16778614 tacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 16778515  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  16778514 ggagggag 16778507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 20885212 - 20885105
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| | ||||||| ||||||   ||||||||||||||||    
T  20885212 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgtattttgaaac 20885113  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  20885112 ggagggag 20885105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 35117234 - 35117128
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||  |||||||||| |||| |||||||||||||| || |||| |||| |||||||||||  |||| ||||||| ||||    
T  35117234 tacatgctaatatttatatttatacattagttaaaa-gtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattgaacaggtattttaaaac 35117136  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  35117135 ggagggag 35117128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 7169224 - 7169130
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgg 128  Q
    |||| ||||||||| ||||||||||| |||||||||||||| |||||| ||||   |||||||||||| |   ||||||||||||||||||||||    
T  7169224 atttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgcaaaattatgacatgtattttgaaacggatgg 7169130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 4131656 - 4131760
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||| ||| ||||||||| ||||||||||| ||| || ||||||||| |||| |||| |  |||||| |||| ||| |||| |||||||||||    
T  4131656 tacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatatattttgaaac 4131755  T
Q  123 ggatg 127  Q
    |||||    
T  4131756 ggatg 4131760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 46479938 - 46479838
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| | | |||||||||||||| |  |||| ||||||||| ||||||  |||||||||||||||||    
T  46479938 tacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaattaaacatgtattttgaaac 46479839  T
Q  123 g 123  Q
    |    
T  46479838 g 46479838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 36585218 - 36585116
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  |||||| |||||||| || ||| ||||||| || |||| ||||||||||||||||   | ||||||||||||||    
T  36585218 tacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaattggatatgtattttgaaac 36585119  T
Q  123 gga 125  Q
    |||    
T  36585118 gga 36585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 2952521 - 2952424
Alignment:
Q  34 atttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||||||||  |||||||||||  ||| |||||||||||  | || |||||||||| ||| |||| ||||||| ||||||||||||||||||||    
T  2952521 atttatatttataaattagttaaaaaaatatggtcaaagtaagctacgtgaataatgcacgttgtaaaattgcaacacgtattttgaaacggatggag 2952424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 25566702 - 25566802
Alignment:
Q  24 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    ||||||||| |||| |||| |||  ||||||| ||||||| |||||||||||||| || |||| ||||||||| ||||||   |||||||||||||||||    
T  25566702 acatgctaatatttgtatt-atacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaacg 25566800  T
Q  124 ga 125  Q
    ||    
T  25566801 ga 25566802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 46103523 - 46103623
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||       | ||||||||| ||||||   ||||||||||||||||    
T  46103523 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtca-------agtgcacattgtaaaaattggacatgtattttgaaac 46103615  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  46103616 ggagggag 46103623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 5529120 - 5529016
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||| ||| ||||||||||| |||||||||| |||   | ||||||| || |||||| |||| |   ||||||||||||||||    
T  5529120 tacatgctaacatttttatttgtatattagttaaaaaatatagtcaaaataatctacgtaaatagtgtacattgtaaaattaggacatgtattttgaaac 5529021  T
Q  123 ggatg 127  Q
    |||||    
T  5529020 ggatg 5529016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 34750611 - 34750507
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgt-aaataatgcacattgcaaaaatgcaacatgta-ttttgaa 120  Q
    |||||| |||||||| ||||| ||| ||||||||||||||  ||||||||||||||||| ||||| | |||  |||||||||| ||||| || |||||||    
T  34750611 tacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaaatagttcacgatgcaaaaatgtaacatttatttttgaa 34750512  T
Q  121 acgga 125  Q
    |||||    
T  34750511 acgga 34750507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 42877495 - 42877388
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| |||| |||| ||||||||  ||||||||||||||| |||||||||||| |  | |||| |||||||| ||||| |   ||||||||||||||||    
T  42877495 tacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatgtattttgaaac 42877396  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  42877395 ggagggag 42877388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 6174945 - 6174839
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||  ||| ||||||||  ||||||||||| ||| |||| |||||||||  | |||| ||||| ||||||||||   |||| |||||||||||    
T  6174945 tacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaattggacatatattttgaaac 6174846  T
Q  123 ggatgga 129  Q
    |||||||    
T  6174845 ggatgga 6174839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 26161705 - 26161607
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||| |||| ||||||||| |||||||||||| || |||||| ||| |||||| |||| ||| ||||  | |||||  |||||||||||||||    
T  26161705 tacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcattatacaaatgtgacatgtattttgaaa 26161607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 3851190 - 3851082
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| ||| || ||| |||| ||||||||  ||||||||||||||| |||||||||||||| ||    ||||||||||||||||||   |||| ||||    
T  3851190 aatatcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaagtaagtcaagt---gaatgcacattgcaaaaattggacatatatt 3851094  T
Q  116 ttgaaacggatg 127  Q
    |||| |||||||    
T  3851093 ttgagacggatg 3851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 47525992 - 47526097
Alignment:
Q  26 atgctaacatttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    |||||||||||| ||||||||| |||||| ||||| |||  ||||||||||  | |||||||||||| | || |||| ||| |||| |||||| ||||||    
T  47525992 atgctaacatttgtatttatatattagttaaaaaaatatgatcaaagtaagctaggtaaataatgcataatgtaaaattgcgacatatattttaaaacgg 47526091  T
Q  125 atggag 130  Q
    ||||||    
T  47526092 atggag 47526097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 45331992 - 45331917
Alignment:
Q  52 gttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||| ||| ||||||||||||||| | ||||||||| |||||||||||   |||||| |||||||||||| ||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaaat---acatgtgttttgaaacggagggag 45331917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 49110630 - 49110730
Alignment:
Q  30 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgga 129  Q
    |||||||| |||| |||| ||||||||||| ||| |||||||||| |||| | |||| | ||||||  |||| ||  ||||||||||| |||||||||||    
T  49110630 taacatttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacattataaaattgtgacatgtattttaaaacggatgga 49110729  T
Q  130 g 130  Q
    |    
T  49110730 g 49110730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 16870641 - 16870728
Alignment:
Q  31 aacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 118  Q
    ||||||||||||||||| |||||||| || ||| |||||||||||| || | |||| |||| |||| ||||  || ||||||||||||    
T  16870641 aacatttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaaccgcgacatgtattttg 16870728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 35570202 - 35570309
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaag-----tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 117  Q
    |||||||||| |||| ||||| ||| |||||||||||      ||| ||||||||||||  ||| |||| ||||||||| |||| ||| |||||||||||    
T  35570202 tacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtcaaagtaagttttgtgaatagtgcacattgtaaaattgcgacatgtatttt 35570301  T
Q  118 gaaacgga 125  Q
    ||||||||    
T  35570302 gaaacgga 35570309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 41134641 - 41134743
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  |||||||     ||| ||||||||||||||  | |||| | ||||||| ||||||  |||||||||||| ||||    
T  41134641 tacatgctaatatttgtatttatacattagtta-----tatggtcaaagtaagtcaaatgaatagtacacattgtaaaaattgaacatgtattttaaaac 41134735  T
Q  123 ggatggag 130  Q
    ||||||||    
T  41134736 ggatggag 41134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 3785623 - 3785578
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 74  Q
    ||||||||| ||||||||| ||||||||||| ||| ||||||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaa 3785578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 26980125 - 26980056
Alignment:
Q  54 taaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    |||||| ||| |||||| ||||| |||| ||||||||| |||  |||| |||||||| ||||||||||||    
