View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15269_high_8 (Length: 221)
Name: NF15269_high_8
Description: NF15269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15269_high_8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 39529613 - 39529401
Alignment:
| Q |
9 |
ttattctacattgtctctggagtcttatgaacagagggaatagatctaaatttaaggtgtaataataatatgttgattttgattcggtgcgaaattgttt |
108 |
Q |
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| T |
39529613 |
ttattctacattgtctctggagtattatgaacagagggaatagatctaaatttaaggtgtaataataatatgttgattttgattcggtgcgaaattgttt |
39529514 |
T |
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| Q |
109 |
cgattaggaattaaactagctgattgtaaattcattctcactttactcatgcgctgaccatatcttcatgtttacgttggtgaagtgctagagtgagaag |
208 |
Q |
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| T |
39529513 |
cgattaggaattaaactagctgattgtaaattcattctcgctttactcatgcgctgaccatatcttcatgtttacgttggtgaagtgctagagtgagaag |
39529414 |
T |
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| Q |
209 |
aagagcttttatt |
221 |
Q |
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| T |
39529413 |
aagagcttttatt |
39529401 |
T |
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