View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1526_high_11 (Length: 257)
Name: NF1526_high_11
Description: NF1526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1526_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 2466479 - 2466715
Alignment:
| Q |
15 |
caaaaaatcctttccagcaacataaacctcaacagcaggaaacttcaaccaaacactctcactcacatcatctttctcaaaattacaaccaaaaaatt-g |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
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| T |
2466479 |
caaaaaatcctttccagcaacataaacctcaacagcaggaaacttcaaccaaacactctcactcacatcatctttctcaaaattacaaccaaaaaaatcg |
2466578 |
T |
|
| Q |
114 |
cggtccgaatcttcaggcaaactcaatctccaaaacatatcattcattttcacatcctcaacacctccttctttctccatctctttctcagtccttttct |
213 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
2466579 |
cggtccgaatcttcaggcaaactcaatctccaaaacatatcattcattttcacatcctcaacacctccttcttcctccatctctttctcagtccttttct |
2466678 |
T |
|
| Q |
214 |
cactcccaaaataaggatgtataagtataaccccttt |
250 |
Q |
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||||||||||||||||||||||||| ||||||||||| |
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| T |
2466679 |
cactcccaaaataaggatgtataagcataaccccttt |
2466715 |
T |
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