T  26980125 taaaaaatatggtcaaaataagttatgtgaataatgcatattataaaattgcaacatttattttgaaacg 26980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 39278484 - 39278525
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtata 64  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  39278484 tacatactaacatttatatttatatattagttaaaaaatata 39278525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 37467463 - 37467511
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 74  Q
    |||||||||||| ||||||||| ||||||||||| ||| || |||||||    
T  37467463 atgctaacatttgtatttatatattagttaaaaaatatggttaaagtaa 37467511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 38767221 - 38767265
Alignment:
Q  32 acatttatatttatatgttagttaaaaagtatagtcaaagtaagt 76  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||||    
T  38767221 acatttgtatttatatattagttaaaaaatatggtcaaagtaagt 38767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 44561906 - 44561793
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 109  Q
    ||||| || ||| ||||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||    
T  44561906 tcgaacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaacatgcaaca 44561807  T
Q  110 tgtattttgaaacg 123  Q
    ||||||||||||||    
T  44561806 tgtattttgaaacg 44561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 27334884 - 27334991
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  27334884 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 27334983  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  27334984 ggaaggag 27334991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 13499488 - 13499595
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  13499488 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 13499587  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  13499588 ggagggag 13499595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42490349 - 42490456
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  42490349 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 42490448  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  42490449 ggagggag 42490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 20765305 - 20765198
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  20765305 tacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 20765206  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  20765205 ggagggag 20765198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 21005402 - 21005295
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||| ||| ||||||||||| |||||||||||| | || |||| ||||| ||||||||||  |||||||||||||||||    
T  21005402 tacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgcaaaaattgaacatgtattttgaaac 21005303  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  21005302 ggagggag 21005295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 27010627 - 27010734
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||| | |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  27010627 tacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 27010726  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  27010727 ggagggag 27010734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 33415908 - 33415809
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||   ||||||||||||||||    
T  33415908 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgcaaaaattggacatgtattttgaaac 33415809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 39866294 - 39866401
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  39866294 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 39866393  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  39866394 ggagggag 39866401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42761636 - 42761743
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  42761636 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 42761735  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  42761736 ggagggag 42761743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 45613656 - 45613575
Alignment:
Q  49 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||   ||||| ||||||||||||||||||    
T  45613656 ttagttaaaaagtatagtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggacatgaattttgaaacggatggag 45613575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 19823994 - 19823902
Alignment:
Q  38 atatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  19823994 atatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagggag 19823902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 34912301 - 34912397
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||||||    
T  34912301 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacgga 34912397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 3430427 - 3430521
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 117  Q
    |||||||||| |||| |||| |||| ||||||||||| ||| |||||||||||| || |||||| ||||||||| |||| |||||||||||||||    
T  3430427 tacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattgtaaaattgcaacatgtatttt 3430521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 21797665 - 21797563
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||| ||| ||| || |||| ||||||||||||||||   ||||||||||||||||    
T  21797665 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 21797566  T
Q  123 gga 125  Q
    |||    
T  21797565 gga 21797563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 33803631 - 33803532
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaa-gtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||| ||||| |||||||||||||  ||||||||||| |||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||    
T  33803631 tacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaa 33803532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 44856455 - 44856396
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgta 82  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  44856455 tacatactaacatttgtatttatatgttagttaaaaagtatagttaaagtaagtcatgta 44856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 41252919 - 41253023
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||||||||||| ||||||||| ||||||||||| ||| || ||||||||  || | |||| ||||||||| |||| ||| |||| ||||||||||| ||    
T  41252919 atgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatattttgaaacaga 41253018  T
Q  126 tggag 130  Q
    |||||    
T  41253019 tggag 41253023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 43181508 - 43181616
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaa-gtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||| |||| |||||||||||||  ||||||||||| |||| |||||||||| ||| || |||| |||||||| | |||||  |||||||||||| |||    
T  43181508 tacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattacgaaaattaaacatgtatttttaaa 43181607  T
Q  122 cggatggag 130  Q
    |||||||||    
T  43181608 cggatggag 43181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 15332959 - 15333058
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| | | ||||||| |||  |||| |||| ||||||||| |||| ||| ||||||||||| ||||    
T  15332959 tacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaattgcgacatgtattttaaaac 15333058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 25527513 - 25527413
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||| | ||||||||| ||| ||| ||||||||||||| ||||   |||||||||||||||| |||||||||| |||||    
T  25527513 tacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaatat--cacattgcaaaaatgcgacatgtatttcgaaac 25527416  T
Q  123 gga 125  Q
    |||    
T  25527415 gga 25527413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 15568081 - 15568194
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| |||| | |||||||| ||||||||| ||||||||||| |||  ||||| |||   ||||||||||||||||||| |||| ||| |||| ||||    
T  15568081 aatatcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaactatgtaaataatgcacattgtaaaattgcgacat-tatt 15568179  T
Q  116 ttgaaacggatggag 130  Q
    ||||||| |||||||    
T  15568180 ttgaaacagatggag 15568194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 41751559 - 41751665
Alignment:
Q  19 atcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 118  Q
    |||||| |||||||||||| ||||||||| ||||||||||| |||  |||||||| || ||||||||| | || |||| |||| || ||||| ||||| |    
T  41751559 atcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtatgttatgtaaatattacatattgtaaaattgtaacatatatttcg 41751658  T
Q  119 aaacgga 125  Q
    |||||||    
T  41751659 aaacgga 41751665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 42049858 - 42049788
Alignment:
Q  55 aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||| ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||||| ||||||    
T  42049858 aaaaaatatagtcaaagtatgtcatgtaaattgtgcacattgcaaaaatgcggcatgtattttggaacgga 42049788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 54507750 - 54507648
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| || | ||||||||  |||||||||||||||| ||||| ||||||| || |||| |||| |||||||||||   | ||||||||||||||    
T  54507750 tacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgtattttgaaac 54507651  T
Q  123 gga 125  Q
    |||    
T  54507650 gga 54507648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 32220933 - 32220865
Alignment:
Q  62 atagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||||||||||| || |||| | ||||||||||||||  |||||||||||| ||||||||||||    
T  32220933 atagtcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttaaaacggatggag 32220865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 17643847 - 17643772
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgca 91  Q
    |||||| ||||||||||||||| |||||| || ||||||||||| |||||||| ||||| | |||| |||||||||    
T  17643847 aatatcttacatgctaacatttgtatttacatattagttaaaaaatatagtcacagtaaattatgttaataatgca 17643772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 43467923 - 43467997
Alignment:
Q  51 agttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||||||||| |||||||||||||| || |||| | ||||||||||||||    ||||||||||||||||||    
T  43467923 agttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaattggtcatgtattttgaaacgga 43467997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 15664092 - 15664204
Alignment:
Q  17 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||| |||||  |||||||| ||||||||| ||| ||||||| |||  ||||| ||||  ||||||||||||||||||| |||| ||| |||  |||||    
T  15664092 atatcttacatagtaacatttgtatttatatattaattaaaaaatatgatcaaattaagctatgtaaataatgcacattgtaaaattgcgaca-ctattt 15664190  T
Q  117 tgaaacggatggag 130  Q
    |||||| |||||||    
T  15664191 tgaaactgatggag 15664204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 22782357 - 22782273
Alignment:
Q  41 tttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||| ||||||||||| || ||||||||||||  |||| |||| ||||||||  |||| ||| ||||||| |||||||||||    
T  22782357 tttatattttagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttgaaacgga 22782273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 22786721 - 22786637
Alignment:
Q  41 tttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||| ||||||||||| || ||||||||||||  |||| |||| ||||||||  |||| ||| ||||||| |||||||||||    
T  22786721 tttatatattagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttgaaacgga 22786637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 30213913 - 30213845
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgca 91  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||| || |||| ||||    
T  30213913 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgca 30213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 37766145 - 37766049
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaa-----gtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||| ||||||||||||||||||| |||||||     |||| |||||| |||| ||||||||||||| |||  || |||||||||||| ||||||||    
T  37766145 tattcatatgttagttaaaaagtacagtcaaattatagtaaatcatgttaatagtgcacattgcaaatatgagacgtgtattttgaaatggatggag 37766049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 36227654 - 36227547
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||| || |||| ||| ||||||||||||||  | |||| ||| ||||||||||||  |||||| ||||| ||||    
T  36227654 tacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaaattgaacatgcattttaaaac 36227555  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  36227554 ggagggag 36227547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 27813445 - 27813511
Alignment:
Q  27 tgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcaca 93  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||| ||||  |||| |||| ||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 6910443 - 6910342
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||  ||||||||||| ||| || ||||||||||| || |||| || |||||| |||| |   ||||||||||||||||    
T  6910443 tacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatgtattttgaaac 6910344  T
Q  123 gg 124  Q
    ||    
T  6910343 gg 6910342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 30057405 - 30057310
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||||||   ||||||| ||||||||||| ||| || |||||| || |||| ||||||| || |||  ||||| | |||||||||||||||    
T  30057405 atgctaacatttgcttttatatattagttaaaaaatatggttaaagtatgttatgtgaataatgaacgttgtcaaaatactacatgtattttgaaa 30057310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 27813817 - 27813858
Alignment:
Q  86 aatgcacattgcaaaaatgcaacatgtattttgaaacggatg 127  Q
    ||||||||||| |||| |||||||||||||||||||| ||||    
T  27813817 aatgcacattgtaaaattgcaacatgtattttgaaacagatg 27813858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 33128065 - 33128125
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 76  Q
    |||||| |||||| ||| |||||||||||| | |||||||||||||||  ||||| |||||    
T  33128065 aatatcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataagt 33128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 42469635 - 42469722
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 127  Q
    |||||| || ||| ||||||| ||  || ||| ||||||| || |||||||| ||||| |||||||| ||||||||||| |||||||||    
T  42469635 tatttacatattaattaaaaaatacggttaaattaagtcacgtgaataatgcgcattgaaaaaatgcgacatgtatttt-aaacggatg 42469722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 7799956 - 7799856
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  7799956 tacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttgaaac 7799857  T
Q  123 g 123  Q
    |    
T  7799856 g 7799856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 7608158 - 7608051
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  7608158 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 7608059  T
Q  123 ggatggag 130  Q
    ||||||||    
T  7608058 ggatggag 7608051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 5405105 - 5404996
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  5405105 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 5405006  T
Q  123 ggatggagca 132  Q
    ||| ||||||    
T  5405005 ggagggagca 5404996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 6223175 - 6223072
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  6223175 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 6223076  T
Q  123 ggat 126  Q
    ||||    
T  6223075 ggat 6223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 8042175 - 8042282
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  8042175 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 8042274  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  8042275 ggagggag 8042282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 19141219 - 19141326
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  19141219 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 19141318  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  19141319 ggagggag 19141326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 39358265 - 39358148
Alignment:
Q  13 aagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgt 112  Q
    ||||| ||| |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||    
T  39358265 aagaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgt 39358166  T
Q  113 attttgaaacggatggag 130  Q
    ||||||||||||| ||||    
T  39358165 attttgaaacggagggag 39358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 16865163 - 16865069
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 117  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | |||| || | |||| |||||||| |||||||||||    
T  16865163 tacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaatgcgacatgtatttt 16865069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 2183110 - 2183217
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| |||| |||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  2183110 tacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 2183209  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  2183210 ggagggag 2183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 43444693 - 43444791
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| || | |||| |||||||||||||| |||| ||| |||||||||||||||    
T  43444693 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttgaaa 43444791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 44365266 - 44365164
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||| |||||||||||   ||||||||||||||||    
T  44365266 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac 44365167  T
Q  123 gga 125  Q
    |||    
T  44365166 gga 44365164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 11931797 - 11931701
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||||| ||||||||| ||||||||||| ||| |||||||||||| || | ||||||||| |||| |||| ||| ||||||||||||||||    
T  11931797 atgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgtattttgaaac 11931701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 32774689 - 32774598
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||  |||| |  ||||||||||||||||||||    
T  32774689 atttatatgtatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattataaaacttgaacatgtattttgaaacgga 32774598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 19262789 - 19262687
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||| |  |||||| ||||||||| ||||||   ||||||||||||||||    
T  19262789 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttgaaac 19262690  T
Q  123 gga 125  Q
    |||    
T  19262689 gga 19262687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 9006939 - 9007044
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||||||  |  | |||||||||||||| |||| ||| ||||||||||||||| ||    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaatgg 9007038  T
Q  125 atggag 130  Q
    ||||||    
T  9007039 atggag 9007044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 24252069 - 24251965
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| |||||| ||||| |||| |||||| || |||| |||| ||  | ||||||||||||||    
T  24252069 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacatattgtaaaattgtgaaatgtattttgaaac 24251970  T
Q  123 ggatg 127  Q
    |||||    
T  24251969 ggatg 24251965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 11841746 - 11841841
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 118  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||    
T  11841746 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattggacatgtattttg 11841841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 13598523 - 13598449
Alignment:
Q  50 tagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    |||||||||||||| ||||||||||||||| | |||| ||||||||| ||||||||||||| |||||| |||||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtgcacattg-aaaaatgcaacatatattttaaaacgga 13598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 22839083 - 22839187
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||||||||  ||||||||  |||||||||| ||| |||||||||||| |||| |||| |||||||||||||  || || || |||||||||| |||    
T  22839083 atgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaatttgtaaaatatattttgaaatgga 22839182  T
Q  126 tggag 130  Q
     ||||    
T  22839183 aggag 22839187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 38292061 - 38291957
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| |||||||| |||||||||  |||||||||| ||| |||||||||||| || | |||||||||  ||| |||| ||||  |||||||| |||||    
T  38292061 tacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagttatctgaataatgcatgttgtaaaattgcactatgtatttggaaac 38291962  T
Q  123 ggatg 127  Q
    |||||    
T  38291961 ggatg 38291957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 33607474 - 33607387
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||| ||||||||  |||||||||||||||| |||||||||||||  | |||| ||||||||| ||||||   |||||||||||||||    
T  33607474 atttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaa 33607387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 36072283 - 36072180
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||  ||||||||||| |||  |||||||||||||  | |||| |||| |||| ||||||   |||||||||||||||     
T  36072283 tacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgtattttgaaat 36072184  T
Q  123 ggat 126  Q
    ||||    
T  36072183 ggat 36072180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 13117483 - 13117572
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 118  Q
    |||| |||||||||||||| | ||||||||| ||| |||||||||||| || |||| | ||||||| | || |||| |||||||||||||    
T  13117483 ctaatatttatatttatatatcagttaaaaaatatggtcaaagtaagttatataaacagtgcacatggtaagaatgtaacatgtattttg 13117572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 24093676 - 24093794
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgc-aaaaatgcaa 107  Q
    ||||| || ||| ||||||||||||||| |||| ||||||||||| ||||||||| |||||||||| ||||   ||||  |||||| || |||||| | |    
T  24093676 tcgaacaacatcttacatgctaacatttgtatt-atatgttagttaaaaaagtatggtcaaagtaaatcatacgaatagcgcacatcgcaaaaaatacga 24093774  T
Q  108 catgtattttgaaacggatg 127  Q
    |||||||||||||| |||||    
T  24093775 catgtattttgaaatggatg 24093794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 44644968 - 44644905
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgc 97  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||  | |||| ||||||||||    
T  44644968 atttatatttatatattagttaaaaagtatggtcaaagtaagacaattgaatagtgcacattgc 44644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 19165936 - 19166041
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||||| || ||||||||| ||| |||||||  ||  |||||  ||||||||| |||| ||||||||||||||| || |||| |||||| ||||    
T  19165936 tacatgataacaattgtatttatatattaattaaaaaccatgatcaaaacaagtcatgtgaata-tgcacattgcaaaaacgcgacatatattttaaaac 19166034  T
Q  123 ggatgga 129  Q
    |||||||    
T  19166035 ggatgga 19166041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 42133859 - 42133763
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||||||| ||||||||| ||||||||||| |||  |||||||||   || | |||| ||||||||  |||| | | |||||||||||||||    
T  42133859 catgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtattttgaaa 42133763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 30548929 - 30548839
Alignment:
Q  35 tttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||||||||| || |||||||| ||| ||||| |||| |  ||||||||||||| ||||  ||| ||  ||||||| |||||||||||    
T  30548929 tttatatttatatattggttaaaaaatatggtcaacgtaatttgtgtaaataatgcatattgttaaattgtgacatgtaatttgaaacgga 30548839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 9172299 - 9172352
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 76  Q
    ||||||||||| ||| ||||||||  ||||||||||| ||| ||||||||||||    
T  9172299 tacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagt 9172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 31904044 - 31904137
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 127  Q
    |||||||||||||| ||||||||||| ||| |||| ||||||  |||| |||| || ||| |  |||| ||| | ||||||||| |||||||||    
T  31904044 atttatatttatatattagttaaaaaatatggtcagagtaagctatgtgaatagtgtacagtataaaattgcgatatgtattttaaaacggatg 31904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 9553890 - 9553967
Alignment:
Q  40 atttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||| ||||||||||| |   |||||||||||| ||    |||||| |||||| |||||||| |||||||||||||||    
T  9553890 atttatatattagttaaaaaatgcggtcaaagtaagttat----ataatgtacattgtaaaaatgcgacatgtattttgaaa 9553967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 36177741 - 36177809
Alignment:
Q  34 atttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 101  Q
    |||| ||||||||| |||||| ||||| ||| |||||| ||| |||||| |||||||| ||||||||||    
T  36177741 atttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaataatgcgcattgcaaaa 36177809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 44563150 - 44563258
Alignment:
Q  23 tacatgctaacatttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||||||| | ||||||||| ||| || ||||| |||  ||||||||||| || | |||| |||| |||  |||| ||| ||||||| ||| |||    
T  44563150 tacatgctaacatatgtatttatatattaattaaaaaaatatgatcaaagtaagttatatgaatagtgcatattataaaattgcgacatgtaatttaaaa 44563249  T
Q  122 cggatggag 130  Q
    |||||||||    
T  44563250 cggatggag 44563258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 6563335 - 6563228
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||    
T  6563335 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttgaaac 6563236  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  6563235 ggagggag 6563228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 24624094 - 24624201
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  24624094 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 24624193  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  24624194 ggagggag 24624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 4148040 - 4147933
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  4148040 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaac 4147941  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  4147940 ggagggag 4147933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 4440972 - 4440857
Alignment:
Q  10 tcgaagaatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 109  Q
    ||||| || ||| ||||||||||||||| |||||||||||||  |||||||||| |||||||||||| || | |||| |||||||| |||||||||||||    
T  4440972 tcgaacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacattacaaaaatgcaaca 4440873  T
Q  110 tgtattttgaaacgga 125  Q
    | ||||||||||||||    
T  4440872 tatattttgaaacgga 4440857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 17257804 - 17257911
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||| ||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  17257804 tacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatgtattttgaaac 17257903  T
Q  123 ggatggag 130  Q
     |||||||    
T  17257904 agatggag 17257911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 19088111 - 19088218
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||| | |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  19088111 tacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 19088210  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  19088211 ggagggag 19088218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 32414832 - 32414939
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  32414832 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatgtattttgaaac 32414931  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  32414932 ggagggag 32414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 17213937 - 17214044
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||  | |||| ||||||||||||||||   |||||||||||||||     
T  17213937 tacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatgtattttgaaat 17214036  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  17214037 ggagggag 17214044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 29790315 - 29790208
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| ||| ||||||||||||| |||| |  ||||||||||| ||| ||||||||||||||||    
T  29790315 tacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgtattttgaaac 29790216  T
Q  123 ggatggag 130  Q
     |||||||    
T  29790215 agatggag 29790208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 15383083 - 15383185
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| || |||||||||||  | |||||||||||||||||||||   ||||||||||||||||    
T  15383083 tacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttgaaac 15383182  T
Q  123 gga 125  Q
    |||    
T  15383183 gga 15383185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 22054881 - 22054779
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||| |||||||||||   ||||||||||||||||    
T  22054881 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac 22054782  T
Q  123 gga 125  Q
    |||    
T  22054781 gga 22054779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 31569179 - 31569280
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||| |||| |||| ||||||||  ||| | |||||||||||||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  31569179 tacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaac 31569278  T
Q  123 gg 124  Q
    ||    
T  31569279 gg 31569280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 18668841 - 18668948
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| ||||||| |||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  18668841 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 18668940  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  18668941 ggagggag 18668948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 20226451 - 20226550
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  20226451 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttgaaac 20226550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 22120435 - 22120534
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  22120435 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttgaaac 22120534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 25475977 - 25476068
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||  ||||||||||||||  |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||||| ||||    
T  25475977 tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacggagggag 25476068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 28477862 - 28477764
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| ||||||| ||||||||| |||| | |||||||||||| ||  |||||||||||||||    
T  28477862 tacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaaa 28477764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 15337597 - 15337493
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| ||  | ||||||||||||||    
T  15337597 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattttgaaac 15337498  T
Q  123 ggatg 127  Q
     ||||    
T  15337497 agatg 15337493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 32671925 - 32671818
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||| | || |||| ||||||||||||||||   ||||||||||||||||    
T  32671925 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 32671826  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  32671825 ggagggag 32671818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 29693992 - 29693894
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||  |||| ||||||||| ||||||||||| ||| ||||||| ||||||||| |||| | |||||||||||| ||  |||||||||||||||    
T  29693992 tacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaaa 29693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 3989442 - 3989518
Alignment:
Q  49 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||| ||||||    
T  3989442 ttagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgtaacgga 3989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 17155258 - 17155158
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| |||||||||||||||||  ||||||  |||||||| ||||||| |||| || |||||  |||||  | ||||||||||||||||    
T  17155258 tacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatagtgaacattttaaaaaaacgacatgtattttgaaac 17155159  T
Q  123 g 123  Q
    |    
T  17155158 g 17155158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 10520561 - 10520470
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||  |||||||| | |||| ||||||||||||||  | |||||| ||||||||||||||  |||||||||||||||||||| ||||    
T  10520561 tatttatacattagttaataggtatggtcaaagtaagtcaaatgaataatacacattgcaaaaattgaacatgtattttgaaacggaaggag 10520470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 5495358 - 5495252
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| |||||||||||  ||  ||||| |||   ||||||||||||||||| | |||| ||| |||| |||||| ||||    
T  5495358 tacatgctaacatttgtatttatatattagttaaaaaacatgatcaaaataaactatgtaaataatgcacatcgtaaaattgcgacatatattttaaaac 5495259  T
Q  123 ggatgga 129  Q
    |||||||    
T  5495258 ggatgga 5495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 31869817 - 31869715
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| |||||||||||  || |||||||||| | |||  |||| || |||||| ||||  || ||||||||||||||||    
T  31869817 tacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtattttgaaac 31869718  T
Q  123 gga 125  Q
    |||    
T  31869717 gga 31869715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 2360099 - 2360027
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacatt 95  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||||| | || |||||| | ||||||    
T  2360099 tacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagtacacatt 2360027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 1040933 - 1040854
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaa 102  Q
    |||||| ||| |||| ||||||||  ||||||||||||||| |||||||||| ||| || |||| |||||||||||||||    
T  1040933 tacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaa 1040854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 14214066 - 14214166
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||||||||||||| || |||||||| ||  ||||||  |||||   | |||||||||||||  |||| ||| ||||||||||| ||||    
T  14214066 tacatgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacattataaaattgcgacatgtattttaaaac 14214165  T
Q  123 g 123  Q
    |    
T  14214166 g 14214166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 21540809 - 21540880
Alignment:
Q  50 tagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||| |||||||| ||||||||||||||  | |||| ||||||||| ||||||  ||||||||||||||||    
T  21540809 tagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatgtattttgaaa 21540880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 3623863 - 3623963
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||   || | ||||||| | |||| |||| ||| |||| |||||| ||||    
T  3623863 tacatgctaacatttgtatttatatattagttaaaaa-tatggtcaaagtaaactatatgaataatgtatattgtaaaactgcgacatatattttaaaac 3623961  T
Q  123 gg 124  Q
    ||    
T  3623962 gg 3623963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 12226091 - 12226030
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtc 77  Q
    |||||| |||||||||| |||||||||||||  |||||||||||||||  ||||| ||||||    
T  12226091 aatatcttacatgctaatatttatatttatacattagttaaaaagtatgatcaaaataagtc 12226030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 20437177 - 20437274
Alignment:
Q  34 atttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||| ||||||||  |||||||||||  |||  ||||||||||||| || |||| ||||||||||||||||   ||||||||||  ||||||||||||    
T  20437177 atttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtatttgaaaacggatggag 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 10298726 - 10298798
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacatt 95  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||| |||||| ||||  |||| |||| ||||||||    
T  10298726 tacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaatagtgcacatt 10298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 24955549 - 24955629
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaat 103  Q
    |||||||||| |||| |||||||   ||||||||||| |||  ||||| ||||||| || ||||||||||||| |||||||    
T  24955549 tacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaat 24955629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 19240738 - 19240823
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 101  Q
    |||||| ||| ||| || |||| ||||||||| ||||||||||| ||| |||||| ||||| |||| |||| |  |||||||||||    
T  19240738 aatatcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 23158062 - 23158115
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 76  Q
    |||||| |||||||| ||||||||| ||||||||||| | | ||||||||||||    
T  23158062 tacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 23158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 3321706 - 3321766
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataat 88  Q
    ||||||||||||||| ||| |||||||||||| ||| ||||| |||| |||||| ||||||    
T  3321706 ctaacatttatatttgtatattagttaaaaagatatggtcaatgtaaatcatgtgaataat 3321766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 26567297 - 26567333
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaa 59  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  26567297 tacatgctaccatttatatttatatattagttaaaaa 26567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 38916404 - 38916510
Alignment:
Q  24 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||| | ||||||||||| |||||||||||||||||    
T  38916404 acatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgcaaaaatgcgacatgtattttgaaacg 38916503  T
Q  124 gatggag 130  Q
    || ||||    
T  38916504 gagggag 38916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 978186 - 978079
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  978186 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 978087  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  978086 ggagggag 978079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 8086183 - 8086290
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  8086183 tacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 8086282  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  8086283 ggagggag 8086290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 14634310 - 14634412
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| || | || ||||||||||||||||   ||||||||||||||||    
T  14634310 tacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaattggacatgtattttgaaac 14634409  T
Q  123 gga 125  Q
    |||    
T  14634410 gga 14634412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 9502780 - 9502887
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||  |||||||||||| ||||    
T  9502780 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattaaacatgtattttaaaac 9502879  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  9502880 ggagggag 9502887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 18094234 - 18094341
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  |||||||||||||||| | ||||||||| | || |||||||||||||||||||||  |||||||||||||||||    
T  18094234 tacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatgtattttgaaac 18094333  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  18094334 ggagggag 18094341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 33387329 - 33387222
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||| |||     
T  33387329 tacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaat 33387230  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  33387229 ggagggag 33387222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 3472430 - 3472530
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| |||||||   ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||    
T  3472430 tacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttgaaac 3472529  T
Q  123 g 123  Q
    |    
T  3472530 g 3472530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 12007785 - 12007892
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||  |||||| ||||||||||||||| |||||| |  |||||||| ||||||||||||||||    
T  12007785 tacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatgtattttgaaac 12007884  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  12007885 ggagggag 12007892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 18598620 - 18598546
Alignment:
Q  56 aaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18598620 aaaagtatggtcaaagtaattcatgtcaataatgcacattgcaaaaatgcgacatgtattttgaaacagatggag 18598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 27579577 - 27579681
Alignment:
Q  17 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||| | |||||| |||||  ||||||||  ||||||||||    
T  27579577 atatcttacatgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtcat-tgaataatacacatcacaaaaatgtgacatgtattt 27579675  T
Q  117 tgaaac 122  Q
    ||||||    
T  27579676 tgaaac 27579681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 33587622 - 33587729
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||  ||||||||||| ||| ||||||||||||||  | |||||||||||||||||||||   ||||||||||||||||    
T  33587622 tacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttgaaac 33587721  T
Q  123 ggatggag 130  Q
     |||||||    
T  33587722 agatggag 33587729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 39776739 - 39776641
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||| ||||| |||| |||| || ||||||||||||| | | |||||||||||||    
T  39776739 tacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaaatacgaaatgtattttgaaa 39776641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 11251227 - 11251145
Alignment:
Q  19 atcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 101  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||| |||||| ||||||| || |||| ||||||||||||||    
T  11251227 atcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 11251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 34112071 - 34111969
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||  ||||| ||||| |||||||||||||||||| || |||| |||||||||||||||    ||||||||||||||||    
T  34112071 tacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaactagacatgtattttgaaac 34111972  T
Q  123 gga 125  Q
    |||    
T  34111971 gga 34111969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 30355027 - 30355127
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| |||||||||| |||| || ||||||| ||| || |||| |||| |||||||||||   ||||||||||||||||    
T  30355027 tacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac 30355126  T
Q  123 g 123  Q
    |    
T  30355127 g 30355127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 7224274 - 7224175
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||| ||||||| ||||||||||||||  |||||| | |||||||||||||   |||||||||||| ||||    
T  7224274 tacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacattgcaaaaaatgaacatgtattttaaaac 7224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 11785895 - 11785977
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    ||||||||  |||||||||||||||  ||||||||||||| || |||| | ||||||||||||||  ||||||||||||||||    
T  11785895 tatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttgaaa 11785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 32017322 - 32017220
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| |||  ||||||||||| |||| |||| |||||||   |||| |||  |||||||||| ||||    
T  32017322 tacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacatcataaaattgcgtcatgtattttaaaac 32017223  T
Q  123 gga 125  Q
    |||    
T  32017222 gga 32017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 12456793 - 12456886
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||| ||||||||| ||||| ||| ||||||||||| |||  | ||||||||| ||||||||| ||||||||| |||| ||||| ||||||||    
T  12456793 tacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaattgcaatatgtattt 12456886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 24992294 - 24992398
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||| |||| ||||||||  ||||||||||| ||| |||||||||||  |||| |||| ||||||||| |||| |   |||||||||||||||||||    
T  24992294 atgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatgtattttgaaacgga 24992393  T
Q  126 tggag 130  Q
     ||||    
T  24992394 gggag 24992398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 40156307 - 40156200
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||| ||||||| ||| || ||||||||||| || |||| |||||||||||||| |   | ||||||||||||||    
T  40156307 tacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaagttggatatgtattttgaaac 40156208  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  40156207 ggagggag 40156200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 6996089 - 6996012
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 101  Q
    |||||| |||||||||||||||||| ||||||||||| |||||| ||| ||||| |||| |||| |||||||| |||||    
T  6996089 tacatggtaacatttatatttatatattagttaaaaaatatagttaaa-taagttatgtgaatagtgcacattacaaaa 6996012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 26387035 - 26387084
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaag 75  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  26387035 atgctaacatttatatttatatgttagttaaaaaatatgatcaaagtaag 26387084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 10696856 - 10696792
Alignment:
Q  66 tcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||||||||| | |||| ||||||||||||||  || || |||||||||||||||||||||    
T  10696856 tcaaagtaagtcatatgaatagtgcacattgcaaaatagcgacgtgtattttgaaacggatggag 10696792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 5947715 - 5947810
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgga 129  Q
    |||| |||||||||||||| |||||| ||| |||||||||||| |||| ||||||| | || |  ||||||  ||||||||||| ||| |||||||    
T  5947715 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttaaaatggatgga 5947810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 24916402 - 24916508
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtata--gtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    ||||||| |||| ||||||||  |||||||||||  |||  |||||||||||  |||| |||| | ||||||| |||| ||  |||||||||||||||||    
T  24916402 atgctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaagctatgtgaatagtacacattgtaaaattgtgacatgtattttgaaacg 24916501  T
Q  124 gatggag 130  Q
    |||||||    
T  24916502 gatggag 24916508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 3422363 - 3422429
Alignment:
Q  23 tacatgctaacatttatatttatatgttagtt---aaaaagtatagtcaaagtaagtcatgtaaata 86  Q
    ||||||||||||||| ||||||||| ||||||   ||||| |||||||||||||||| |||| ||||    
T  3422363 tacatgctaacatttgtatttatatattagttaaaaaaaaatatagtcaaagtaagttatgtgaata 3422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 20692544 - 20692641
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| |||||||||  | |||||||||||| |||||| || |||| ||  |||||||||||||||||||||  || |||||||| ||||    
T  20692544 tacatgttaatatttgtatttatat--tggttaaaaagtatggtcaaaatacgtcaagtggataatgcacattgcaaaaatgtgacgtgtattttaaaac 20692641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 9050763 - 9050825
Alignment:
Q  68 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||| | || |||| ||||| ||||||||||  |||||||||||||||||||| ||||    
T  9050763 aaagtaagttaagtgaatagtgcacgttgcaaaaattgaacatgtattttgaaacggagggag 9050825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 18998796 - 18998706
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgta 113  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||| || |||||||   |||| |||||||||  ||| |||| ||| |||||||    
T  18998796 tacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaaactatgtgaataatgcatgttgtaaaattgcgacatgta 18998706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 31197850 - 31197896
Alignment:
Q  30 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 76  Q
    |||||||| ||||||||| ||||||||||| ||| ||||||||||||    
T  31197850 taacatttgtatttatattttagttaaaaattattgtcaaagtaagt 31197896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 616892 - 616785
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  616892 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 616793  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  616792 ggagggag 616785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 623285 - 623178
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  623285 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 623186  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  623185 ggagggag 623178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 2766201 - 2766303
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||   | ||||||||||||||    
T  2766201 tacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggatatgtattttgaaac 2766300  T
Q  123 gga 125  Q
    |||    
T  2766301 gga 2766303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 18044534 - 18044427
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  18044534 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 18044435  T
Q  123 ggatggag 130  Q
    ||||||||    
T  18044434 ggatggag 18044427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 42587401 - 42587508
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  42587401 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 42587500  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  42587501 ggagggag 42587508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 3100648 - 3100750
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||   ||||||||||||||||    
T  3100648 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaattggacatgtattttgaaac 3100747  T
Q  123 gga 125  Q
    |||    
T  3100748 gga 3100750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 36642011 - 36642125
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagta-tagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||| |||| ||||||||| | |||||||||||| | |||||||||||||| || |||| ||||||||||||||||  ||||||||||||||||    
T  36642011 tacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaa 36642110  T
Q  122 cggatggagcagctt 136  Q
    |||| |||| |||||    
T  36642111 cggagggagtagctt 36642125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 40494493 - 40494391
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  40494493 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttgaaac 40494394  T
Q  123 gga 125  Q
    |||    
T  40494393 gga 40494391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 13216876 - 13216972
Alignment:
Q  25 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||| |||||||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||    
T  13216876 catgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaa 13216972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 24524198 - 24524102
Alignment:
Q  34 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||| ||||||| |||||||||||||| |  |||||||||||||||||||| ||||    
T  24524198 atttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaatttgaacatgtattttgaaacggaaggag 24524102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 6414135 - 6414225
Alignment:
Q  40 atttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| |||| |||||||||||||||||  |||| |||||| ||||||||||||    
T  6414135 atttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgtgacatttattttaaaacggatggag 6414225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 14237389 - 14237287
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  14237389 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 14237290  T
Q  123 gga 125  Q
    |||    
T  14237289 gga 14237287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 32998559 - 32998457
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  32998559 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 32998460  T
Q  123 gga 125  Q
    |||    
T  32998459 gga 32998457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 5878431 - 5878319
Alignment:
Q  17 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||| |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||||||||||||  ||||||||||    
T  5878431 atatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatg-gacatgtattt 5878333  T
Q  117 tgaaacggatggag 130  Q
     |||||||| ||||    
T  5878332 ggaaacggagggag 5878319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 38957279 - 38957175
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| |||||||| |||||||||||| ||| |||||||||| ||| || |||| ||||||||||||||||   |||| |||||||||||    
T  38957279 tacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaattggacatatattttgaaac 38957180  T
Q  123 ggatg 127  Q
    |||||    
T  38957179 ggatg 38957175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 22489433 - 22489533
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgg 128  Q
    |||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||| ||||| ||||||||||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgcattttaaaacggatgg 22489532  T
Q  129 a 129  Q
    |    
T  22489533 a 22489533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 35403609 - 35403521
Alignment:
Q  39 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 127  Q
    ||||||||  ||||||||||||||| ||||||||| |||| || |||| ||||||||||||||||   |||||||||||||||||||||    
T  35403609 tatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatg 35403521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 36167182 - 36167078
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||| |||| ||||||||  ||||| |||||||||| ||||||||||||| || |||| | |||||||||||||||  ||||||||||| |||||||    
T  36167182 atgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaatgatacatgtattttaaaacgga 36167083  T
Q  126 tggag 130  Q
     ||||    
T  36167082 gggag 36167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 41263919 - 41263821
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   | |||||||||||||    
T  41263919 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggatatgtattttgaaa 41263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 3370402 - 3370503
Alignment:
Q  16 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 115  Q
    |||||| |||||  |||||||| ||||||||| ||| ||||||| ||| ||||||||||||||||| || | | ||||||||||||| |||| |||||||    
T  3370402 aatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaaaagcaaaatgtatt 3370501  T
Q  116 tt 117  Q
    ||    
T  3370502 tt 3370503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 18090434 - 18090338
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 123  Q
    |||||||||||||||||||||| ||||||||||| |||  ||||| |||||||| |||||| ||||||||| |||||| | ||||||| ||| |||||    
T  18090434 atgctaacatttatatttatatattagttaaaaaatatgatcaaa-taagtcatataaatagtgcacattgaaaaaattcgacatgtaatttaaaacg 18090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 132126 - 132019
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||| |||  ||||||||||||| || |||| ||||| |||||||||    ||||||||||||||||    
T  132126 tacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagtggacatgtattttgaaac 132027  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  132026 ggagggag 132019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 4270245 - 4270347
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||| |||||||   ||||||||||| ||||    
T  4270245 tacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttaaaac 4270344  T
Q  123 gga 125  Q
    |||    
T  4270345 gga 4270347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 8394429 - 8394348
Alignment:
Q  49 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||||| | | |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  8394429 ttagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagggag 8394348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 33700232 - 33700334
Alignment:
Q  29 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaa-aatgcaacatgtattttgaaacggatg 127  Q
    ||||||||| ||||||||| ||||||||||| ||| |||||||||||  |||| |||| ||| ||||| |||   ||| ||||||||||||||||||| |    
T  33700232 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattgtaaattttgcgacatgtattttgaaacggagg 33700331  T
Q  128 gag 130  Q
    |||    
T  33700332 gag 33700334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 18035209 - 18035111
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 121  Q
    |||||||||||||||  |||||||| ||||||||||| ||| ||||| ||| | | ||  ||||||| |||||| |||| ||| |||| ||||||||||    
T  18035209 tacatgctaacatttgcatttatatattagttaaaaattatggtcaatgtacgccgtgcgaataatgtacattgtaaaattgcgacatatattttgaaa 18035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 5173360 - 5173259
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||| ||||||||| | |||  ||||||||| |||| | |||| | |||||||||||| |||||| | |||||| ||||    
T  5173360 tacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaattgcaacgtatattttaaaac 5173261  T
Q  123 gg 124  Q
    ||    
T  5173260 gg 5173259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 32780081 - 32780144
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaata 86  Q
    ||||| |||||||||||||||||||  |||||||||  |||||| || ||||||||||| ||||    
T  32780081 tacatactaacatttatatttatatactagttaaaatatatagttaaggtaagtcatgtgaata 32780144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 13217219 - 13217281
Alignment:
Q  68 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    ||||||||||| || |||| || |||||||||||||   ||||||||||||||||||| ||||    
T  13217219 aaagtaagtcaagtgaatagtgtacattgcaaaaattggacatgtattttgaaacggaaggag 13217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 11637891 - 11637811
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaat 103  Q
    |||||||||| | || ||||||||   |||||||||||||  |||||| ||||||| || |||| ||||||||| ||||||    
T  11637891 tacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaat 11637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 38497147 - 38497083
Alignment:
Q  68 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggagca 132  Q
    ||||||||||| || |||| ||||||||| ||||||  ||||| |||||| ||||||| ||||||    
T  38497147 aaagtaagtcaagtgaatagtgcacattgtaaaaattgaacatatattttaaaacggagggagca 38497083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 13870 - 13977
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||||||||||| || |||| |||||||| |||| ||   ||||||||||| ||||    
T  13870 tacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatattagacatgtattttaaaac 13969  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  13970 ggagggag 13977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 9433 - 9374
Alignment:
Q  71 gtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 130  Q
    |||||||| || |||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  9433 gtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagggag 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 100800 - 100907
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||||||||| |  |||||||||||||||||    
T  100800 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaagttgaacatgtattttgaaac 100899  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  100900 ggagggag 100907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 161990 - 162097
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||| |||||||| || |||| |||||||| |||||||   ||||||||||||||||    
T  161990 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatgtattttgaaac 162089  T
Q  123 ggatggag 130  Q
    ||| ||||    
T  162090 ggagggag 162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 8986 - 9090
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| | | |||||||||||| |||| ||||||||| |||| |||| ||  | ||||||| ||||||    
T  8986 tacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaac 9085  T
Q  123 ggatg 127  Q
    |||||    
T  9086 ggatg 9090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 138183 - 138287
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| ||||||||||| | | |||||||||||| |||| ||||||||| |||| |||| ||  | ||||||| |||||     
T  138183 tacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaag 138282  T
Q  123 ggatg 127  Q
    |||||    
T  138283 ggatg 138287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 67922 - 68022
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    |||||| ||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| |||||||| |||||||   ||||||||||||||||    
T  67922 tacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaattggacatgtattttgaaac 68021  T
Q  123 g 123  Q
    |    
T  68022 g 68022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 22889 - 22785
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 122  Q
    ||||||||||||||| ||||||||| | ||||||||| | | |||||| ||||| |||| ||||||||| |||| |||| ||  | ||||||| ||||||    
T  22889 tacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaac 22790  T
Q  123 ggatg 127  Q
    |||||    
T  22789 ggatg 22785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 4057 - 3964
Alignment:
Q  23 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 116  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||  |||| |||| ||| ||| | |||| | |||| |||||||    
T  4057 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcatcgtaaaattacaacttgtattt 3964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 71066 - 70963
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 125  Q
    ||||||| |||| ||||||||  ||||||||||| ||| |||||| ||||||| || |||| |||| |||||||||||   ||||||||||||||| |||    
T  71066 atgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaatgga 70968  T
Q  126 tggag 130  Q
     ||||    
T  70967 gggag 70963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 217031 - 217131
Alignment:
Q  26 atgctaacatttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 124  Q
    |||||||||||| ||||||||| ||| |||||||  ||| |||||  ||||| |||  |||| ||||||||| |||| ||| || |||||||||||||||    
T  217031 atgctaacatttgtatttatatattacttaaaaaaatatggtcaacataagttatgagaatattgcacattgtaaaattgcgacttgtattttgaaacgg 217130  T
Q  125 a 125  Q
    |    
T  217131 a 217131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University